View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14684_high_37 (Length: 315)
Name: NF14684_high_37
Description: NF14684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14684_high_37 |
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Alignment Details
Target: chr1 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 2066606 - 2066915
Alignment:
| Q |
1 |
tcgcttaacgggcttccttcttaggaccattgtaaatcacaatccaacggtacgcacgacattttacccttgcgcatgctagacttcgccttgaaacaaa |
100 |
Q |
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| T |
2066606 |
tcgcttaacgggcttccttcttaggaccattgtaaatcacaatccaacggcacgcacgacattttacacttgcgcacgctagacttcgccttgaaacaaa |
2066705 |
T |
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| Q |
101 |
ggcaaacaaatagaaagagaaaatgttgacgaaggaatgaatatgcatgcatgcatgcatatgtttaaaaagctttccttgttttgcgtagcatcgaaat |
200 |
Q |
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| T |
2066706 |
ggcaaacaaatagaaagagaaaaagttgacgaaggaatgaatatgcatgcatgcatgcatatgtttaaaaagctttccttgttttgcgtagcatcgaaat |
2066805 |
T |
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| Q |
201 |
aaaaaagaatgaaacattttgggtagatttatttttgttcaaattggatagaaacatgttggatgggatctgcttgtgattcctttcttctcactttctt |
300 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
2066806 |
aaaaaagaatgaaacatgttgggtagatttatttttgttcaaattggatagaaacatgttggatgggatctgcttgcgattcctttcttctcactttctt |
2066905 |
T |
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| Q |
301 |
tcttttcact |
310 |
Q |
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|||||||||| |
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| T |
2066906 |
tcttttcact |
2066915 |
T |
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