View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14684_high_62 (Length: 214)
Name: NF14684_high_62
Description: NF14684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14684_high_62 |
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Alignment Details
Target: chr1 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 25177084 - 25176899
Alignment:
| Q |
15 |
cacagacaaaagccacatcaaaacatagcaaccaaaaatggaccaagaaaaccccaacccaccatcagaacaaccctcaaaacgtagcacaagatgttgt |
114 |
Q |
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|||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25177084 |
cacaaacaaaagccacatcaaaatatagcaaccacaaatggaccaagaaaaccccaacccaccatcagaacaaccctcaaaacgtagcacaagatgttgt |
25176985 |
T |
|
| Q |
115 |
ttctgtctctaccgtgtcttatggataattcttgtcacaattatcatccttgtttccctcatcatcctcgttatatacatcataat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25176984 |
ttctgtctctaccgtgtcttatggataattcttgtcacaattatcatccttgtttccctcatcatcctcgttatatacatcataat |
25176899 |
T |
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