View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14684_low_28 (Length: 368)

Name: NF14684_low_28
Description: NF14684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14684_low_28
NF14684_low_28
[»] chr8 (24 HSPs)
chr8 (1-368)||(6296373-6296739)
chr8 (153-270)||(6282194-6282311)
chr8 (5-109)||(5033187-5033291)
chr8 (5-109)||(5667123-5667227)
chr8 (6-109)||(35440978-35441081)
chr8 (5-107)||(4958627-4958728)
chr8 (5-109)||(33841599-33841703)
chr8 (5-108)||(10086784-10086887)
chr8 (26-118)||(34541832-34541924)
chr8 (54-118)||(39850972-39851036)
chr8 (26-133)||(31159861-31159960)
chr8 (73-136)||(8243387-8243450)
chr8 (42-97)||(8796460-8796515)
chr8 (46-97)||(34229679-34229730)
chr8 (73-137)||(34541801-34541865)
chr8 (5-109)||(45191135-45191239)
chr8 (42-97)||(8243433-8243488)
chr8 (62-109)||(43844534-43844581)
chr8 (100-138)||(5033273-5033311)
chr8 (73-135)||(34229717-34229779)
chr8 (100-137)||(33841580-33841617)
chr8 (73-109)||(5033237-5033273)
chr8 (287-339)||(6282112-6282164)
chr8 (73-109)||(35440995-35441031)
[»] chr2 (23 HSPs)
chr2 (5-122)||(38933600-38933717)
chr2 (26-137)||(2828582-2828693)
chr2 (5-122)||(6217232-6217349)
chr2 (5-136)||(14229361-14229491)
chr2 (5-109)||(6721977-6722081)
chr2 (44-136)||(2893962-2894054)
chr2 (5-119)||(37961722-37961836)
chr2 (5-109)||(16514450-16514554)
chr2 (42-120)||(29925615-29925693)
chr2 (26-109)||(15011306-15011389)
chr2 (68-122)||(2143943-2143997)
chr2 (5-98)||(14470600-14470693)
chr2 (5-109)||(29508698-29508803)
chr2 (5-98)||(14892298-14892390)
chr2 (73-122)||(15011356-15011405)
chr2 (100-138)||(38933699-38933737)
chr2 (84-133)||(14464557-14464606)
chr2 (100-129)||(33018657-33018686)
chr2 (85-122)||(37762014-37762051)
chr2 (84-116)||(2828671-2828703)
chr2 (35-107)||(8534174-8534246)
chr2 (73-109)||(16514500-16514536)
chr2 (5-105)||(24115950-24116050)
[»] chr5 (30 HSPs)
chr5 (42-136)||(26662398-26662492)
chr5 (42-136)||(26933993-26934087)
chr5 (6-122)||(3899852-3899968)
chr5 (5-122)||(16971157-16971274)
chr5 (5-136)||(28818916-28819047)
chr5 (5-109)||(29699393-29699497)
chr5 (5-122)||(2953211-2953320)
chr5 (5-122)||(2093945-2094062)
chr5 (5-109)||(19655184-19655288)
chr5 (33-121)||(38134409-38134497)
chr5 (42-109)||(16439164-16439231)
chr5 (1-109)||(291123-291231)
chr5 (5-109)||(12913829-12913933)
chr5 (35-109)||(3180098-3180172)
chr5 (73-122)||(16439214-16439263)
chr5 (84-136)||(3180059-3180111)
chr5 (42-138)||(16802441-16802537)
chr5 (26-109)||(19598358-19598440)
chr5 (5-122)||(2356288-2356401)
chr5 (73-137)||(6912295-6912359)
chr5 (74-138)||(16802521-16802585)
chr5 (84-136)||(19598418-19598470)
chr5 (89-122)||(6912355-6912388)
chr5 (100-137)||(16971256-16971293)
chr5 (73-109)||(2093963-2093999)
chr5 (100-140)||(2356383-2356423)
chr5 (100-136)||(2953302-2953338)
chr5 (73-109)||(3899915-3899951)
chr5 (73-109)||(16971220-16971256)
chr5 (1-97)||(30117832-30117928)
[»] chr7 (24 HSPs)
chr7 (5-122)||(42628308-42628425)
chr7 (5-109)||(11016895-11016999)
chr7 (26-122)||(29053343-29053439)
chr7 (26-111)||(7671940-7672025)
chr7 (85-138)||(41018225-41018278)
chr7 (26-109)||(41018257-41018340)
chr7 (16-109)||(15027568-15027661)
chr7 (9-97)||(4290583-4290671)
chr7 (5-97)||(38975843-38975935)
chr7 (87-136)||(45231853-45231902)
chr7 (62-122)||(4649333-4649393)
chr7 (42-109)||(27028838-27028905)
chr7 (54-109)||(22764757-22764812)
chr7 (26-109)||(34854724-34854807)
chr7 (42-108)||(10419485-10419551)
chr7 (100-138)||(11016981-11017019)
chr7 (73-135)||(34854695-34854757)
chr7 (55-109)||(45231908-45231962)
chr7 (5-103)||(48000769-48000867)
chr7 (84-133)||(27028795-27028844)
chr7 (84-132)||(4649409-4649457)
chr7 (73-109)||(15027618-15027654)
chr7 (82-118)||(30165332-30165368)
chr7 (100-136)||(42628407-42628443)
[»] chr4 (35 HSPs)
chr4 (33-130)||(40789184-40789281)
chr4 (5-122)||(42375023-42375140)
chr4 (5-114)||(53954631-53954740)
chr4 (6-109)||(51265471-51265574)
chr4 (5-109)||(23444277-23444381)
chr4 (5-109)||(47661868-47661972)
chr4 (26-122)||(52028562-52028658)
chr4 (5-109)||(6271728-6271832)
chr4 (42-122)||(47404630-47404710)
chr4 (42-122)||(55090041-55090121)
chr4 (84-137)||(31430459-31430512)
chr4 (5-109)||(35682192-35682296)
chr4 (73-137)||(50384103-50384167)
chr4 (9-108)||(47762635-47762734)
chr4 (26-133)||(24006099-24006198)
chr4 (73-138)||(47404582-47404647)
chr4 (46-109)||(30861823-30861886)
chr4 (73-140)||(40789255-40789322)
chr4 (73-136)||(24006069-24006132)
chr4 (26-80)||(50384134-50384188)
chr4 (82-136)||(54716348-54716402)
chr4 (42-122)||(38714836-38714916)
chr4 (73-121)||(52028625-52028673)
chr4 (42-109)||(31532734-31532801)
chr4 (35-115)||(45591448-45591520)
chr4 (42-107)||(26186061-26186124)
chr4 (88-133)||(28693925-28693970)
chr4 (105-138)||(34176246-34176279)
chr4 (100-137)||(44379919-44379956)
chr4 (73-122)||(55090009-55090058)
chr4 (84-112)||(17285817-17285845)
chr4 (73-109)||(23444295-23444331)
chr4 (100-136)||(42375122-42375158)
chr4 (5-57)||(44379938-44379990)
chr4 (73-109)||(47661918-47661954)
[»] scaffold0586 (1 HSPs)
scaffold0586 (5-109)||(7055-7159)
[»] chr6 (12 HSPs)
chr6 (5-133)||(24618609-24618737)
chr6 (5-122)||(12343113-12343230)
chr6 (26-122)||(10521878-10521974)
chr6 (55-136)||(31654304-31654385)
chr6 (42-136)||(2315349-2315443)
chr6 (42-109)||(551210-551277)
chr6 (42-108)||(24587488-24587554)
chr6 (84-133)||(10521851-10521900)
chr6 (5-109)||(17750928-17751032)
chr6 (100-136)||(24618591-24618627)
chr6 (92-122)||(13766751-13766781)
chr6 (5-90)||(13043502-13043587)
[»] chr1 (45 HSPs)
chr1 (26-122)||(46333975-46334071)
chr1 (1-108)||(17127568-17127675)
chr1 (5-109)||(32540756-32540860)
chr1 (42-134)||(47303396-47303488)
chr1 (5-109)||(48993925-48994029)
chr1 (26-109)||(37155072-37155155)
chr1 (42-122)||(8337896-8337976)
chr1 (5-133)||(15220813-15220941)
chr1 (42-122)||(29371381-29371461)
chr1 (73-138)||(1819486-1819551)
chr1 (5-105)||(5995399-5995499)
chr1 (5-109)||(29179605-29179709)
chr1 (5-129)||(33219579-33219703)
chr1 (42-122)||(34062222-34062302)
chr1 (5-122)||(49444921-49445036)
chr1 (42-109)||(1091589-1091656)
chr1 (42-109)||(4609022-4609089)
chr1 (42-112)||(741547-741617)
chr1 (33-122)||(38674541-38674628)
chr1 (75-136)||(48823884-48823945)
chr1 (61-109)||(21630068-21630116)
chr1 (73-137)||(46333944-46334008)
chr1 (46-105)||(9157340-9157399)
chr1 (42-109)||(45728313-45728380)
chr1 (73-135)||(28928779-28928841)
chr1 (64-109)||(28395663-28395708)
chr1 (86-122)||(19711193-19711229)
chr1 (84-120)||(34062296-34062332)
chr1 (42-114)||(48604992-48605064)
chr1 (100-139)||(29179584-29179623)
chr1 (46-109)||(36290456-36290519)
chr1 (42-109)||(44706829-44706896)
chr1 (73-139)||(4609072-4609138)
chr1 (86-136)||(48498504-48498553)
chr1 (73-137)||(741500-741564)
chr1 (87-122)||(36290428-36290463)
chr1 (42-80)||(1819534-1819572)
chr1 (75-133)||(9157388-9157446)
chr1 (84-118)||(37155133-37155167)
chr1 (84-138)||(48604944-48604998)
chr1 (73-122)||(38674518-38674567)
chr1 (73-109)||(33219649-33219685)
chr1 (100-136)||(48993907-48993943)
chr1 (73-109)||(48993943-48993979)
chr1 (100-136)||(49444903-49444939)
[»] chr3 (26 HSPs)
chr3 (42-133)||(47677300-47677391)
chr3 (5-117)||(1801454-1801566)
chr3 (5-109)||(51046081-51046185)
chr3 (26-118)||(30476503-30476595)
chr3 (11-103)||(47492061-47492153)
chr3 (42-133)||(29031759-29031850)
chr3 (5-108)||(30580764-30580867)
chr3 (42-109)||(30734447-30734514)
chr3 (26-97)||(33689214-33689285)
chr3 (55-127)||(39385746-39385818)
chr3 (5-109)||(41752990-41753094)
chr3 (73-136)||(33689252-33689315)
chr3 (73-136)||(43139708-43139771)
chr3 (5-107)||(50524730-50524832)
chr3 (35-109)||(50550001-50550075)
chr3 (84-136)||(49414510-49414562)
chr3 (42-109)||(43139754-43139821)
chr3 (68-122)||(1801566-1801620)
chr3 (42-112)||(49418736-49418806)
chr3 (73-122)||(47677268-47677317)
chr3 (82-135)||(49418691-49418744)
chr3 (84-130)||(18321738-18321784)
chr3 (73-139)||(29031710-29031776)
chr3 (100-136)||(1272561-1272597)
chr3 (73-133)||(30476476-30476536)
chr3 (100-136)||(45103099-45103135)
[»] scaffold0047 (2 HSPs)
scaffold0047 (26-122)||(63770-63866)
scaffold0047 (73-118)||(63833-63878)
[»] scaffold0016 (2 HSPs)
scaffold0016 (5-122)||(49711-49828)
scaffold0016 (99-138)||(49691-49730)
[»] scaffold0161 (1 HSPs)
scaffold0161 (5-109)||(27228-27332)
[»] scaffold0481 (1 HSPs)
scaffold0481 (84-122)||(2900-2938)
[»] scaffold1033 (2 HSPs)
scaffold1033 (73-133)||(2289-2349)
scaffold1033 (42-80)||(2268-2306)
[»] scaffold1029 (2 HSPs)
scaffold1029 (73-133)||(2289-2349)
scaffold1029 (42-80)||(2268-2306)


Alignment Details
Target: chr8 (Bit Score: 315; Significance: 1e-177; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 368
Target Start/End: Complemental strand, 6296739 - 6296373
Alignment:
Q  1 tgatatagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtc 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  6296739 tgatatagagttggatgacattagtgacattagtcaattataatgtcacaatacttgtgaaagagagagaaacacaagcattatgacattgtgattggtc 6296640  T
Q  101 aatgtcacccaactctatgtcattcaagtgctacccgttggttccttcaaagttcaaacgaataataggcatcgatttacatcttagaagtcattgattc 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6296639 aatgtcacccaactctatgtcatccaagtgctacccgttggttccttcaaagttcaa-cgaataataggcatcgatttacatcttagaagtcattgattc 6296541  T
Q  201 aaaggctgttcaaaccnnnnnnnatggaagtaaaaattattgtgaaagtgtttgcttatgatcaagtttagttttttatattatctggccgcctaaaagt 300  Q
    ||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6296540 aaaggctgttcaaacctttttttatggaagtaaaaattattgtgaaagtgtttgcttatgatcaagtttagttttttatattatctggccacctaaaagt 6296441  T
Q  301 tataccaatgatttcacagttgctatgtcatgcactcctattctaccaaacgtcaagaacccaaaatg 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6296440 tataccaatgatttcacagttgctatgtcatgcactcctattctaccaaacgtcaagaacccaaaatg 6296373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 6282311 - 6282194
Alignment:
Q  153 ttcaaacgaataataggcatcgatttacatcttagaagtcattgattcaaaggctgttcaaaccnnnnnnnatggaagtaaaaattattgtgaaagtgtt 252  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||       | | |||||||||||||||||||||||||    
T  6282311 ttcaaacgaataataggcatcgattcacatcttagaattcattgattcacaggttgttcaaacctttatttaggaaagtaaaaattattgtgaaagtgtt 6282212  T
Q  253 tgcttatgatcaagttta 270  Q
    |||||||||| |||||||    
T  6282211 tgcttatgataaagttta 6282194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 5033291 - 5033187
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||  ||||| | ||||||||||| |||||| |||||||||||||||||||| | || ||||||||||||||||||    
T  5033291 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 5033192  T
Q  105 tcacc 109  Q
    |||||    
T  5033191 tcacc 5033187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 5667227 - 5667123
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||| ||||||||| | |||||| |||||||| ||||||| ||| |||||| |||||||||||| ||||||| | ||||||||||||||  |||||    
T  5667227 atagagtttgatgacattggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattgtgacattgtgattgaccaatg 5667128  T
Q  105 tcacc 109  Q
    |||||    
T  5667127 tcacc 5667123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 35440978 - 35441081
Alignment:
Q  6 tagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgt 105  Q
    ||||||||| ||||||| | ||||||  ||||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||| ||||||    
T  35440978 tagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 35441077  T
Q  106 cacc 109  Q
    ||||    
T  35441078 cacc 35441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 4958728 - 4958627
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||| ||||| ||||| ||||||  ||||| | || ||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||    
T  4958728 atagagttagatgatattagtgacattgaccaatcacaa-gtcacaatacttgtgaaagagagagaaacacaaacattatgacattgtgattggccaatg 4958630  T
Q  105 tca 107  Q
    |||    
T  4958629 tca 4958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 33841599 - 33841703
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||  ||||| | | ||||||||| |||||| |||||||||||||||||||| | || |||| |||||||||||||    
T  33841599 atagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattctgattggtcaatg 33841698  T
Q  105 tcacc 109  Q
    |||||    
T  33841699 tcacc 33841703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 10086887 - 10086784
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||  ||||| | |||||||||||  ||||| ||||||||||||||||| || ||||||||||||||||  |||||    
T  10086887 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattgaccaatg 10086788  T
Q  105 tcac 108  Q
    ||||    
T  10086787 tcac 10086784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 34541832 - 34541924
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctat 118  Q
    |||||| |||||| ||||| ||||||| |||||| |||||||||||||||||||| | || |||| || | |||||||||||| |||||||||    
T  34541832 gacattggccaatcataatatcacaatgcttgtgaaagagagagaaacacaagcattgtggcattttgctaggtcaatgtcactcaactctat 34541924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 39851036 - 39850972
Alignment:
Q  54 cttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctat 118  Q
    |||||| ||||||||||||||||| || | || |||||||||||| |||||||||||||||||||    
T  39851036 cttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctat 39850972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 31159960 - 31159861
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattc 125  Q
    |||||| |||||| ||||||||||||| |||||| |||||||||||||| ||        | |||||||||| |||||||||||||| | ||||||| ||    
T  31159960 gacattcgccaatcataatgtcacaatgcttgtgaaagagagagaaacaaaa--------atattgtgattgatcaatgtcacccaattttatgtcactc 31159869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 8243450 - 8243387
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||| | || ||||||||||| |||||||||| |||||||||||||  ||||||||||||    
T  8243450 cacaagcattgtggcattgtgattgatcaatgtcactcaactctatgtcacccaagtgctaccc 8243387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 8796515 - 8796460
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattg 97  Q
    ||||||||||| |||||| |||| ||||||||||||||| | ||||||||||||||    
T  8796515 aatgtcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgattg 8796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 34229730 - 34229679
Alignment:
Q  46 tcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattg 97  Q
    ||||||| |||||| |||||||||||||||||||| | ||||||||||||||    
T  34229730 tcacaatgcttgtgaaagagagagaaacacaagcattctgacattgtgattg 34229679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 34541865 - 34541801
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccg 137  Q
    |||||||| | ||| ||| ||||||| ||||||||||||||| |||||||  |||||||||||||    
T  34541865 cacaagcattgtgatattatgattggccaatgtcacccaactttatgtcacccaagtgctacccg 34541801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 45191135 - 45191239
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||||||| ||| | ||||||    ||| | |||| |||||| ||| || ||||||||||||||||| || | | ||||| |||||||||||||    
T  45191135 atagagttggatgatattggtgacattgattaatcacaatgccacaatgcttatgaaagagagagaaacacaaacattgtaacattttgattggtcaatg 45191234  T
Q  105 tcacc 109  Q
    |||||    
T  45191235 tcacc 45191239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 8243433 - 8243488
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattg 97  Q
    |||| |||||| |||||| |||||||||||||||||||| | || |||||||||||    
T  8243433 aatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 8243488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 43844534 - 43844581
Alignment:
Q  62 agagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||||||||||||||| | |||||||||||||| ||||| |||||    
T  43844534 agagagagaaacacaagcattgtgacattgtgattgatcaatatcacc 43844581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 5033273 - 5033311
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  5033273 caatgtcacccaactctatgtcacccaagtgctacccgt 5033311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 34229717 - 34229779
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacc 135  Q
    |||||||| | ||| ||||||||||  |||||||||| ||||||||||||  |||||||||||    
T  34229717 cacaagcattgtgatattgtgattgaccaatgtcacctaactctatgtcacacaagtgctacc 34229779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 33841617 - 33841580
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctacccg 137  Q
    |||||||||||||||||||||||  |||||||||||||    
T  33841617 caatgtcacccaactctatgtcacccaagtgctacccg 33841580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 5033237 - 5033273
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  5033237 cacaagcattgtgacattgtgattggtcaatgtcacc 5033273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 6282164 - 6282112
Alignment:
Q  287 ggccgcctaaaagttataccaatgatttcacagttgctatgtcatgcactcct 339  Q
    |||| |||||||||||||| || |  ||||||||||||| |||||||||||||    
T  6282164 ggccacctaaaagttatactaacgccttcacagttgctaagtcatgcactcct 6282112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 35441031 - 35440995
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  35441031 cacaagcattgtgacattgtgattggtcaatgtcacc 35440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 7e-34; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 38933717 - 38933600
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||| || |||||| ||||||||||||| |||||| |||||||||||||||||||| | || ||||||||||||||||||    
T  38933717 atagagttgggtgacattggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 38933618  T
Q  105 tcacccaactctatgtca 122  Q
    ||||||||||||||||||    
T  38933617 tcacccaactctatgtca 38933600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 2828693 - 2828582
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattc 125  Q
    |||||| |||||| | ||||||||||| ||| || |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||       
T  2828693 gacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcattttgacattgtgattggccaatgtcacccaactctatgtcacag 2828594  T
Q  126 aagtgctacccg 137  Q
    ||||||||||||    
T  2828593 aagtgctacccg 2828582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 6217232 - 6217349
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | |||||| |||||| | |||| |||||| |||||| ||||||||||||||||| || | || |||||||||||| |||||    
T  6217232 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatg 6217331  T
Q  105 tcacccaactctatgtca 122  Q
    ||||||||||||||||||    
T  6217332 tcacccaactctatgtca 6217349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 14229361 - 14229491
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||| | ||||||| | |||||| | |||| | ||||||||||| |||||| |||||||||||||||||||| | ||||||||||||| | |||||    
T  14229361 atagagttcggtgacattggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatt-gccaatg 14229459  T
Q  105 tcacccaactctatgtcattcaagtgctaccc 136  Q
    ||| ||||||||||||||  ||||||||||||    
T  14229460 tcatccaactctatgtcacccaagtgctaccc 14229491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 6722081 - 6721977
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||||| || ||| |||||| | |||||||||||  ||||| |||||||||||||||||||| | ||| |||||||||||||||||    
T  6722081 atagagttggttgacattagtgatattggccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatg 6721982  T
Q  105 tcacc 109  Q
    |||||    
T  6721981 tcacc 6721977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 2894054 - 2893962
Alignment:
Q  44 tgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    ||||||||| |||||| |||||||||||| ||||||| | ||| ||||||||||| |||||||||||||||||||||||  |||||| |||||    
T  2894054 tgtcacaatgcttgtgaaagagagagaaatacaagcattgtgagattgtgattggccaatgtcacccaactctatgtcacccaagtgttaccc 2893962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 37961836 - 37961722
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||  ||| ||| | ||||||  ||||| | |||| |||||| |||||| ||||||||||||||||| || |||| ||||||||| ||||||||    
T  37961836 atagagttgagtgatatttgtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattatggcattgtgatcggtcaatg 37961737  T
Q  105 tcacccaactctatg 119  Q
    |||||||||||||||    
T  37961736 tcacccaactctatg 37961722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 16514554 - 16514450
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||| ||| | ||||||  ||||| | ||||||||||| |||||| |||||||||||||||||||| |||| ||| |||||||| |||||    
T  16514554 atagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattatggcatagtgattggccaatg 16514455  T
Q  105 tcacc 109  Q
    |||||    
T  16514454 tcacc 16514450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 29925615 - 29925693
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgt 120  Q
    ||||||| ||| |||||| ||||||||||||||||| || | || |||||||||||| |||||||||||||||||||||    
T  29925615 aatgtcagaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgt 29925693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 15011389 - 15011306
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||| |||||| | ||||||||||| |||||| ||||||||||||||||| || | || |||||||||||| |||| |||||    
T  15011389 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatatcacc 15011306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 2143943 - 2143997
Alignment:
Q  68 agaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    ||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||    
T  2143943 agaaacacaagcattatgacattgtgattggccaacgtcactcaactctatgtca 2143997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 14470600 - 14470693
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattgg 98  Q
    |||||||||| ||||||| | ||||||  ||||| | |||||  |||| |||||| ||||||||||||||||| || | |||||||||||||||    
T  14470600 atagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgg 14470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 29508698 - 29508803
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataa-tgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaat 103  Q
    |||||||||| ||||||| | ||||||  ||||| | || || |||||| |||||| |||||||||||||||||||| |  | |||||||||||| ||||    
T  29508698 atagagttgggtgacattggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaat 29508797  T
Q  104 gtcacc 109  Q
    ||||||    
T  29508798 gtcacc 29508803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 14892390 - 14892298
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattgg 98  Q
    |||||||||||||||||| | ||||||   |||| | ||||| ||||||||| || |||||||||||| |||| | || |||||||||||||||    
T  14892390 atagagttggatgacattggtgacattgatcaatcacaatgttacaatacttatgaaagagagagaaagacaaac-atgtgacattgtgattgg 14892298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 15011356 - 15011405
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||||    
T  15011356 cacaagcattgtgacattgtgattggccaatgtcactcaactctatgtca 15011405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 38933699 - 38933737
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  38933699 caatgtcacccaactctatgtcacccaagtgctacccgt 38933737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 14464606 - 14464557
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    ||||||||||||||  ||||||||| |||||||||||||  |||||||||    
T  14464606 tgacattgtgattgaccaatgtcactcaactctatgtcacacaagtgcta 14464557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 129
Target Start/End: Original strand, 33018657 - 33018686
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagt 129  Q
    ||||||||||||||||||||||||||||||    
T  33018657 caatgtcacccaactctatgtcattcaagt 33018686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 37762051 - 37762014
Alignment:
Q  85 gacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  37762051 gacattgtgattggtcaatgtcactcaactctacgtca 37762014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 2828671 - 2828703
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactct 116  Q
    ||||||||||||||| |||||||||||||||||    
T  2828671 tgacattgtgattggccaatgtcacccaactct 2828703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 8534246 - 8534174
Alignment:
Q  35 caattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtca 107  Q
    |||||| ||||||||||| |||||| || ||||||||||||||  | | | ||||||| |||| |||||||||    
T  8534246 caattacaatgtcacaattcttgtgaaatagagagaaacacaaatatttttacattgtaattgatcaatgtca 8534174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 16514500 - 16514536
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  16514500 cacaagcattgtgacattgtgattggtcaatgtcacc 16514536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 24116050 - 24115950
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| || |||||| || ||| | |||| | |||||| |||| |||||| ||||| | |||||||| ||| | | ||||||||||||| |||||    
T  24116050 atagagttgggtgccattagtgatattggtcaatcacaatgtcgcaatgcttgtgaaagagtgtgaaacacaggcattgtaacattgtgattggccaatg 24115951  T
Q  105 t 105  Q
    |    
T  24115950 t 24115950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 26662492 - 26662398
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  26662492 aatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatgtcacccaactctatgtcacacaagtgctaccc 26662398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 26934087 - 26933993
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  26934087 aatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatgtcacccaactctatgtcacacaagtgctaccc 26933993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 3899968 - 3899852
Alignment:
Q  6 tagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgt 105  Q
    ||||||||| ||||||| | ||||||  ||||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||| ||||||    
T  3899968 tagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 3899869  T
Q  106 cacccaactctatgtca 122  Q
    |||||||||||||||||    
T  3899868 cacccaactctatgtca 3899852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 16971274 - 16971157
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||  ||||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||| |||||    
T  16971274 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 16971175  T
Q  105 tcacccaactctatgtca 122  Q
    |||||||| |||||||||    
T  16971174 tcacccaagtctatgtca 16971157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 28819047 - 28818916
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||  ||| ||| | |||||| | |||| ||||||||||||| |||||| |||||||||||| ||||| | | ||||||||||||||  |||||    
T  28819047 atagagttgagtgatattggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaagtattgtgacattgtgattgaccaatg 28818948  T
Q  105 tcacccaactctatgtcattcaagtgctaccc 136  Q
    ||||||||||||||||||  ||||||||||||    
T  28818947 tcacccaactctatgtcacccaagtgctaccc 28818916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 29699497 - 29699393
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||| ||| | |||||| |||||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||| |||||    
T  29699497 atagagttgggtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 29699398  T
Q  105 tcacc 109  Q
    |||||    
T  29699397 tcacc 29699393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 2953320 - 2953211
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | |||||| |||||| | ||||||||||| |||||| ||||||||||||||||||        |||||||||||  |||||    
T  2953320 atagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaag--------cattgtgattgaccaatg 2953229  T
Q  105 tcacccaactctatgtca 122  Q
    ||||||||||||||||||    
T  2953228 tcacccaactctatgtca 2953211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 2093945 - 2094062
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||| ||| | ||||||   |||| | ||||||| ||| |||||| |||||||||||||||||||| ||||| | ||||||| ||||||     
T  2093945 atagagttgggtgatattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattatgatagtgtgattagtcaata 2094044  T
Q  105 tcacccaactctatgtca 122  Q
    |||||||| |||||||||    
T  2094045 tcacccaattctatgtca 2094062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 19655288 - 19655184
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||  ||||||| | ||||||  ||||| | ||||||||||| |||||| ||||||||||||||||| || | || |||||||||||| |||||    
T  19655288 atagagttgagtgacattggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatg 19655189  T
Q  105 tcacc 109  Q
    |||||    
T  19655188 tcacc 19655184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 38134409 - 38134497
Alignment:
Q  33 gccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtc 121  Q
    |||||| | ||||||||||| || ||| |||||| ||||||||||||| | ||||||||||||||| |||| ||| |||||||||||||    
T  38134409 gccaatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcattgtgacattgtgattggccaatatcatccaactctatgtc 38134497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 16439231 - 16439164
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||  ||||||||||    
T  16439231 aatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcacc 16439164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 291231 - 291123
Alignment:
Q  1 tgatatagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtc 100  Q
    |||||||||||||| ||||||| | ||||||   |||| | |||||||||||  ||||| |||||| ||||| ||||||| | || |||||||||||| |    
T  291231 tgatatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgtgattggcc 291132  T
Q  101 aatgtcacc 109  Q
    |||||||||    
T  291131 aatgtcacc 291123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 12913933 - 12913829
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | || ||| | |||| | ||||||| ||| |||||| |||||||||| ||||||| | | ||||||||||||||| |||||    
T  12913933 atagagttgggtgacattggtgatattggtcaatcacaatgtcataatgcttgtgaaagagagagatacacaagaattgtgacattgtgattggccaatg 12913834  T
Q  105 tcacc 109  Q
    |||||    
T  12913833 tcacc 12913829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 3180098 - 3180172
Alignment:
Q  35 caattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||| |||||||||||||  ||||| |||||||||||||||||||| | || |||||||||||  ||||||||||    
T  3180098 caatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcacc 3180172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 16439214 - 16439263
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||||    
T  16439214 cacaagcattgtgacattgtgattgatcaatgtcacccaactctatgtca 16439263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 3180111 - 3180059
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    ||||||| |||||| ||||||||||||||||||||||||  ||||||||||||    
T  3180111 tgacattatgattgatcaatgtcacccaactctatgtcacacaagtgctaccc 3180059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 16802537 - 16802441
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    ||||||||||| |||||  |||||||||||||||||  | | | ||||||||||||| ||||||||||||| | ||||| |   |||||||||||||    
T  16802537 aatgtcacaatgcttgtaaaagagagagaaacacaaatattgttacattgtgattggccaatgtcacccaaatttatgttacctaagtgctacccgt 16802441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 19598440 - 19598358
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||| ||||| ||||||||| ||| |||||| |||||||||||||||||||| | ||  ||||||||||  ||||||||||    
T  19598440 gacattaaccaatcataatgtca-aatgcttgtgaaagagagagaaacacaagcattgtggtattgtgattgaccaatgtcacc 19598358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 2356401 - 2356288
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||||||||||| | |||||| |||||| | | ||||||||| ||| || ||||||||  |||||||||| ||| ||||||| ||||   ||||    
T  2356401 atagagttggatgacattggtgacattggccaatcaca-tgtcacaatgcttatgaaagagaga--aacacaagcattataacattgtaattgcctaatg 2356305  T
Q  105 tcacccaactctatgtca 122  Q
    ||| ||||||||||||||    
T  2356304 tca-ccaactctatgtca 2356288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 6912359 - 6912295
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccg 137  Q
    |||||||| | ||||||||||||||   ||||||| | ||||||||||||| |||||||||||||    
T  6912359 cacaagcattgtgacattgtgattgactaatgtcaactaactctatgtcatacaagtgctacccg 6912295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 16802521 - 16802585
Alignment:
Q  74 acaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    ||||||| | ||||||| ||||||||||||||||| ||||||||| ||| | |||||||| ||||    
T  16802521 acaagcattgtgacattctgattggtcaatgtcactcaactctatatcacttaagtgctatccgt 16802585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 19598418 - 19598470
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    ||||||| |||||||| ||||||||||||||||||||||  |||||| |||||    
T  19598418 tgacattatgattggttaatgtcacccaactctatgtcacccaagtgttaccc 19598470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 6912355 - 6912388
Alignment:
Q  89 ttgtgattggtcaatgtcacccaactctatgtca 122  Q
    ||||||||||||||||||||| ||||||||||||    
T  6912355 ttgtgattggtcaatgtcaccaaactctatgtca 6912388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 16971256 - 16971293
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctacccg 137  Q
    |||||||||||||||||||||||  |||||||||||||    
T  16971256 caatgtcacccaactctatgtcacccaagtgctacccg 16971293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 2093999 - 2093963
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| |||||||||||||||| |||||||||||    
T  2093999 cacaagcattatgacattgtgattgatcaatgtcacc 2093963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 2356383 - 2356423
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctacccgttg 140  Q
    |||||||| ||||||||||||||  ||||||||||||||||    
T  2356383 caatgtcatccaactctatgtcacacaagtgctacccgttg 2356423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 2953302 - 2953338
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||||||||  ||||||||||||    
T  2953302 caatgtcacccaactctatgtcacccaagtgctaccc 2953338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 3899915 - 3899951
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  3899915 cacaagcattgtgacattgtgattggtcaatgtcacc 3899951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 16971220 - 16971256
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  16971220 cacaagcattgtgacattgtgattggtcaatgtcacc 16971256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30117832 - 30117928
Alignment:
Q  1 tgatatagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattg 97  Q
    |||||||||||||| ||||||| | || |||  ||||| | |||||||||||  || || || ||||||||||||||||| | || |||| ||||||    
T  30117832 tgatatagagttgggtgacattggtgatattgaccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcattgtggcattatgattg 30117928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 42628425 - 42628308
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | || ||| |||||| | |||||| |||| |||||| |||||||||||||| ||||| | || ||||||||||||||||||    
T  42628425 atagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatg 42628326  T
Q  105 tcacccaactctatgtca 122  Q
    ||||||||||||||||||    
T  42628325 tcacccaactctatgtca 42628308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 11016999 - 11016895
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||  ||||| | |||||||||||  ||||| |||||||||||||||||||| | || |||||||||||| |||||    
T  11016999 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 11016900  T
Q  105 tcacc 109  Q
    |||||    
T  11016899 tcacc 11016895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 29053343 - 29053439
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||| |||||| | |||| | |||| |||||| ||||||||||||||||| || | || |||||||||||| |||||||||||||||||||||||    
T  29053343 gacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtca 29053439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 7671940 - 7672025
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcaccca 111  Q
    ||||||||||||| | |||| |||||| |||||| ||||||||||||||||| || | || |||||||||||| ||||||||||||    
T  7671940 gacattagccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcaccca 7672025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 41018278 - 41018225
Alignment:
Q  85 gacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  41018278 gacattgtgattggccaatgtcacccaactctatgtcatccaagtgctacccgt 41018225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 41018257 - 41018340
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||| |||||| | |||||| |||| |||||| |||||||||||||| ||||| | || |||||||||||||||||||||||    
T  41018257 gacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcacc 41018340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 15027661 - 15027568
Alignment:
Q  16 tgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||| | ||||||  ||||| | ||||||||||| |||||| ||||||||||||||||| || | ||  ||||||||||||||||||||||    
T  15027661 tgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggtattgtgattggtcaatgtcacc 15027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 4290671 - 4290583
Alignment:
Q  9 agttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattg 97  Q
    |||||| ||||||| | |||||| |||||| | ||||||||||| |||||| ||||||||||||||| |||| | || |||||||||||    
T  4290671 agttgggtgacattggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcattgtggcattgtgattg 4290583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 38975935 - 38975843
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattg 97  Q
    |||||||| | ||||||| | ||||||   ||||||||||| |||||| |||||| |||||||||||||||||||| | || |||||||||||    
T  38975935 atagagttaggtgacattggtgacattgatcaattataatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 38975843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 45231902 - 45231853
Alignment:
Q  87 cattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    ||||||||||||||||||||||||||||||||||||  |||||| |||||    
T  45231902 cattgtgattggtcaatgtcacccaactctatgtcacccaagtgttaccc 45231853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 4649393 - 4649333
Alignment:
Q  62 agagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    ||||||||||||||||||| | |  |||||||||||  |||||||||||||||||||||||    
T  4649393 agagagagaaacacaagcattgtagcattgtgattgaccaatgtcacccaactctatgtca 4649333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 27028838 - 27028905
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||||||| ||| || ||||||||||||||||| || | ||||||||||||||  ||||||||||    
T  27028838 aatgtcacaatgcttctgaaagagagagaaacacaaacattgtgacattgtgattgaccaatgtcacc 27028905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 22764757 - 22764812
Alignment:
Q  54 cttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||| ||||||||||||||||| || | ||||||||||||||| |||| |||||    
T  22764757 cttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatatcacc 22764812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 34854724 - 34854807
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||| |||||| | |||| |||||| |||||| |||||| |||||||||| || | || |||||||||||  ||||||||||    
T  34854724 gacattggccaatcacaatgccacaatgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatgtcacc 34854807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 10419551 - 10419485
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcac 108  Q
    |||||||||| ||||||| |||||||||||||||||| | | | ||||| ||||||  |||||||||    
T  10419551 aatgtcacaaaacttgtgaaagagagagaaacacaagtattgtaacattatgattgaccaatgtcac 10419485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 11016981 - 11017019
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  11016981 caatgtcacccaactctatgtcacccaagtgctacccgt 11017019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 34854757 - 34854695
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacc 135  Q
    |||||||| | || |||||||||||| |||||||||| ||||||||||||  |||||| ||||    
T  34854757 cacaagcattgtggcattgtgattggccaatgtcaccaaactctatgtcacccaagtgttacc 34854695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 45231908 - 45231962
Alignment:
Q  55 ttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||| |||||||||||||| ||||| | | ||||||||||||| ||||||||||    
T  45231908 ttgtgaaagagagagaaacaaaagcattgtaacattgtgattggccaatgtcacc 45231962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 48000867 - 48000769
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaat 103  Q
    |||||||||| ||||||| | ||||||  ||||| | |||| ||||||   |||| ||||||||||||||||| || | || |||||||||||| ||||    
T  48000867 atagagttgggtgacattggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaacacaaacattgtggcattgtgattggccaat 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 27028844 - 27028795
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    ||||||||||||||  |||||| ||||||||||||||||  |||||||||    
T  27028844 tgacattgtgattgtccaatgttacccaactctatgtcacccaagtgcta 27028795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 4649409 - 4649457
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgct 132  Q
    ||||||||||||||  |||||||||| |||||||||||| |||| ||||    
T  4649409 tgacattgtgattgaccaatgtcaccaaactctatgtcactcaattgct 4649457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 15027618 - 15027654
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  15027618 cacaagcattgtgacattgtgattggtcaatgtcacc 15027654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 30165332 - 30165368
Alignment:
Q  82 tatgacattgtgattggtcaatgtcacccaactctat 118  Q
    ||||||||||||||||  |||||||||||||||||||    
T  30165332 tatgacattgtgattgaccaatgtcacccaactctat 30165368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 42628407 - 42628443
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||||||||  ||||||||||||    
T  42628407 caatgtcacccaactctatgtcacccaagtgctaccc 42628443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 40789281 - 40789184
Alignment:
Q  33 gccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtg 130  Q
    |||||| | ||||||||||| |||||| ||||||||||||||||| || | ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  40789281 gccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcaccaaactctatgtcattcaagtg 40789184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 42375140 - 42375023
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||   |||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||  |||||    
T  42375140 atagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatg 42375041  T
Q  105 tcacccaactctatgtca 122  Q
    ||||||||||||||||||    
T  42375040 tcacccaactctatgtca 42375023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 53954740 - 53954631
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||  ||||||| ||||||||||| |||||| ||||| ||||||||| |||| | ||||||||||||||| |||||    
T  53954740 atagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaacactagcattgtgacattgtgattggccaatg 53954641  T
Q  105 tcacccaact 114  Q
    ||||||||||    
T  53954640 tcacccaact 53954631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 51265574 - 51265471
Alignment:
Q  6 tagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgt 105  Q
    ||||||||| ||||||| | ||||||  ||||| ||||||||||||| |||||| |||||||||||||||||||| | || |||||||||||| ||||||    
T  51265574 tagagttgggtgacattggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 51265475  T
Q  106 cacc 109  Q
    ||||    
T  51265474 cacc 51265471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 23444277 - 23444381
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||  ||||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||| |||||    
T  23444277 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 23444376  T
Q  105 tcacc 109  Q
    |||||    
T  23444377 tcacc 23444381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 47661972 - 47661868
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||  ||||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||| |||||    
T  47661972 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 47661873  T
Q  105 tcacc 109  Q
    |||||    
T  47661872 tcacc 47661868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 52028658 - 52028562
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||| |||||| | ||||||||||| |||||| ||||||||||||||||| || | |||||| |||||||| |||| ||||||||||||||||||    
T  52028658 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacatcgtgattggccaatatcacccaactctatgtca 52028562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 6271832 - 6271728
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||  ||| ||| | |||||| |||||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||| |||||    
T  6271832 atagagttgagtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 6271733  T
Q  105 tcacc 109  Q
    |||||    
T  6271732 tcacc 6271728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 47404630 - 47404710
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    ||||||||||| |||||| ||||||||||||| |||||| | || |||||||||||  |||||||||||||||||||||||    
T  47404630 aatgtcacaatgcttgtgaaagagagagaaacccaagcattgtggcattgtgattgaccaatgtcacccaactctatgtca 47404710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 55090041 - 55090121
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    ||||||||||| |||||| |||||||||| ||||||||| | ||||||||||||||  ||||||||| |||||||||||||    
T  55090041 aatgtcacaatgcttgtgaaagagagagagacacaagcattgtgacattgtgattgaccaatgtcactcaactctatgtca 55090121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 31430512 - 31430459
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccg 137  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  31430512 tgacattgtgattggtcaatgtcacccaactctatgtcacccaagtgctacccg 31430459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 35682296 - 35682192
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||| | ||||||| | ||||||  || || | ||||||||||| |||||| |||| ||||||||||||| | ||||||||||||||||| |||||    
T  35682296 atagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatg 35682197  T
Q  105 tcacc 109  Q
    |||||    
T  35682196 tcacc 35682192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 50384167 - 50384103
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccg 137  Q
    |||||||| | ||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  50384167 cacaagcattgtgacattgtgattggccaatgtcacccaactctatgtcacccaagtgctacccg 50384103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 47762734 - 47762635
Alignment:
Q  9 agttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcac 108  Q
    |||||||||| ||| | |||||| | |||  ||||||||||||| |||||| |||||||||||||| || || | | |||||||||||||||||||||||    
T  47762734 agttggatgatattggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaacataaacattgtaacattgtgattggtcaatgtcac 47762635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 24006099 - 24006198
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattc 125  Q
    |||||| |||||| | |||| |||||| |||||| |||||||||||||| ||        |||||||||||||||||||||||||||||||||||||  |    
T  24006099 gacattggccaatcacaatgacacaatgcttgtgaaagagagagaaacataa--------acattgtgattggtcaatgtcacccaactctatgtcaccc 24006190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 47404647 - 47404582
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    |||||||| | ||||||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  47404647 cacaagcattgtgacattgtgattgaccaatgtcacccaactctatgtcacccaagtgctacccgt 47404582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 30861823 - 30861886
Alignment:
Q  46 tcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||| |||||| |||||||||||||||||||| | || |||||||||||| ||||||||||    
T  30861823 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 30861886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 40789255 - 40789322
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccgttg 140  Q
    |||||||| | ||||||||||||||| |||| ||||| ||||||||||||  ||||||||||||||||    
T  40789255 cacaagcattgtgacattgtgattggccaatatcaccaaactctatgtcacccaagtgctacccgttg 40789322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 24006132 - 24006069
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||| | || |||||||||||| ||||||||||||||| |||||||  ||||||||||||    
T  24006132 cacaagcattgtgtcattgtgattggccaatgtcacccaactgtatgtcacccaagtgctaccc 24006069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 50384134 - 50384188
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagca 80  Q
    |||||| |||||| | ||||||||||| |||||| ||||||||||||||||||||    
T  50384134 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagca 50384188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 54716402 - 54716348
Alignment:
Q  82 tatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||| | ||||||    
T  54716402 tatgagattgtgattgatcaatgtcacccaactctatgtcactcaaatactaccc 54716348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 38714916 - 38714836
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||||||  ||||| |||| | ||||||| ||  | ||||||||||||||||| |||| ||||| ||||||||||||    
T  38714916 aatgtcacaatgtttgtgaaagaaatagaaacataaatattatgacattgtgattggccaatatcacctaactctatgtca 38714836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 52028625 - 52028673
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtc 121  Q
    |||||||| | ||||||||||||||| ||||||||||||| ||||||||    
T  52028625 cacaagcattgtgacattgtgattggccaatgtcacccaattctatgtc 52028673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 31532734 - 31532801
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||||||||  |||  |||||||||||| |||| || | |||| |||||||||||||||||||||    
T  31532734 aatgtcacaatatatgtaaaagagagagaaatacaaacattgtgacgttgtgattggtcaatgtcacc 31532801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 45591448 - 45591520
Alignment:
Q  35 caattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactc 115  Q
    |||| ||||||||||||| |||||| |||||||||||||||||        ||||||||||||  ||||||||||||||||    
T  45591448 caatcataatgtcacaatgcttgtgaaagagagagaaacacaa--------acattgtgattgaccaatgtcacccaactc 45591520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 26186061 - 26186124
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtca 107  Q
    ||||||||||| |||||| |||||  ||||||||||||| | ||| ||||||||||| ||||||||    
T  26186061 aatgtcacaatgcttgtgaaagag--agaaacacaagcattgtgaaattgtgattggccaatgtca 26186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 28693970 - 28693925
Alignment:
Q  88 attgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    |||||||||||||||||||| |||||| |||||||  |||||||||    
T  28693970 attgtgattggtcaatgtcatccaactttatgtcacccaagtgcta 28693925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 34176246 - 34176279
Alignment:
Q  105 tcacccaactctatgtcattcaagtgctacccgt 138  Q
    |||||||||||||||||| |||||||||||||||    
T  34176246 tcacccaactctatgtcactcaagtgctacccgt 34176279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 44379956 - 44379919
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctacccg 137  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  44379956 caatgtcactcaactctatgtcatccaagtgctacccg 44379919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 55090058 - 55090009
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||| | ||||||||||||||  ||||||||| |||||||||||||    
T  55090058 cacaagcattgtgacattgtgattgaccaatgtcactcaactctatgtca 55090009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 112
Target Start/End: Original strand, 17285817 - 17285845
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaa 112  Q
    |||||||||||||||||||||||||||||    
T  17285817 tgacattgtgattggtcaatgtcacccaa 17285845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 23444331 - 23444295
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  23444331 cacaagcattgtgacattgtgattggtcaatgtcacc 23444295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 42375122 - 42375158
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||||||||  ||||||||||||    
T  42375122 caatgtcacccaactctatgtcacccaagtgctaccc 42375158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 44379938 - 44379990
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttg 57  Q
    |||||||||  ||||||| | |||||| |||||||||||||||||||| ||||    
T  44379938 atagagttgagtgacattggcgacattggccaattataatgtcacaatgcttg 44379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 47661918 - 47661954
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  47661918 cacaagcattgtgacattgtgattggtcaatgtcacc 47661954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 7055 - 7159
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | || |||||||||| | ||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||| |||||    
T  7055 atagagttgggtgacattggtgatattagccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatg 7154  T
Q  105 tcacc 109  Q
    |||||    
T  7155 tcacc 7159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 24618609 - 24618737
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||   |||| | ||||||| ||| ||| || |||||||||||||||||||| | ||||||||||||||||||| |    
T  24618609 atagagttgggtgacattggtgacattgatcaatcacaatgtcataatgcttatgaaagagagagaaacacaagcattgtgacattgtgattggtcaacg 24618708  T
Q  105 tcacccaactctatgtcattcaagtgcta 133  Q
    ||||||||||||||||||  |||||||||    
T  24618709 tcacccaactctatgtcacccaagtgcta 24618737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 12343230 - 12343113
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||| ||| | |||||| |||||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||   ||||    
T  12343230 atagagttgggtgagattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgactaatg 12343131  T
Q  105 tcacccaactctatgtca 122  Q
    ||||||||||||||||||    
T  12343130 tcacccaactctatgtca 12343113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 10521878 - 10521974
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||| |||||| | ||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||    
T  10521878 gacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcattatgacattgtgattgaccaatgtcactcaactctatgtca 10521974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 31654385 - 31654304
Alignment:
Q  55 ttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    ||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||  ||||||||||||    
T  31654385 ttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcacccaactctatatcacccaagtgctaccc 31654304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 2315349 - 2315443
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||  ||||| ||||||| |||||| ||||| ||||  |||||||||  ||||||||||| ||||||||||||  ||||||||||||    
T  2315349 aatgtcacaatgtttgtgaaagagagcgaaacataagcattatggtattgtgattattcaatgtcacctaactctatgtcacacaagtgctaccc 2315443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 551210 - 551277
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||| ||||||  ||||| |||||||||||||||||||| | || |||||||||||| ||||||||||    
T  551210 aatgccacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 551277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 24587554 - 24587488
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcac 108  Q
    ||||||||||| |||||| || || |||||||||||||| | ||||||||||||||  |||||||||    
T  24587554 aatgtcacaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcac 24587488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 10521900 - 10521851
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    ||||||||||||||| |||||||||| ||||||||||||  |||||||||    
T  10521900 tgacattgtgattggccaatgtcaccaaactctatgtcacccaagtgcta 10521851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 17751032 - 17750928
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||| |||   |||||| ||| || | ||||||||||| |||||| |||||||| ||| |||| || | ||||||||||||||  |||||    
T  17751032 atagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtgaaagagagataaatacaaacattgtgacattgtgattgaccaatg 17750933  T
Q  105 tcacc 109  Q
    |||||    
T  17750932 tcacc 17750928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 24618627 - 24618591
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    ||||||||||||||||||||||| |||||||||||||    
T  24618627 caatgtcacccaactctatgtcactcaagtgctaccc 24618591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 13766781 - 13766751
Alignment:
Q  92 tgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||||||||||||||||||||||||||    
T  13766781 tgattggtcaatgtcacccaactctatgtca 13766751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 13043587 - 13043502
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacatt 90  Q
    |||||||||  ||| ||| | |||||| || ||| | ||| ||||||| |||||| |||||||||||||||||||| | |||||||    
T  13043587 atagagttgagtgatattggtgacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattgtgacatt 13043502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 46333975 - 46334071
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||| |||||| | ||||||||||| |||||| |||||||| ||||||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  46333975 gacattggccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcattgtgacattgtgattggtcaatgtcatccaactctatgtca 46334071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 17127568 - 17127675
Alignment:
Q  1 tgatatagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtc 100  Q
    |||||||||||| | ||||||||| ||||||  ||||| | ||||||||||| |||||| |||||||||||||||||||| | ||||||| |||||||||    
T  17127568 tgatatagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattttgattggtc 17127667  T
Q  101 aatgtcac 108  Q
    ||||||||    
T  17127668 aatgtcac 17127675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 32540756 - 32540860
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | | |||| |||||| | ||||||||||| |||||| |||||||||||||||||||| | | |||||||||||||||||||    
T  32540756 atagagttgggtgacattggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtaacattgtgattggtcaatg 32540855  T
Q  105 tcacc 109  Q
    |||||    
T  32540856 tcacc 32540860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 47303488 - 47303396
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctac 134  Q
    |||||||||||  ||||| ||||||||||||||||| || |||||||||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  47303488 aatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattggtcaatatcacctaactctatatcactcaagtgctac 47303396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 48993925 - 48994029
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | ||||||  ||||| | ||||||||||| |||||| |||||||||||||||||||| | || ||||||||||||||||||    
T  48993925 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 48994024  T
Q  105 tcacc 109  Q
    |||||    
T  48994025 tcacc 48994029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 37155155 - 37155072
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||| |||||| | |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||    
T  37155155 gacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcacc 37155072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 8337896 - 8337976
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||||||  ||||| ||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||    
T  8337896 aatgtcacaatgtttgtgaaagagagagaaacacaaacattgtggcattgtgattggtcaatgtcacccaactctatgtca 8337976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 15220941 - 15220813
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | || ||| |||||| | ||| ||||||| |||||| |||||||||||||||||||| | ||| || |||||||  |||||    
T  15220941 atagagttgggtgacattggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcattgtgagatcgtgattgaccaatg 15220842  T
Q  105 tcacccaactctatgtcattcaagtgcta 133  Q
    ||||||||||| ||||||  |||||||||    
T  15220841 tcacccaactccatgtcacccaagtgcta 15220813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 29371461 - 29371381
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    ||||||||||| |||||| ||||||||||||||||| || | ||||||||||||||| |||||||||| ||||||||||||    
T  29371461 aatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcacctaactctatgtca 29371381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 1819551 - 1819486
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  1819551 cacaagcattgtgacattgtgattgatcaatgtcacccaactctatgtcattcaagtgctatccgt 1819486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 5995499 - 5995399
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||||||||||| | ||||||  ||||| | |||| |||||| |||||| |||||||||||||||||||| | || |||||||||||| |||||    
T  5995499 atagagttggatgacattggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 5995400  T
Q  105 t 105  Q
    |    
T  5995399 t 5995399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 29179605 - 29179709
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | |||| |  ||||| | ||||||||||| |||||| |||||||||||||||||||| | || |||||||||||| |||||    
T  29179605 atagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 29179704  T
Q  105 tcacc 109  Q
    |||||    
T  29179705 tcacc 29179709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 33219703 - 33219579
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||||||||||| | ||||||   |||| | ||||||| ||| |||||| |||||||| ||||||||||| | | |||||||||||| ||||||    
T  33219703 atagagttggatgacattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcattgtaacattgtgattgatcaatg 33219604  T
Q  105 tcacccaactctatgtcattcaagt 129  Q
    ||| |||| |||| |||| ||||||    
T  33219603 tcatccaattctacgtcactcaagt 33219579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 34062302 - 34062222
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||||||  ||||| |||||||||||||| ||||| | || |||||||||||| |||||||||||||||||||||||    
T  34062302 aatgtcacaatgtttgtgaaagagagagaaacataagcattgtggcattgtgattggccaatgtcacccaactctatgtca 34062222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 49444921 - 49445036
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | |||||    |||| | ||||| ||||| ||||||  ||||||||||||||||||| | || |||||||||||| |||||    
T  49444921 atagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg--agagagagaaacacaagcattgtggcattgtgattggccaatg 49445018  T
Q  105 tcacccaactctatgtca 122  Q
    ||||||||||||||||||    
T  49445019 tcacccaactctatgtca 49445036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 1091589 - 1091656
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||||||| |||||| ||||||||||||||||| || | ||||||||||||||||||| ||||||    
T  1091589 aatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggtcaaagtcacc 1091656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 4609089 - 4609022
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||||||| |||||| ||||||||||||||||| || | |||||||||||| |||||||||||||    
T  4609089 aatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgatgggtcaatgtcacc 4609022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 741547 - 741617
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaa 112  Q
    ||||||||||| |||||| |||||||||||||||||||| | |||||||||||| |  |||||||||||||    
T  741547 aatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatcgaccaatgtcacccaa 741617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 38674541 - 38674628
Alignment:
Q  33 gccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||| | ||||||||||| |||||| |||||  ||||||||||||| | ||||||| ||||||| |||| ||||||||||||||||||    
T  38674541 gccaatcacaatgtcacaatgcttgtgaaagag--agaaacacaagcattgtgacattatgattggccaatatcacccaactctatgtca 38674628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 48823945 - 48823884
Alignment:
Q  75 caagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  48823945 caagcattgtgacattgtgattggccaatgtcacccaactctatgtcacccaagtgctaccc 48823884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 21630116 - 21630068
Alignment:
Q  61 aagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  21630116 aagagagagaaacacaagcattgtgacattgtgattggtcaatgtcacc 21630068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 46334008 - 46333944
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccg 137  Q
    |||||||| | ||||||||||||||| |||||||| ||||||||||||||  |||||||||||||    
T  46334008 cacaagcattgtgacattgtgattggccaatgtcatccaactctatgtcacccaagtgctacccg 46333944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 9157399 - 9157340
Alignment:
Q  46 tcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgt 105  Q
    ||||||| |||| | |||||||||||||||||||| | ||||||||||||||||||||||    
T  9157399 tcacaatgcttgagaaagagagagaaacacaagcattgtgacattgtgattggtcaatgt 9157340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 45728380 - 45728313
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||| ||| |||||| |||||||||||||||||||| | ||| |||||||||||||||| |||||    
T  45728380 aatgtcataatgcttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatatcacc 45728313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 28928841 - 28928779
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacc 135  Q
    |||||||| | ||||||||||||||| |||||||||| ||||||||||||  |||||||||||    
T  28928841 cacaagcactgtgacattgtgattggccaatgtcaccaaactctatgtcacccaagtgctacc 28928779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 28395708 - 28395663
Alignment:
Q  64 agagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  28395708 agagagaaacacaagcattgtgacattgtgattggtcaatgtcacc 28395663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 19711229 - 19711193
Alignment:
Q  86 acattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||||||||||||||||||||||||||||||||    
T  19711229 acattgtgattggtcaatgtcacccaactctatgtca 19711193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 34062296 - 34062332
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgt 120  Q
    |||||||||||||||||||||||||||||||||||||    
T  34062296 tgacattgtgattggtcaatgtcacccaactctatgt 34062332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 48604992 - 48605064
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaact 114  Q
    |||||||||||| ||||| ||||||||||||| |||||| | ||||||| | ||||| ||||||||| |||||    
T  48604992 aatgtcacaatatttgtgaaagagagagaaacgcaagcattgtgacattataattggccaatgtcactcaact 48605064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 29179623 - 29179584
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctacccgtt 139  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  29179623 caatgtcacccaactctatgtcatccaagtgctacccgtt 29179584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 36290456 - 36290519
Alignment:
Q  46 tcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||| |||||| |||||||||||||||||  | | ||||||||||||||||||||| ||||    
T  36290456 tcacaatgcttgtgaaagagagagaaacacaaatattgtgacattgtgattggtcaatgccacc 36290519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 44706829 - 44706896
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||| |||||| |||||| |||||||||||||||||||| |  | |||||||||||| ||||||||||    
T  44706829 aatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcacc 44706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 4609072 - 4609138
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccgtt 139  Q
    |||||||| | ||||||||||||||  |||||||||||||||||||||||  ||||| ||| |||||    
T  4609072 cacaagcattgtgacattgtgattgaccaatgtcacccaactctatgtcacacaagtactatccgtt 4609138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 48498504 - 48498553
Alignment:
Q  86 acattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  48498504 acattgtgattggtcaatgtca-ccaactctatgtcacccaagtgctaccc 48498553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 741564 - 741500
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccg 137  Q
    |||||||| | ||||||||||||||| |||||||||| || ||||| |||  |||||||||||||    
T  741564 cacaagcattgtgacattgtgattgggcaatgtcacctaattctatatcacgcaagtgctacccg 741500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 36290463 - 36290428
Alignment:
Q  87 cattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||||||| |||||||||||||||||||||||    
T  36290463 cattgtgattggccaatgtcacccaactctatgtca 36290428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 1819534 - 1819572
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagca 80  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  1819534 aatgtcacaatgcttgtgaaagagagagaaacacaagca 1819572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 9157388 - 9157446
Alignment:
Q  75 caagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    |||||| | ||| |||||||||| ||||||||| ||||||||||||||  |||||||||    
T  9157388 caagcattgtgatattgtgattgatcaatgtcaaccaactctatgtcacacaagtgcta 9157446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 37155133 - 37155167
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctat 118  Q
    ||||||||||||||| |||||||||||||||||||    
T  37155133 tgacattgtgattggccaatgtcacccaactctat 37155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 48604998 - 48604944
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    ||||||||||||||  |||||||||| |||||||| |||| ||| ||||||||||    
T  48604998 tgacattgtgattgaccaatgtcacctaactctatatcatccaaatgctacccgt 48604944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 38674567 - 38674518
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||| | ||||||||||||||| |||| ||||||||||| ||||||    
T  38674567 cacaagcattgtgacattgtgattggccaatatcacccaactccatgtca 38674518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 33219649 - 33219685
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| |||||||||||||||| |||||||||||    
T  33219649 cacaagcattatgacattgtgattgatcaatgtcacc 33219685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 48993943 - 48993907
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||||||||  ||||||||||||    
T  48993943 caatgtcacccaactctatgtcacccaagtgctaccc 48993907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 48993979 - 48993943
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  48993979 cacaagcattgtgacattgtgattggtcaatgtcacc 48993943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 49444939 - 49444903
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||||||||  ||||||||||||    
T  49444939 caatgtcacccaactctatgtcacccaagtgctaccc 49444903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 47677300 - 47677391
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    ||||||||||| |||||| ||||||||||||||||| || | |||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  47677300 aatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgatcaatgtcacccaactctatgtcacacaagtgcta 47677391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 1801454 - 1801566
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||| | |||||| |||||| | |||| |||||| |||||| ||||||||||||||||| || | || |||||||||||| |||||    
T  1801454 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatg 1801553  T
Q  105 tcacccaactcta 117  Q
    |||||||||||||    
T  1801554 tcacccaactcta 1801566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 51046081 - 51046185
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||||||| ||| | ||||||   |||| |||||||||||||  ||||| |||||||||||||||||||| |||| |||||||||||| |||||    
T  51046081 atagagttggatgatattggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattatggcattgtgattggccaatg 51046180  T
Q  105 tcacc 109  Q
    |||||    
T  51046181 tcacc 51046185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 30476503 - 30476595
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctat 118  Q
    |||||| |||||| | ||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||  |||||||||  ||||||||    
T  30476503 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcacataactctat 30476595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 47492061 - 47492153
Alignment:
Q  11 ttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaat 103  Q
    |||| ||||||| | |||||| |||||| | ||||||||||| |||||| || ||||||||||||||||| | ||||||||||||||| ||||    
T  47492061 ttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaat 47492153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 29031759 - 29031850
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    ||||||||||| |||||| ||||||||||||||||| || | ||||||||| ||||  |||| ||||| ||||||||||||  |||||||||    
T  29031759 aatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtaattgaccaatatcacctaactctatgtcacacaagtgcta 29031850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 30580764 - 30580867
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    ||||| |||| ||||||| | || |||  ||||| |||||||||||||| ||||| |||||| ||||||||||||| | ||||||||||||||  |||||    
T  30580764 atagaattgggtgacattggtgatattgaccaatcataatgtcacaatatttgtgaaagagatagaaacacaagcactgtgacattgtgattgaccaatg 30580863  T
Q  105 tcac 108  Q
    ||||    
T  30580864 tcac 30580867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 30734447 - 30734514
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||||||| |||||| |||| ||||||||||||| | ||||||||||||||||| ||||||||||    
T  30734447 aatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcacc 30734514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 33689285 - 33689214
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattg 97  Q
    |||||| |||||| | ||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||    
T  33689285 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattg 33689214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 39385746 - 39385818
Alignment:
Q  55 ttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaa 127  Q
    ||||| |||||||||||| ||||  | | | ||||||||||||| ||||||||||||||||||||||||||||    
T  39385746 ttgtgaaagagagagaaatacaaatattgtaacattgtgattggccaatgtcacccaactctatgtcattcaa 39385818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 41753094 - 41752990
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||  ||||||| | |||||| |||||| | |||| |||||| |||||| |||||| |||||||||| || | || |||||||||||| |||||    
T  41753094 atagagttgagtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagaaagaaacacaaacattgtggcattgtgattggccaatg 41752995  T
Q  105 tcacc 109  Q
    |||||    
T  41752994 tcacc 41752990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 33689252 - 33689315
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||| | ||||||||||||||| |||||||||||||||| ||||||  ||||||||||||    
T  33689252 cacaagcattgtgacattgtgattggccaatgtcacccaactcaatgtcacccaagtgctaccc 33689315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 43139771 - 43139708
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||| | ||||||||||||||  | ||||||||||||||||||||| |||||||||||||    
T  43139771 cacaagcattctgacattgtgattgaccgatgtcacccaactctatgtcactcaagtgctaccc 43139708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 50524832 - 50524730
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||  ||||||| | || ||||| |||| | ||||| || || |||||| ||||||||||||||||| || | ||||||| |||||||||||||    
T  50524832 atagagttgagtgacattggtgatattagtcaatcacaatgttacgatgcttgtgaaagagagagaaacacaaacattgtgacattatgattggtcaatg 50524733  T
Q  105 tca 107  Q
    |||    
T  50524732 tca 50524730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 50550075 - 50550001
Alignment:
Q  35 caattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    |||| ||||||||| |||  ||||| |||||||||||||||||||| | | | ||||||||||||||||||||||    
T  50550075 caatcataatgtcataatgtttgtgaaagagagagaaacacaagcattgtaatattgtgattggtcaatgtcacc 50550001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 49414510 - 49414562
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    ||||||||| ||||| |||||||||||||||||||||||  ||||||||||||    
T  49414510 tgacattgtaattggccaatgtcacccaactctatgtcacccaagtgctaccc 49414562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 43139754 - 43139821
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacc 109  Q
    ||||||| ||| |||||| |||||||||||||||||||| | || |||||| ||||| ||||||||||    
T  43139754 aatgtcagaatgcttgtgaaagagagagaaacacaagcattgtggcattgttattggccaatgtcacc 43139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 1801566 - 1801620
Alignment:
Q  68 agaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||||| || | || |||||||||||| |||||||||||||||||||||||    
T  1801566 agaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtca 1801620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 49418736 - 49418806
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaa 112  Q
    ||||||| |||| ||||| |||||||||||||||||||| ||||| ||| | ||||  |||||||||||||    
T  49418736 aatgtcataatatttgtgaaagagagagaaacacaagcattatgatattataattgaccaatgtcacccaa 49418806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 47677317 - 47677268
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||| | |||||||||||| ||||||||||||| ||||||||||||    
T  47677317 cacaagcattgtgacattgtgatcggtcaatgtcaccaaactctatgtca 47677268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 49418744 - 49418691
Alignment:
Q  82 tatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacc 135  Q
    ||||||||||||||||  |||| ||||||||||||||||||  |||||||||||    
T  49418744 tatgacattgtgattgaccaatatcacccaactctatgtcacccaagtgctacc 49418691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 18321738 - 18321784
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtcattcaagtg 130  Q
    ||||||||||||||  |||||||| ||||||||||||||| ||||||    
T  18321738 tgacattgtgattgaccaatgtcatccaactctatgtcatccaagtg 18321784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 29031776 - 29031710
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgctacccgtt 139  Q
    |||||||| | ||||||||||||||  |||| ||||| ||||||||||||| |||||| || |||||    
T  29031776 cacaagcattgtgacattgtgattgaccaatatcacctaactctatgtcatgcaagtgttatccgtt 29031710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 1272561 - 1272597
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||||||||  ||||||||||||    
T  1272561 caatgtcacccaactctatgtcacccaagtgctaccc 1272597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 30476536 - 30476476
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    |||||||| | ||||||||||||||| |||||||||| | |||| |||||  |||||||||    
T  30476536 cacaagcattgtgacattgtgattggccaatgtcacctagctctctgtcacacaagtgcta 30476476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 45103135 - 45103099
Alignment:
Q  100 caatgtcacccaactctatgtcattcaagtgctaccc 136  Q
    |||||||||||||||||||||||  ||||||||||||    
T  45103135 caatgtcacccaactctatgtcacccaagtgctaccc 45103099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 63866 - 63770
Alignment:
Q  26 gacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||| |||||| | ||||||||||| |||||| ||||||||||||||||| || | || |||||||||||| |||||||||||||||||||||||    
T  63866 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtca 63770  T

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Target: scaffold0047; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 63833 - 63878
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctat 118  Q
    |||||||| | ||||||||||||||| |||||||||||||||||||    
T  63833 cacaagcattgtgacattgtgattggccaatgtcacccaactctat 63878  T

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Target: scaffold0016 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 49711 - 49828
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| |||||||   ||||||  ||||| | ||||||||||| |||||| |||| ||||||||||||||| | || |||||||||||| |||||    
T  49711 atagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcattgtggcattgtgattggccaatg 49810  T
Q  105 tcacccaactctatgtca 122  Q
    ||||| ||||||||||||    
T  49811 tcacctaactctatgtca 49828  T

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Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 49730 - 49691
Alignment:
Q  99 tcaatgtcacccaactctatgtcattcaagtgctacccgt 138  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  49730 tcaatgtcacccaactctatgtcacccaagtgctacccgt 49691  T

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Target: scaffold0161 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 27228 - 27332
Alignment:
Q  5 atagagttggatgacattagagacattagccaattataatgtcacaatacttgtgtaagagagagaaacacaagcaatatgacattgtgattggtcaatg 104  Q
    |||||||||| ||||||||| || ||| |||||| | ||||||| ||| |||||| |||||||||||||| ||||| | || |||||||||||| ||||     
T  27228 atagagttgggtgacattagtgatattggccaatcacaatgtcataattcttgtgaaagagagagaaacagaagcattgtggcattgtgattggccaata 27327  T
Q  105 tcacc 109  Q
    |||||    
T  27328 tcacc 27332  T

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Target: scaffold0481 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 2938 - 2900
Alignment:
Q  84 tgacattgtgattggtcaatgtcacccaactctatgtca 122  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2938 tgacattgtgattggtcaatatcacccaactctatgtca 2900  T

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Target: scaffold1033 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 2289 - 2349
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    |||||||| | |||||||||||||| |||||||| ||||| |||||||||  |||||||||    
T  2289 cacaagcattgtgacattgtgattgatcaatgtcgcccaattctatgtcacacaagtgcta 2349  T

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Target: scaffold1033; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 2306 - 2268
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagca 80  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  2306 aatgtcacaatgcttgtgaaagagagagaaacacaagca 2268  T

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Target: scaffold1029 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 2289 - 2349
Alignment:
Q  73 cacaagcaatatgacattgtgattggtcaatgtcacccaactctatgtcattcaagtgcta 133  Q
    |||||||| | |||||||||||||| |||||||| ||||| |||||||||  |||||||||    
T  2289 cacaagcattgtgacattgtgattgatcaatgtcgcccaattctatgtcacacaagtgcta 2349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1029; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 2306 - 2268
Alignment:
Q  42 aatgtcacaatacttgtgtaagagagagaaacacaagca 80  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  2306 aatgtcacaatgcttgtgaaagagagagaaacacaagca 2268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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