View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14684_low_65 (Length: 231)
Name: NF14684_low_65
Description: NF14684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14684_low_65 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 7211034 - 7211247
Alignment:
| Q |
1 |
cactacaaggaagaaatcttttttagaaaaagtcaaatatttattttgtatatttaatgtatatgcagtttgaaacattacatagttagtaactgtgatc |
100 |
Q |
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|||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7211034 |
cactacaaggaaaaaaaaatatttagaaaaagtcaaatatttattttgtatatttaatgtatatgcagtttgaaacattacatagttagtaactgtgatc |
7211133 |
T |
|
| Q |
101 |
actctatatctactactttcttaaatgctcagtgaagcacttatgataaggaacttgaagaaatgaagcacatgactcggcaagaatttgtcgccaattt |
200 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7211134 |
actctatatctactactttcttaaatgctcagttaagcacttatgataaggaacttgaagaaatgaagcacatgactcggcaagaatttgtcgccaattt |
7211233 |
T |
|
| Q |
201 |
aagaaggtaccatt |
214 |
Q |
| |
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|||||||||||||| |
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| T |
7211234 |
aagaaggtaccatt |
7211247 |
T |
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