View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14688_high_7 (Length: 273)
Name: NF14688_high_7
Description: NF14688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14688_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 4377814 - 4377580
Alignment:
| Q |
17 |
aattttctgctaggaatcaaagtttagaatcaacgaagtttatagcataaagtgttatatattatagtacatcttacaatcacctacctagctcacaaaa |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4377814 |
aattttctgctaggaatcaaagtttagaatcaacgaagtttatagcataaagtgttatatattatagtacatcttacaatcacctacctagctcacaaaa |
4377715 |
T |
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| Q |
117 |
taacaaatcaataacataagtaactaccgcaactaagattcgatgagactaaatctcaaatcttaattacaaagcccaataggcctaaccgatatatcac |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
4377714 |
taacaaatcaataacataagtaactaccgcaactaagattcgatgagactaaatctcaaatcttaattacaaagcccaacaggcctaaccgatatatcac |
4377615 |
T |
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| Q |
217 |
catttaattacataatgttattttcttatgtgatt |
251 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
4377614 |
catttaattacataatgttattttcttatgtgatt |
4377580 |
T |
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