View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14689_low_12 (Length: 336)
Name: NF14689_low_12
Description: NF14689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14689_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 318
Target Start/End: Original strand, 8786543 - 8786846
Alignment:
| Q |
16 |
atgaatatataatatgaattgtcaaaagattgaatatatagtatgatagacgtaaaatagatgtttcctttgaatcatcaatctctattcgtcttgagca |
115 |
Q |
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| T |
8786543 |
atgaatatataatatgaattgtcaaaagattgaatatatagtatgatagacgtaaaatagatgttttctctgaatcatcaatctctattcgtcttgagta |
8786642 |
T |
|
| Q |
116 |
gaaatctacatttt-aaataaaatttgcagttnnnnnnnnnnnnngacataaatagatgttcgcccaacttaattaatcaaaatcagagcctcatatcct |
214 |
Q |
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| T |
8786643 |
gaaatctacttttttaaataaaatttgctgttaaaaagaaaaaaagacataaatagatgttcgcccaacttaattaatcaaaatcagagcctcatatcct |
8786742 |
T |
|
| Q |
215 |
ctcttatacgagttcgaactttgcaaaacatttttgttttgcattaggcatttattaagaaaatgaaaatgaactacatgttaatgtcttttatttttgt |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
8786743 |
ctcttatacgagttcgaactttgcaaaacatttttgttttgcattaggcatttattaagaaaatgaaaatcaactacatgttaatgtcttttatttttgt |
8786842 |
T |
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| Q |
315 |
tact |
318 |
Q |
| |
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|||| |
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| T |
8786843 |
tact |
8786846 |
T |
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