View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14689_low_17 (Length: 292)
Name: NF14689_low_17
Description: NF14689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14689_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 38342691 - 38342409
Alignment:
| Q |
1 |
cagtcacattgctgcacactgataaacttctgcactcagcacctcacactacacttataccaaattcaattacaccactagaagccaaaaaacttctgcg |
100 |
Q |
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| T |
38342691 |
cagtcacattgctgcacactgataaacttctgcacccagcacctcacactacacttataccaaattcaattgcaccactccaagccaaaaaacttctgcg |
38342592 |
T |
|
| Q |
101 |
gtgtgtagcagaacagaaccaa----gtatgctcacttctttctcaatcaaagaattgtatccacatagatgcatcttatgaataatcacaatgacacaa |
196 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38342591 |
gtgtgtagcagaacagaaccaaccaagtatgctcacttctttctcaatcaaagaattgtatccacatagatgcatcttatgaataatcacaatgacacaa |
38342492 |
T |
|
| Q |
197 |
cttgttgtattaaatatattcaagccatcacagacaattgaattcattacatacctggacctatttaccacaaccatattctt |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |
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| T |
38342491 |
cttgttgtattaaatatattcaagccatcacagacaattgaattcattacatacccagacctatttaccacaaccattttctt |
38342409 |
T |
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