View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14689_low_6 (Length: 436)
Name: NF14689_low_6
Description: NF14689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14689_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 1 - 419
Target Start/End: Complemental strand, 31510605 - 31510187
Alignment:
| Q |
1 |
acaacaagaaaatgagatacaagttgaaacaaaaattccaactccaccaacaaaacaagtcaagtttcatgctagtgttgtttcttcggggagaaaaggg |
100 |
Q |
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| T |
31510605 |
acaacaagaaaatgagatacaagttgaaacaaaaattccaactccaccaacaaaacaagtcaaatttcatgctagtgttgtttcttctgggagaaaaggg |
31510506 |
T |
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| Q |
101 |
tcttctctaatagctcaatctgttccagatttctcttcaatgttacgaaaagagaatcgtaaaccgacgaatataccacaacctagtactactactttga |
200 |
Q |
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| T |
31510505 |
tcttctctaatagctcaatctgttccagatttctcttcaatgttacgaaaagagaatcgtaaaccgacgaatataccacaacctagtactactactttga |
31510406 |
T |
|
| Q |
201 |
cacctcctttgaagaacaagaacaaaggttgtgttggtggtggtggtgttttgtcaagttctagagggaatagtagatcagcaaatgctgctgcagagaa |
300 |
Q |
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| T |
31510405 |
cacctcctttgaagaacaagaacaaaggttgtgttggtggtggtggtgttttgtcaagttctagagggaatagtagatcagcaaatgctgctgcagagaa |
31510306 |
T |
|
| Q |
301 |
gagaaagggtggtggaattcttatggcaaggaaaagttatgctaattttgatgagcttagaagtttttcttcagctaccgcaaatgctatcaatggtgag |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
31510305 |
gagaaagggtggtggaattcttatggcaaggaaaagttatgctaattttgatgagcttagaagtttttcttcagctactgcaaatgctatcaatggtgag |
31510206 |
T |
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| Q |
401 |
ggtaggaatagtagagttg |
419 |
Q |
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||||||||||||||||||| |
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| T |
31510205 |
ggtaggaatagtagagttg |
31510187 |
T |
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