View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1468_low_13 (Length: 305)
Name: NF1468_low_13
Description: NF1468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1468_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 8 - 289
Target Start/End: Original strand, 43765124 - 43765405
Alignment:
| Q |
8 |
aagcaaaggcaacaacttagcaagcaattaggacttgctcctaggcaagtcaaattttggttccaaaatcgtcgtacccaaatcaaggtattatttaaat |
107 |
Q |
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| T |
43765124 |
aagcaaaggcaacaacttagcaagcaattaggacttgctcctaggcaagtcaaattttggttccaaaatcgtcgtacccaaatcaaggtattatttaaat |
43765223 |
T |
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| Q |
108 |
caactaaataaaaattgtgctattttttgcattttaattattaggtgaacttaacaataatattaagcactacttgtgttgcattttttcaggcaataca |
207 |
Q |
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| T |
43765224 |
caactaaataaaaattgtgctattttttgcattttaattattaggtgaatttaacaataatattaagcactacttgtgttgcattttttcaggcaataca |
43765323 |
T |
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| Q |
208 |
agagcgacatgaaaattccttgttgaaatcagaaatagagaaactaagggagaaaaataagaccctacgagagaccataaat |
289 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43765324 |
agagcgacatgaaaattcattgttgaaatcagaaatagagaaactaagggagaaaaataagaccctacgagagaccataaat |
43765405 |
T |
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