View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1468_low_22 (Length: 263)

Name: NF1468_low_22
Description: NF1468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1468_low_22
NF1468_low_22
[»] chr5 (51 HSPs)
chr5 (8-234)||(4650028-4650253)
chr5 (5-192)||(8739148-8739335)
chr5 (21-234)||(28445381-28445594)
chr5 (5-169)||(16429070-16429233)
chr5 (20-173)||(38640720-38640872)
chr5 (15-192)||(27494123-27494297)
chr5 (7-81)||(8738947-8739021)
chr5 (8-129)||(34530252-34530373)
chr5 (17-129)||(38640971-38641083)
chr5 (5-166)||(8973569-8973731)
chr5 (5-170)||(34530031-34530194)
chr5 (5-89)||(28445169-28445253)
chr5 (5-129)||(16429319-16429443)
chr5 (5-74)||(6156823-6156892)
chr5 (9-74)||(38372401-38372466)
chr5 (5-74)||(20891705-20891774)
chr5 (5-74)||(29862704-29862773)
chr5 (5-74)||(33487702-33487771)
chr5 (8-81)||(37183744-37183817)
chr5 (5-74)||(38871763-38871832)
chr5 (17-129)||(43388038-43388149)
chr5 (8-67)||(31221302-31221361)
chr5 (5-67)||(32841930-32841993)
chr5 (5-67)||(31929085-31929146)
chr5 (5-74)||(4064680-4064749)
chr5 (3-64)||(14111969-14112030)
chr5 (5-66)||(27493909-27493970)
chr5 (5-74)||(39524868-39524937)
chr5 (1-74)||(40613631-40613704)
chr5 (7-74)||(21070458-21070525)
chr5 (9-72)||(23269431-23269494)
chr5 (8-74)||(38692746-38692812)
chr5 (5-74)||(15799317-15799386)
chr5 (5-74)||(26093538-26093607)
chr5 (9-74)||(26095184-26095249)
chr5 (5-74)||(27158176-27158245)
chr5 (5-81)||(7884278-7884354)
chr5 (11-74)||(12847535-12847598)
chr5 (7-74)||(40619952-40620019)
chr5 (12-74)||(15957841-15957903)
chr5 (5-67)||(28083338-28083400)
chr5 (5-74)||(24203644-24203713)
chr5 (143-191)||(6801023-6801071)
chr5 (69-173)||(36359604-36359709)
chr5 (5-67)||(13908647-13908709)
chr5 (5-67)||(27212808-27212865)
chr5 (5-74)||(6800887-6800956)
chr5 (23-74)||(25747117-25747168)
chr5 (131-234)||(25968243-25968345)
chr5 (57-102)||(26319180-26319225)
chr5 (6-83)||(41253383-41253460)
[»] chr8 (43 HSPs)
chr8 (5-234)||(33472043-33472270)
chr8 (17-192)||(24627584-24627761)
chr8 (5-192)||(31234689-31234875)
chr8 (7-129)||(31234480-31234602)
chr8 (17-170)||(41530709-41530862)
chr8 (5-84)||(10833475-10833554)
chr8 (5-78)||(33472404-33472477)
chr8 (5-102)||(24627884-24627981)
chr8 (3-74)||(9845316-9845387)
chr8 (5-74)||(8885413-8885482)
chr8 (1-74)||(9073634-9073707)
chr8 (5-74)||(28916905-28916974)
chr8 (9-74)||(37248688-37248753)
chr8 (46-129)||(7970993-7971076)
chr8 (5-74)||(3094815-3094884)
chr8 (5-74)||(14164017-14164086)
chr8 (5-74)||(27927901-27927970)
chr8 (5-74)||(34853458-34853527)
chr8 (2-74)||(40392666-40392738)
chr8 (5-67)||(42280851-42280913)
chr8 (9-74)||(16310729-16310794)
chr8 (5-74)||(17119839-17119908)
chr8 (13-74)||(40994922-40994983)
chr8 (5-74)||(44106353-44106422)
chr8 (5-74)||(4259595-4259664)
chr8 (5-74)||(11698276-11698345)
chr8 (5-74)||(36980699-36980768)
chr8 (10-74)||(7982508-7982572)
chr8 (8-67)||(40328034-40328093)
chr8 (10-68)||(7965935-7965993)
chr8 (5-83)||(7981635-7981713)
chr8 (5-67)||(36165798-36165860)
chr8 (5-74)||(28423551-28423620)
chr8 (1-65)||(1374079-1374143)
chr8 (124-192)||(17119955-17120022)
chr8 (24-78)||(9845519-9845573)
chr8 (9-78)||(6395210-6395279)
chr8 (12-61)||(36317939-36317988)
chr8 (124-192)||(4259711-4259778)
chr8 (5-61)||(10840717-10840773)
chr8 (5-67)||(21004521-21004583)
chr8 (57-95)||(36404177-36404215)
chr8 (5-61)||(34645520-34645576)
[»] chr3 (53 HSPs)
chr3 (20-192)||(32025000-32025172)
chr3 (17-192)||(8735200-8735373)
chr3 (17-192)||(9087441-9087614)
chr3 (5-129)||(8735468-8735592)
chr3 (5-129)||(9087709-9087833)
chr3 (17-173)||(45244425-45244577)
chr3 (5-74)||(35142204-35142273)
chr3 (21-129)||(45244674-45244782)
chr3 (5-67)||(38977708-38977770)
chr3 (9-74)||(3352030-3352095)
chr3 (5-74)||(33438651-33438720)
chr3 (5-74)||(47123156-47123225)
chr3 (5-74)||(51540574-51540643)
chr3 (5-79)||(33842034-33842108)
chr3 (8-74)||(50716382-50716448)
chr3 (8-74)||(50796399-50796465)
chr3 (5-74)||(501101-501170)
chr3 (5-74)||(47130522-47130591)
chr3 (1-81)||(29035922-29036002)
chr3 (5-69)||(35345869-35345933)
chr3 (8-74)||(47769392-47769458)
chr3 (5-74)||(3902766-3902835)
chr3 (9-74)||(28873135-28873200)
chr3 (5-74)||(34821303-34821372)
chr3 (5-74)||(47739892-47739961)
chr3 (1-74)||(51492929-51493002)
chr3 (5-64)||(46624860-46624919)
chr3 (5-67)||(49096186-49096249)
chr3 (5-67)||(51258540-51258603)
chr3 (5-67)||(43472929-43472991)
chr3 (5-74)||(27143376-27143445)
chr3 (9-74)||(47979970-47980035)
chr3 (5-74)||(52777361-52777430)
chr3 (1-81)||(29048466-29048545)
chr3 (69-192)||(48304008-48304131)
chr3 (125-192)||(35345939-35346005)
chr3 (5-67)||(2358582-2358644)
chr3 (36-74)||(29035844-29035882)
chr3 (5-67)||(39149946-39150008)
chr3 (9-55)||(46622759-46622805)
chr3 (124-173)||(30721880-30721929)
chr3 (7-67)||(5127861-5127921)
chr3 (10-81)||(26053485-26053557)
chr3 (25-81)||(43420110-43420166)
chr3 (14-74)||(45712053-45712113)
chr3 (11-74)||(512214-512277)
chr3 (204-234)||(4508861-4508891)
chr3 (204-234)||(32024949-32024979)
chr3 (63-141)||(44085434-44085514)
chr3 (132-169)||(46555380-46555417)
chr3 (5-41)||(4300240-4300276)
chr3 (5-45)||(30721770-30721810)
chr3 (119-171)||(47980077-47980128)
[»] chr2 (35 HSPs)
chr2 (1-234)||(34519488-34519719)
chr2 (5-178)||(17766784-17766956)
chr2 (5-135)||(9847167-9847297)
chr2 (5-173)||(9847375-9847543)
chr2 (5-74)||(39447292-39447361)
chr2 (5-173)||(25715401-25715555)
chr2 (5-74)||(44465682-44465751)
chr2 (5-64)||(32187824-32187883)
chr2 (8-74)||(15995071-15995137)
chr2 (5-67)||(41203141-41203203)
chr2 (5-67)||(45153746-45153808)
chr2 (9-74)||(33452402-33452467)
chr2 (5-74)||(36875115-36875184)
chr2 (5-72)||(41510384-41510450)
chr2 (9-67)||(17474758-17474816)
chr2 (9-74)||(5507549-5507614)
chr2 (5-74)||(42894507-42894576)
chr2 (5-61)||(19109970-19110026)
chr2 (5-81)||(33440465-33440540)
chr2 (5-64)||(16750384-16750442)
chr2 (20-78)||(25715686-25715744)
chr2 (10-80)||(38066633-38066703)
chr2 (5-74)||(8388781-8388850)
chr2 (5-74)||(25217730-25217799)
chr2 (5-74)||(34517231-34517300)
chr2 (1-78)||(34817227-34817304)
chr2 (8-55)||(30763798-30763845)
chr2 (57-102)||(33367029-33367074)
chr2 (124-192)||(19110085-19110152)
chr2 (5-49)||(41854859-41854903)
chr2 (1-41)||(42478906-42478946)
chr2 (141-192)||(38308880-38308931)
chr2 (140-175)||(45293681-45293716)
chr2 (5-63)||(37773771-37773829)
chr2 (141-170)||(37773895-37773924)
[»] chr1 (36 HSPs)
chr1 (5-129)||(43318940-43319064)
chr1 (5-122)||(800552-800669)
chr1 (5-173)||(43319151-43319319)
chr1 (5-123)||(9445846-9445964)
chr1 (28-234)||(800781-800985)
chr1 (5-122)||(9446055-9446172)
chr1 (5-74)||(17000508-17000577)
chr1 (5-74)||(41584625-41584694)
chr1 (5-67)||(52744803-52744865)
chr1 (5-74)||(45046810-45046879)
chr1 (5-67)||(32817571-32817633)
chr1 (5-74)||(7011340-7011409)
chr1 (1-74)||(49677613-49677686)
chr1 (5-64)||(34006400-34006460)
chr1 (5-65)||(40650635-40650695)
chr1 (7-74)||(45567852-45567919)
chr1 (5-67)||(8364145-8364206)
chr1 (5-67)||(44573057-44573119)
chr1 (13-74)||(34162690-34162751)
chr1 (8-170)||(3561298-3561457)
chr1 (5-69)||(25563374-25563438)
chr1 (5-67)||(15069801-15069863)
chr1 (9-67)||(24472791-24472849)
chr1 (8-74)||(40907897-40907963)
chr1 (5-74)||(42546097-42546166)
chr1 (8-67)||(27794968-27795027)
chr1 (5-67)||(28866590-28866652)
chr1 (57-103)||(30829479-30829525)
chr1 (5-46)||(38885371-38885412)
chr1 (5-61)||(49786411-49786467)
chr1 (204-234)||(9446207-9446237)
chr1 (5-67)||(18583504-18583566)
chr1 (5-67)||(23442875-23442937)
chr1 (9-78)||(8704482-8704551)
chr1 (57-102)||(24471327-24471372)
chr1 (12-67)||(26723455-26723510)
[»] chr7 (34 HSPs)
chr7 (6-192)||(8214462-8214646)
chr7 (5-170)||(5731145-5731309)
chr7 (8-81)||(8214253-8214326)
chr7 (10-129)||(5730941-5731060)
chr7 (5-74)||(9151926-9151995)
chr7 (5-74)||(28230428-28230497)
chr7 (5-74)||(36468497-36468566)
chr7 (5-74)||(42925601-42925670)
chr7 (5-74)||(5278394-5278463)
chr7 (5-74)||(42865062-42865131)
chr7 (5-67)||(3936245-3936307)
chr7 (5-74)||(24042148-24042217)
chr7 (5-74)||(37518255-37518324)
chr7 (5-192)||(16278135-16278305)
chr7 (5-67)||(19818517-19818579)
chr7 (5-74)||(36946252-36946320)
chr7 (9-74)||(48776175-48776240)
chr7 (5-65)||(24690294-24690354)
chr7 (1-53)||(43737233-43737285)
chr7 (11-74)||(36408501-36408564)
chr7 (5-67)||(1518844-1518906)
chr7 (5-74)||(19225558-19225627)
chr7 (5-81)||(6467100-6467176)
chr7 (125-192)||(7115347-7115413)
chr7 (5-67)||(36629342-36629402)
chr7 (124-170)||(47239680-47239726)
chr7 (9-67)||(48775745-48775803)
chr7 (8-81)||(31985480-31985553)
chr7 (5-63)||(16983702-16983760)
chr7 (5-67)||(47202631-47202693)
chr7 (5-34)||(33151373-33151402)
chr7 (124-192)||(6467714-6467781)
chr7 (124-192)||(30861120-30861187)
chr7 (3-67)||(43185919-43185983)
[»] chr4 (43 HSPs)
chr4 (3-129)||(25140464-25140590)
chr4 (40-192)||(7817354-7817505)
chr4 (5-129)||(25140675-25140799)
chr4 (40-192)||(7794198-7794351)
chr4 (8-74)||(19835658-19835724)
chr4 (5-74)||(40703802-40703871)
chr4 (5-81)||(41323052-41323128)
chr4 (8-102)||(42660338-42660432)
chr4 (5-74)||(25491355-25491424)
chr4 (1-74)||(25752400-25752473)
chr4 (5-74)||(31582382-31582451)
chr4 (5-74)||(48319024-48319093)
chr4 (5-74)||(53893985-53894054)
chr4 (6-74)||(7931795-7931863)
chr4 (5-81)||(14474172-14474247)
chr4 (17-84)||(25140894-25140961)
chr4 (5-67)||(2505991-2506053)
chr4 (5-74)||(17933097-17933166)
chr4 (5-74)||(25538939-25539008)
chr4 (9-74)||(38536308-38536373)
chr4 (5-74)||(55052579-55052648)
chr4 (5-67)||(8106538-8106601)
chr4 (5-67)||(27181481-27181542)
chr4 (5-74)||(3703209-3703278)
chr4 (12-67)||(41413065-41413120)
chr4 (5-67)||(47873955-47874017)
chr4 (5-74)||(7863579-7863648)
chr4 (9-74)||(27879686-27879751)
chr4 (5-74)||(46440234-46440303)
chr4 (5-67)||(27742073-27742136)
chr4 (93-187)||(27742967-27743063)
chr4 (5-67)||(34973009-34973071)
chr4 (9-63)||(47784138-47784191)
chr4 (9-67)||(52089330-52089388)
chr4 (125-170)||(48095945-48095989)
chr4 (5-55)||(6228773-6228823)
chr4 (5-67)||(32441955-32442017)
chr4 (1-63)||(47456749-47456811)
chr4 (17-74)||(32600978-32601035)
chr4 (13-74)||(49002822-49002883)
chr4 (5-34)||(54631452-54631481)
chr4 (5-49)||(6003633-6003677)
chr4 (69-129)||(50392453-50392513)
[»] chr6 (27 HSPs)
chr6 (5-102)||(17500968-17501065)
chr6 (5-74)||(2539581-2539650)
chr6 (5-129)||(17501151-17501280)
chr6 (1-74)||(14587516-14587589)
chr6 (5-74)||(23406926-23406995)
chr6 (5-80)||(5699689-5699764)
chr6 (5-74)||(1945490-1945559)
chr6 (5-64)||(21514991-21515050)
chr6 (5-74)||(4508262-4508331)
chr6 (1-74)||(13800983-13801056)
chr6 (8-74)||(236924-236990)
chr6 (5-74)||(3717243-3717312)
chr6 (5-74)||(17264540-17264609)
chr6 (5-74)||(2813185-2813254)
chr6 (5-74)||(7734286-7734355)
chr6 (5-74)||(29519409-29519478)
chr6 (9-74)||(34528570-34528635)
chr6 (125-179)||(29289703-29289756)
chr6 (5-74)||(24604321-24604390)
chr6 (5-49)||(32044537-32044581)
chr6 (5-67)||(9905251-9905314)
chr6 (1-31)||(1439164-1439194)
chr6 (8-41)||(6704089-6704122)
chr6 (5-74)||(29289585-29289654)
chr6 (9-53)||(10310395-10310439)
chr6 (141-193)||(13801118-13801170)
chr6 (124-192)||(29519305-29519372)
[»] scaffold0016 (1 HSPs)
scaffold0016 (5-102)||(205766-205863)
[»] scaffold0182 (1 HSPs)
scaffold0182 (5-67)||(23239-23301)
[»] scaffold0027 (1 HSPs)
scaffold0027 (5-74)||(141923-141992)
[»] scaffold0010 (1 HSPs)
scaffold0010 (5-67)||(140622-140684)
[»] scaffold0006 (2 HSPs)
scaffold0006 (13-67)||(59497-59551)
scaffold0006 (13-83)||(59938-60008)
[»] scaffold0508 (1 HSPs)
scaffold0508 (5-74)||(3355-3424)
[»] scaffold0137 (1 HSPs)
scaffold0137 (24-66)||(9476-9518)


Alignment Details
Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 8 - 234
Target Start/End: Complemental strand, 4650253 - 4650028
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaa 107  Q
    ||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||||| |||| ||||    
T  4650253 gatgaaagataggaagattaatattgttcttacaatgactatccatgtgacaaacatgttcaaaattggtgttgatgttatccggattacttaatccaaa 4650154  T
Q  108 gtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctatttttggannnnnnnnggat 207  Q
     ||||||||||||||| |||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||||||        ||||    
T  4650153 ctgcatcagcaccatgaaaaaatggtgtttaggggggtgttcatattttataattcgaaaaaatcaaatagcacatcctatttttgga-tttttttggat 4650055  T
Q  208 tacaaaatccgaattggtgaaaaactc 234  Q
    |||||||||||||||||||||||||||    
T  4650054 tacaaaatccgaattggtgaaaaactc 4650028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 192
Target Start/End: Original strand, 8739148 - 8739335
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||| |||||  ||  |||||||||||| |    
T  8739148 aaggatgagagttaggaagattaatattgtccttaaaatgactacccatgttacaaacatgttcagaattggtgctggtgcagtttggattacgtaatcc 8739247  T
Q  105 aaagtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccg-aaaaaatcaaatagcacaccctattttt 192  Q
     || ||||||||||||||| ||||| |||||||| ||||||||||  ||||||||| ||| ||||||||||||||||||||||||||||    
T  8739248 gaattgcatcagcaccatgaaaaaagggtgttta-gggggtgttcgtattctataaaccgaaaaaaatcaaatagcacaccctattttt 8739335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 234
Target Start/End: Original strand, 28445381 - 28445594
Alignment:
Q  21 aagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcacc 120  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||||||||| | || |||||| | |||    
T  28445381 aagattaatattgtccttaaaatgactatccatgttacaaacatgttcagaattcgtgctggtgatgtccggattacgtaatccgaactgcatcggtacc 28445480  T
Q  121 atggaaaaatggtgtttaggg-gggtgttcagattctataatccgaaaaaatcaaatagcacaccctatttttggannnnnnnnggattacaaaatccga 219  Q
    ||| ||||||||||||||||| |||||||| |||| ||||||| |||||| |||  |||| | |||||||||| ||        ||||||||||||||||    
T  28445481 atgaaaaaatggtgtttagggagggtgttcggattttataatctgaaaaattcatttagcgcgccctattttttga-gattttcggattacaaaatccga 28445579  T
Q  220 attggtgaaaaactc 234  Q
    |||||||||||||||    
T  28445580 attggtgaaaaactc 28445594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 16429233 - 16429070
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||||||||| |||||||| |||| |  ||||||||||||||||||| ||||||||||| |||||||||||||||| |||  |||||||||||| |    
T  16429233 aaggatgagagttatgaagattagtattatcattaaaatgactatccatgttacaaacatgtttagaattggtgttggtgctgtttggattacgtaatcc 16429134  T
Q  105 aaagtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaa 169  Q
     || ||||||||||||||| ||||| || ||||| |||||||||  |||||||| ||||||||||    
T  16429133 gaactgcatcagcaccatgaaaaaaaggcgttta-gggggtgtttggattctattatccgaaaaa 16429070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 38640872 - 38640720
Alignment:
Q  20 gaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcac 119  Q
    ||||||||||||||| |||||| ||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||| |  | |||||||||||    
T  38640872 gaagattaatattgtccttaaattgactatccatgttataaacatgttcagaattggtgttggtgctgtccggattacgtaatccggattgcatcagcac 38640773  T
Q  120 catg-gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatca 173  Q
    ||||  ||||| ||||||||  ||||||||| |||| | ||||||||| ||||||    
T  38640772 catgaaaaaaagggtgttta--ggggtgttcggattatgtaatccgaataaatca 38640720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 27494123 - 27494297
Alignment:
Q  15 gttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatc 114  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||| |||||  ||  |||| ||||||| | || ||||||    
T  27494123 gttaggaagattaatattgtccttaaaatgactatccatgttacaaatatgtttagaattggtgctggtgcagtttggatcacgtaatccgaactgcatc 27494222  T
Q  115 agcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    |||| |||| ||||| ||||||||   |||||||| ||||||||||||  |||| |||||||||| |  |||||||||    
T  27494223 agcatcatgaaaaaaaggtgttta---gggtgttcggattctataatctaaaaatatcaaatagcgcgtcctattttt 27494297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 8738947 - 8739021
Alignment:
Q  7 ggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8738947 ggatgagagttaggaagattaatattgttcttaaaatgactatccatgttacaaacatgttcagaattggtgttg 8739021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 34530373 - 34530252
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaa 107  Q
    ||||| ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||| ||||||||| | ||||| ||||||| ||    
T  34530373 gatgaaagttaggaagattaatattgtccttaaaatgactaaccatgttacaaacatgttcagaattagtgctggtgttgttcagattatgtaattcgaa 34530274  T
Q  108 gtgcatcagcaccatggaaaaa 129  Q
     ||||| ||||||||| |||||    
T  34530273 ttgcattagcaccatgaaaaaa 34530252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 38641083 - 38640971
Alignment:
Q  17 taggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcag 116  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| |||| ||||| || | ||||| ||    
T  38641083 taggaagattaatattgtccttaaaatgactatctatgttacaaacatgttcagaattggtgttggtgctgtccgaattatgtaatccagattgcattag 38640984  T
Q  117 caccatggaaaaa 129  Q
    | ||||| |||||    
T  38640983 ccccatgaaaaaa 38640971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 8973569 - 8973731
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||||||||||| ||||||||  |||   ||   |||||||||||      
T  8973569 aaggatgagagttaggaaggttaatattgtccttaaaatgattatccatgttacaaacatgttcaaaattggtgcgggtacagttaagattacgtaatct 8973668  T
Q  105 aaagtgcatcagcaccatg-gaaaaatggtgtttaggggggtgttcagattctataatccgaa 166  Q
    ||  ||||||| |||||||  ||||| |||||||| ||||||||||  |||||||||||||||    
T  8973669 aacctgcatcaacaccatgaaaaaaagggtgtttatgggggtgttcgaattctataatccgaa 8973731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 34530194 - 34530031
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||||| |  |||||||||| || |||||||| || || |||| |||||||||||| |    
T  34530194 aaggatgaaagttaggaagattaatactgtccttaaaatgactatcca-gctacaaacatgtccaaaattggtgctgatgatgtctggattacgtaatcc 34530096  T
Q  105 aaagtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaa 170  Q
     || ||||||||||||||  ||||| | |||||| | | |||||| |||||||||||| |||||||    
T  34530095 gaactgcatcagcaccataaaaaaaggctgttta-gagcgtgttcggattctataatctgaaaaaa 34530031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 28445169 - 28445253
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtc 89  Q
    |||||||||||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||||||||||||||| |||||||    
T  28445169 aaggatgagagttaggaagattaatattgtccttaaaacgaccatacatgttacaaacatgttcagaattggtgttgatgttgtc 28445253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 16429443 - 16429319
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||| |||||| |||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| || ||| ||  |||||| ||||| |    
T  16429443 aaggataagagtttggaagattaatattgtccttaaaacgactattcatgttacaaacatgttcagaattggtgctgatgtagtttggattaggtaatcc 16429344  T
Q  105 aaagtgcatcagcaccatggaaaaa 129  Q
     || ||||| ||||||||| |||||    
T  16429343 gaactgcattagcaccatgaaaaaa 16429319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 6156892 - 6156823
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  6156892 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 6156823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 38372466 - 38372401
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  38372466 atgagagttaggaagattaatattgtccctaaaatgactatccatgtaacaaacatgtttagaatt 38372401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 20891774 - 20891705
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||||| ||||||    
T  20891774 aaggatgagagttaggaagattaatattatccctaaaatgactatccatgttacaaacatgtttagaatt 20891705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 29862773 - 29862704
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  29862773 aaggatgaaagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 29862704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 33487771 - 33487702
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| || ||||||    
T  33487771 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatttttagaatt 33487702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 37183744 - 37183817
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| || |||||| ||||||    
T  37183744 gatgagagttaggaagattaatattgtccataaaatgactatccatgttacaaacatatttagaatttgtgttg 37183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 38871832 - 38871763
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||||||| ||||||    
T  38871832 aaggatgagagttaggaagattattattgtccctaaaatgactatccatgttacaaacatgtttagaatt 38871763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 43388038 - 43388149
Alignment:
Q  17 taggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcag 116  Q
    |||||||||||||||||| |||||||  ||||||||||| | ||| |||||||||||||||||||||  |||| | |||||||||| |  | ||||||||    
T  43388038 taggaagattaatattgtccttaaaaa-actatccatgttataaatatgttcagaattggtgttggtactgtctgaattacgtaatccggattgcatcag 43388136  T
Q  117 caccatggaaaaa 129  Q
    ||||||| |||||    
T  43388137 caccatgaaaaaa 43388149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 31221302 - 31221361
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  31221302 gatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtt 31221361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 32841930 - 32841993
Alignment:
Q  5 aaggatgagagttaggaagattaatattgtt-cttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  32841930 aaggatgagagttaggaagattaatattgttccctaaaatgactatccatgttacaaacatgtt 32841993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 31929085 - 31929146
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  31929085 aaggatgagagttaggaagattaatattg-tcctaaaatgactatccatgttacaaacatgtt 31929146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 4064680 - 4064749
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||||||||||||||| ||||| | |||||||||||||||||| ||||||||||| ||||||    
T  4064680 aaggatgatagttaggaagattaacattgtccctaaaatgactatccatgttacaaacatgtttagaatt 4064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 14112030 - 14111969
Alignment:
Q  3 ataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacat 64  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  14112030 ataaggatgaaagttaggaagattaatattgtccctaaaatgactatccatgttacaaacat 14111969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 27493909 - 27493970
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgt 66  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  27493909 aaggatgaatgttaggaagattaatattgtttttaaaatgactatccatgttacaaacatgt 27493970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 39524937 - 39524868
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| | ||||| ||||| ||||||    
T  39524937 aaggatgagagttaggaagattaatattgttcctaaaatgactatacatattacaaatatgtttagaatt 39524868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40613631 - 40613704
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||| ||||||||||||||||| ||| |||||||| | ||||||||| ||||||||||||| ||||    
T  40613631 acataaggatgaaagttaggaagattaataatgtccttaaaataattatccatgttacaaacatgttcataatt 40613704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 21070525 - 21070458
Alignment:
Q  7 ggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||    
T  21070525 ggatgagggttatgaagattaatattgtccttaaaatgactatctatgttacaaatatgttcagaatt 21070458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 23269494 - 23269431
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaa 72  Q
    |||||||||||||||||||||||||| |||||||||| | | ||||| ||||||||||||||||    
T  23269494 atgagagttaggaagattaatattgtccttaaaatgattgttcatgttacaaacatgttcagaa 23269431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 38692746 - 38692812
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||| ||| ||||||||||| |||||||||| ||||||||| ||||||||||| ||||||    
T  38692746 gatgagagttatgaatattaatattgtccttaaaatgattatccatgttacaaacatgtttagaatt 38692812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 15799386 - 15799317
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||| || ||||||||| ||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  15799386 aaggatgcgaattaggaagaataatattgtccataaaatgactatccatgttacaaacatgtttagaatt 15799317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 26093607 - 26093538
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| |||||||||| |||| | |||||||||||||||||| | ||||||||||| ||||    
T  26093607 aaggatgagagttaagaagattaattttgtccataaaatgactatccatgttagaaacatgttcataatt 26093538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 26095249 - 26095184
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||| ||||||||||||||| | ||| |||||||||||||| ||||||||||| ||||||    
T  26095249 atgagagttaagaagattaatattgtccataatatgactatccatgttacaaacatgtttagaatt 26095184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 27158245 - 27158176
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||  |||||||| |||||||||| ||||||||||||||||||||  |||||||||||| ||||    
T  27158245 aaggatgaggattaggaagcttaatattgtccttaaaatgactatccatgtttcaaacatgttcataatt 27158176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 7884354 - 7884278
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    |||||||||||||||||||||||||||||| | ||||||||| || ||| | |||||||| || |||||| ||||||    
T  7884354 aaggatgagagttaggaagattaatattgtccctaaaatgacaatacatattacaaacatatttagaatttgtgttg 7884278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 12847598 - 12847535
Alignment:
Q  11 gagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||| |||||||||||||||| | |||||||| |||| |||| ||||||||||||||||||    
T  12847598 gagagttgggaagattaatattgtccataaaatgattatctatgttacaaacatgttcagaatt 12847535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 40619952 - 40620019
Alignment:
Q  7 ggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||| | |||||||| | ||||||| |||| |||||| ||||||    
T  40619952 ggatgagagttaggaagattaatattgtccctaaaatgattgtccatgttacaagcatgtttagaatt 40620019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 15957903 - 15957841
Alignment:
Q  12 agagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||| | |||||| |||||| |||| ||||||||||| ||||||    
T  15957903 agagttaggaagattaatattgtccctaaaattactatctatgttacaaacatgtttagaatt 15957841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 28083338 - 28083400
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||| |||||| |||||||||||||| | |||||||||||||||||| ||||| |||||    
T  28083338 aaggatgaaagttagaaagattaatattgtccctaaaatgactatccatgttacaaatatgtt 28083400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 24203644 - 24203713
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||| ||||||||||||| ||||||||||| |||||||||| |||||  || ||||||||||| ||||||    
T  24203644 aaggttgagagttaggaacattaatattgtccttaaaatgattatcccagttacaaacatgtttagaatt 24203713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 6801023 - 6801071
Alignment:
Q  143 ggtgttcagattctataatccgaaaaaatcaaatagcacaccctatttt 191  Q
    |||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  6801023 ggtgtttagattttataatccgaaaaaatcaaatagcacgccctatttt 6801071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 36359604 - 36359709
Alignment:
Q  69 agaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcaccatg--gaaaaatggtgtttaggggggtgttcagattctataatccgaa 166  Q
    |||||||||| |||||||||| ||||||||||||    | ||||||| |||||||   ||||| |||||||| |||||| |||||||| | |||||||||    
T  36359604 agaattggtgatggtgttgtctggattacgtaatctggattgcatcaacaccatgaaaaaaaaaggtgttta-gggggttttcagattatgtaatccgaa 36359702  T
Q  167 aaaatca 173  Q
    |||||||    
T  36359703 aaaatca 36359709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 13908709 - 13908647
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||  |||| ||||||||||||||| | |||||||||||||| ||| |||||||||||    
T  13908709 aaggatgaaggttaagaagattaatattgtccataaaatgactatccgtgttacaaacatgtt 13908647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 27212865 - 27212808
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||||||||||||||||||     ||||||||| |||| |||||||||||    
T  27212865 aaggatgagagttaggaagattaatattgttc-----atgactatctatgttacaaacatgtt 27212808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 6800887 - 6800956
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||| | ||||||||||  ||||| |||||||||||| |||||||  |||||||||||| ||||    
T  6800887 aaggatgagaatgaggaagattagcattgtccttaaaatgactgtccatgttgcaaacatgttcataatt 6800956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 25747168 - 25747117
Alignment:
Q  23 gattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||| |||| | |||||||||||||||||| ||||||||||| ||||||    
T  25747168 gattaatgttgtccctaaaatgactatccatgttacaaacatgtttagaatt 25747117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 25968345 - 25968243
Alignment:
Q  131 ggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctatttttggannnnnnnnggattacaaaatccgaattggtgaaaa 230  Q
    ||||||||||||| ||||| |||| ||||||||||||||| |||  | |||| ||||||||| |         |||||| ||||||||||||||||||||    
T  25968345 ggtgtttagggggctgttcggattttataatccgaaaaaagcaaggaacacatcctattttttg-gggtattcggattataaaatccgaattggtgaaaa 25968247  T
Q  231 actc 234  Q
    ||||    
T  25968246 actc 25968243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 26319225 - 26319180
Alignment:
Q  57 acaaacatgttcagaattggtgttggtgttgtccggattacgtaat 102  Q
    ||||||||||||||| |||||| ||||| ||| |||||||||||||    
T  26319225 acaaacatgttcagatttggtgctggtgctgtacggattacgtaat 26319180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 41253460 - 41253383
Alignment:
Q  6 aggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggt 83  Q
    ||||||| |||||||||||||||||| || |||||| |   ||| ||||| ||||||| ||||| |||||||| ||||    
T  41253460 aggatgatagttaggaagattaatatggtacttaaattcgttattcatgttacaaacaagttcataattggtgctggt 41253383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 33472270 - 33472043
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| | |||  ||  |||||| |||||||    
T  33472270 aaggatgagagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgttaagaattggtgcttgtgcagtttggattatgtaattc 33472171  T
Q  105 aaagtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctatttttggannnnnnnng 204  Q
     || ||||||||||||||  |||||||||||||| ||||||| | |||||||||||||||||||||||||||||| | |||||||||| ||        |    
T  33472170 gaactgcatcagcaccataaaaaaatggtgttta-gggggtggttagattctataatccgaaaaaatcaaatagcgcgccctattttttga-ggttttcg 33472073  T
Q  205 gattacaaaatccgaattggtgaaaaactc 234  Q
    ||||| | ||||||||||||||||||||||    
T  33472072 gattatagaatccgaattggtgaaaaactc 33472043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 24627761 - 24627584
Alignment:
Q  17 taggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcag 116  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| |  | ||||||||    
T  24627761 taggaagattaatattgtccttaaaatgactatccatgttacaaacatattcagaattggtgctggtgttgtccggattacgtaatccggattgcatcag 24627662  T
Q  117 caccatg---gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    |||||||    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |  |||||||||    
T  24627661 caccatgaaaaaaaaatggtgttta-gggggtattcggattctataatccgaaaaaatcaaatagcgcgtcctattttt 24627584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 192
Target Start/End: Original strand, 31234689 - 31234875
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| || || ||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||| | ||| ||||||||||||||||| |    
T  31234689 aaggatgaaagctaagaagattaatattgtccttaaaatgacgatccatgttacgaacatgttcagaattggtgctagtgctgtccggattacgtaatcc 31234788  T
Q  105 aaagtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
     || |||||||| |||||| |||||||||||||| |||| ||||| ||||||||||||||||||||| | ||||| | ||||||||||    
T  31234789 gaactgcatcagtaccatgaaaaaatggtgttta-ggggttgttcggattctataatccgaaaaaattatatagcgcgccctattttt 31234875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 31234480 - 31234602
Alignment:
Q  7 ggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaa 106  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||||||||| | |    
T  31234480 ggatgggagttaggaagattaatattgtccttaaaatgactatccatgttacaaatatgttcagaattggtgctggtgttgttcggattacgtaatccga 31234579  T
Q  107 agtgcatcagcaccatggaaaaa 129  Q
    | ||||| | ||||||| |||||    
T  31234580 actgcattaacaccatgtaaaaa 31234602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 41530862 - 41530709
Alignment:
Q  17 taggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcag 116  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||| |  | |||| |||    
T  41530862 taggaagattaatattgtccttgaaatgactatccatgttacaaacatgttcaaaattggtgatggtgatgtccggattacgtaatccggattgcaacag 41530763  T
Q  117 caccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaa 170  Q
    ||||||| ||||| ||  |||  ||||||||||||||| | ||||| |||||||    
T  41530762 caccatgaaaaaaagggtttttagggggtgttcagattatgtaatctgaaaaaa 41530709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 10833475 - 10833554
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtg 84  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  10833475 aaggatgaaagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgttcagaattggtgctggtg 10833554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 33472477 - 33472404
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtg 78  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  33472477 aaggatgatagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgttcagaattggtg 33472404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 24627981 - 24627884
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaat 102  Q
    |||||||| || ||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||| |||| |||| ||||| ||||    
T  24627981 aaggatgaaagctaggaagattaatattgtcattaaaatgactatcaatgttacaaacatgttcagaattggtgttgatgttatccgaattacttaat 24627884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 9845387 - 9845316
Alignment:
Q  3 ataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  9845387 ataaggacgagagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgttcataatt 9845316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 8885413 - 8885482
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  8885413 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 8885482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9073707 - 9073634
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  9073707 acataaggatgagacttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 9073634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 28916974 - 28916905
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  28916974 aaggatgagagttagaaagattaatattgtccctaaaatgactatccatgtaacaaacatgtttagaatt 28916905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 37248753 - 37248688
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  37248753 atgagagttaggaagattaatattgtccctaaaatgactatccatgtaacaaacatgtttagaatt 37248688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 7970993 - 7971076
Alignment:
Q  46 ctatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcaccatggaaaaa 129  Q
    |||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||| |  | |||||||||||||||||||||    
T  7970993 ctatccatgttacaaacatgttcagaattgatgctggtgctgtccggattacgtaatccggattgcatcagcaccatggaaaaa 7971076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 3094884 - 3094815
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||| ||||||    
T  3094884 aaggatgagagttaggaagattaatattgtccataaaatgattatccatgttacaaacatgtttagaatt 3094815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 14164017 - 14164086
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  14164017 aaggatgagagttaggaaaattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 14164086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 27927901 - 27927970
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||| ||||||    
T  27927901 aaggatgagagttaggaagattaatattgtctctaaaatgactatccatgttacaaacatgtttagaatt 27927970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 34853527 - 34853458
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| || ||||||    
T  34853527 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatttttagaatt 34853458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 40392738 - 40392666
Alignment:
Q  2 cataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||| ||| ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  40392738 cataaagataagagttaggaagattaatattgtccataaaatgactatccatgttacaaacatgtttagaatt 40392666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 42280851 - 42280913
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||||||    
T  42280851 aaggatgagagttaggaagattaatattgtccctaaaatgactatgcatgttacaaacatgtt 42280913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 16310794 - 16310729
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| ||||||    
T  16310794 atgagagttaggaagattaatattgtccctaaaatgactattcatgttacaaacatgtttagaatt 16310729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 17119839 - 17119908
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||| || ||||||    
T  17119839 aaggatgagagttaggaagattaatattgtccgtaaaatgacaatccatgttacaaacatatttagaatt 17119908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 40994983 - 40994922
Alignment:
Q  13 gagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  40994983 gagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 40994922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 44106422 - 44106353
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |  ||||||||||||||| ||||||||||| ||||||    
T  44106422 aaggatgagagttaggaagattaatattgtccatggaatgactatccatgttacaaacatgtttagaatt 44106353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 4259595 - 4259664
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||| |||| ||||||||| | ||||||    
T  4259595 aaggatgatagttaggaagattaatattgtccataaaatgactatcaatgttacaaacatgcttagaatt 4259664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 11698276 - 11698345
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||| | | |||||||||||||||||| | ||||||| | ||||||    
T  11698276 aaggatgagagttaggaagattaatattatccctaaaatgactatccatgttaaaaacatgcttagaatt 11698345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 36980768 - 36980699
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||| |||||||| ||||| |||||||| |||||||||| ||||||||| ||||||||||||| ||||    
T  36980768 aaggataagagttagaaagatcaatattgtccttaaaatgattatccatgttacaaacatgttcataatt 36980699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 7982572 - 7982508
Alignment:
Q  10 tgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| |||||||||||||||| ||||||||||||||  |||| ||||||||||||| ||||    
T  7982572 tgagagttgggaagattaatattgtccttaaaatgactatttatgttacaaacatgttcaaaatt 7982508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 40328093 - 40328034
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| |||||||||||    
T  40328093 gatgagagttaggaagattaatattatccataaaatgacaatccatgttacaaacatgtt 40328034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 7965935 - 7965993
Alignment:
Q  10 tgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttc 68  Q
    ||||||||||||||| || |||||| |||||| ||||||||||||| ||||||||||||    
T  7965935 tgagagttaggaagactagtattgtccttaaagtgactatccatgttacaaacatgttc 7965993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 7981713 - 7981635
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggt 83  Q
    ||||||||| ||||||||  |||| ||||| |||||||| | ||||||||| ||||||||||||| |||| ||||||||    
T  7981713 aaggatgagggttaggaaacttaacattgtccttaaaataaatatccatgttacaaacatgttcaaaatttgtgttggt 7981635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 36165798 - 36165860
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||| |||||||||||||||   |||||| ||||||||||| |||||||||||    
T  36165798 aaggatgagagttaagaagattaatattgtctctaaaataactatccatgttacaaacatgtt 36165860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 28423620 - 28423551
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||||||||||   |||||||   |||||||| ||||||||||| ||||||    
T  28423620 aaggatgagagttaggaagattaatattgtctgtaaaatgttcatccatgttacaaacatgtttagaatt 28423551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1374143 - 1374079
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatg 65  Q
    ||||||||||||||||||| | ||||||||| ||||||||  ||||||||||| | |||||||||    
T  1374143 acataaggatgagagttagaatgattaatatagttcttaatctgactatccatattacaaacatg 1374079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 17119955 - 17120022
Alignment:
Q  124 gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    ||||||||||||||| |||| |||||||||| ||||| |||||||||||||||||| | ||| ||||||    
T  17119955 gaaaaatggtgtttaagggg-tgttcagattatataaaccgaaaaaatcaaatagcgcgcccaattttt 17120022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 9845573 - 9845519
Alignment:
Q  24 attaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtg 78  Q
    ||||||||||  |||||||||| ||||||||| ||||||||||| ||||||||||    
T  9845573 attaatattgcccttaaaatgagtatccatgttacaaacatgtttagaattggtg 9845519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 6395279 - 6395210
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtg 78  Q
    ||||||||||||||| |||||||||| | |||||||| ||||||||  ||||| | |||| |||||||||    
T  6395279 atgagagttaggaagtttaatattgtccataaaatgaatatccatgctacaaaaaagttcggaattggtg 6395210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 36317988 - 36317939
Alignment:
Q  12 agagttaggaagattaatattgttcttaaaatgactatccatgtaacaaa 61  Q
    |||||||| |||||||||||||| |||||||||| ||||||||| |||||    
T  36317988 agagttagaaagattaatattgtccttaaaatgattatccatgttacaaa 36317939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 4259711 - 4259778
Alignment:
Q  124 gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    |||||||||||||||||||| || ||| ||| |||||||||||||||||||  | ||| ||||||||||    
T  4259711 gaaaaatggtgtttaggggg-tgctcaaattatataatccgaaaaaatcaaggaacacgccctattttt 4259778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 10840717 - 10840773
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaa 61  Q
    |||||||||||||||||||||||||||||| |||| | ||  ||||||||| |||||    
T  10840717 aaggatgagagttaggaagattaatattgtccttacactggttatccatgttacaaa 10840773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 21004583 - 21004521
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||| ||||||| ||||||||||||||| | ||||||| |||| ||||| ||||| |||||    
T  21004583 aaggataagagttatgaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 21004521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 36404177 - 36404215
Alignment:
Q  57 acaaacatgttcagaattggtgttggtgttgtccggatt 95  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  36404177 acaaacatgttcagaattggtgctggtgctgtccggatt 36404215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 34645576 - 34645520
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaa 61  Q
    ||||||||||||||| || ||||| ||| | ||||||||||||||| |||| |||||    
T  34645576 aaggatgagagttagaaaaattaaaattatccttaaaatgactatctatgttacaaa 34645520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 32025172 - 32025000
Alignment:
Q  20 gaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcac 119  Q
    ||||||||||||||| ||||||| ||||||  || | |||||||||||||||||||||| |||||||||||| |||||||||| | || |||||||| ||    
T  32025172 gaagattaatattgtccttaaaacgactatttatattacaaacatgttcagaattggtgctggtgttgtccgaattacgtaatccgaactgcatcaggac 32025073  T
Q  120 catg-gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    ||||  |||||||||||||| |||||||||||||||||||||||||||||||||| ||||  | ||||||||||    
T  32025072 catgaaaaaaatggtgttta-gggggtgttcagattctataatccgaaaaaatcatatagtgcgccctattttt 32025000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 8735373 - 8735200
Alignment:
Q  17 taggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcag 116  Q
    |||||| ||||||||||| |||||||||||||||||||| | |||||||||||||||||||| ||||| |||||| ||| ||||||    | |||||||     
T  8735373 taggaatattaatattgtccttaaaatgactatccatgttataaacatgttcagaattggtgctggtgctgtccgaatttcgtaatctggattgcatcaa 8735274  T
Q  117 caccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    ||||||| ||||| ||||||||  ||||| ||  ||||||||||||||||||||||||||||| ||||||||||||    
T  8735273 caccatgaaaaaagggtgttta--ggggtttttggattctataatccgaaaaaatcaaatagcgcaccctattttt 8735200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 9087614 - 9087441
Alignment:
Q  17 taggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcag 116  Q
    |||||| ||||||||||| |||||||||||||||||||| | |||||||||||||||||||| ||||| |||||| ||| ||||||    | |||||||     
T  9087614 taggaatattaatattgtccttaaaatgactatccatgttataaacatgttcagaattggtgctggtgctgtccgaatttcgtaatctggattgcatcaa 9087515  T
Q  117 caccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    ||||||| ||||| ||||||||  ||||| ||  ||||||||||||||||||||||||||||| ||||||||||||    
T  9087514 caccatgaaaaaagggtgttta--ggggtttttggattctataatccgaaaaaatcaaatagcgcaccctattttt 9087441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 8735592 - 8735468
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||||||| |    
T  8735592 aaggatgaaagttaggaagattaatattgtccttaaaatgactatcaatgttacaaacatgttcataattggtgttgatgttgtccggattacgtaatcc 8735493  T
Q  105 aaagtgcatcagcaccatggaaaaa 129  Q
    | | ||||| ||||||||| |||||    
T  8735492 agactgcattagcaccatgaaaaaa 8735468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 9087833 - 9087709
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||||||| |    
T  9087833 aaggatgaaagttaggaagattaatattgtccttaaaatgactatcaatgttacaaacatgttcataattggtgttgatgttgtccggattacgtaatcc 9087734  T
Q  105 aaagtgcatcagcaccatggaaaaa 129  Q
    | | ||||| ||||||||| |||||    
T  9087733 agactgcattagcaccatgaaaaaa 9087709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 45244577 - 45244425
Alignment:
Q  17 taggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcag 116  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||| | ||| ||||||||||||||||| || | ||||||||    
T  45244577 taggaagattaatattgtccttaaaatgactaaccatgttacaaacatgttcagaattggtgctcgtgctgtccggattacgtaatccagattgcatcag 45244478  T
Q  117 caccatg-gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatca 173  Q
    |||||||  ||||| |||||||     ||| |||||||| | ||||||||||||||||    
T  45244477 caccatgaaaaaaagggtgttt-----ggttttcagattatgtaatccgaaaaaatca 45244425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 35142273 - 35142204
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||    
T  35142273 aaggatgagagttaggaagattaatattgtctttaaaatgactatccatgttacaaacatgtttagaatt 35142204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 45244782 - 45244674
Alignment:
Q  21 aagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcacc 120  Q
    ||||||||||| || |||| |||||||||| |||| | |||||||||||||||||||| |||| |||||||||||||||||| |  | ||||| ||||||    
T  45244782 aagattaatatcgtccttataatgactatcaatgttataaacatgttcagaattggtgatggtattgtccggattacgtaatccggattgcattagcacc 45244683  T
Q  121 atggaaaaa 129  Q
    ||| |||||    
T  45244682 atgaaaaaa 45244674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 38977708 - 38977770
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  38977708 aaggatgagagttaggaagattaatattgtccataaaatgactatccatgttacaaacatgtt 38977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3352030 - 3352095
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  3352030 atgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 3352095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 33438720 - 33438651
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||| | ||||||||||| ||||||    
T  33438720 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatattacaaacatgtttagaatt 33438651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 47123225 - 47123156
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||| ||||||    
T  47123225 aaggatgagagttaggaagattaatattgtccctaaaatgattatccatgttacaaacatgtttagaatt 47123156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 51540574 - 51540643
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||| ||||||    
T  51540574 aaggatgagagttaggaagattaatattgtccctaaaatgactatccaagttacaaacatgtttagaatt 51540643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 33842034 - 33842108
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgt 79  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||| | ||||||||||| | |||||||||    
T  33842034 aaggatgagagttacgaacattaatattgtccttaaaatgactatccatattacaaacatgtttaaaattggtgt 33842108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 50716448 - 50716382
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| ||||||    
T  50716448 gatgagagttaggaagattaatattgtccctaaaatgactattcatgttacaaacatgtttagaatt 50716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 50796399 - 50796465
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| ||||||    
T  50796399 gatgagagttaggaagattaatattgtccctaaaatgactattcatgttacaaacatgtttagaatt 50796465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 501101 - 501170
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||| | ||||||||||| ||||||    
T  501101 aaggatgagagctaggaagattaatattgtccataaaatgactatccattttacaaacatgtttagaatt 501170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 47130591 - 47130522
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||| | ||||||| ||||||||||| ||||||    
T  47130591 aaggatgagagttaggaagattaatattgtccctaaaatgattgtccatgttacaaacatgtttagaatt 47130522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29036002 - 29035922
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    |||||| ||||||||||||||||| |||||| || |||||||||| ||||||||| ||||||||| | |||||| ||||||    
T  29036002 acataatgatgagagttaggaagagtaatatggtccttaaaatgattatccatgttacaaacatgcttagaatttgtgttg 29035922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 35345869 - 35345933
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttca 69  Q
    ||||||||||||||| || ||||||||||| | |||||||||||||||||| |||||||||||||    
T  35345869 aaggatgagagttagaaatattaatattgtccataaaatgactatccatgttacaaacatgttca 35345933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 47769458 - 47769392
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||| |||||  |||||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  47769458 gatgatagttaaaaagattaatatgattcttaaaatgactatccatgttacaaacatgttcagaatt 47769392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 3902766 - 3902835
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| ||||||||||||||| | ||||||||  |||||||| ||||||||||| ||||||    
T  3902766 aaggatgagagttatgaagattaatattgtccataaaatgatcatccatgttacaaacatgtttagaatt 3902835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 28873200 - 28873135
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||| ||||||||||||||| | ||||||||||||| |||| ||||||||||| ||||||    
T  28873200 atgagagttaagaagattaatattgtccctaaaatgactatctatgttacaaacatgtttagaatt 28873135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 34821303 - 34821372
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| | ||||||||||||||||||| | ||||||||||||| |||| ||||||||||| ||||||    
T  34821303 aaggatgaaatttaggaagattaatattgtccataaaatgactatctatgttacaaacatgtttagaatt 34821372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 47739892 - 47739961
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| ||||||||||||||| | | ||||||||||| |||| ||||||||||| ||||||    
T  47739892 aaggatgagagttatgaagattaatattgtcccttaaatgactatctatgttacaaacatgtttagaatt 47739961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51493002 - 51492929
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||||| ||| | ||||||||| | ||||||    
T  51493002 acataaggatgagagttaggaagattaatattgtccataaaataactattcatattacaaacatgattagaatt 51492929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 46624919 - 46624860
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacat 64  Q
    |||||||||||||||||||||||||||| | | |||||||||||| ||||| ||||||||    
T  46624919 aaggatgagagttaggaagattaatattttccataaaatgactatacatgttacaaacat 46624860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 49096186 - 49096249
Alignment:
Q  5 aaggatgagagttaggaagattaatattgtt-cttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||| |||| |||||||||||    
T  49096186 aaggatgagagttaggaagatttatattgttccctaaaatgactatctatgttacaaacatgtt 49096249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 51258603 - 51258540
Alignment:
Q  5 aaggatgagagttaggaagattaatattgtt-cttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||| | |||||||||    
T  51258603 aaggatgagagttatgaagattaatattgttccctaaaatgactatccatgttataaacatgtt 51258540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 43472929 - 43472991
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||| ||||| ||||| |||||    
T  43472929 aaggataagagttaggaagattaatattgtccttaaaatggctatacatgttacaaatatgtt 43472991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 27143376 - 27143445
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||  ||||||||  |||||||| | |||||||| ||||||||||| ||||||||||||||||||    
T  27143376 aaggatgatggttaggaatcttaatattatccttaaaataactatccatgttacaaacatgttcagaatt 27143445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 47979970 - 47980035
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||| | ||| ||||||| ||||    
T  47979970 atgagagttagaaagattaatattgtccttaaaatgactatctatgttataaatatgttcaaaatt 47980035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 52777430 - 52777361
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||| ||||||| ||||||||||||||| | ||||||| |||| ||||| ||||||||||| ||||||    
T  52777430 aaggataagagttaagaagattaatattgtccctaaaatggctatacatgttacaaacatgtttagaatt 52777361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29048545 - 29048466
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    |||||||||| ||||||| ||||||||||||| | |||||||| ||| | ||||| |||||||| ||||||||| ||||||    
T  29048545 acataaggataagagttatgaagattaatattatccttaaaataactgt-catgttacaaacatattcagaatttgtgttg 29048466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 48304131 - 48304008
Alignment:
Q  69 agaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcaccatg-gaaaaatggtgtttaggggggtgttcagattctataatccgaaa 167  Q
    |||||||||| ||||| |||| |||||||||||| |  | ||||||| |||||||  |||||||||||| | |||||| ||| |||| | ||||| ||||    
T  48304131 agaattggtgatggtgctgtctggattacgtaatccggattgcatcaccaccatgaaaaaaatggtgttga-gggggttttcggattatgtaatctgaaa 48304033  T
Q  168 aaatcaaatagcacaccctattttt 192  Q
    ||||||  || ||||||||||||||    
T  48304032 aaatcatgtaacacaccctattttt 48304008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 35345939 - 35346005
Alignment:
Q  125 aaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    |||||||||||||| |||| |||||| ||| ||||||| |||||| ||||||||| ||||||||||||    
T  35345939 aaaaatggtgtttacgggg-tgttcaaattatataatctgaaaaattcaaatagcgcaccctattttt 35346005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 2358582 - 2358644
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||| ||||||||||||||||||||||| | ||||||| |||| ||||| ||||| |||||    
T  2358582 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 2358644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 29035882 - 29035844
Alignment:
Q  36 cttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  29035882 cttaaaatgactatccatgttacaaacatgttcagaatt 29035844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 39150008 - 39149946
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||||||| |||||||||||   ||||||||||| | |||| |||||||||||    
T  39150008 aaggatgagagttaggaaaattaatattgtctctaaaatgactaccaatgttacaaacatgtt 39149946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 46622759 - 46622805
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgt 55  Q
    |||||||| ||||||||||||||||| | ||||||||||||||||||    
T  46622759 atgagagtaaggaagattaatattgtccctaaaatgactatccatgt 46622805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 30721880 - 30721929
Alignment:
Q  124 gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatca 173  Q
    ||||||||||||||||||| |||||| |||| | ||||||||||||||||    
T  30721880 gaaaaatggtgtttaggggagtgttcggattatgtaatccgaaaaaatca 30721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 5127861 - 5127921
Alignment:
Q  7 ggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||| || ||||||||||||||| | |||||||  ||||||||| |||||||||||    
T  5127861 ggatgagagctatgaagattaatattgtccataaaatggatatccatgttacaaacatgtt 5127921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 26053485 - 26053557
Alignment:
Q  10 tgagagttaggaagattaatattgttct-taaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    ||||| |||||||||||| ||||||||  ||||||||||||||| || | ||||||||| |||||| ||||||    
T  26053485 tgagaattaggaagattagtattgttccctaaaatgactatccaagttataaacatgtttagaatttgtgttg 26053557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 43420110 - 43420166
Alignment:
Q  25 ttaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    ||||||| ||||||||||||| ||||||||| |||||| |||||| |||| ||||||    
T  43420110 ttaatatggttcttaaaatgattatccatgttacaaacgtgttcataatttgtgttg 43420166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 45712053 - 45712113
Alignment:
Q  14 agttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||| ||  ||||||||| ||||||||| ||||||||| ||| ||||    
T  45712053 agttaggaagattaatatggtctttaaaatgattatccatgttacaaacatgatcataatt 45712113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 512214 - 512277
Alignment:
Q  11 gagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||| |||||||| ||  ||||||||||||||||||| | ||||||||||| ||||    
T  512214 gagagttatgaatattaatatggtctttaaaatgactatccatgttataaacatgttcataatt 512277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 4508891 - 4508861
Alignment:
Q  204 ggattacaaaatccgaattggtgaaaaactc 234  Q
    |||||||||||||||||||||||||||||||    
T  4508891 ggattacaaaatccgaattggtgaaaaactc 4508861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 32024979 - 32024949
Alignment:
Q  204 ggattacaaaatccgaattggtgaaaaactc 234  Q
    |||||||||||||||||||||||||||||||    
T  32024979 ggattacaaaatccgaattggtgaaaaactc 32024949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 44085434 - 44085514
Alignment:
Q  63 atgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcaccatg--gaaaaatggtgtttaggg 141  Q
    ||||| |||||||||| | |||||||| ||||||||||||    | |||||||||||||||   |||||||||||||||||    
T  44085434 atgtttagaattggtgcttgtgttgtctggattacgtaatctggattgcatcagcaccatgaaaaaaaatggtgtttaggg 44085514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 46555417 - 46555380
Alignment:
Q  132 gtgtttaggggggtgttcagattctataatccgaaaaa 169  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  46555417 gtgtttaagggggtgttcagattctataatccaaaaaa 46555380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 4300240 - 4300276
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaa 41  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  4300240 aaggatgatagttaggaagattaatattgtccttaaa 4300276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 30721770 - 30721810
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatga 45  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  30721770 aaggataagagttaggaagattaatattgtccctaaaatga 30721810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 47980077 - 47980128
Alignment:
Q  119 ccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaat 171  Q
    |||| ||||||  ||||||||||| ||||||||||||||||||||| ||||||    
T  47980077 ccattgaaaaaaagtgtttagggg-gtgttcagattctataatccggaaaaat 47980128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 6e-43; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 34519488 - 34519719
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgta 100  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||  ||  ||||||||||    
T  34519488 acataaggatgaaagttaggaagattaatattgtccttaaaatgattatccatgttacaaacatgttcagaattgatgttggtgcagtttggattacgta 34519587  T
Q  101 attcaaagtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctatttttggannnnn 200  Q
    || |  | | ||||||||||||| ||||| |||||||| | |||||||   |||||||||||| ||||||| ||||||| | |||||||||| ||         
T  34519588 atccggactacatcagcaccatgaaaaaagggtgttta-gagggtgtttgtattctataatccaaaaaaattaaatagcgcgccctattttttga-gatt 34519685  T
Q  201 nnnggattacaaaatccgaattggtgaaaaactc 234  Q
       |||||| |||||| |||||||||||||||||    
T  34519686 ttcggattataaaatctgaattggtgaaaaactc 34519719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 17766784 - 17766956
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||| ||  ||   ||||| ||||| |    
T  17766784 aaggatgagagttaggaagattaatattgtccttaaaatgactatcaatgttacaaacatgttcaaaattggtgttgatgaagtttagattatgtaatcc 17766883  T
Q  105 aaagtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccg-aaaaaatcaaatag 178  Q
     || ||||||| ||||||  ||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  17766884 gaactgcatcaacaccataaaaaaaaggtgttta--ggggtgttcagattctataatccgaaaaaaatcaaatag 17766956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 9847167 - 9847297
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  9847167 aaggatgaaagttatgaagattaatattgtccttaaaatgactatcaatgttacaaacatgttcagaattggtgttggtgttgtccagattacgtaatcc 9847266  T
Q  105 aaagtgcatcagcaccatggaaaaatggtgt 135  Q
      | ||||||||||||||  ||||| |||||    
T  9847267 ggattgcatcagcaccataaaaaaagggtgt 9847297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 9847375 - 9847543
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||| | || ||||| ||||| |||||||||||||||| ||||| ||||||||||| |    
T  9847375 aaggatgaaatttaggaagattaatattgtccttaaaatgactatcgacgttacaaatatgtttagaattggtgttggtgctgtccagattacgtaatcc 9847474  T
Q  105 aaagtgcatcagcaccatg-gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatca 173  Q
    | | |||||||||||||||  ||||| ||||||| ||  ||||||| |||| | |||| |||||||||||    
T  9847475 agattgcatcagcaccatgaaaaaaaaggtgttt-ggatggtgttcggattatgtaatacgaaaaaatca 9847543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 39447361 - 39447292
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||    
T  39447361 aaggatgagagttaggaagattaatattgtctttaaaatgactatccatgttacaaacatgtttagaatt 39447292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 25715555 - 25715401
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| || || ||| ||||||||||| ||||||||||||||         ||||||||| |||||||||||||||||||||||||||||||||| |    
T  25715555 aaggatgaaagctacgaatattaatattgtccttaaaatgactat---------aaacatgtttagaattggtgttggtgttgtccggattacgtaatcc 25715465  T
Q  105 aaagtgcatcagcaccatg-gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatca 173  Q
      | |||||||||||||||  |||||||||||||      |||||| |||| | ||||||||||||||||    
T  25715464 ggattgcatcagcaccatgaaaaaaatggtgttt------gtgttcggattatgtaatccgaaaaaatca 25715401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 44465682 - 44465751
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||| ||||||    
T  44465682 aaggatgagagttaggaagattaatattgtccctaaaatgactaaccatgttacaaacatgtttagaatt 44465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 32187824 - 32187883
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacat 64  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  32187824 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacat 32187883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 15995071 - 15995137
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  15995071 gatgagagttagaaagattaatattgtccataaaatgactatccatgttacaaacatgtttagaatt 15995137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 41203141 - 41203203
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  41203141 aaggatgaaagttaggaagattaatattgtccataaaatgactatccatgttacaaacatgtt 41203203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 45153746 - 45153808
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||    
T  45153746 aaggatgagagttaagaagattaatattgtccctaaaatgactatccatgttacaaacatgtt 45153808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 33452402 - 33452467
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||| ||||||    
T  33452402 atgagagttaggaagattaatattgtccctaaaatgattatccatgttacaaacatgtttagaatt 33452467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 36875184 - 36875115
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||| | | |||||||||||||||||| |||||| |||| ||||||    
T  36875184 aaggatgagagttaggaagattaatattatccctaaaatgactatccatgttacaaacttgtttagaatt 36875115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 41510384 - 41510450
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaa 72  Q
    |||||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| ||||    
T  41510384 aaggatgagagttaggaagattaatattgtccctaaaatgactat-catgttacaaacatgtttagaa 41510450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 17474758 - 17474816
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||    
T  17474758 atgagagttaggaagattaatattgtctctaaaatgactatccatgttacaaacatgtt 17474816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 5507614 - 5507549
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||  ||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||    
T  5507614 atgagagttgtgaagattaatattgtttataaaatgactatccatgttacaaacatgtttagaatt 5507549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 42894576 - 42894507
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||| |||||||||||||||||||||||| | |||||||| ||||||||| | ||||||||| ||||||    
T  42894576 aaggaagagagttaggaagattaatattgtccctaaaatgattatccatgttagaaacatgtttagaatt 42894507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 19109970 - 19110026
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaa 61  Q
    |||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||    
T  19109970 aaggatgagagttaggaagattaatattatccttaaaatgacgatccatgttacaaa 19110026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 33440465 - 33440540
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    ||||||||| ||||| |||||||||||| | |||||||||| | | |||||||||||||||||||||||| ||||||    
T  33440465 aaggatgag-gttagaaagattaatattatccttaaaatgaattttcatgtaacaaacatgttcagaatttgtgttg 33440540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 16750384 - 16750442
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacat 64  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||| | ||||||||    
T  16750384 aaggatgagagttag-aagattaatattgttcctaaaatgactatccatattacaaacat 16750442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 25715744 - 25715686
Alignment:
Q  20 gaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtg 78  Q
    |||||||||||||||  |||||||||||||| |||| ||||||||||||||| ||||||    
T  25715744 gaagattaatattgtctttaaaatgactatcaatgttacaaacatgttcagagttggtg 25715686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 38066633 - 38066703
Alignment:
Q  10 tgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgtt 80  Q
    ||||||| | ||||||||||||||| |||||||||||||||||| | |||||||| || |||||| |||||    
T  38066633 tgagagtaatgaagattaatattgtccttaaaatgactatccattttacaaacatatttagaatttgtgtt 38066703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 8388850 - 8388781
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | ||| ||| | |||||||| |||||||| || ||||||    
T  8388850 aaggatgagagttaggaagattaatattgtccataagatggcaatccatgttacaaacatctttagaatt 8388781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 25217730 - 25217799
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||| |||||||||||||||||| ||||| |  ||||||||||||||||  ||||||||||| ||||||    
T  25217730 aaggaagagagttaggaagattaaaattgtccccaaaatgactatccatgctacaaacatgtttagaatt 25217799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 34517300 - 34517231
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||||| || |||||||||||||| |||||||||||||||||| ||  ||||||| ||||||    
T  34517300 aaggatgaaagttatgatgattaatattgttcataaaatgactatccatgttaccgacatgtttagaatt 34517231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34817304 - 34817227
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtg 78  Q
    |||| ||||||| |||||||||||||||||| || |||| | ||  ||||||||| ||||||| ||||||||||||||    
T  34817304 acatgaggatgatagttaggaagattaatatggtccttacattggttatccatgttacaaacaagttcagaattggtg 34817227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 30763845 - 30763798
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgt 55  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  30763845 gatgagagttaggaagattaatattgtccataaaatgactatctatgt 30763798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 33367074 - 33367029
Alignment:
Q  57 acaaacatgttcagaattggtgttggtgttgtccggattacgtaat 102  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||    
T  33367074 acaaacatgttcagaattggtgctggtgctatccggattacgtaat 33367029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 19110085 - 19110152
Alignment:
Q  124 gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    |||||| ||||||||||||| || ||||||||||||||| |||||||||||  | ||| ||||||||||    
T  19110085 gaaaaagggtgtttaggggg-tgatcagattctataatcagaaaaaatcaaggaacacgccctattttt 19110152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 41854859 - 41854903
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactat 49  Q
    |||||||||||||||||||||||||||||| | | ||||||||||    
T  41854859 aaggatgagagttaggaagattaatattgtccctgaaatgactat 41854903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42478946 - 42478906
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaa 41  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  42478946 acataaggatgagagttaggaagattaatatggtccttaaa 42478906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 38308880 - 38308931
Alignment:
Q  141 ggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    ||||||||| |||| ||||||||| |||||||||||||| | ||||||||||    
T  38308880 ggggtgttcggattatataatccggaaaaatcaaatagcgcgccctattttt 38308931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 175
Target Start/End: Complemental strand, 45293716 - 45293681
Alignment:
Q  140 gggggtgttcagattctataatccgaaaaaatcaaa 175  Q
    ||||||||||||||||||||||||||||||| ||||    
T  45293716 gggggtgttcagattctataatccgaaaaaagcaaa 45293681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 37773771 - 37773829
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaaca 63  Q
    ||||||||||||||| |||||||| || || |||||| || |||||||||| |||||||    
T  37773771 aaggatgagagttagaaagattaacatagtccttaaactggctatccatgttacaaaca 37773829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 37773895 - 37773924
Alignment:
Q  141 ggggtgttcagattctataatccgaaaaaa 170  Q
    ||||||||||||||||||||||||||||||    
T  37773895 ggggtgttcagattctataatccgaaaaaa 37773924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 43318940 - 43319064
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| ||||||||||| |    
T  43318940 aaggatgaaagttaggaagattaatattgttcttaaaatgactatcaatgttacaaacatgttcagaattggtgctggtgttgtccagattacgtaatcc 43319039  T
Q  105 aaagtgcatcagcaccatggaaaaa 129  Q
      | ||||||||||||||| |||||    
T  43319040 ggattgcatcagcaccatgaaaaaa 43319064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 800552 - 800669
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||| |    
T  800552 aaggatgagagttaggaaaattaatattgtcctaaaaatgactatccatgctacaaacatgttttgaattggtgttggtgttgtccggattacgtaatcc 800651  T
Q  105 aaagtgcatcagcaccat 122  Q
     || ||||||||||||||    
T  800652 gaactgcatcagcaccat 800669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 43319151 - 43319319
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| || || ||||||||||||| | ||||||||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||||| |    
T  43319151 aaggatgaaagctatgaagattaatattatccttaaaatgactatcaatgttacaaacatgttcagaattggtgatggtgctgtccggattacgtaatcc 43319250  T
Q  105 aaagtgcatcagcaccatggaaaaatg-gtgtttaggggggtgttcagattctataatccgaaaaaatca 173  Q
      | ||||||||||||||| ||||| | ||||||| |||||| ||| |||| | ||||||||||||||||    
T  43319251 ggattgcatcagcaccatgaaaaaaagagtgttta-gggggttttcggattatgtaatccgaaaaaatca 43319319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 9445846 - 9445964
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||||  ||||| ||||| |||||||||| ||||||||||||||||||||||| |    
T  9445846 aaggatgagagttaggaagattaacattctccttaaaatgactatccatgctacaaagatgtttagaattggtgctggtgttgtccggattacgtaatcc 9445945  T
Q  105 aaagtgcatcagcaccatg 123  Q
    ||| |  ||||||||||||    
T  9445946 aaactatatcagcaccatg 9445964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 234
Target Start/End: Original strand, 800781 - 800985
Alignment:
Q  28 atattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcaccatggaaa 127  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||||| |||||  |||||  ||||||||| |  |   || || ||||||  |||    
T  800781 atattgtccttaaaatgactatccatgttataaacatgttcagaattggtgctggtgcagtccgcgttacgtaatccggacatcaccaacaccataaaaa 800880  T
Q  128 aatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctatttttggannnnnnnnggattacaaaatccgaattggtga 227  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||   | |||||||||| ||        ||||||||||||||||||| ||||    
T  800881 aatggtgttta-gggggtgttcggattctataatccgaaaaaatcaaataaagcgccctattttttga-gattttcggattacaaaatccgaattagtga 800978  T
Q  228 aaaactc 234  Q
    |||||||    
T  800979 aaaactc 800985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 9446055 - 9446172
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| || || ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| ||||  ||| ||||||||||||| |    
T  9446055 aaggatgaaagctaagaagattaatattgtccttaaaatgactatccatgttataaacatgttcagaattggtgctggtactgttcggattacgtaatcc 9446154  T
Q  105 aaagtgcatcagcaccat 122  Q
     || ||||||||||||||    
T  9446155 gaactgcatcagcaccat 9446172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 17000577 - 17000508
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  17000577 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 17000508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 41584625 - 41584694
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  41584625 aaggatgagagttaggaagattaatattgtccataaaatgactatccatgttacaaacatgtttagaatt 41584694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 52744803 - 52744865
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  52744803 aaggatgagagttaggaagattaatgttgttcctaaaatgactatccatgttacaaacatgtt 52744865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 45046810 - 45046879
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||| ||||||||||| ||||||    
T  45046810 aaggatgagagttaggaagattaatattgtccctgaaatgactatccatgttacaaacatgtttagaatt 45046879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 32817571 - 32817633
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||| |||||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  32817571 aaggatgggagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtt 32817633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 7011409 - 7011340
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||||||| | ||||||||| ||||||    
T  7011409 aaggatgagagttaagaagattaatattgtccctaaaatgactatccatgttagaaacatgtttagaatt 7011340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 49677686 - 49677613
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||| |||||||||||||||||||||||||| | ||||||||||||| |||| ||||||||| | ||||||    
T  49677686 acataagaatgagagttaggaagattaatattgtccctaaaatgactatctatgttacaaacatggttagaatt 49677613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 34006460 - 34006400
Alignment:
Q  5 aaggatgagagttaggaagattaatattgtt-cttaaaatgactatccatgtaacaaacat 64  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  34006460 aaggatgagagttaggaagattaatattgttccctaaaatgactatccatgttacaaacat 34006400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 40650635 - 40650695
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatg 65  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||    
T  40650635 aaggatgagagttaggaagattaatattgtccctaaaatgattatccatgttacaaacatg 40650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 45567852 - 45567919
Alignment:
Q  7 ggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||| |||||||||||||| | |||||||||||||||| | ||||||||||| ||||||    
T  45567852 ggatgagagttagaaagattaatattgtccctaaaatgactatccatattacaaacatgtttagaatt 45567919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 8364206 - 8364145
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||| |||||||||| || ||||||||||||||||||| |||||||||||    
T  8364206 aaggatgagagttagga-gattaatattatttttaaaatgactatccatgttacaaacatgtt 8364145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 44573057 - 44573119
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||| |||||||||||||| | |||||||||||| ||||| |||||||||||    
T  44573057 aaggatgagagttagaaagattaatattgtccctaaaatgactattcatgttacaaacatgtt 44573119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 34162690 - 34162751
Alignment:
Q  13 gagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||| | ||||||| |||||||||| ||||||||||| ||||||    
T  34162690 gagttaggaagattaatattgtccctaaaatggctatccatgttacaaacatgtttagaatt 34162751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 3561298 - 3561457
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaa 107  Q
    |||||||||||| |||||||||| ||| |||||||| |||||| |||| ||||||||||||| |||| ||| || |   || |||||||  |||||| ||    
T  3561298 gatgagagttagaaagattaatactgtccttaaaattactatctatgttacaaacatgttcataatttgtgctgatacagttcggattatataattcgaa 3561397  T
Q  108 gtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaa 170  Q
      |  |     || | |||||| |||||||||| |||||||||||||||||||||||||||||    
T  3561398 ccgttt---ttcccttgaaaaagggtgtttaggagggtgttcagattctataatccgaaaaaa 3561457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 25563374 - 25563438
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttca 69  Q
    ||||||||| |||| |||| |||||||||| |||||||||||||||||| | |||||||||||||    
T  25563374 aaggatgagggttatgaagcttaatattgtccttaaaatgactatccatattacaaacatgttca 25563438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 15069801 - 15069863
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||| |||||| ||||||||||||||   |||||||||||||||||| |||||||||||    
T  15069801 aaggatgaaagttagtaagattaatattgtctctaaaatgactatccatgttacaaacatgtt 15069863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 24472791 - 24472849
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||| |||||||||| |||||||| | |||||||||||||||||||| |||||||||||    
T  24472791 atgatagttaggaagcttaatattttccttaaaatgactatccatgttacaaacatgtt 24472849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 40907897 - 40907963
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||| ||||||||||||||||||||||   |||||||| ||||||||| ||||||||||| ||||||    
T  40907897 gatgggagttaggaagattaatattgtctctaaaatgattatccatgttacaaacatgtttagaatt 40907963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 42546166 - 42546097
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||| | |||||||||| |   |||||||||||||||||| ||||||||||| ||||||    
T  42546166 aaggatgagagttagaatgattaatattatctctaaaatgactatccatgttacaaacatgtttagaatt 42546097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 27795027 - 27794968
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||| ||||||||||||||||||||| | ||||||||||||| |||| | |||||||||    
T  27795027 gatgatagttaggaagattaatattgtccataaaatgactatctatgttataaacatgtt 27794968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 28866590 - 28866652
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||| ||||||||| | ||| | ||||||| |||||||||| |||||||||||    
T  28866590 aaggatgagagttatgaagattaaaaatgtccataaaatggctatccatgttacaaacatgtt 28866652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 30829479 - 30829525
Alignment:
Q  57 acaaacatgttcagaattggtgttggtgttgtccggattacgtaatt 103  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  30829479 acaaacatgttcagaatcggtgctggtgctgtccggattacgtaatt 30829525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 38885412 - 38885371
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgac 46  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  38885412 aaggatgagagttaggaaaattaatattgtccttaaaatgac 38885371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 49786467 - 49786411
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaa 61  Q
    |||||| ||||||||||||||||||||||| | ||||||| |||| ||||| |||||    
T  49786467 aaggataagagttaggaagattaatattgtccataaaatggctatacatgttacaaa 49786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 234
Target Start/End: Original strand, 9446207 - 9446237
Alignment:
Q  204 ggattacaaaatccgaattggtgaaaaactc 234  Q
    |||||||||||||||||||||||||||||||    
T  9446207 ggattacaaaatccgaattggtgaaaaactc 9446237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 18583504 - 18583566
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||| ||||||||| ||||||||||||| | ||||||| |||| ||||| ||||| |||||    
T  18583504 aaggataagagttaggcagattaatattgtccctaaaatggctatacatgttacaaatatgtt 18583566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 23442937 - 23442875
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||| ||||||||||||||||||||||| | ||||||| || | ||||| ||||| |||||    
T  23442937 aaggataagagttaggaagattaatattgtccctaaaatggctgtacatgttacaaatatgtt 23442875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 8704482 - 8704551
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtg 78  Q
    |||| |||||||||||||||||   | |||||||||||||||||||  | || ||||||||||| |||||    
T  8704482 atgatagttaggaagattaataagatccttaaaatgactatccatgatataatcatgttcagaactggtg 8704551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 24471327 - 24471372
Alignment:
Q  57 acaaacatgttcagaattggtgttggtgttgtccggattacgtaat 102  Q
    ||||||||||||||||||| || ||||| |||||| ||||||||||    
T  24471327 acaaacatgttcagaattgatgctggtgctgtccgaattacgtaat 24471372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 26723455 - 26723510
Alignment:
Q  12 agagttaggaagattaatattgtt-cttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||    
T  26723455 agagtaaggaagattaatattgttccctaaaatgactat-catgttacaaacatgtt 26723510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 8214462 - 8214646
Alignment:
Q  6 aggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattca 105  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||| |||| ||  |||||  ||  ||||||||||||||     
T  8214462 aggatgagagttaggaagattaatattgtccttaaaatgacaatcgatgttacaaacatgttcataattcgttctggtgcagtttggattacgtaattcg 8214561  T
Q  106 aagtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    || |||||||||||||| ||||||   ||||||  |||||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  8214562 aactgcatcagcaccatagaaaaaatatgttta--ggggtgttcaaattctaaaatccgaaaaaatcaaatagcgcgtcctattttt 8214646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 5731145 - 5731309
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| || || ||||||||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||||| |    
T  5731145 aaggatgaaagctaagaagattaatattgtccttcaaatgactatccatgttataaacatgttcagaattggtgttggtgctgtcccgattacgtaatcc 5731244  T
Q  105 aaagtgcatcagcaccatggaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaa 170  Q
      |  ||| |||||||||| ||||||||||||||  ||||  ||| |||||||||||| |||||||    
T  5731245 ggacagcaccagcaccatgaaaaaatggtgttta-aggggcattcggattctataatctgaaaaaa 5731309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 8214253 - 8214326
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||||||||||||||||||    
T  8214253 gatgagagttaggaagattaatattgtccttagaatgactatccatgttgcaaacatgttcagaattggtgttg 8214326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 129
Target Start/End: Original strand, 5730941 - 5731060
Alignment:
Q  10 tgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagt 109  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||  ||||||||||| ||||||| || ||||| ||||| ||||||||||| | || |    
T  5730941 tgagagttagaaagattaatattgtatttaaaatgactattcatgctacaaacatgtttagaattgttgctggtggtgtcctgattacgtaatccgaact 5731040  T
Q  110 gcatcagcaccatggaaaaa 129  Q
    ||| || |||||||||||||    
T  5731041 gcaacatcaccatggaaaaa 5731060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 9151995 - 9151926
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  9151995 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 9151926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 28230428 - 28230497
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  28230428 aaggatgagagttaggaagattaatattgtccataaaatgactatccatgttacaaacatgtttagaatt 28230497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 36468497 - 36468566
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  36468497 aaggatgagagttatgaagattaatattgttcctaaaatgactatccatgttacaaacatgtttagaatt 36468566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 42925601 - 42925670
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  42925601 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 42925670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 5278463 - 5278394
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||| ||||    
T  5278463 aaggataagagttaggaagattaatattatccttaaaatgactatccatgttacaaacatgttcaaaatt 5278394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 42865062 - 42865131
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| || ||||||    
T  42865062 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatatttagaatt 42865131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 3936307 - 3936245
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||    
T  3936307 aaggatgagagttaggaagattaatattgtccctaaaatgattatccatgttacaaacatgtt 3936245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 24042148 - 24042217
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||| |||| ||||||||||| ||||||    
T  24042148 aaggatgagagttaggaagattgatattgtccctaaaatgactatcaatgttacaaacatgtttagaatt 24042217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 37518255 - 37518324
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||  ||| ||||||||||| ||||||    
T  37518255 aaggatgagagttaggaagattaatagtgttcctaaaatgactatctctgttacaaacatgtttagaatt 37518324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 192
Target Start/End: Complemental strand, 16278305 - 16278135
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    ||||||| |||| | || |||||||||||| |||||||||||||||||||| |||||||| || ||||||||                |||||||||| |    
T  16278305 aaggatgggagtaaagatgattaatattgtccttaaaatgactatccatgttacaaacatattaagaattgg----------------attacgtaatcc 16278222  T
Q  105 aaagtgcatcagcaccatggaaaaa-tggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
     || ||||||||||||||| || || |||||||||||||  ||||| ||||| |||||| |||||||||||||| | ||||||||||||    
T  16278221 gaactgcatcagcaccatgaaataactggtgtttagggg--tgttcggattccataatctgaaaaaatcaaataacgcaccctattttt 16278135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 19818579 - 19818517
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||||| |||| ||||||    
T  19818579 aaggatgagagttaggaagattaatattgtccctaaaataactatccatgttacaagcatgtt 19818517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 36946252 - 36946320
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||| ||||| |||||||| |||||||||    
T  36946252 aaggatgagagttaggaagcttaatattg-tcttaaaatgattattcatgttacaaacatattcagaatt 36946320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 48776175 - 48776240
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||| | ||||||||||| ||||    
T  48776175 atgagagttaggaagattaatattatccttaaaatcactatccatgttataaacatgttcaaaatt 48776240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 24690294 - 24690354
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatg 65  Q
    |||||||||||||||| ||||||||||||| | ||||||||| |||||||| |||||||||    
T  24690294 aaggatgagagttaggtagattaatattgtccataaaatgacgatccatgttacaaacatg 24690354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43737285 - 43737233
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccat 53  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  43737285 acataaggatcagagttaggaagattaatattgtccctaaaatgactatccat 43737233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 36408564 - 36408501
Alignment:
Q  11 gagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||||||||||||||| | |||||| ||||||||||| ||||||||||| ||||||    
T  36408564 gagagttaagaagattaatattgtccctaaaattactatccatgttacaaacatgtttagaatt 36408501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 1518906 - 1518844
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||| ||||||||||||||| | |||||||| |||| |||| |||||||||||    
T  1518906 aaggatgagagttaagaagattaatattgtccataaaatgattatcgatgttacaaacatgtt 1518844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 19225558 - 19225627
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||| ||||  | | |||||||| ||||||||| ||||||||||| ||||||    
T  19225558 aaggatgagagttaggaagatttatatcatccataaaatgaatatccatgttacaaacatgtttagaatt 19225627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 6467100 - 6467176
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    ||||| |||||||||||| ||||||||||  |||||||| ||||||||| | ||||||||||| |||| | ||||||    
T  6467100 aaggaagagagttaggaaaattaatattgcccttaaaataactatccatattacaaacatgtttagaacttgtgttg 6467176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 7115347 - 7115413
Alignment:
Q  125 aaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    ||||||||||||||||||| | |||||||| |||||| |||||||||||| || | ||||||||||||    
T  7115347 aaaaatggtgtttagggggtt-ttcagattatataattcgaaaaaatcaagtaacgcaccctattttt 7115413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 36629402 - 36629342
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||||||||||||||||| | | ||||||||| |  |||||||||||||||||    
T  36629402 aaggatgagagttaggaagattaatattctccctaaaatgacga--catgtaacaaacatgtt 36629342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 47239680 - 47239726
Alignment:
Q  124 gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaa 170  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  47239680 gaaaaatggtgttttggggggtgttcggattctatagtccgaaaaaa 47239726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 48775803 - 48775745
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||| ||||||||||||||||||||| |||||| ||||||| ||||| |||| ||||||    
T  48775803 atgatagttaggaagattaatattgtccttaaactgactattcatgttacaagcatgtt 48775745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 31985480 - 31985553
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    |||||||||||| |||||||||||||| | |||||||||||| ||||| | ||| ||||| | |||| ||||||    
T  31985480 gatgagagttagaaagattaatattgtccataaaatgactattcatgttaaaaatatgtttaaaatttgtgttg 31985553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 16983702 - 16983760
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaaca 63  Q
    ||||||||||||||||||||||||||||||   |||| ||  ||||||||| |||||||    
T  16983702 aaggatgagagttaggaagattaatattgtctgtaaactggttatccatgttacaaaca 16983760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 47202693 - 47202631
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||| ||||||||||||||||||||||| | ||||| | |||| ||||| ||||| |||||    
T  47202693 aaggataagagttaggaagattaatattgtccctaaaacggctatacatgttacaaatatgtt 47202631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 33151402 - 33151373
Alignment:
Q  5 aaggatgagagttaggaagattaatattgt 34  Q
    ||||||||||||||||||||||||||||||    
T  33151402 aaggatgagagttaggaagattaatattgt 33151373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 6467781 - 6467714
Alignment:
Q  124 gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    |||||| ||||||||||||| ||||| |||| | ||||||||| ||||||  || ||||||||||||||    
T  6467781 gaaaaagggtgtttaggggg-tgttcggattatgtaatccgaacaaatcatgtaacacaccctattttt 6467714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 30861187 - 30861120
Alignment:
Q  124 gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||||| |||  | ||||| ||||||||    
T  30861187 gaaaaaaggtgtttatgggg-tgttcggattctataatccgaaaaaagcaaggaacacacactattttt 30861120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 43185983 - 43185919
Alignment:
Q  3 ataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||| ||||||||||||||  |||||||||| |  ||||||| ||||||||| | |||||||||    
T  43185983 ataagtatgagagttaggaatgttaatattgtccaaaaaatgattatccatgttataaacatgtt 43185919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 25140464 - 25140590
Alignment:
Q  3 ataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaat 102  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||| || | | || ||||||||||    
T  25140464 ataaggatgagagttaggaagattaatattgttcttaaaatgattatacatgttacaaacatgttcagaattggtgttgatgctattcgaattacgtaat 25140563  T
Q  103 tcaaagtgcatcagcaccatggaaaaa 129  Q
     | || ||||| |||||| || |||||    
T  25140564 ccgaactgcattagcaccgtgaaaaaa 25140590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 7817354 - 7817505
Alignment:
Q  40 aaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcaccatggaaaaatggtgtttag 139  Q
    |||||| ||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||    |   || |||||||||| |||||||||||||||    
T  7817354 aaatgattatccatgttataaacatgttcagaattggtgttggtgctgtccagattacgtaatctggacatcaccagcaccatgaaaaaatggtgtttag 7817453  T
Q  140 gggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
     ||| |||||||||||| |||||||||||||||||| ||  ||||||||||||    
T  7817454 aggg-tgttcagattctttaatccgaaaaaatcaaacagggcaccctattttt 7817505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 25140675 - 25140799
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattc 104  Q
    |||||||| || |||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| || || ||| ||||||||||||| |    
T  25140675 aaggatgaaagctaggaagattaatattgtcctcaaaatgactatccatgttacaaacatgttcagaattggtgctgatgctgttcggattacgtaatcc 25140774  T
Q  105 aaagtgcatcagcaccatggaaaaa 129  Q
     || ||||| ||||||||| |||||    
T  25140775 gaactgcattagcaccatgaaaaaa 25140799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 7794198 - 7794351
Alignment:
Q  40 aaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcaccatg-gaaaaatggtgttta 138  Q
    |||||| ||||||||| | ||| ||||||| ||||||||||||||||||||| ||||||||||    |  ||| ||||||||||  ||||||||||||||    
T  7794198 aaatgaatatccatgttataaatatgttcaaaattggtgttggtgttgtccgaattacgtaatctggacagcaccagcaccatgaaaaaaatggtgttta 7794297  T
Q  139 ggggggtgttcagattctataatccg-aaaaaatcaaatagcacaccctattttt 192  Q
     | ||||||||||||||| ||||| | ||||||||||||||| ||||||| ||||    
T  7794298 -gagggtgttcagattctttaatctgaaaaaaatcaaatagcgcaccctaatttt 7794351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 19835724 - 19835658
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  19835724 gatgagagttaggaagattaatattgttcctaaaatgactatccatgttacaaacatgtttagaatt 19835658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 40703871 - 40703802
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  40703871 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 40703802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 41323052 - 41323128
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||| |||||| ||||||    
T  41323052 aaggatgagagttaggaagattaatattgtccataaaatgattatccatgttacaaacatgtttagaatttgtgttg 41323128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 42660338 - 42660432
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaat 102  Q
    ||||| || |||||||||||||||||| ||||||||||||||| || | ||||||||| |||||||||||| ||||| | |||||||||| ||||    
T  42660338 gatgaaagctaggaagattaatattgtccttaaaatgactatcaatattacaaacatgctcagaattggtgctggtgctatccggattacataat 42660432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 25491355 - 25491424
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| ||||||    
T  25491355 aaggatgagagttaggaagattaatattgtccataaaatgactattcatgttacaaacatgtttagaatt 25491424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25752400 - 25752473
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||| |||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  25752400 acataaagatgagagctaggaagattgatattgtccttaaaatgactatccatgttacaaacatgtttagaatt 25752473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 31582382 - 31582451
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  31582382 aaggatgagagttaggaaaattaacattgttcataaaatgactatccatgttacaaacatgtttagaatt 31582451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 48319024 - 48319093
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| |||| ||||||||||| ||||||    
T  48319024 aaggatgagagttaggaagattaatattgtccctaaaatgactatcaatgttacaaacatgtttagaatt 48319093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 53893985 - 53894054
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  53893985 aaggatgagagttagaaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 53894054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 7931863 - 7931795
Alignment:
Q  6 aggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||| ||||||    
T  7931863 aggatgagagttaggaagattaatattgtccctaaaataactatccatgttacaaacatgtttagaatt 7931795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 14474172 - 14474247
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttg 81  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| |||| ||||||    
T  14474172 aaggatgagggttaggaagattaatattgttctt-aaacgactatccatgttacaaacatgttcaaaatttgtgttg 14474247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 25140894 - 25140961
Alignment:
Q  17 taggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtg 84  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| || |||||    
T  25140894 taggaagattaatattgtccttaaaatgactatccatgttacaaacatgttcaaaattgatgctggtg 25140961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 2505991 - 2506053
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  2505991 aaggatgagaattaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtt 2506053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 17933097 - 17933166
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||| ||| | |||||||| ||||||||| ||||||||||| ||||||    
T  17933097 aaggatgagagttaggaagattaataatgtccctaaaatgattatccatgttacaaacatgtttagaatt 17933166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 25538939 - 25539008
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| ||| ||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  25538939 aaggatgagagttaagaaaattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 25539008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 38536373 - 38536308
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| ||||||    
T  38536373 atgagagttaggaagattaatattgtccataaaatgactattcatgttacaaacatgtttagaatt 38536308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 55052579 - 55052648
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||||||||||||||| ||||| | |||||||||||||||||| ||||||||||| ||||||    
T  55052579 aaggatgatagttaggaagattaacattgtccctaaaatgactatccatgttacaaacatgtttagaatt 55052648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 8106601 - 8106538
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttct-taaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||||| |||||||||||    
T  8106601 aaggatgagagttagaaagattaacattgttctctaaaatgactatccatgttacaaacatgtt 8106538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 27181481 - 27181542
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||| |||||||||| || ||||||||||||||||||| |||||||||||    
T  27181481 aaggatgagagttagga-gattaatattatttttaaaatgactatccatgttacaaacatgtt 27181542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 3703209 - 3703278
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||| |||| ||||| ||||| ||||||    
T  3703209 aaggatgagagttatgaagattaatattcttcctaaaatgactatctatgttacaaaaatgtttagaatt 3703278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 41413065 - 41413120
Alignment:
Q  12 agagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| ||||| |||||    
T  41413065 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 41413120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 47874017 - 47873955
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||| ||| ||||||||||||||| | |||||||||||||||||| | |||||||||    
T  47874017 aaggatgagaattaagaagattaatattgtccctaaaatgactatccatgttataaacatgtt 47873955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 7863648 - 7863579
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||| | ||||||||| ||||||||||| |||||||||| | ||||||| ||||||||||| ||||||    
T  7863648 aaggataaaagttaggaatattaatattgtccttaaaatgattgtccatgttacaaacatgtttagaatt 7863579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 27879751 - 27879686
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| |||||||| || ||||||||||| || ||||| |||| |||||||||||||    
T  27879751 atgagagttaggaatattaatatggtccttaaaatgaccattcatgttacaagcatgttcagaatt 27879686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 46440234 - 46440303
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| |||||||| |||||| | |||||||| ||||||||| |||| |||||| ||||||    
T  46440234 aaggatgagagttatgaagattagtattgtccctaaaatgaatatccatgttacaaccatgtttagaatt 46440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 27742073 - 27742136
Alignment:
Q  5 aaggatgagagttaggaagattaatattgtt-cttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||  |||| |||||||||||    
T  27742073 aaggatgagagttaggaagattaatattgttccctaaaataactatttatgttacaaacatgtt 27742136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 27743063 - 27742967
Alignment:
Q  93 attacgtaattcaaagtgcatcagcaccatgga----aaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacacccta 187  Q
    |||||||||| | || ||||||||||||||| |    ||||  |||||||||||| |  ||||| ||||||||||||||||||||||||||||| ||||    
T  27743063 attacgtaatccgaactgcatcagcaccatgaagaaaaaaaaagtgtttagggggtt--tcagaatctataatccgaaaaaatcaaatagcacatccta 27742967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 34973071 - 34973009
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||| ||||||||||||||||||||||| | ||||||| |||| ||||| ||||| |||||    
T  34973071 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 34973009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 47784191 - 47784138
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaaca 63  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| | |||||||    
T  47784191 atgagagttagga-gattaatattgtccttaaaatgactatccatattacaaaca 47784138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 52089388 - 52089330
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||| ||||||||| ||||||||||| |  ||||||||||||||||| |||||||||||    
T  52089388 atgaaagttaggaaaattaatattgtcccaaaaatgactatccatgttacaaacatgtt 52089330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 48095945 - 48095989
Alignment:
Q  125 aaaaatggtgtttaggggggtgttcagattctataatccgaaaaaa 170  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  48095945 aaaaatggtgtttagggga-tgttcagattctataatccgaaaaaa 48095989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 6228773 - 6228823
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgt 55  Q
    |||||| ||||||||||||||||||||||| | ||||||| |||| |||||    
T  6228773 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgt 6228823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 32442017 - 32441955
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||| |||||||||||||||||||||||  ||||||||  ||| ||||| ||||| |||||    
T  32442017 aaggataagagttaggaagattaatattgtctttaaaatggttatacatgttacaaatatgtt 32441955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 47456811 - 47456749
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaaca 63  Q
    |||||||||||||| |||||||||||||||| || |||||| |   ||||||||| |||||||    
T  47456811 acataaggatgagatttaggaagattaatatggtccttaaactagttatccatgttacaaaca 47456749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 32601035 - 32600978
Alignment:
Q  17 taggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||| |||||||| || ||||||||||||  |||||| |||| |||||||||||||    
T  32601035 taggaatattaatatggtccttaaaatgactggccatgttacaagcatgttcagaatt 32600978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 49002822 - 49002883
Alignment:
Q  13 gagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||| | | ||||||||||||  |||| |||||||| || ||||||    
T  49002822 gagttaggaagattaatattttccataaaatgactatttatgttacaaacatatttagaatt 49002883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 54631452 - 54631481
Alignment:
Q  5 aaggatgagagttaggaagattaatattgt 34  Q
    ||||||||||||||||||||||||||||||    
T  54631452 aaggatgagagttaggaagattaatattgt 54631481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 6003633 - 6003677
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactat 49  Q
    |||||| ||||||||||||||||||||| | | ||||||||||||    
T  6003633 aaggataagagttaggaagattaatattatccctaaaatgactat 6003677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 50392453 - 50392513
Alignment:
Q  69 agaattggtgttggtgttgtccggattacgtaattcaaagtgcatcagcaccatggaaaaa 129  Q
    |||||||||| ||||| |||| |||||||||||| |  | ||||||||||||||| |||||    
T  50392453 agaattggtgatggtgctgtctggattacgtaatccggattgcatcagcaccatgaaaaaa 50392513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 17501065 - 17500968
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaat 102  Q
    |||||||| | ||||||||||||||| ||| |||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  17501065 aaggatgaaaattaggaagattaataatgtccttaaaatgactattcatgttacaaacatgttcagatttggtgctggtgttgtccggattacgtaat 17500968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 2539650 - 2539581
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  2539650 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgttcagaatt 2539581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 17501280 - 17501151
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactat-----ccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgt 99  Q
    |||||||| || |||||||||||||||||| ||||||||||||||     |||||| |||||||||||||||||||||  || || ||||||||||||||    
T  17501280 aaggatgaaagctaggaagattaatattgtccttaaaatgactatactatccatgttacaaacatgttcagaattggtcctgatgctgtccggattacgt 17501181  T
Q  100 aattcaaagtgcatcagcaccatggaaaaa 129  Q
    ||| | || ||||| ||||||||| |||||    
T  17501180 aatccgaactgcattagcaccatgaaaaaa 17501151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14587516 - 14587589
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  14587516 acataaggattagagttaggaagattaatattgtccgtaaaatgactatccatgttacaaacatgtttagaatt 14587589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 23406995 - 23406926
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  23406995 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 23406926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 5699764 - 5699689
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgtt 80  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| || |||||| |||||    
T  5699764 aaggatgagagttatgaagattaatattgtccttaaaatgactatccatgttacaaacatatttagaatttgtgtt 5699689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 1945490 - 1945559
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||||| ||||||    
T  1945490 aaggatgagagttaggaagattaatattatccctaaaatgactatccatgttacaaacatgtttagaatt 1945559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 21514991 - 21515050
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacat 64  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  21514991 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacat 21515050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 4508262 - 4508331
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||||| | ||||||||||| ||||||    
T  4508262 aaggatgaaagttaggaagattaatattgtccctaaaatgactatccatattacaaacatgtttagaatt 4508331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13800983 - 13801056
Alignment:
Q  1 acataaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||| |||| ||||||||||| ||||||    
T  13800983 acataatgatgagagttaggaagattaatattgttcataaaatgataatctatgttacaaacatgtttagaatt 13801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 236990 - 236924
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||| || |||||||||| | ||||||| ||||||||||||| ||||    
T  236990 gatgagagttaggaagattaatatggtccttaaaatgattttccatgttacaaacatgttcataatt 236924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 3717243 - 3717312
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||| || ||||||||||| | |||||||||||||||||| ||| ||||||| ||||||    
T  3717243 aaggatgagagttagaaaaattaatattgtccctaaaatgactatccatgttacagacatgtttagaatt 3717312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 17264609 - 17264540
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||||||||||||| |||||||| | ||||||||||| ||||||  |||||||||| ||||||    
T  17264609 aaggatgagagttaggaagataaatattgtccctaaaatgactaaccatgttgcaaacatgtttagaatt 17264540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 2813185 - 2813254
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||||||||||||||||| | | |||||||||||| ||||| | ||| ||||| ||||||    
T  2813185 aaggatgagagttaggaagattaatattatccataaaatgactattcatgttaaaaatatgtttagaatt 2813254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 7734286 - 7734355
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||||||||||||||||||||| | ||||||||| || | ||| ||||||||||| ||||||    
T  7734286 aaggatgatagttaggaagattaatattgtccataaaatgacaattcgtgttacaaacatgtttagaatt 7734355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 29519478 - 29519409
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| ||||||||||||||||||| | | ||||||||| || ||||| ||||||||||| ||||||    
T  29519478 aaggatgatagttaggaagattaatattttccataaaatgacaattcatgttacaaacatgtttagaatt 29519409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 34528635 - 34528570
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||||||| |||||||||||| | ||| |||||| ||||||||| ||||||||||||| ||||    
T  34528635 atgagagttagaaagattaatattatccttgaaatgaatatccatgttacaaacatgttcataatt 34528570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 29289703 - 29289756
Alignment:
Q  125 aaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagc 179  Q
    |||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||    
T  29289703 aaaaatggtgtttaagggg-tgttcagattatataatccggaaaaatcaaatagc 29289756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 24604321 - 24604390
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||| |||||||||||||||||||||   |||||||||||||  ||| ||||| ||||| ||||||    
T  24604321 aaggatgaaagttaggaagattaatattgtctctaaaatgactatctttgttacaaatatgtttagaatt 24604390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 32044581 - 32044537
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactat 49  Q
    |||||| ||||||||||||||||||||||| | ||||||||||||    
T  32044581 aaggataagagttaggaagattaatattgtccctaaaatgactat 32044537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 9905314 - 9905251
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttct-taaaatgactatccatgtaacaaacatgtt 67  Q
    |||||| ||||| ||||| |||||||||||||  |||||||| ||||||||| |||||||||||    
T  9905314 aaggataagagtaaggaaaattaatattgttccctaaaatgattatccatgttacaaacatgtt 9905251  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1439194 - 1439164
Alignment:
Q  1 acataaggatgagagttaggaagattaatat 31  Q
    |||||||||||||||||||||||||||||||    
T  1439194 acataaggatgagagttaggaagattaatat 1439164  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 6704089 - 6704122
Alignment:
Q  8 gatgagagttaggaagattaatattgttcttaaa 41  Q
    ||||||||||||||||||||||||||| ||||||    
T  6704089 gatgagagttaggaagattaatattgtccttaaa 6704122  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 29289585 - 29289654
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||| |||||||||| ||||||||||| | |||||| | |||| |||| ||||| ||||||| ||||    
T  29289585 aaggatgcgagttaggaaaattaatattgtccataaaattaatatctatgttacaaagatgttcataatt 29289654  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 10310395 - 10310439
Alignment:
Q  9 atgagagttaggaagattaatattgttcttaaaatgactatccat 53  Q
    |||| |||||||||||||||||| || |||||| |||||||||||    
T  10310395 atgatagttaggaagattaatatggtccttaaattgactatccat 10310439  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 13801118 - 13801170
Alignment:
Q  141 ggggtgttcagattctataatccgaaaaaatcaaatagcacaccctatttttg 193  Q
    ||||||||| |||| ||||||| ||||||||||||| || | |||||||||||    
T  13801118 ggggtgttcggattatataatctgaaaaaatcaaatggcgcgccctatttttg 13801170  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 29519372 - 29519305
Alignment:
Q  124 gaaaaatggtgtttaggggggtgttcagattctataatccgaaaaaatcaaatagcacaccctattttt 192  Q
    ||||||||||||||  |||| |||| | ||| ||||||| |||||||||||| ||| ||||||||||||    
T  29519372 gaaaaatggtgtttttgggg-tgtttaaattatataatctgaaaaaatcaaacagcgcaccctattttt 29519305  T

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Target: scaffold0016 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 205766 - 205863
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggtgttgtccggattacgtaat 102  Q
    |||||||| || |||||||||||||||| | ||||||||||||| | |||| |||||||||||||||||||||| ||||| |||| ||||||||||||    
T  205766 aaggatgaaagctaggaagattaatattatccttaaaatgactaccaatgttacaaacatgttcagaattggtgctggtgatgtctggattacgtaat 205863  T

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Target: scaffold0182 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 23301 - 23239
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  23301 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtt 23239  T

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Target: scaffold0027 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 141923 - 141992
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    ||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  141923 aaggatgggagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatt 141992  T

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Target: scaffold0010 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 140684 - 140622
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| |||| |||||||||||    
T  140684 aaggatgagagttaggaagattaatattgtccctaaaatgactatcaatgttacaaacatgtt 140622  T

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Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 59551 - 59497
Alignment:
Q  13 gagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgtt 67  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||    
T  59551 gagttagaaagattaatattgtccttaaaatgactatccatgtcacaaacatgtt 59497  T

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Target: scaffold0006; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 59938 - 60008
Alignment:
Q  13 gagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaattggtgttggt 83  Q
    ||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||| |||| ||| ||||    
T  59938 gagttaggaagattaatattgtctttaaaatgactatctatgttacaaacatgttcaaaatttgtgctggt 60008  T

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Target: scaffold0508 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 3355 - 3424
Alignment:
Q  5 aaggatgagagttaggaagattaatattgttcttaaaatgactatccatgtaacaaacatgttcagaatt 74  Q
    |||||||||||||| ||||||||||||||| | |||||||| |||| |||| ||||||||||| ||||||    
T  3355 aaggatgagagttacgaagattaatattgtccctaaaatgattatcgatgttacaaacatgtttagaatt 3424  T

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Target: scaffold0137 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 9476 - 9518
Alignment:
Q  24 attaatattgttcttaaaatgactatccatgtaacaaacatgt 66  Q
    ||||||||||| | |||||||||||||||||| ||||||||||    
T  9476 attaatattgtccataaaatgactatccatgttacaaacatgt 9518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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