View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14691_low_13 (Length: 331)
Name: NF14691_low_13
Description: NF14691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14691_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 44 - 316
Target Start/End: Complemental strand, 51201903 - 51201631
Alignment:
| Q |
44 |
tttctttattcttctaatatttttgctgttctaagaagaagtttatttaactgtgttaattaagggaagtactcaacattgtaggtgccatgacgatgct |
143 |
Q |
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| T |
51201903 |
tttctttattcttctaatatttttgctgttctaagaagaagtttatttaactgtgttaattaagggaagtactcaacattgtaggtgccatgacgatgct |
51201804 |
T |
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| Q |
144 |
ctaaattgttgctagtcataaagtaactggttgtggggtattcactttaattagtcccgatcgtgttggtgaatccttgtcttgagctgttgtattattg |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51201803 |
ctaaattgttgctagtcataaagtaactggttgtggggtattcactttaattagtcccgatcgtgttggtgaatccttgtcttgagctgttgtattattg |
51201704 |
T |
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| Q |
244 |
agctgctgtttttaataacaaattgttcttgctggatttattgatcttgtaaactttttgcgcatagtttatg |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51201703 |
agctgctgtttttaataacaaattgttcttgctggatttattgatcttgtaaactttttgcgcatagtttatg |
51201631 |
T |
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