View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14691_low_21 (Length: 251)
Name: NF14691_low_21
Description: NF14691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14691_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 22790523 - 22790285
Alignment:
| Q |
2 |
ctcgagttgaactgtgctgaatcaagagttataggttgtagacttgtgtgtattcttcttattcctcaccaaattcaagcaa--tacgtaccatatatat |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
22790523 |
ctcgagttgaactgtgctgaatcaagagttataggttgtagacttgtgtgtattcttcttattcctcaccaaattcaagcaagatacgtaccatatatat |
22790424 |
T |
|
| Q |
100 |
aatataaacacaatatagaagttgatttctagaaatgattgataaataatggtgtagaagaggatgacaaatgagaaaaatatattatgaaatgaaaaca |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22790423 |
aatataaacacaatatagaagttgatttctagaaatgattgataaataatggtgtagaagaggatgacaaatgagaaaaatatattatgaaatgaaaaca |
22790324 |
T |
|
| Q |
200 |
cgaataattgtctaaaaggtttgggtttccatacctatg |
238 |
Q |
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||||||||||||| ||||||||||||||||||||||||| |
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| T |
22790323 |
cgaataattgtctcaaaggtttgggtttccatacctatg |
22790285 |
T |
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