View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14691_low_29 (Length: 224)

Name: NF14691_low_29
Description: NF14691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14691_low_29
NF14691_low_29
[»] chr1 (24 HSPs)
chr1 (1-224)||(30795727-30795949)
chr1 (1-121)||(10427426-10427545)
chr1 (1-104)||(10427297-10427400)
chr1 (179-224)||(17283977-17284022)
chr1 (49-121)||(10427224-10427296)
chr1 (1-121)||(12294388-12294507)
chr1 (179-224)||(10132434-10132479)
chr1 (1-48)||(35632991-35633038)
chr1 (178-224)||(5907825-5907871)
chr1 (178-224)||(12783690-12783736)
chr1 (190-224)||(13615613-13615647)
chr1 (190-224)||(17221521-17221555)
chr1 (190-224)||(30561749-30561783)
chr1 (178-224)||(35473978-35474024)
chr1 (190-224)||(37045147-37045181)
chr1 (178-224)||(47528436-47528482)
chr1 (76-121)||(5257012-5257057)
chr1 (179-224)||(6000133-6000178)
chr1 (179-224)||(9639807-9639852)
chr1 (192-224)||(23405361-23405393)
chr1 (192-224)||(24631865-24631897)
chr1 (180-224)||(32394618-32394662)
chr1 (188-224)||(35442881-35442917)
chr1 (192-224)||(50638919-50638951)
[»] chr7 (10 HSPs)
chr7 (37-121)||(8722099-8722183)
chr7 (39-93)||(24060386-24060440)
chr7 (182-224)||(29237550-29237592)
chr7 (178-224)||(47155093-47155139)
chr7 (178-224)||(33473510-33473556)
chr7 (1-79)||(43358733-43358811)
chr7 (178-224)||(46987112-46987158)
chr7 (191-224)||(2648298-2648331)
chr7 (195-224)||(37495924-37495953)
chr7 (180-224)||(6768698-6768742)
[»] chr5 (13 HSPs)
chr5 (4-120)||(41863326-41863441)
chr5 (7-121)||(5856419-5856533)
chr5 (2-52)||(36629667-36629717)
chr5 (187-224)||(31545897-31545934)
chr5 (179-224)||(43108595-43108640)
chr5 (188-220)||(16485962-16485994)
chr5 (190-224)||(5107246-5107280)
chr5 (178-224)||(31708135-31708181)
chr5 (179-220)||(21594376-21594417)
chr5 (179-220)||(21598493-21598534)
chr5 (187-224)||(22538820-22538857)
chr5 (179-224)||(37932356-37932401)
chr5 (1-49)||(40693307-40693355)
[»] chr3 (10 HSPs)
chr3 (21-121)||(34996086-34996186)
chr3 (1-121)||(21594503-21594623)
chr3 (179-224)||(1149059-1149104)
chr3 (178-224)||(13800693-13800739)
chr3 (178-224)||(25902806-25902852)
chr3 (1-106)||(2594435-2594540)
chr3 (190-223)||(8136633-8136666)
chr3 (179-224)||(27397602-27397647)
chr3 (180-224)||(10594703-10594747)
chr3 (34-106)||(36007123-36007195)
[»] chr2 (24 HSPs)
chr2 (1-116)||(11681647-11681762)
chr2 (1-121)||(11090038-11090157)
chr2 (1-89)||(12599494-12599582)
chr2 (1-92)||(11694221-11694312)
chr2 (178-224)||(35685050-35685096)
chr2 (178-224)||(37320506-37320552)
chr2 (179-224)||(5980253-5980298)
chr2 (1-121)||(28416896-28417015)
chr2 (38-121)||(20170621-20170704)
chr2 (178-224)||(24593402-24593448)
chr2 (190-224)||(25598563-25598597)
chr2 (190-224)||(43356543-43356577)
chr2 (195-224)||(4509563-4509592)
chr2 (179-224)||(10065499-10065544)
chr2 (179-224)||(24393271-24393316)
chr2 (179-224)||(32204570-32204615)
chr2 (1-70)||(35468717-35468786)
chr2 (179-224)||(36359340-36359385)
chr2 (192-220)||(13410678-13410706)
chr2 (192-224)||(20239369-20239401)
chr2 (1-53)||(29241768-29241820)
chr2 (1-41)||(29353779-29353819)
chr2 (180-224)||(29470383-29470427)
chr2 (192-224)||(41778947-41778979)
[»] chr6 (5 HSPs)
chr6 (1-103)||(32279622-32279724)
chr6 (56-121)||(28907742-28907807)
chr6 (190-224)||(34474253-34474287)
chr6 (191-224)||(1918460-1918493)
chr6 (180-224)||(30639417-30639461)
[»] chr4 (24 HSPs)
chr4 (1-123)||(20004786-20004904)
chr4 (1-80)||(48458023-48458102)
chr4 (35-121)||(646031-646117)
chr4 (178-224)||(1701635-1701681)
chr4 (178-224)||(12058345-12058391)
chr4 (9-63)||(36703097-36703151)
chr4 (179-224)||(50362129-50362174)
chr4 (1-53)||(26108841-26108892)
chr4 (1-93)||(38490908-38491000)
chr4 (1-81)||(46250896-46250976)
chr4 (190-224)||(19908718-19908752)
chr4 (190-224)||(23775544-23775578)
chr4 (178-224)||(34545960-34546006)
chr4 (178-224)||(34833995-34834041)
chr4 (190-224)||(38453291-38453325)
chr4 (178-220)||(56088062-56088104)
chr4 (179-224)||(11166712-11166757)
chr4 (179-224)||(19854591-19854636)
chr4 (179-224)||(29808258-29808303)
chr4 (180-224)||(9990292-9990336)
chr4 (192-224)||(25978343-25978375)
chr4 (1-53)||(26067259-26067310)
chr4 (179-219)||(28235963-28236003)
chr4 (192-224)||(53190321-53190353)
[»] chr8 (8 HSPs)
chr8 (178-224)||(7718726-7718772)
chr8 (31-93)||(29862564-29862626)
chr8 (179-224)||(23763277-23763322)
chr8 (195-224)||(7553705-7553734)
chr8 (179-224)||(8148417-8148462)
chr8 (179-224)||(35102657-35102702)
chr8 (179-224)||(42208459-42208504)
chr8 (1-121)||(39199170-39199290)
[»] scaffold0238 (1 HSPs)
scaffold0238 (190-224)||(25415-25449)
[»] scaffold0126 (1 HSPs)
scaffold0126 (191-224)||(34890-34923)


Alignment Details
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 30795949 - 30795727
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30795949 tataaaataaatttgtatattttttaatagcatcaacaaaatagcattttaatgatcaaattttcttaaagttataattgataggagaaaaagacagccc 30795850  T
Q  101 aaaacagtctactttctttattaattttcttaaagataaatctgatagtatctcgaaattattcttaannnnnnnnnggtggtgtccaaggttcgaacct 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||||  |||||||||||||    
T  30795849 aaaacagtctactttctttattaattttcttaaagataaatttgatagtatctcgaaatgattcttaa-ttttttttggtggtgtttaaggttcgaacct 30795751  T
Q  201 tggaccttgcatatattatgcatt 224  Q
    ||||||||||||||||||||||||    
T  30795750 tggaccttgcatatattatgcatt 30795727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 10427545 - 10427426
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    |||||||||||||| ||| |||||||||  |||||||||||||||||| ||||| |||||||| |||||  |||||||||  ||||||||||| ||||||    
T  10427545 tataatataaattcttattttttttaatgacatcaacaaaatagcattcttatg-tcaaatttacttaagagtataattggaaggagaaaaaggcagccc 10427447  T
Q  101 aaaacagtctactttctttat 121  Q
    ||||  || ||||||||||||    
T  10427446 aaaatggtatactttctttat 10427426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 10427400 - 10427297
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    |||||||||| ||| ||| ||||| |||  || ||||||||||||||| |||||||||||||| ||||| | ||||||||  ||||||||||| |||| |    
T  10427400 tataatataagttcttatctttttaaatgacaccaacaaaatagcattcttatgatcaaatttccttaaggttataattggaaggagaaaaagccagcac 10427301  T
Q  101 aaaa 104  Q
    ||||    
T  10427300 aaaa 10427297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 17284022 - 17283977
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  17284022 gtggtgtccagggttcgaaccctggaccttgcatatattatgcatt 17283977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 10427296 - 10427224
Alignment:
Q  49 tttatgatcaaattttcttaaaggtataattgataggagaaaaagacagcccaaaacagtctactttctttat 121  Q
    ||||||||||||||| ||||| ||| | ||||  |||||||||||| |||||||||  |||||||||||||||    
T  10427296 tttatgatcaaatttgcttaagggtgtgattggaaggagaaaaagaaagcccaaaatggtctactttctttat 10427224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 12294507 - 12294388
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    |||||||||||||| ||| ||||  |||  || |||||||||| |||| | ||| |||||||| ||||| ||||||| ||  | ||||||||| ||||||    
T  12294507 tataatataaattcttatcttttaaaatgaca-caacaaaataacattctgatggtcaaatttgcttaagggtataaatggaacgagaaaaagtcagccc 12294409  T
Q  101 aaaacagtctactttctttat 121  Q
    |||||  ||||||||||||||    
T  12294408 aaaacgatctactttctttat 12294388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 10132434 - 10132479
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||||||||||||||   ||||||||||||||||||||||    
T  10132434 gtggtgtccaaggttcgaaccccagaccttgcatatattatgcatt 10132479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 35633038 - 35632991
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatt 48  Q
    |||||||||||||| |||||||||||||| || |||||||||| ||||    
T  35633038 tataatataaattcttatattttttaataacaccaacaaaataacatt 35632991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 5907871 - 5907825
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||  |||| ||||| ||||||||||||||||||||||||    
T  5907871 ggtggtgtccggggtttgaaccctggaccttgcatatattatgcatt 5907825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 12783690 - 12783736
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||| || ||||||||||||| ||||| ||||||||||||||||    
T  12783690 ggtggtggccgaggttcgaaccttagacctcgcatatattatgcatt 12783736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 13615613 - 13615647
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||||||||||||||| |||||||||||    
T  13615613 ggttcgaaccttggaccttgcatgtattatgcatt 13615647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 17221521 - 17221555
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||| |||||||||||||||||||||||    
T  17221521 ggttcgaacctcggaccttgcatatattatgcatt 17221555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 30561783 - 30561749
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||||| ||||||||||||||||||||||    
T  30561783 ggttcgaaccttagaccttgcatatattatgcatt 30561749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 35474024 - 35473978
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||  |||||||||| || |||||||||||||||||||||    
T  35474024 ggtggtgtccggggttcgaaccctgaaccttgcatatattatgcatt 35473978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 37045147 - 37045181
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| ||||||||||||||||||||||||    
T  37045147 ggttcgaaccctggaccttgcatatattatgcatt 37045181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 47528436 - 47528482
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||  ||||||||||| ||||||||| |||||||||||||    
T  47528436 ggtggtgtccggggttcgaacctcggaccttgcgtatattatgcatt 47528482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 5257057 - 5257012
Alignment:
Q  76 aattgataggagaaaaagacagcccaaaacagtctactttctttat 121  Q
    |||||| ||||||||||| ||||||||||| ||||| |||||||||    
T  5257057 aattgaaaggagaaaaagccagcccaaaacggtctattttctttat 5257012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 6000133 - 6000178
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||  |||| |||||| |||||||||||||||||||||||    
T  6000133 gtggtgtccggggtttgaacctcggaccttgcatatattatgcatt 6000178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 9639807 - 9639852
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||    
T  9639807 gtggtgtccgaggttcgaactccggaccttgcatatattatgcatt 9639852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 23405361 - 23405393
Alignment:
Q  192 ttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||| ||||||||||||||||||||||||    
T  23405361 ttcgaaccctggaccttgcatatattatgcatt 23405393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 24631897 - 24631865
Alignment:
Q  192 ttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||||| |||||||||||||||||||    
T  24631897 ttcgaaccttggatcttgcatatattatgcatt 24631865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 32394618 - 32394662
Alignment:
Q  180 tggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||| |||| |||||||||||||| ||||||||||| ||||||    
T  32394618 tggtgtgcaagattcgaaccttggactttgcatatattttgcatt 32394662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 35442917 - 35442881
Alignment:
Q  188 aaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  35442917 aaggttcgaacctcggaccttgaatatattatgcatt 35442881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 50638919 - 50638951
Alignment:
Q  192 ttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||| ||||||||||||||||||||||||    
T  50638919 ttcgaaccctggaccttgcatatattatgcatt 50638951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 8722099 - 8722183
Alignment:
Q  37 caaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagcccaaaacagtctactttctttat 121  Q
    ||||||| ||||||||||||||||||| |||||  |||||||||  ||||||||| |||| ||||||||| ||||||||||||||    
T  8722099 caaaataacatttttatgatcaaatttgcttaagcgtataattggaaggagaaaaggacaacccaaaacaatctactttctttat 8722183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 24060440 - 24060386
Alignment:
Q  39 aaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaag 93  Q
    |||||||||| |||| ||||||||| ||||||||||||||||| | |||||||||    
T  24060440 aaatagcattcttataatcaaatttgcttaaaggtataattgaaatgagaaaaag 24060386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 29237550 - 29237592
Alignment:
Q  182 gtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  29237550 gtgtccgaggttcgaaccctggaccttgcatatattatgcatt 29237592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 47155093 - 47155139
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||    
T  47155093 ggtggtgtccggggttcgaaccctggaccttgcatatattatgcatt 47155139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 33473510 - 33473556
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||| ||| |||| ||||| ||||||||||||||||||||||||    
T  33473510 ggtggtggccagggttggaaccctggaccttgcatatattatgcatt 33473556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43358811 - 43358733
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataatt 79  Q
    |||||||||||||| ||| ||||| |||  || |||||||||| |||||||||  ||||||||  ||||| ||||||||    
T  43358811 tataatataaattcttatctttttaaattacaccaacaaaataacatttttatagtcaaatttatttaaaagtataatt 43358733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 46987158 - 46987112
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||  ||||||||||  |||||||||||||||||||||||    
T  46987158 ggtggtgtccggggttcgaaccccggaccttgcatatattatgcatt 46987112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 2648331 - 2648298
Alignment:
Q  191 gttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||| ||||||||||||||||||||||||    
T  2648331 gttcgaaccctggaccttgcatatattatgcatt 2648298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 37495924 - 37495953
Alignment:
Q  195 gaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||||||||||||||||||||||    
T  37495924 gaaccttggaccttgcatatattatgcatt 37495953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 6768698 - 6768742
Alignment:
Q  180 tggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||| || |||||||||  ||||||||||||||||||||||    
T  6768698 tggtgtccgagattcgaacctcagaccttgcatatattatgcatt 6768742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 3e-19; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 41863326 - 41863441
Alignment:
Q  4 aatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagcccaaa 103  Q
    ||||||||||| ||| |||||||||  || ||||||||||||||| ||| | |||||||| ||||| ||||||||||  |||||||||| | ||||||||    
T  41863326 aatataaattcttatcttttttaatgacaccaacaaaatagcattcttacggtcaaatttgcttaagggtataattggaaggagaaaaa-aaagcccaaa 41863424  T
Q  104 acagtctactttcttta 120  Q
    ||| | |||||||||||    
T  41863425 acaatatactttcttta 41863441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 5856419 - 5856533
Alignment:
Q  7 ataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagcccaaaaca 106  Q
    |||||||| ||| ||||| |||  || ||||||||||||||| ||||| |||||||| || || ||||||||||  |||| | | || ||||| ||||      
T  5856419 ataaattcttatctttttaaatgacaccaacaaaatagcattcttatggtcaaatttgctcaagggtataattggaaggatatatagtcagccaaaaaac 5856518  T
Q  107 gtctactttctttat 121  Q
    |||||||||||||||    
T  5856519 gtctactttctttat 5856533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 36629717 - 36629667
Alignment:
Q  2 ataatataaattcatatattttttaatagcatcaacaaaatagcattttta 52  Q
    ||||||||||||| ||||||||||||||  |||||||| ||||||||||||    
T  36629717 ataatataaattcttatattttttaataatatcaacaacatagcattttta 36629667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 31545934 - 31545897
Alignment:
Q  187 caaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||||||||| |||||||||||||||||||||    
T  31545934 caaggttcgaaccttgaaccttgcatatattatgcatt 31545897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 43108640 - 43108595
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||||| |||||||| || |||||||||||||||||||||    
T  43108640 gtggtgtccaagattcgaaccctgaaccttgcatatattatgcatt 43108595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 16485962 - 16485994
Alignment:
Q  188 aaggttcgaaccttggaccttgcatatattatg 220  Q
    |||||||||||||||||||||||||||||||||    
T  16485962 aaggttcgaaccttggaccttgcatatattatg 16485994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 5107246 - 5107280
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||| |||||||||||||||||||||||    
T  5107246 ggttcgaacctcggaccttgcatatattatgcatt 5107280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 31708135 - 31708181
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| |||||||||||   ||||||||||||||||||||||    
T  31708135 ggtggtgtccgaggttcgaaccccagaccttgcatatattatgcatt 31708181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 21594376 - 21594417
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatg 220  Q
    |||||| ||||| || ||||||||||||||||||||||||||    
T  21594376 gtggtggccaagctttgaaccttggaccttgcatatattatg 21594417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 21598493 - 21598534
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatg 220  Q
    |||||| ||||| || ||||||||||||||||||||||||||    
T  21598493 gtggtggccaagctttgaaccttggaccttgcatatattatg 21598534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 22538820 - 22538857
Alignment:
Q  187 caaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  22538820 caaggtttgaaccttggaccttgcatattttatgcatt 22538857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 37932401 - 37932356
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||| ||| ||||||||||  |||||||||||||||||||||||    
T  37932401 gtggtggccagggttcgaaccccggaccttgcatatattatgcatt 37932356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40693307 - 40693355
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcattt 49  Q
    |||||||||||||| |||||||||||||| || ||||| |||| |||||    
T  40693307 tataatataaattcttatattttttaataacaccaacataataacattt 40693355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 34996086 - 34996186
Alignment:
Q  21 tttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagcccaaaacagtctactttcttta 120  Q
    ||||||||  || ||||||||||||||| ||||| | |||||| ||||| ||||||||||  ||||||||||  ||||||||||| ||||||||||||||    
T  34996086 tttttaatgacaccaacaaaatagcattcttatggttaaatttgcttaagggtataattggaaggagaaaaaaccagcccaaaacggtctactttcttta 34996185  T
Q  121 t 121  Q
    |    
T  34996186 t 34996186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 21594503 - 21594623
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    ||||||||||||||  || ||||| | |  || ||||||||||  ||||||||| ||| |||| || || ||||||||||  ||||||||||| || | |    
T  21594503 tataatataaattctcatctttttgagtgacaccaacaaaataatatttttatggtcatatttgctaaatggtataattggaaggagaaaaaggcaacac 21594602  T
Q  101 aaaacagtctactttctttat 121  Q
    |||||| ||||||||||||||    
T  21594603 aaaacaatctactttctttat 21594623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 1149059 - 1149104
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||    
T  1149059 gtggtgtccagggttcgaaccctagaccttgcatatattatgcatt 1149104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 13800739 - 13800693
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||  |||||||||  ||||||||||||||||||||||||    
T  13800739 ggtggtgtccggggttcgaactgtggaccttgcatatattatgcatt 13800693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 25902852 - 25902806
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||    
T  25902852 ggtggtgtccaaggttcgaaccccagaccttgcatatattatacatt 25902806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2594540 - 2594435
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    |||||||||||||| ||| ||||| |||  || || ||||||| |||| ||||| ||||||||  |||| ||| |||||   ||||||||||  ||||||    
T  2594540 tataatataaattcttatctttttgaatgacaccagcaaaataacattgttatggtcaaatttgattaagggtgtaatttgaaggagaaaaaaccagccc 2594441  T
Q  101 aaaaca 106  Q
    ||||||    
T  2594440 aaaaca 2594435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 8136633 - 8136666
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcat 223  Q
    |||| |||||||||||||||||||||||||||||    
T  8136633 ggtttgaaccttggaccttgcatatattatgcat 8136666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 27397602 - 27397647
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||  |||||||||||| ||||||||||||||||| ||||    
T  27397602 gtggtgtccggggttcgaaccttagaccttgcatatattatacatt 27397647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 10594747 - 10594703
Alignment:
Q  180 tggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||||||| ||||| |  |||||||||||||||||||||    
T  10594747 tggtgtccaaggtttgaaccctaaaccttgcatatattatgcatt 10594703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 36007123 - 36007195
Alignment:
Q  34 caacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagcccaaaaca 106  Q
    |||||||||| |||| |||| ||||||||| |||||   || |||||| |||||||||||  |||||||||||    
T  36007123 caacaaaataacattcttataatcaaatttacttaagaatacaattgaaaggagaaaaagtaagcccaaaaca 36007195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11681647 - 11681762
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    |||||||||||||  ||||||||| |||  || |||  |||||||||| ||||| |||||||| ||||   |||||||||| ||||||||||| ||||||    
T  11681647 tataatataaatttttatatttttgaatgacaccaatcaaatagcattcttatggtcaaatttgcttaggagtataattgaaaggagaaaaagtcagccc 11681746  T
Q  101 aaaacagtctactttc 116  Q
    |||||| |||||||||    
T  11681747 aaaacaatctactttc 11681762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 11090157 - 11090038
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    |||||||||||||| ||| ||||| |||   | |||||||| |||||| |||||||||| ||| ||||| ||||||||||| | ||||||||  |||||     
T  11090157 tataatataaattcttatctttttgaatgaaaccaacaaaacagcattgttatgatcaa-tttgcttaagggtataattgaaatgagaaaaaatcagccg 11090059  T
Q  101 aaaacagtctactttctttat 121  Q
    |||||| |||| |||||||||    
T  11090058 aaaacaatctattttctttat 11090038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12599582 - 12599494
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaa 89  Q
    |||||||||||||| ||| ||| |||||  |||||||||||||  ||||||||  |||||||| ||||||||||||||| | |||||||    
T  12599582 tataatataaattcttatctttcttaatgacatcaacaaaataatatttttatcgtcaaatttacttaaaggtataattaaaaggagaa 12599494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11694221 - 11694312
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaa 92  Q
    |||||||||||||  ||||||||| |||  || ||||||||||||||| ||||| |||||||| ||||   |||||||||| ||||||||||    
T  11694221 tataatataaatttttatatttttgaatgacaccaacaaaatagcattcttatggtcaaatttgcttaggagtataattgaaaggagaaaaa 11694312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 35685050 - 35685096
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||    
T  35685050 ggtggtgtccaaagttcgaaccctagaccttgcatatattatgcatt 35685096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 37320506 - 37320552
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||    
T  37320506 ggtggtgtccatggttcgaacctcgaaccttgcatatattatgcatt 37320552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 5980298 - 5980253
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||    
T  5980298 gtggtgtccaatgttcgaactttagaccttgcatatattatgcatt 5980253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28417015 - 28416896
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    |||||||||||||| ||| ||||| |||  || ||||||||||  | |||||||||||||||| |||||  || ||| |   || |||||||||| | ||    
T  28417015 tataatataaattcttatctttttgaatgacaccaacaaaatattagttttatgatcaaatttgcttaagagt-taactagaagaagaaaaagacggtcc 28416917  T
Q  101 aaaacagtctactttctttat 121  Q
    ||||||||||||| |||||||    
T  28416916 aaaacagtctactatctttat 28416896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 20170621 - 20170704
Alignment:
Q  38 aaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagcccaaaacagtctactttctttat 121  Q
    ||||||||||||||||  ||||||||  |||| |||||| |||| |  |||||||  || |||||||||||||| |||||||||    
T  20170621 aaaatagcatttttatagtcaaatttgtttaagggtatatttgaaaaaagaaaaaatcaccccaaaacagtctattttctttat 20170704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 24593448 - 24593402
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||| || ||||||||||  |||||||||||||||||||||||    
T  24593448 ggtggtgttcagggttcgaaccccggaccttgcatatattatgcatt 24593402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 25598563 - 25598597
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| ||||||||||||||||||||||||    
T  25598563 ggttcgaaccctggaccttgcatatattatgcatt 25598597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 43356543 - 43356577
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||| |||||||||||||||||||||||    
T  43356543 ggttcgaacctcggaccttgcatatattatgcatt 43356577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 4509592 - 4509563
Alignment:
Q  195 gaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||||||||||||||||||||||    
T  4509592 gaaccttggaccttgcatatattatgcatt 4509563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 10065544 - 10065499
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| |||||||||| || | |||||||||||||||||||    
T  10065544 gtggtgtccagggttcgaaccctgaaacttgcatatattatgcatt 10065499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 24393316 - 24393271
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||  |||||||||||  ||||||||||||||||||||||    
T  24393316 gtggtgtccggggttcgaacctcagaccttgcatatattatgcatt 24393271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 32204615 - 32204570
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||| || ||||||||| |||||| |||||||||||||||||||    
T  32204615 gtggtggccgaggttcgaatcttggatcttgcatatattatgcatt 32204570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35468786 - 35468717
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaa 70  Q
    |||||||||||||| ||||||||||| |  || |||||||||| |||| ||||  |||||||| ||||||    
T  35468786 tataatataaattcttatattttttattgacaccaacaaaataacattcttatagtcaaatttgcttaaa 35468717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 36359385 - 36359340
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||| |||||||| |||||  |||||||||||||||||||||||    
T  36359385 gtggtggccaaggtttgaaccccggaccttgcatatattatgcatt 36359340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 13410706 - 13410678
Alignment:
Q  192 ttcgaaccttggaccttgcatatattatg 220  Q
    |||||||||||||||||||||||||||||    
T  13410706 ttcgaaccttggaccttgcatatattatg 13410678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 20239401 - 20239369
Alignment:
Q  192 ttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| ||||||||||||||||||||||    
T  20239401 ttcgaaccttagaccttgcatatattatgcatt 20239369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29241820 - 29241768
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttat 53  Q
    |||| ||||||||||||| |||||||||| ||  |||||||||||||| ||||    
T  29241820 tatactataaattcatatcttttttaataacactaacaaaatagcattcttat 29241768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29353779 - 29353819
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaa 41  Q
    |||||||||||||| | |||||||||||| |||||||||||    
T  29353779 tataatataaattcttgtattttttaataacatcaacaaaa 29353819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 29470383 - 29470427
Alignment:
Q  180 tggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  29470383 tggtgttcaaagttcgaaccttggcccttgcatatattttgcatt 29470427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 41778947 - 41778979
Alignment:
Q  192 ttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||| |||||||||||||||||||||||    
T  41778947 ttcgaacctcggaccttgcatatattatgcatt 41778979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32279622 - 32279724
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    |||||||||||||| ||| |||||||||  || |||||||||| |||||||||| |||||||| ||||| | |||||||   ||||||||||| |||| |    
T  32279622 tataatataaattcttatcttttttaatgacaccaacaaaataacatttttatggtcaaatttgcttaaggatataattagaaggagaaaaagtcagctc 32279721  T
Q  101 aaa 103  Q
    |||    
T  32279722 aaa 32279724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 28907807 - 28907742
Alignment:
Q  56 tcaaattttcttaaaggtataattgataggagaaaaagacagcccaaaacagtctactttctttat 121  Q
    |||||||| ||||| ||||||||||  | ||||||| | |||||||||||||||||||||||||||    
T  28907807 tcaaatttgcttaagggtataattggaatgagaaaatgtcagcccaaaacagtctactttctttat 28907742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 34474287 - 34474253
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| ||||||||||||||||||||||||    
T  34474287 ggttcgaaccatggaccttgcatatattatgcatt 34474253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 1918460 - 1918493
Alignment:
Q  191 gttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| |||||||||||||||||||||||    
T  1918460 gttcgaacctcggaccttgcatatattatgcatt 1918493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 30639417 - 30639461
Alignment:
Q  180 tggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||| || |||||||||  ||||||||||||||||||||||    
T  30639417 tggtgtccgagattcgaacctcagaccttgcatatattatgcatt 30639461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 20004786 - 20004904
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaaga-cagcc 99  Q
    |||||||||||||| |||||||||||||  || |||||||||||||||||     | |||||| || || ||||||| ||  |||||||||| | || ||    
T  20004786 tataatataaattcttatattttttaatgacaccaacaaaatagcatttt-----ttaaatttgctcaatggtataaatggaaggagaaaaaaatcaacc 20004880  T
Q  100 caaaacagtctactttctttatta 123  Q
    ||||||| || |||||||||||||    
T  20004881 caaaacaatccactttctttatta 20004904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48458102 - 48458023
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattg 80  Q
    ||||||||||| || ||| |||||||||| ||  |||||||||||||| ||||  |||| |||| |||||||||||||||    
T  48458102 tataatataaagtcttatcttttttaataacacaaacaaaatagcattcttatagtcaagtttttttaaaggtataattg 48458023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 646031 - 646117
Alignment:
Q  35 aacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagcccaaaacagtctactttctttat 121  Q
    |||||||||  ||||||||||| ||||||  |||| ||| |||||   |||||||||||||| | ||||| ||||||||||||||||    
T  646031 aacaaaataatatttttatgatgaaatttgtttaagggtgtaattagaaggagaaaaagacaactcaaaagagtctactttctttat 646117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 1701681 - 1701635
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||    
T  1701681 ggtggtgtctgaggttcgaacctcggaccttgcatatattatgcatt 1701635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 12058391 - 12058345
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||    
T  12058391 ggtgatgtccagggttcgaaccttgaaccttgcatatattatgcatt 12058345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 36703151 - 36703097
Alignment:
Q  9 aaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattt 63  Q
    |||||| |||||||||||||  || |||||||||| |||||||||||||||||||    
T  36703151 aaattcttatattttttaatgacaacaacaaaataacatttttatgatcaaattt 36703097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 50362129 - 50362174
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||||    
T  50362129 gtggtggccaaggtttgaaccctggaccttgcatatattatgcatt 50362174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26108892 - 26108841
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttat 53  Q
    |||||||||||||| |||||||||||||  ||||||| |||||||||||||||    
T  26108892 tataatataaattcttatattttttaatgacatcaac-aaatagcatttttat 26108841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38490908 - 38491000
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaag 93  Q
    ||||||| |||||| ||| |||||||||| ||| || |||| | || |||||| |||||||||  |||||||||||||||  | |||||||||    
T  38490908 tataatacaaattcttatcttttttaataacattaataaaacaacagttttataatcaaatttgtttaaaggtataattggaaagagaaaaag 38491000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46250896 - 46250976
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattga 81  Q
    |||||||||||||| | | | ||| |||  ||||||||||||| |||| ||||||||||||||  |||| |||||||||||    
T  46250896 tataatataaattcttttctctttgaattacatcaacaaaataacattcttatgatcaaatttgtttaagggtataattga 46250976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 19908752 - 19908718
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||| |||||||||||||||||||||||    
T  19908752 ggttcgaacctcggaccttgcatatattatgcatt 19908718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 23775578 - 23775544
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| ||||||||||||||||||||||||    
T  23775578 ggttcgaaccctggaccttgcatatattatgcatt 23775544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 34546006 - 34545960
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||| ||||||| |  ||||||||||||||||||||||||    
T  34546006 ggtggtgtccagggttcgatctctggaccttgcatatattatgcatt 34545960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 34833995 - 34834041
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||||  |||||||||  |||||||||||||||||||||||    
T  34833995 ggtggtgtccagtgttcgaaccccggaccttgcatatattatgcatt 34834041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 38453325 - 38453291
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| ||||||||||||||||||||||||    
T  38453325 ggttcgaaccctggaccttgcatatattatgcatt 38453291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 56088062 - 56088104
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatg 220  Q
    ||||||||||| |||||||||| |||| |||||||||||||||    
T  56088062 ggtggtgtccacggttcgaaccgtggatcttgcatatattatg 56088104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 11166757 - 11166712
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||  |||||||||||| ||||||||||||||||| ||||    
T  11166757 gtggtgtccggggttcgaaccttagaccttgcatatattatacatt 11166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 19854636 - 19854591
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||| |||||||||||  ||| |||||||||||||||||||    
T  19854636 gtggtgtccgaggttcgaaccccggatcttgcatatattatgcatt 19854591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 29808258 - 29808303
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||||||||||||||    |||||||||||||||||||||    
T  29808258 gtggtgtccaaggttcgaaccccataccttgcatatattatgcatt 29808303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 9990336 - 9990292
Alignment:
Q  180 tggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||| ||||||||||||  || |||||||||||||||||||    
T  9990336 tggtgtccgaggttcgaacctcagatcttgcatatattatgcatt 9990292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 25978375 - 25978343
Alignment:
Q  192 ttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||| |||||||||||||||||||||||    
T  25978375 ttcgaacctcggaccttgcatatattatgcatt 25978343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26067310 - 26067259
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttat 53  Q
    ||||||||||||||||||||||| ||||  ||||||| |||||||||| ||||    
T  26067310 tataatataaattcatatattttgtaatgacatcaac-aaatagcattcttat 26067259  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 28235963 - 28236003
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattat 219  Q
    ||||||||||||||||||||  ||||| |||||||||||||    
T  28235963 gtggtgtccaaggttcgaactgtggactttgcatatattat 28236003  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 53190353 - 53190321
Alignment:
Q  192 ttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||| ||||||||||||||||||||||||    
T  53190353 ttcgaaccctggaccttgcatatattatgcatt 53190321  T

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Target: chr8 (Bit Score: 35; Significance: 0.00000000008; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 7718772 - 7718726
Alignment:
Q  178 ggtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||    
T  7718772 ggtggtgttcgaagttcgaaccttggaccttgcatatattatgcatt 7718726  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 29862626 - 29862564
Alignment:
Q  31 catcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaag 93  Q
    ||||||||||||| |||||||||  |||||||| ||||| ||||||||||| ||||| |||||    
T  29862626 catcaacaaaatatcatttttatagtcaaatttgcttaagggtataattgaaaggaggaaaag 29862564  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 23763277 - 23763322
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||| ||||||| |||| ||||||||||||||||||||||||    
T  23763277 gtggtgtcaaaggttcaaaccctggaccttgcatatattatgcatt 23763322  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 7553734 - 7553705
Alignment:
Q  195 gaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||||||||||||||||||||||||    
T  7553734 gaaccttggaccttgcatatattatgcatt 7553705  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 8148417 - 8148462
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||| ||||||||| ||| ||||||||||||||||| ||||    
T  8148417 gtggtgtccgaggttcgaatcttagaccttgcatatattatacatt 8148462  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 35102657 - 35102702
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||| || |||||||||||| ||| |||||||||||||||||||    
T  35102657 gtggtgcccgaggttcgaacctcggatcttgcatatattatgcatt 35102702  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 42208459 - 42208504
Alignment:
Q  179 gtggtgtccaaggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||| |||| ||||| |||||| |||||||||||||||||||||||    
T  42208459 gtggggtccgaggtttgaacctcggaccttgcatatattatgcatt 42208504  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 39199290 - 39199170
Alignment:
Q  1 tataatataaattcatatattttttaatagcatcaacaaaatagcatttttatgatcaaattttcttaaaggtataattgataggagaaaaagacagccc 100  Q
    |||||||||||||  ||| ||||| |||| ||  ||||||||| ||||  |||  ||||||||  |||| ||||||||| | ||||||||||  |||| |    
T  39199290 tataatataaattattatctttttgaatatcactaacaaaataacattcatattgtcaaatttgtttaagggtataattaaaaggagaaaaaaccagctc 39199191  T
Q  101 aaaacagtctactttctttat 121  Q
    |||| ||| || |||||||||    
T  39199190 aaaatagtgtaatttctttat 39199170  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 25449 - 25415
Alignment:
Q  190 ggttcgaaccttggaccttgcatatattatgcatt 224  Q
    |||||||||| ||||||||||||||||||||||||    
T  25449 ggttcgaaccctggaccttgcatatattatgcatt 25415  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 34890 - 34923
Alignment:
Q  191 gttcgaaccttggaccttgcatatattatgcatt 224  Q
    ||||||||| ||||||||||||||||||||||||    
T  34890 gttcgaaccctggaccttgcatatattatgcatt 34923  T

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