View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14693_low_8 (Length: 296)
Name: NF14693_low_8
Description: NF14693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14693_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 26026326 - 26026036
Alignment:
| Q |
1 |
ctcattcatattattgacaagagtcaggtcctactgataataaatttttctttcctgaaagaagttattatcccgttgtcgacatcgttgaccatcattt |
100 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |
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| T |
26026326 |
ctcattcttattattgacaagagtcaggtcctactgataataaatttttctttcatgaaagaagttattattccgttgtcaacatcgttgaccatcattt |
26026227 |
T |
|
| Q |
101 |
ttagtgaactctttaatctgttggatcaactaaataagattggaaacttgggtctaacctctaacttctagattgcttgacatatcttaaggtttaaact |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26026226 |
ttagtgaactctttaatctgttgggtcaactaaataagattggaaacttcggtctaacctctaacttctagattgcttgacatatcttaaggtttaaact |
26026127 |
T |
|
| Q |
201 |
cttcactggatattcacttgttttgtcagtgtcatattcttgtaggatttttagtcaattttggttcattggaagtctcaagcttgtatat |
291 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |
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| T |
26026126 |
cttcactggatattcacttgttttgtcagtgtcaaattcttgtaggatttttagacaattttggttcattggaaatctcaagcttgtatat |
26026036 |
T |
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