View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14694_high_2 (Length: 451)
Name: NF14694_high_2
Description: NF14694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14694_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 15 - 420
Target Start/End: Original strand, 7810977 - 7811388
Alignment:
| Q |
15 |
atgcaacttgcagttccattatttgatggcttctatgatcatttgggaaagttactggaaatcttgcttcactacaaggaatatttgagtttgattgaga |
114 |
Q |
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| T |
7810977 |
atgcaacttgcagttccattatttgatggcttctatgatcatttggaaaagttactggagatcttgcttcactacaaggaatatttgagtttgattgaga |
7811076 |
T |
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| Q |
115 |
aaggtgttgtcaaggcgtcatcggagcaactcaagaacaacaaaagttag-----tagatgagagcaagttgaaggatttgaggccaagaattatcgttt |
209 |
Q |
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| T |
7811077 |
aaggtgttgtcaaggcgtcatcggagcaactcaagaacaacaaaagttaggagatgagatgagagcaagttgaaggatttgaggccaaaaattattgttt |
7811176 |
T |
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| Q |
210 |
tcaagagaatgataaatcaaccttggagctgcc-aaagacatttgagattatatgcccaataaatattaaggctccaccaaggtcaaacgagcatagttg |
308 |
Q |
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| T |
7811177 |
tcaagagaatgataaatcaaccttggagctgccaaaagacatttgagattatatgcccaataaatattaaggctccaccaaggtcaaacgagcatagttg |
7811276 |
T |
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| Q |
309 |
catgcctcgagtacttcatttcataaattttggaaaaacaatgttggttttctcctaactaacttgctttcgagacaaacgaccaaattgatccataata |
408 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7811277 |
catgtctcgagtacttcatttcataaattttggaaaaacaatgttggttttctcctgactaacttgctttcgagacaaacgaccaaattgatccataata |
7811376 |
T |
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| Q |
409 |
gcagtaacacaa |
420 |
Q |
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| T |
7811377 |
gcagtaacacaa |
7811388 |
T |
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