View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14694_low_11 (Length: 332)
Name: NF14694_low_11
Description: NF14694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14694_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 14252400 - 14252087
Alignment:
| Q |
1 |
actgcattgagttatattagagtttctaaaatatccaagatagtttcacttgaacagaattggaactttaggtagaaatgttattttgaataagttgtta |
100 |
Q |
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| T |
14252400 |
actgcattgagttatattagagtttctaaaatatccaagatagtttcacttgaacagaattggaactttaggtagaaatgttattttgaataagttgtta |
14252301 |
T |
|
| Q |
101 |
caaggatgataactttgaaattacttgtgaacattttaatgttattttgtcttgtattttatattatatatgctttaagtgtacattctttaattgtgtc |
200 |
Q |
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|| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14252300 |
catggatgataacttcgaaattacttgtgaacattttaatgttattttgtcttgtattttatattatatatgctttaagtgtacattctttaattgtgtc |
14252201 |
T |
|
| Q |
201 |
ttgtagatttccgttgatgccatcgactgctgacttgcaatccatctcgatagtaatccgttggacacctagttcttgcaaccaaataatagtctccaaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
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| T |
14252200 |
ttgtagatttccgttgatgccatcgactgctgacttgcaatccatctcgatagtaatccgttggacacctagctcttgcaaccaaataatagcctccaaa |
14252101 |
T |
|
| Q |
301 |
agaccatacatctc |
314 |
Q |
| |
|
|||||||||||||| |
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| T |
14252100 |
agaccatacatctc |
14252087 |
T |
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