View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14694_low_8 (Length: 362)
Name: NF14694_low_8
Description: NF14694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14694_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 3 - 345
Target Start/End: Complemental strand, 7810979 - 7810621
Alignment:
| Q |
3 |
catgattcctccattgtttcatgaaaaagattgagaaagaacaatctttgagattgcatgtgtaacaaacttgtaaactgaaaacttatataagttattt |
102 |
Q |
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| T |
7810979 |
catgattcctccattgtttcatgaaaaagattgagaaagaacaatctttgagattgcatgtgtaacaaacttgcaaactgaaaacttatataagttattt |
7810880 |
T |
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| Q |
103 |
tggttctctaggttgaatcctcaaccagactctaataccaattgttaaaatcaaacttgatttcactcatcttattaaccatataatgcctttaaatatt |
202 |
Q |
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| T |
7810879 |
tggttctctaggttgaatcctcaaccagactctaataccaattgttaaaatcaaacttgatttcactcatcttattaaccatataatgcctttaaatatt |
7810780 |
T |
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| Q |
203 |
gtccacaatacaacaaaataca----------------actatggagtttaactagttactttacttgtttcgcaagtaactatatatcttaatgaacta |
286 |
Q |
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| T |
7810779 |
gtccacaatacaacaaaatacaactacaacaaaatacaactatggagtttaactagttactttacttgtttcgcaagtaactatatatcttaatgaacta |
7810680 |
T |
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| Q |
287 |
attaaattaagtcataagctagattactatattacggttaacgtattatgcatacctat |
345 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
7810679 |
attaaattaagtcataagctagattactatatgacggttaacgtattatgcatacctat |
7810621 |
T |
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