View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14695_high_23 (Length: 309)
Name: NF14695_high_23
Description: NF14695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14695_high_23 |
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Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 42003044 - 42003350
Alignment:
| Q |
1 |
ttgttgtgaaacgcatctcctttgttgatcaagtagtttgggtcaacgatcccaacatgtgcttcccaaaacgtttcatgtttgaccaaaacaacttcat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
42003044 |
ttgttgtgaaacgcatctcctttgttgatcaagtagtttgggtcaacgatcccaacatttgcttcccaaaacgtttcatgtttgaccaaaacaacttcat |
42003143 |
T |
|
| Q |
101 |
gttaaaccttaaagattcaccgtttcggttaagtgattattacacttttgttaatttttcattcctaaattgtccttccaattcaaccgtaataaattta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42003144 |
gttaaaccttaaagattcaccgtttcggttaagtgattattacacttttgttaatttttcattcctaaattgtccttccaattcaaccgtaataaattta |
42003243 |
T |
|
| Q |
201 |
gtaccacctataagttgtttgaatttaagctctattagtagtatcaacaacgataagaacatgaattattcgattgtggctatgatgtctgatcctccct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
42003244 |
gtaccacctataagttgtttgaatttaagctctattagtagtatcaacaacgataagaacatgaattattcgattgtggctatgatgtctgatcctcctt |
42003343 |
T |
|
| Q |
301 |
ttgctac |
307 |
Q |
| |
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||||||| |
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| T |
42003344 |
ttgctac |
42003350 |
T |
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