View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14695_high_3 (Length: 609)
Name: NF14695_high_3
Description: NF14695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14695_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 532; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 18 - 597
Target Start/End: Original strand, 40006105 - 40006685
Alignment:
| Q |
18 |
ccaagtacctctccacaacaggagccaagcttctccatagtatcacaactacactggtaagttaaacaaagcctaaatcattgcattcaagttcaacatt |
117 |
Q |
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| T |
40006105 |
ccaagtacctctccacaacaggagccaagcttctccatagtatcacaactacactggtaacttaaacaaagcctaaatcattgcattcaagttcaacatt |
40006204 |
T |
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| Q |
118 |
gaagtagcttcagtattaaatttcctagcagttgcaaataaactaataaattatgnnnnnnn-aaacaaacaggatggcatgcattgggagagacctcaa |
216 |
Q |
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| T |
40006205 |
gaagtagcttcagtattaaatttcctagcagttgcaaataaactaataaattatgttttttttaaacaaacaggatggcatgcattgggagagacctcag |
40006304 |
T |
|
| Q |
217 |
acactaatttccaactcttgttgcattgacccggaagagaaactgcaagatttggaaataccaataagagggatggacattgctctatcgagcggcatgt |
316 |
Q |
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| T |
40006305 |
acactaatttccaactcttgttgcattgacccggaagagaaactgcaagatttggaaataccaataagagggatggacattgctctatcgagcggcatgt |
40006404 |
T |
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| Q |
317 |
cttttcctgttggtgttattgatgaggagctaagaggtgttcttctcaattgcagagaacaaatcagccaaaaattagaccagcaagcgaaatgctttgt |
416 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40006405 |
cttttcctgttggtgttattgatgaggagctaagaggtgttctgctcaattgcagagaacaaatcagccaaaaattagaccagcaagcgaaatgctttgt |
40006504 |
T |
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| Q |
417 |
tccttttgatacaaccacaactcaagaaatgaaacaagacattttcaacaaaaacacatccatagcctacaaaaatctcccaacatcattctttttatac |
516 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
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| T |
40006505 |
tccttttgatacaaccacaactcaagaaatgaaacaagacattttcaacaaaaacccttccatagcctacaaaaatctcccaacatcattctttttatac |
40006604 |
T |
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| Q |
517 |
tgtgtgcaactactccgagatgacttgtctatttcaaagaaaactgaccatgtgcagaaaaaagctcagaaaaatgatgat |
597 |
Q |
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| T |
40006605 |
tgtgtgcaactactccgagatgacttgtctatttcaaagaaaactgaccatgtgcagaaaaaagctcagaaaaatgatgat |
40006685 |
T |
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