View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14695_high_4 (Length: 539)

Name: NF14695_high_4
Description: NF14695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14695_high_4
NF14695_high_4
[»] chr6 (16 HSPs)
chr6 (19-340)||(1039227-1039548)
chr6 (343-526)||(28996714-28996897)
chr6 (359-526)||(18339106-18339273)
chr6 (343-526)||(29743267-29743450)
chr6 (359-523)||(34948761-34948925)
chr6 (359-523)||(13837821-13837985)
chr6 (343-526)||(398601-398784)
chr6 (375-526)||(33229336-33229487)
chr6 (198-296)||(1037408-1037504)
chr6 (339-444)||(24697899-24698004)
chr6 (345-455)||(31028435-31028545)
chr6 (343-395)||(13647001-13647053)
chr6 (343-395)||(34385519-34385571)
chr6 (345-396)||(2753336-2753387)
chr6 (338-396)||(21149331-21149389)
chr6 (342-444)||(24695471-24695572)
[»] chr3 (23 HSPs)
chr3 (343-526)||(45182965-45183148)
chr3 (343-526)||(11018212-11018395)
chr3 (343-526)||(6930894-6931077)
chr3 (343-526)||(33040937-33041120)
chr3 (343-526)||(6503569-6503752)
chr3 (346-526)||(27935165-27935345)
chr3 (338-526)||(34084122-34084310)
chr3 (343-510)||(19565517-19565684)
chr3 (359-526)||(19390146-19390313)
chr3 (343-526)||(45335859-45336041)
chr3 (360-526)||(22968444-22968610)
chr3 (360-525)||(6269427-6269592)
chr3 (343-526)||(39771774-39771957)
chr3 (347-526)||(35514254-35514429)
chr3 (372-526)||(40081741-40081893)
chr3 (381-485)||(5135291-5135397)
chr3 (343-396)||(6890982-6891035)
chr3 (347-459)||(5354697-5354809)
chr3 (341-416)||(22922139-22922214)
chr3 (478-526)||(22922214-22922262)
chr3 (492-526)||(5135421-5135455)
chr3 (426-493)||(38282459-38282526)
chr3 (333-365)||(50663288-50663320)
[»] chr5 (22 HSPs)
chr5 (343-526)||(31680351-31680534)
chr5 (343-526)||(37254625-37254808)
chr5 (338-526)||(17332551-17332739)
chr5 (343-526)||(12278860-12279043)
chr5 (343-526)||(31501716-31501899)
chr5 (373-526)||(33430335-33430488)
chr5 (359-523)||(10033927-10034091)
chr5 (359-526)||(13817977-13818144)
chr5 (337-525)||(1776377-1776565)
chr5 (359-523)||(39657509-39657673)
chr5 (343-526)||(26283318-26283501)
chr5 (343-526)||(36291355-36291538)
chr5 (361-526)||(19985941-19986106)
chr5 (359-526)||(36293621-36293788)
chr5 (359-526)||(39434696-39434863)
chr5 (377-526)||(16155015-16155164)
chr5 (378-526)||(43068896-43069044)
chr5 (389-523)||(16333879-16334013)
chr5 (359-510)||(3155647-3155798)
chr5 (372-485)||(28801300-28801415)
chr5 (343-444)||(202623-202724)
chr5 (343-415)||(26543876-26543948)
[»] chr4 (46 HSPs)
chr4 (335-526)||(6690235-6690426)
chr4 (343-526)||(30216742-30216925)
chr4 (343-526)||(43143584-43143767)
chr4 (343-526)||(3292896-3293079)
chr4 (338-524)||(50205079-50205265)
chr4 (329-526)||(10352884-10353081)
chr4 (345-514)||(42333788-42333957)
chr4 (347-526)||(48989316-48989495)
chr4 (338-526)||(36382346-36382533)
chr4 (359-526)||(25930708-25930875)
chr4 (343-526)||(28877250-28877433)
chr4 (376-526)||(44156668-44156818)
chr4 (343-526)||(20129294-20129477)
chr4 (343-526)||(29995983-29996166)
chr4 (343-526)||(26439279-26439462)
chr4 (343-526)||(26448037-26448219)
chr4 (343-526)||(34407284-34407467)
chr4 (383-526)||(35545977-35546120)
chr4 (362-523)||(29319708-29319869)
chr4 (343-526)||(13012172-13012355)
chr4 (343-526)||(47500757-47500940)
chr4 (343-526)||(30077631-30077813)
chr4 (343-526)||(43355888-43356071)
chr4 (369-526)||(17511233-17511391)
chr4 (394-526)||(1817752-1817884)
chr4 (414-526)||(6235575-6235687)
chr4 (372-523)||(40529028-40529179)
chr4 (348-485)||(30109945-30110084)
chr4 (437-514)||(13392893-13392970)
chr4 (437-514)||(13396032-13396109)
chr4 (371-485)||(48129978-48130087)
chr4 (347-459)||(45194164-45194276)
chr4 (343-444)||(27363345-27363446)
chr4 (343-397)||(7769312-7769366)
chr4 (343-396)||(49908782-49908835)
chr4 (384-452)||(6254569-6254637)
chr4 (338-396)||(5517494-5517552)
chr4 (343-395)||(6212029-6212081)
chr4 (343-395)||(17554980-17555032)
chr4 (343-396)||(50720476-50720529)
chr4 (492-526)||(30110108-30110142)
chr4 (492-526)||(48130111-48130145)
chr4 (343-420)||(13392976-13393053)
chr4 (343-420)||(13396115-13396192)
chr4 (339-444)||(20113771-20113876)
chr4 (343-395)||(12680193-12680245)
[»] chr2 (24 HSPs)
chr2 (343-526)||(45418567-45418750)
chr2 (338-525)||(8147330-8147518)
chr2 (343-526)||(44084603-44084786)
chr2 (343-525)||(770978-771165)
chr2 (377-526)||(12756837-12756986)
chr2 (362-526)||(41251634-41251798)
chr2 (359-523)||(42439986-42440150)
chr2 (343-523)||(8059336-8059516)
chr2 (365-523)||(18981622-18981780)
chr2 (338-526)||(31581622-31581810)
chr2 (359-523)||(35962715-35962879)
chr2 (343-526)||(6403804-6403987)
chr2 (359-523)||(32127144-32127308)
chr2 (359-526)||(17445041-17445206)
chr2 (362-523)||(16405603-16405764)
chr2 (359-496)||(2958131-2958267)
chr2 (384-523)||(2285887-2286026)
chr2 (378-526)||(26162702-26162847)
chr2 (357-459)||(26237955-26238056)
chr2 (346-485)||(4555250-4555390)
chr2 (368-485)||(7072589-7072710)
chr2 (343-415)||(34523224-34523296)
chr2 (379-438)||(34905969-34906028)
chr2 (496-526)||(26238080-26238110)
[»] chr7 (23 HSPs)
chr7 (343-526)||(34389056-34389239)
chr7 (343-526)||(37002144-37002327)
chr7 (343-526)||(26624729-26624913)
chr7 (368-526)||(35090177-35090335)
chr7 (347-524)||(8867733-8867910)
chr7 (338-526)||(7002704-7002892)
chr7 (338-526)||(7048575-7048763)
chr7 (343-526)||(33685548-33685731)
chr7 (382-525)||(38638237-38638380)
chr7 (343-526)||(43184468-43184651)
chr7 (359-523)||(5555487-5555651)
chr7 (342-526)||(36630799-36630983)
chr7 (339-526)||(8394105-8394292)
chr7 (362-523)||(3114099-3114260)
chr7 (377-526)||(36658199-36658348)
chr7 (360-524)||(14777109-14777273)
chr7 (378-526)||(40920003-40920151)
chr7 (338-449)||(26502789-26502899)
chr7 (338-449)||(26589815-26589925)
chr7 (426-485)||(10868514-10868575)
chr7 (338-395)||(37966614-37966671)
chr7 (357-404)||(10876829-10876876)
chr7 (492-526)||(10868456-10868490)
[»] chr8 (16 HSPs)
chr8 (337-526)||(23402086-23402275)
chr8 (346-526)||(34136825-34137005)
chr8 (345-526)||(4403994-4404175)
chr8 (357-526)||(16788025-16788194)
chr8 (336-526)||(36408528-36408718)
chr8 (341-523)||(15838268-15838449)
chr8 (359-526)||(29728386-29728553)
chr8 (381-513)||(9877242-9877374)
chr8 (373-526)||(3648794-3648947)
chr8 (343-526)||(2729196-2729379)
chr8 (360-526)||(39914516-39914681)
chr8 (391-526)||(42230971-42231104)
chr8 (375-485)||(3435285-3435397)
chr8 (382-485)||(40470533-40470637)
chr8 (339-444)||(10397122-10397227)
chr8 (492-526)||(40470475-40470509)
[»] scaffold0502 (1 HSPs)
scaffold0502 (359-526)||(5230-5397)
[»] chr1 (17 HSPs)
chr1 (343-526)||(35907536-35907719)
chr1 (343-525)||(17445297-17445479)
chr1 (343-526)||(3828968-3829150)
chr1 (343-526)||(321377-321560)
chr1 (363-523)||(7433449-7433609)
chr1 (343-526)||(26144239-26144422)
chr1 (359-526)||(32982056-32982223)
chr1 (359-526)||(42310941-42311108)
chr1 (343-485)||(41972314-41972457)
chr1 (343-485)||(33489671-33489815)
chr1 (367-462)||(23313246-23313342)
chr1 (343-395)||(44352614-44352666)
chr1 (343-396)||(31866961-31867014)
chr1 (338-422)||(48901209-48901292)
chr1 (492-526)||(33489839-33489873)
chr1 (492-526)||(41972256-41972290)
chr1 (378-444)||(35951427-35951493)
[»] scaffold0154 (1 HSPs)
scaffold0154 (343-526)||(31464-31647)
[»] scaffold0041 (1 HSPs)
scaffold0041 (378-526)||(52944-53092)
[»] scaffold0069 (1 HSPs)
scaffold0069 (359-526)||(17842-18009)
[»] scaffold0002 (1 HSPs)
scaffold0002 (343-526)||(480457-480640)
[»] scaffold2142 (1 HSPs)
scaffold2142 (343-526)||(506-689)
[»] scaffold0769 (1 HSPs)
scaffold0769 (343-415)||(1261-1333)
[»] scaffold0012 (1 HSPs)
scaffold0012 (352-416)||(194021-194085)


Alignment Details
Target: chr6 (Bit Score: 314; Significance: 1e-177; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 19 - 340
Target Start/End: Complemental strand, 1039548 - 1039227
Alignment:
Q  19 atgaacaaaacaaaaaatcagtaaataagtcacaaaaatacttcaaccataggaaatataaacgaaggaagggatttaaagggagaatagtggtagtgaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1039548 atgaacaaaacaaaaaatcagtaaataagtcacaaaaatacttcaaccataggaaatataaacgaaggaagggatttaaagggagaatagtggtagtgaa 1039449  T
Q  119 ataaaattaagagagtggaggttgtagtagattatatattagggttgtgaaatgaatgatgaagagatgctagggcttagggggatttatatgagaagaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  1039448 ataaaattaagagagtggaggttgtagtagattatatattagggttgtgaaatgaatgatgaagagatgctagggtttaggggtatttatatgagaagaa 1039349  T
Q  219 attatgagtttcaccgttagatttgatttcaacttgtgtggacaaatctggtccaaccaaatatgaagcacaatccatgtcttactcaagaggaccaatc 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1039348 attatgagtttcaccgttagatttgatttcaacttgtgtggacaaatctggtccaaccaaatatgaagcacaatccatgtcttactcaagaggaccaatc 1039249  T
Q  319 atcaagttacacctttcattca 340  Q
    ||||||||||||||||||||||    
T  1039248 atcaagttacacctttcattca 1039227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 28996714 - 28996897
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  28996714 ggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaa 28996813  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28996814 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 359 - 526
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 29743267 - 29743450
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||||||| ||| |||||||||| |||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||||| ||||| |    
T  29743267 ggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacaga 29743366  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||| ||||||||    
T  29743367 aagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctc 29743450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 359 - 523
Target Start/End: Complemental strand, 34948925 - 34948761
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  34948925 ggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 34948826  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    |||| |||||| |||||| ||||||| ||| | ||||||||||||||||||||||||||||||||    
T  34948825 atctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 359 - 523
Target Start/End: Original strand, 13837821 - 13837985
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    |||||||||||||| |||| |||| |||||||||||||| || ||||||||| |||||||||||   || |||||| |||||||||||||||||||||||    
T  13837821 ggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaatttgggca 13837920  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13837921 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 398601 - 398784
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||   ||||||||| ||| |||    
T  398601 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaa 398700  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||| | |||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  398701 aagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 375 - 526
Target Start/End: Complemental strand, 33229487 - 33229336
Alignment:
Q  375 cgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcac 474  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| |||||||| ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  475 acgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||| ||||| ||||||| ||||||||||||||||||||| ||| ||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 1037504 - 1037408
Alignment:
Q  198 gggggatttatatgagaagaaattatgagtttcaccgttagatttgatttcaacttgtgtggacaaatctggtccaaccaaatatgaagcacaatccat 296  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||  ||||||||||||||||    
T  1037504 ggggtatttatatgagaagaaattatgagtttcaccgttagatttgatttcaacttttgtggacaaatccagtccaaccaa--atgaagcacaatccat 1037408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 339 - 444
Target Start/End: Complemental strand, 24698004 - 24697899
Alignment:
Q  339 cagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactta 438  Q
    ||||||||||||||||| ||||||||||||| |  |||||||||||| ||||||||||| | |||||||| ||||||||||||| | |||||||||||||    
T  24698004 cagtggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacactta 24697905  T
Q  439 caaaaa 444  Q
    ||||||    
T  24697904 caaaaa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 345 - 455
Target Start/End: Complemental strand, 31028545 - 31028435
Alignment:
Q  345 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaa 444  Q
    ||||||||||| |||||||||||| ||||| |||||| ||||||||||||||| ||||||||||| |||||| |||||   ||||||||| |||||||||    
T  31028545 cggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaa 31028446  T
Q  445 gaaaaatttgg 455  Q
    | ||| |||||    
T  31028445 ggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 13647001 - 13647053
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 395  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13647001 ggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 34385571 - 34385519
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 395  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  34385571 ggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataat 34385519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 396
Target Start/End: Original strand, 2753336 - 2753387
Alignment:
Q  345 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 396  Q
    ||||||||||||||||||||||  |||||||||||| |||| ||||||||||    
T  2753336 cggtttcaccgtccggcgaccctaggcggtcgcccgagctcaatcgataatt 2753387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 21149389 - 21149331
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 396  Q
    |||| ||| ||||||||| |||| |||| ||||||||||| |||||| |||||||||||    
T  21149389 tcaggggcagtttcaccgcccggtgacctcgggcggtcgctcgggcttgatcgataatt 21149331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 444
Target Start/End: Original strand, 24695471 - 24695572
Alignment:
Q  342 tggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaa 441  Q
    ||||||||||||||||||  |||| ||| |  |||||| ||||  |||||| |||| |  ||||||| | ||||||||||| | ||||||||||||||||    
T  24695471 tggcggtttcaccgtccga-gacctcggacactcgcccaggctaaatcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaa 24695569  T
Q  442 aaa 444  Q
    |||    
T  24695570 aaa 24695572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 5e-85; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 45182965 - 45183148
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  45182965 ggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaa 45183064  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45183065 aagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 11018395 - 11018212
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  11018395 ggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaa 11018296  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  11018295 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 6931077 - 6930894
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||||| |||||||    
T  6931077 ggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaa 6930978  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6930977 aagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 33040937 - 33041120
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||||  ||||||||||||||||||    
T  33040937 ggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaa 33041036  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||  |||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33041037 aagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 6503752 - 6503569
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||| |||||| ||||||||||||    
T  6503752 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttacaaa 6503653  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||  ||||||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  6503652 aagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 346 - 526
Target Start/End: Original strand, 27935165 - 27935345
Alignment:
Q  346 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaag 445  Q
    |||||||||| | ||| |||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||   ||||||||||||||||||||    
T  27935165 ggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaag 27935264  T
Q  446 aaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27935265 aaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 338 - 526
Target Start/End: Complemental strand, 34084310 - 34084122
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    ||||||||||||  |||||  ||||||||||||||||||||||| ||||||||||||||| ||||||||| |  ||||| ||||||| ||||||||| ||    
T  34084310 tcagtggcggttctaccgtatggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacattt 34084211  T
Q  438 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  34084210 acaaaaagaaaaatttgggcaatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 343 - 510
Target Start/End: Complemental strand, 19565684 - 19565517
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||| |||||||||||||||||| || ||||||||||| |||||||||||||||||| |||| || ||||||||| |||||||    
T  19565684 ggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaa 19565585  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacta 510  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  19565584 aagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 359 - 526
Target Start/End: Original strand, 19390146 - 19390313
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||| ||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||| ||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 19390313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 45335859 - 45336041
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||||| | |||||||||||||||| |||||||| |||||||| |||||||    
T  45335859 ggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttacaaa 45335957  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| || ||| ||||||||    
T  45335958 aagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctc 45336041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 360 - 526
Target Start/End: Complemental strand, 22968610 - 22968444
Alignment:
Q  360 gcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 459  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||  |||||||||| | ||||||||| ||||||||||||||||||||||||    
T  22968610 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 22968511  T
Q  460 tctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||| ||||||| |||||||||| | |||||||||||||||||||||||| | ||||||||    
T  22968510 tctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 22968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 360 - 525
Target Start/End: Complemental strand, 6269592 - 6269427
Alignment:
Q  360 gcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 459  Q
    |||| |||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  6269592 gcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 6269493  T
Q  460 tctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 525  Q
    ||| |||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||    
T  6269492 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 39771774 - 39771957
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| | ||||||||| ||| |||    
T  39771774 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaa 39771873  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  39771874 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 39771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 347 - 526
Target Start/End: Original strand, 35514254 - 35514429
Alignment:
Q  347 gtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaaga 446  Q
    ||||||||| ||||||||||||| |||||| ||||||||||||||||||||  ||| | |||| |||||||||||||| ||||||||||    |||||||    
T  35514254 gtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacacac----aaaaaga 35514349  T
Q  447 aaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||| |||| | ||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  35514350 aaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 372 - 526
Target Start/End: Complemental strand, 40081893 - 40081741
Alignment:
Q  372 ggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattct 471  Q
    |||||||||||||||||||||||||| || ||||||||| ||||| |||  ||| |||||||| ||||||||||||||||||||||||| | |||||| |    
T  40081893 ggtcgcccgggctcgatcgataatttttgaacattagactcaaccaaaagctca-ttaacacatttacaaaaagaaaaatttgggcaatttgaaaattgt 40081795  T
Q  472 cacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||| ||| || ||||| ||||||||||||||||||||||||||||    
T  40081794 cacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 485
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  381 ggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc--aatctaaaaattctcacacgc 478  Q
    |||||||||||| |||| || ||||||||||||||| |||||   |||||||||||||||||||||||||||||| |  ||||  ||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  479 aaatagg 485  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 6890982 - 6891035
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 396  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  6890982 ggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 459
Target Start/End: Original strand, 5354697 - 5354809
Alignment:
Q  347 gtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaaga 446  Q
    ||||||||| |||||||||||||||||||||||||||||||||  ||||||   ||||||||  |||||| | | | | ||| ||||||||  ||||| |    
T  5354697 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattaggtccaacctataggcccatttacacacttcaaaaaaaa 5354796  T
Q  447 aaaatttgggcaa 459  Q
    |||| ||||||||    
T  5354797 aaaaattgggcaa 5354809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 22922139 - 22922214
Alignment:
Q  341 gtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacc 416  Q
    ||||||||| ||||||  ||||| ||||||||||||| |||||||||||||| |||| ||||||||| || |||||    
T  22922139 gtggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 526
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  478 caaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 526
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q  492 aattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctc 5135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 38282459 - 38282526
Alignment:
Q  426 attaacacacttacaaaaagaaaaatttgggcaa--tctaaaaattctcacacgcaaataggtctcggaa 493  Q
    |||||| |||||| ||||||||||  ||||||||  |||||||||||||||| ||||| |||||||||||    
T  38282459 attaacccacttaaaaaaagaaaa--ttgggcaaaatctaaaaattctcacatgcaaagaggtctcggaa 38282526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 365
Target Start/End: Complemental strand, 50663320 - 50663288
Alignment:
Q  333 ttcattcagtggcggtttcaccgtccggcgacc 365  Q
    ||||| |||||||||||||||||||||||||||    
T  50663320 ttcatgcagtggcggtttcaccgtccggcgacc 50663288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 1e-82; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 31680351 - 31680534
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||| |||||||||||||||||||    
T  31680351 ggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaa 31680450  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31680451 aagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 37254625 - 37254808
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    |||||||||||||  |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37254625 ggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaa 37254724  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37254725 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 338 - 526
Target Start/End: Complemental strand, 17332739 - 17332551
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  17332739 tcaggggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacactt 17332640  T
Q  438 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17332639 acaaaaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 12279043 - 12278860
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||    
T  12279043 ggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaa 12278944  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12278943 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 31501899 - 31501716
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  31501899 ggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaa 31501800  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||||    
T  31501799 aagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc 31501716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 373 - 526
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  373 gtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctc 472  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  473 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 359 - 523
Target Start/End: Original strand, 10033927 - 10034091
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  10033927 ggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 10034026  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10034027 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 359 - 526
Target Start/End: Original strand, 13817977 - 13818144
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  13817977 ggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 13818076  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  13818077 atctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 337 - 525
Target Start/End: Complemental strand, 1776565 - 1776377
Alignment:
Q  337 ttcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacact 436  Q
    |||||||||||||  |||||  | ||||||||||||||||||||||||||||||||||||| || |||||| |  ||||| ||||||| ||||||||| |    
T  1776565 ttcagtggcggttctaccgtatgacgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatt 1776466  T
Q  437 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 525  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  1776465 tacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 359 - 523
Target Start/End: Complemental strand, 39657673 - 39657509
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||| | ||||||  |||||||||| |||||||| |||||||||||| |||||||||||   ||||||||| |||||||||||||||||||||||    
T  39657673 ggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 39657574  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39657573 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 26283501 - 26283318
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||  ||||||||| ||| |||    
T  26283501 ggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaa 26283402  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  26283401 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 36291355 - 36291538
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||| |||| ||||||||||| ||||| |||||| ||||||| ||||||||||| | |||| ||||||  ||||||||| |||||||    
T  36291355 ggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaa 36291454  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||| | |||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36291455 aagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 361 - 526
Target Start/End: Original strand, 19985941 - 19986106
Alignment:
Q  361 cgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaat 460  Q
    ||||| |||||||||| ||| |||||||||||||||| |||||||||||  ||||||||||||| |||| |||| ||||||||||||||||||||| |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  461 ctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||| |||||||||||||||||| | ||||||||||| |||||||||||| ||||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 359 - 526
Target Start/End: Complemental strand, 36293788 - 36293621
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    |||||||||| ||||||| |||| ||||||||||||||| || ||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  36293788 ggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 36293689  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||| ||||||| |||||||||| ||||||||||||||||||||||| || | ||||||||    
T  36293688 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctc 36293621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 359 - 526
Target Start/End: Original strand, 39434696 - 39434863
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    |||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  39434696 ggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatgaaaaatttgggca 39434795  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||| ||||| | ||||||||||  ||||||||||||||||||||||||| | ||||||||    
T  39434796 atctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctc 39434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 377 - 526
Target Start/End: Original strand, 16155015 - 16155164
Alignment:
Q  377 cccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacac 476  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| ||| |||||||||||||| |||||||| |||||| ||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  477 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgacagattcatctc 16155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 378 - 526
Target Start/End: Original strand, 43068896 - 43069044
Alignment:
Q  378 ccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacg 477  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||| ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  478 caaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
     ||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 16334013 - 16333879
Alignment:
Q  389 cgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtct 488  Q
    ||||||||| |||||||||||  ||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  489 cggaattttatttagcacactattgacgggttcat 523  Q
     |||||||||||||||||||||||||||| |||||    
T  16333913 tggaattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 359 - 510
Target Start/End: Complemental strand, 3155798 - 3155647
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||| ||||||||||||| ||||||||||| ||||||| |||||||| ||| ||||| ||||||| ||||||||| ||| |||||||||||||||| ||    
T  3155798 ggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggaca 3155699  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacacta 510  Q
    |||| |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  3155698 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 372 - 485
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  372 ggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttggg--caatctaaaaatt 469  Q
    |||||||| ||||||||||||||||| ||||||||||| |||| ||||||| | |||||||||||||||||||||||||||||||   ||| | ||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  470 ctcacacgcaaatagg 485  Q
    ||||||||||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 444
Target Start/End: Original strand, 202623 - 202724
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||| ||||||  || ||||||||||||||||||||||||||||| |||||||  | |||||||||| | ||||| ||||| |||||    
T  202623 ggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacactaacaaa 202722  T
Q  443 aa 444  Q
    ||    
T  202723 aa 202724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 415
Target Start/End: Complemental strand, 26543948 - 26543876
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaac 415  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  26543948 ggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 26543876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 1e-82; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 335 - 526
Target Start/End: Complemental strand, 6690426 - 6690235
Alignment:
Q  335 cattcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacaca 434  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  6690426 cattcaggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacaca 6690327  T
Q  435 cttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  6690326 cttacaaaaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 30216925 - 30216742
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  30216925 ggcggattcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaa 30216826  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30216825 aagaaaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 43143767 - 43143584
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  43143767 ggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaa 43143668  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  43143667 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 3293079 - 3292896
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  3293079 ggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaa 3292980  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3292979 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 338 - 524
Target Start/End: Complemental strand, 50205265 - 50205079
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  50205265 tcaggggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacactt 50205166  T
Q  438 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 524  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50205165 acaaaaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 329 - 526
Target Start/End: Complemental strand, 10353081 - 10352884
Alignment:
Q  329 acctttcattcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaatt 428  Q
    ||||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||    
T  10353081 accttacatacaggggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccatt 10352982  T
Q  429 aacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||| |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||||||||    
T  10352981 aacacatttacaaaaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctc 10352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 345 - 514
Target Start/End: Complemental strand, 42333957 - 42333788
Alignment:
Q  345 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaa 444  Q
    |||||||||||||| |||| |||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  42333957 cggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 42333858  T
Q  445 gaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 514  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42333857 gaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 347 - 526
Target Start/End: Original strand, 48989316 - 48989495
Alignment:
Q  347 gtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaaga 446  Q
    ||||||||| ||| |||| ||||||||||  ||||| |||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  48989316 gtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaaga 48989415  T
Q  447 aaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48989416 aaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 338 - 526
Target Start/End: Complemental strand, 36382533 - 36382346
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||| ||||||| ||||||||| ||    
T  36382533 tcagtggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacattt 36382434  T
Q  438 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||| ||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36382433 acaaaa-gaaaaatttggacaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 359 - 526
Target Start/End: Original strand, 25930708 - 25930875
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  25930708 ggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 25930807  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    || | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25930808 atttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 28877433 - 28877250
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    |||||||||||||||||  ||||||| ||||||||  ||||| |||||||||||| |||||||||||  ||||| |||||  ||||||||| |||| |||    
T  28877433 ggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaa 28877334  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28877333 aagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 376 - 526
Target Start/End: Original strand, 44156668 - 44156818
Alignment:
Q  376 gcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaca 475  Q
    |||||||||| | ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| ||||||||| ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  476 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 20129294 - 20129477
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| |||||||    
T  20129294 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 20129393  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||| ||||||||||||| | ||||||||    
T  20129394 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctc 20129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 29996166 - 29995983
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||| ||| ||||| |||||| |||| ||||||||||||||| || ||||||||| ||||| ||||||| ||||||||| |||| ||    
T  29996166 ggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaa 29996067  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  29996066 aagaaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 26439462 - 26439279
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| | ||||||||| ||| |||    
T  26439462 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaa 26439363  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  26439362 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 26439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 26448037 - 26448219
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| |||||||| ||| ||| ||| |||| ||||||||||||||| ||||||||| | | |||||||||||| |||||||||||||||||    
T  26448037 ggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaa 26448136  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    || ||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||||||||||||| ||| || |||||    
T  26448137 aa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattggcggatttatctc 26448219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 34407467 - 34407284
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| | ||||||||| ||| |||    
T  34407467 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaa 34407368  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  34407367 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 34407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 383 - 526
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  383 ctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaat 482  Q
    ||||||||| ||||| ||| ||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  483 aggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
     |||||| |||||||||||||||||||||||| |||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 362 - 523
Target Start/End: Complemental strand, 29319869 - 29319708
Alignment:
Q  362 gaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatc 461  Q
    |||||| |||||||| || ||||||||||||||||| |||||||||||| ||||||||||  | ||||||||| ||||||||||||||||||| ||||||    
T  29319869 gacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatc 29319770  T
Q  462 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    | |||||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  29319769 tgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 13012172 - 13012355
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| |||||   ||||||||| ||| |||    
T  13012172 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataaa 13012271  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||| | |||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  13012272 aagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 13012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 47500757 - 47500940
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||   ||||||||| |||  ||    
T  47500757 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaa 47500856  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||| | |||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  47500857 aagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 47500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 30077813 - 30077631
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||| ||||| ||||||||||||| ||||| |||||||| || |||||||||||||||||| ||||||  ||||||||| |||||||    
T  30077813 ggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaa 30077715  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||| |||||| |||||| | |||| ||||||||||| | ||||||||||||||||||| || ||| ||||||||    
T  30077714 aagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctc 30077631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 43355888 - 43356071
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||||||| ||| |||||||||||||| |||||||||| |||||||||||| ||||||||||| | ||||||||| ||| |||    
T  43355888 ggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaa 43355987  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  43355988 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 43356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 369 - 526
Target Start/End: Complemental strand, 17511391 - 17511233
Alignment:
Q  369 ggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaat 468  Q
    ||||||||||| | ||||||||||||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||| | |||||    
T  17511391 ggcggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaat 17511292  T
Q  469 tctcacacgcaaataggtctcgg-aattttatttagcacactattgacgggttcatctc 526  Q
    | | |||||||||||||||| || |||||||||||||||| ||||||  ||||||||||    
T  17511291 tgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 394 - 526
Target Start/End: Original strand, 1817752 - 1817884
Alignment:
Q  394 atttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaa 493  Q
    |||| ||||||||||| |||| ||||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  494 ttttatttagcacactattgacgggttcatctc 526  Q
    ||||||||| |||||||||| ||| ||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 414 - 526
Target Start/End: Original strand, 6235575 - 6235687
Alignment:
Q  414 acccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattg 513  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattg 6235674  T
Q  514 acgggttcatctc 526  Q
    |||||||||||||    
T  6235675 acgggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 523
Target Start/End: Original strand, 40529028 - 40529179
Alignment:
Q  372 ggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattct 471  Q
    ||||| |||| ||||||||||||||| ||||||||| || ||||| ||||    ||||||||| |||||||||||||||||||| |||| | |||||| |    
T  40529028 ggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttggacaatttgaaaattgt 40529127  T
Q  472 cacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  40529128 cacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 348 - 485
Target Start/End: Original strand, 30109945 - 30110084
Alignment:
Q  348 tttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaa 447  Q
    |||||||| ||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| || |||| | ||||||||||||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  448 aaatttgggc--aatctaaaaattctcacacgcaaatagg 485  Q
    |||||||| |  ||| | |||| |||||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  437 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  437 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 371 - 485
Target Start/End: Original strand, 48129978 - 48130087
Alignment:
Q  371 cggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattc 470  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||||   |||||||||||||||||||||||||||||||     | |||| ||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg-----tgaaaactc 48130072  T
Q  471 tcacacgcaaatagg 485  Q
    |||||||||||||||    
T  48130073 tcacacgcaaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 347 - 459
Target Start/End: Original strand, 45194164 - 45194276
Alignment:
Q  347 gtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaaga 446  Q
    ||||||||| ||| ||||||| |||| | |||||| ||||||| ||||||| ||||||||| || ||||||||||||| ||||||||||||||||||| |    
T  45194164 gtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaa 45194263  T
Q  447 aaaatttgggcaa 459  Q
    |||  ||||||||    
T  45194264 aaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 343 - 444
Target Start/End: Original strand, 27363345 - 27363446
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    |||||||| |||||  ||||||| |||||||||||||||||||||||||   ||| |||| ||||| ||||||||||||| | |||||||||||||||||    
T  27363345 ggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaaa 27363444  T
Q  443 aa 444  Q
    ||    
T  27363445 aa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 7769312 - 7769366
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataattt 397  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7769312 ggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataattt 7769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 49908835 - 49908782
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 396  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49908835 ggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  384 tcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatt 452  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||| |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 5517552 - 5517494
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 396  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  5517552 tcaggggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 6212081 - 6212029
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 395  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  6212081 ggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 17554980 - 17555032
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 395  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17554980 ggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgatcgataat 17555032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 50720529 - 50720476
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 396  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||    
T  50720529 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggctcaatcaataatt 50720476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 526
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q  492 aattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctc 30110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 526
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q  492 aattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctc 48130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 420
Target Start/End: Complemental strand, 13393053 - 13392976
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaa 420  Q
    ||||||||||||| || |||||||||| ||||||||||||||| |||||| | || |||| |||| | |||||| |||    
T  13393053 ggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaacctaaa 13392976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 420
Target Start/End: Complemental strand, 13396192 - 13396115
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaa 420  Q
    ||||||||||||| || |||||||||| ||||||||||||||| |||||| | || |||| |||| | |||||| |||    
T  13396192 ggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaacctaaa 13396115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 444
Target Start/End: Original strand, 20113771 - 20113876
Alignment:
Q  339 cagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactta 438  Q
    ||||||||||| ||||| | ||||||||||| |  |||||||  ||| ||||||||||| |  |||||||   ||||||||||| | |||||||||||||    
T  20113771 cagtggcggttccaccgcctggcgaccccggacactcgcccgaactcaatcgataatttctttacattaggttcaacccaaaagccgattaacacactta 20113870  T
Q  439 caaaaa 444  Q
     |||||    
T  20113871 aaaaaa 20113876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 12680245 - 12680193
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 395  Q
    ||||||||||||| || || ||||| |||||| ||||||||||||||||||||    
T  12680245 ggcggtttcaccgcccagcaaccccaggcggtggcccgggctcgatcgataat 12680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 1e-82; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 45418567 - 45418750
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||    
T  45418567 ggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaa 45418666  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45418667 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 8147330 - 8147518
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  8147330 tcaggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacactt 8147429  T
Q  438 acaaaaagaaaaatttgggcaatct-aaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 525  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  8147430 acaaaaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 44084786 - 44084603
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| ||||||||  |||||||||||||||||    
T  44084786 ggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaa 44084687  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44084686 aagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 343 - 525
Target Start/End: Original strand, 770978 - 771165
Alignment:
Q  343 ggcggtttcaccgtccggcgacc-----ccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    ||||||||||||| |||||||||     ||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| | ||||||||||||    
T  770978 ggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacactt 771077  T
Q  438 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 525  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  771078 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 377 - 526
Target Start/End: Complemental strand, 12756986 - 12756837
Alignment:
Q  377 cccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacac 476  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  12756986 cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 12756887  T
Q  477 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12756886 gcaaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 362 - 526
Target Start/End: Complemental strand, 41251798 - 41251634
Alignment:
Q  362 gaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatc 461  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  462 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    | |||||| ||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 41251634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 359 - 523
Target Start/End: Original strand, 42439986 - 42440150
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||| | ||||||||| |||||||||||||||||||||||    
T  42439986 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 42440085  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    |||| |||||| |||||||||||||||||| | |||||||||||||||||||||||||| |||||    
T  42440086 atctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 343 - 523
Target Start/End: Complemental strand, 8059516 - 8059336
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||| ||||||||| || |||||| ||||| ||||||||||| |||||||||||  ||||||||||| |||||||||||||||||||    
T  8059516 ggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaa 8059417  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    ||||||||||||| |||| | ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  8059416 aagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 365 - 523
Target Start/End: Original strand, 18981622 - 18981780
Alignment:
Q  365 cccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaa 464  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||||| ||||| ||| ||||||||||||||||||||||||| |||    
T  18981622 cccgggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaa 18981721  T
Q  465 aaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  18981722 aaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 338 - 526
Target Start/End: Complemental strand, 31581810 - 31581622
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    ||||||||||||  || ||  ||||||| ||||||||||||| ||||||| ||||| ||| |||| ||||||| || |||||||| | ||||||||| ||    
T  31581810 tcagtggcggttctactgtatggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacattt 31581711  T
Q  438 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31581710 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 359 - 523
Target Start/End: Original strand, 35962715 - 35962879
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||||   ||||||||| |||||||||||||| ||||||||    
T  35962715 ggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaattttgggca 35962814  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    |||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  35962815 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 6403987 - 6403804
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||  ||||||||| ||| |||    
T  6403987 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaa 6403888  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  6403887 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 6403804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 359 - 523
Target Start/End: Complemental strand, 32127308 - 32127144
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| || | |||||||||   ||||||||| |||||||||||||||||| ||||    
T  32127308 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggca 32127209  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    |||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  32127208 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 359 - 526
Target Start/End: Complemental strand, 17445206 - 17445041
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||| |||||||||||||| |||||||||||||||| |||||  ||||| ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  17445206 ggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17445109  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||| ||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||    
T  17445108 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 17445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 362 - 523
Target Start/End: Original strand, 16405603 - 16405764
Alignment:
Q  362 gaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatc 461  Q
    ||||| |||||||||||||||||| ||||||||||| ||||| |||||| |||||||||||   ||||||||| ||| |||||||||||||||| |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  462 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    | |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 359 - 496
Target Start/End: Complemental strand, 2958267 - 2958131
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| ||||||| ||||||||||||| |    
T  2958267 ggcgaccccgggcggtcgtccgggctcgatcgataattt-tgcacattagactcaacccaaaagcccattaacacatttacaaagagaaaaatttgggta 2958169  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattt 496  Q
    |||| |||||| |||||||||||||||||| |||||||    
T  2958168 atctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 2285887 - 2286026
Alignment:
Q  384 tcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaata 483  Q
    |||||||||||||| ||||||||| | |||||| ||||||| ||||||||| |||| ||| |||||||||| ||||||| |||||| |||||||||||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  484 ggtctcggaattttatttagcacactattgacgggttcat 523  Q
    ||| | ||||||||||||||||||||||||||| ||||||    
T  2285987 ggttttggaattttatttagcacactattgacgtgttcat 2286026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 378 - 526
Target Start/End: Complemental strand, 26162847 - 26162702
Alignment:
Q  378 ccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacg 477  Q
    ||||||||  |||||||||| | ||||||| |  ||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaaca 26162748  T
Q  478 caaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||   |||||||||||| ||||||||||||||||||    
T  26162747 caaataggtctcgga---ttatttagcacattattgacgggttcatctc 26162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 357 - 459
Target Start/End: Original strand, 26237955 - 26238056
Alignment:
Q  357 ccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttggg 456  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||  ||| ||||||||| |||||||||||||||||||||||||||||||    
T  26237955 ccggcgaccccgggcggtcgcccgggctcgatcgatatttt-tgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttggg 26238053  T
Q  457 caa 459  Q
    |||    
T  26238054 caa 26238056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 346 - 485
Target Start/End: Complemental strand, 4555390 - 4555250
Alignment:
Q  346 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaag 445  Q
    |||| ||||| ||||||| | |||||||||||  || ||||||||||||||| ||||||| | ||||||||||||||    |||||||||||||||||||    
T  4555390 ggttccaccgcccggcgatctcgggcggtcgct-ggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaag 4555292  T
Q  446 aaaaatttgggc--aatctaaaaattctcacacgcaaatagg 485  Q
    |||| |||||||  ||||| |||||||||||||| |||||||    
T  4555291 aaaattttgggcaaaatctgaaaattctcacacgtaaatagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 368 - 485
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  368 gggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaatta--acacacttacaaaaagaaaaatttgggcaa--tcta 463  Q
    |||||||||||||||||||||||||||||| |  |||||| || ||||||||||| | ||||  ||||||||| ||||||||||  |||| |||  |||     
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  464 aaaattctcacacgcaaatagg 485  Q
    ||||||||| |||| |||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 415
Target Start/End: Original strand, 34523224 - 34523296
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaac 415  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  34523224 ggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 34523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 438
Target Start/End: Original strand, 34905969 - 34906028
Alignment:
Q  379 cgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactta 438  Q
    ||||||||||||||||||| |||||||||  || |||||||||| | |||||||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 526
Target Start/End: Original strand, 26238080 - 26238110
Alignment:
Q  496 ttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||    
T  26238080 ttatttagcacactattgacgggttcatctc 26238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 3e-80; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 34389239 - 34389056
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  34389239 ggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaa 34389140  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  34389139 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 37002327 - 37002144
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  37002327 ggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaa 37002228  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37002227 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 26624729 - 26624913
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat-cgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaa 441  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||||| |||| ||||||||||| |||||||| |||||||||||||||||    
T  26624729 ggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaa 26624828  T
Q  442 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26624829 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 368 - 526
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q  368 gggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaa 467  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  468 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 347 - 524
Target Start/End: Complemental strand, 8867910 - 8867733
Alignment:
Q  347 gtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaaga 446  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| ||||||| ||| |||||||||||    
T  8867910 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaaga 8867811  T
Q  447 aaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 524  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8867810 aaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 338 - 526
Target Start/End: Original strand, 7002704 - 7002892
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||  |||| |  |||||| |||||||||||||| |||||||||||| |    
T  7002704 tcaggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacat 7002803  T
Q  438 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7002804 acaaaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 338 - 526
Target Start/End: Original strand, 7048575 - 7048763
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||  |||| |  |||||| |||||||||||||| |||||||||||| |    
T  7048575 tcaggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacat 7048674  T
Q  438 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7048675 acaaaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 33685548 - 33685731
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||| | |||||||||||||||||    
T  33685548 ggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaa 33685647  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||| |||||    
T  33685648 aagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 382 - 525
Target Start/End: Complemental strand, 38638380 - 38638237
Alignment:
Q  382 gctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaa 481  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  482 taggtctcggaattttatttagcacactattgacgggttcatct 525  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 43184651 - 43184468
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| |||||||  |||||||||||| ||||||||||||||||||| | | ||| ||||  |||||||||| ||||||||| |||||||||    
T  43184651 ggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaa 43184552  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43184551 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 359 - 523
Target Start/End: Original strand, 5555487 - 5555651
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||| || |||||||||||||||||||||||    
T  5555487 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaatttgggca 5555586  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    |||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  5555587 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 342 - 526
Target Start/End: Original strand, 36630799 - 36630983
Alignment:
Q  342 tggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaa 441  Q
    ||||||||  |||||  ||||||||||| ||||||||||||||||||||||||||| ||||||||| || ||||| ||||||| ||||||||| ||||||    
T  36630799 tggcggttctaccgtatggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaa 36630898  T
Q  442 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  36630899 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 339 - 526
Target Start/End: Original strand, 8394105 - 8394292
Alignment:
Q  339 cagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactta 438  Q
    |||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| ||||||| ||||||||| |||    
T  8394105 cagtggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacattta 8394204  T
Q  439 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||| |||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8394205 caaaaggaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 362 - 523
Target Start/End: Complemental strand, 3114260 - 3114099
Alignment:
Q  362 gaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatc 461  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  3114260 gaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 3114161  T
Q  462 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    | |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  3114160 tgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 377 - 526
Target Start/End: Original strand, 36658199 - 36658348
Alignment:
Q  377 cccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacac 476  Q
    ||||| ||||||||||||||| |||||||| ||||||||| ||||| ||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  477 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 360 - 524
Target Start/End: Complemental strand, 14777273 - 14777109
Alignment:
Q  360 gcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 459  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||   ||||||||| ||||||||||||||||||||||||    
T  14777273 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaa 14777174  T
Q  460 tctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 524  Q
    ||| |||||| ||||||| |||||||||| |||||||||||||||||||||||||| | ||||||    
T  14777173 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 14777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 378 - 526
Target Start/End: Complemental strand, 40920151 - 40920003
Alignment:
Q  378 ccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacg 477  Q
    |||||||||||||||||||| |||||||||||   |||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  478 caaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 449
Target Start/End: Original strand, 26502789 - 26502899
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    ||||||| |||| ||||||  ||||||||| ||| |||||||||||||||||||   ||| |||| ||||  ||||||||||||| | |||||||||| |    
T  26502789 tcagtggtggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-t 26502887  T
Q  438 acaaaaagaaaa 449  Q
    ||||||| ||||    
T  26502888 acaaaaaaaaaa 26502899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 449
Target Start/End: Complemental strand, 26589925 - 26589815
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactt 437  Q
    ||||||| |||| ||||||  ||||||||| ||| |||||||||||||||||||   ||| |||| ||||  ||||||||||||| | |||||||||| |    
T  26589925 tcagtggtggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-t 26589827  T
Q  438 acaaaaagaaaa 449  Q
    ||||||| ||||    
T  26589826 acaaaaaaaaaa 26589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 426 - 485
Target Start/End: Complemental strand, 10868575 - 10868514
Alignment:
Q  426 attaacacacttacaaaaagaaaaatttgggc--aatctaaaaattctcacacgcaaatagg 485  Q
    ||||||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||    
T  10868575 attaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 37966671 - 37966614
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 395  Q
    |||| ||||||||||||| ||||||||| | |||||||| ||| ||||||||||||||    
T  37966671 tcagaggcggtttcaccgcccggcgacctcaggcggtcgtccgagctcgatcgataat 37966614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 404
Target Start/End: Complemental strand, 10876876 - 10876829
Alignment:
Q  357 ccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcaca 404  Q
    ||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  10876876 ccggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 526
Target Start/End: Complemental strand, 10868490 - 10868456
Alignment:
Q  492 aattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||| ||||||||||||||||    
T  10868490 aattttatttagcacacttttgacgggttcatctc 10868456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 5e-79; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 337 - 526
Target Start/End: Original strand, 23402086 - 23402275
Alignment:
Q  337 ttcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacact 436  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| |||||||||||||    
T  23402086 ttcaggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacact 23402185  T
Q  437 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  23402186 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 346 - 526
Target Start/End: Complemental strand, 34137005 - 34136825
Alignment:
Q  346 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaag 445  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  34137005 ggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaag 34136906  T
Q  446 aaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  34136905 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 345 - 526
Target Start/End: Original strand, 4403994 - 4404175
Alignment:
Q  345 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaa 444  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| |||||||||||    
T  4403994 cggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaa 4404093  T
Q  445 gaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  4404094 gaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 357 - 526
Target Start/End: Complemental strand, 16788194 - 16788025
Alignment:
Q  357 ccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttggg 456  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  16788194 ccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg 16788095  T
Q  457 caatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16788094 caatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 336 - 526
Target Start/End: Original strand, 36408528 - 36408718
Alignment:
Q  336 attcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacac 435  Q
    |||||| || |||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||     
T  36408528 attcaggggtggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacat 36408627  T
Q  436 ttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||| ||| |||||| | |||||||| |||||| |||||||||| |||||||||||| |||||||||| ||| ||||||||    
T  36408628 ttacaaaaagaaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 341 - 523
Target Start/End: Original strand, 15838268 - 15838449
Alignment:
Q  341 gtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttaca 440  Q
    |||||||||  |||||  ||||||||||||||||| |||||||||||| |||||||| ||||||||| || ||||| ||||||| ||||||||| |||||    
T  15838268 gtggcggttctaccgtatggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttaca 15838367  T
Q  441 aaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    ||| |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15838368 aaa-gaaaaatttgggcaatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 359 - 526
Target Start/End: Complemental strand, 29728553 - 29728386
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||||| |||||||||| ||||||||||||| || |||||||||||| |||||||||||   ||||||||| |||||||||||||||||||||||    
T  29728553 ggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 29728454  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  29728453 atctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 381 - 513
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  381 ggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaa 480  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  481 ataggtctcggaattttatttagcacactattg 513  Q
    |||||||||| ||||||||||||||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 373 - 526
Target Start/End: Complemental strand, 3648947 - 3648794
Alignment:
Q  373 gtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctc 472  Q
    ||||||||||||||||||||||||| | |||||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||||||| |||||| ||    
T  3648947 gtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtc 3648848  T
Q  473 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||||||||||    
T  3648847 acacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 2729379 - 2729196
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||| | |||| ||||||| | ||||||||||||| |||    
T  2729379 ggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaa 2729280  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||  ||| |||||| | |||| ||||| |||||||||||||||  ||||||||||||||||||||||| || ||||||||    
T  2729279 aagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctc 2729196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 360 - 526
Target Start/End: Original strand, 39914516 - 39914681
Alignment:
Q  360 gcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 459  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||   ||||||||| ||| ||||| ||||||||||||||    
T  39914516 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaa 39914614  T
Q  460 tctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    | | |||||| ||||| | |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  39914615 tttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctc 39914681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 391 - 526
Target Start/End: Original strand, 42230971 - 42231104
Alignment:
Q  391 ataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcg 490  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  491 gaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||||||||||||||||| ||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 375 - 485
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  375 cgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc--aatctaaaaattctc 472  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  473 acacgcaaatagg 485  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 382 - 485
Target Start/End: Complemental strand, 40470637 - 40470533
Alignment:
Q  382 gctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc--aatctaaaaattctcacacgca 479  Q
    |||||||||||||||| ||||||||||||||||  |||||||| ||||||||||||| ||||| ||||| ||||||  |||||||||| || |||||| |    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaa-aaaaaattgggcaaaatctaaaaactcgcacacgta 40470539  T
Q  480 aatagg 485  Q
    ||||||    
T  40470538 aatagg 40470533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 444
Target Start/End: Complemental strand, 10397227 - 10397122
Alignment:
Q  339 cagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacactta 438  Q
    |||||| |||| ||||| |||||||| ||||||  |||||||||||| ||||||||||| | ||||||||   ||||||||||| | ||||||||| |||    
T  10397227 cagtggtggttacaccgcccggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagtta 10397128  T
Q  439 caaaaa 444  Q
     |||||    
T  10397127 aaaaaa 10397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 526
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q  492 aattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctc 40470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 359 - 526
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 35907536 - 35907719
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  35907536 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaa 35907635  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  35907636 aagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 343 - 525
Target Start/End: Original strand, 17445297 - 17445479
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||  | |||||||||||  ||||||||||||||| |||| ||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  17445297 ggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaa 17445396  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 525  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17445397 aagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 3828968 - 3829150
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    |||||||||| |  ||||| ||||||| ||||||| |||| |||||||||||||| ||||||||| |||||||||||||||  |||||||||||||||||    
T  3828968 ggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaa 3829067  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3829068 aagaaaaatttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 321560 - 321377
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||  |||||||   |||||||||| |||||||||||||||||||| ||  ||||||| |||||||||||||| ||||||||| |||||||    
T  321560 ggcggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaa 321461  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  321460 aagaaaaatttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 363 - 523
Target Start/End: Original strand, 7433449 - 7433609
Alignment:
Q  363 accccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatct 462  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||||||    
T  7433449 accccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatct 7433548  T
Q  463 aaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 523  Q
    ||||||| |||||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  7433549 aaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 26144239 - 26144422
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||   ||||||||| ||| |||    
T  26144239 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaa 26144338  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||| | |||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  26144339 aagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 359 - 526
Target Start/End: Complemental strand, 32982223 - 32982056
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||||| | ||||||| | |||||||||||||||||||| ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||| |||||| ||||||||||| ||||||||||||||||| |||||||| | ||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctc 32982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 359 - 526
Target Start/End: Complemental strand, 42311108 - 42310941
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    ||||||||| | || |||||||||||||||||||||||| |||||||||||| ||||||||||| |  |||||||| |||||||||||||||||||||||    
T  42311108 ggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaaaaagaaaaatttgggca 42311009  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||| ||||||||||||| |||| | |||||||||||| || |||||||||||||||||||    
T  42311008 atctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 343 - 485
Target Start/End: Complemental strand, 41972457 - 41972314
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| |||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||| |||||| ||||| | |||||||||||||||||    
T  41972457 ggcggttccaccgtccagcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaaa 41972359  T
Q  443 aagaaaaatttgg--gcaatctaaaaattctcacacgcaaatagg 485  Q
    |||||||||||||    ||||| ||||||||||||||||||||||    
T  41972358 aagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 343 - 485
Target Start/End: Original strand, 33489671 - 33489815
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||||||||  ||||||||||||| ||||||  |||| | | |||||||||| || ||||||||| ||| | ||||| | |||||||||||||| ||    
T  33489671 ggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaa 33489770  T
Q  443 aagaaaaatttgggc--aatctaaaaattctcacacgcaaatagg 485  Q
    |||||||||||| ||  ||||| ||||||||||||||||||||||    
T  33489771 aagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 367 - 462
Target Start/End: Original strand, 23313246 - 23313342
Alignment:
Q  367 cgggcggtcgcccgggctcgatcgataatttgt-gcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatct 462  Q
    |||||||| ||||||||||||| ||| |||||| ||||||||||| ||||  ||||||  ||||||||| |||||||||||||||||||||||||||    
T  23313246 cgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttacaaaaagaaaaatttgggcaatct 23313342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 44352666 - 44352614
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 395  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  44352666 ggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 31866961 - 31867014
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 396  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  31866961 ggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcgaccgataatt 31867014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 48901292 - 48901209
Alignment:
Q  338 tcagtggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaag 422  Q
    |||| ||||||| ||||| ||||| || ||||||||| ||| ||| |||||||||||||| |||||||||| |||||||||||||    
T  48901292 tcaggggcggttccaccgcccggcaactccgggcggtggccgggg-tcgatcgataatttatgcacattaggcccaacccaaaag 48901209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 526
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q  492 aattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctc 33489873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 526
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q  492 aattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||    
T  41972290 aattttatttagcacactattgacgggttcatctc 41972256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 444
Target Start/End: Complemental strand, 35951493 - 35951427
Alignment:
Q  378 ccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaa 444  Q
    |||||||||||||||||||| || |||||||  | ||||||| || | ||||||||||| |||||||    
T  35951493 ccgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaaa 35951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 31464 - 31647
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    |||||||||| || ||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  31464 ggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaa 31563  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||| | |||||||||| ||||||||||||| ||||||||||    
T  31564 aagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 113; Significance: 6e-57; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 378 - 526
Target Start/End: Original strand, 52944 - 53092
Alignment:
Q  378 ccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcacacg 477  Q
    |||||||||||||||||||| |||||||||||   |||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  478 caaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 359 - 526
Target Start/End: Original strand, 17842 - 18009
Alignment:
Q  359 ggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 458  Q
    |||||||||| ||| ||| |||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  17842 ggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17941  T
Q  459 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||| |||||| ||||| | |||||||||| | |||||||||||||||||||||||| | ||||||||    
T  17942 atctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 18009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 526
Target Start/End: Complemental strand, 480640 - 480457
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||   ||||||||| ||| |||    
T  480640 ggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaa 480541  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||| | |||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  480540 aagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 480457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 343 - 526
Target Start/End: Original strand, 506 - 689
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacccaaaagtcaattaacacacttacaaa 442  Q
    ||||||| ||||||   |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||   ||||||||| ||| |||    
T  506 ggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaa 605  T
Q  443 aagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 526  Q
    |||||||||||||||||| | |||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  606 aagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 415
Target Start/End: Original strand, 1261 - 1333
Alignment:
Q  343 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaac 415  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  1261 ggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 1333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 194021 - 194085
Alignment:
Q  352 accgtccggcgaccccgggcggtcgcccgggctcgatcgataatttgtgcacattagacccaacc 416  Q
    |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| |||||||    
T  194021 accgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaacc 194085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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