View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14695_low_13 (Length: 375)
Name: NF14695_low_13
Description: NF14695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14695_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 40597336 - 40597683
Alignment:
| Q |
16 |
gtttataggtgtagagtgtagtagacaggtgaaacatgtgagtgatcttagaaagagagaaagctagggttacctgtactgtagctttgtgtatggagat |
115 |
Q |
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| T |
40597336 |
gtttataggtgtagagtgtagtagacaggtgaaacatgtgagtgatcttagaaagagagaaagctagggttacctgtactgtagctttgtgtatggagat |
40597435 |
T |
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| Q |
116 |
gcttgcagaccaaacccagcagtagtagagttcgtgtatatgaatacgatgagtagttttcaagaagctagctacatacattatgctacaaccgcaccac |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40597436 |
gcttgcagaccaaacccagcagtagtagagttcgtgtatatgaatatgatgagtagttttcaagaagctagctacatacattatgctacaaccgcaccac |
40597535 |
T |
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| Q |
216 |
acaatcatttattatgatacatccactcataaatcataaataaataatttactaacgtaaaatgaggagcaatataagtcctcaacaacattcaacgctt |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40597536 |
acaatcatttattatgatacatccactcataaatcataaataaataatttactaacgtaaaatgaggagcaatataagtcctcaacaacattcaacgc-- |
40597633 |
T |
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| Q |
316 |
gtgttgtgttgtgtggttgggggccctcctattccaacttccatatttttctt |
368 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
40597634 |
---ttgtgttgtgtggttgggggccctcctattccaccttccatatttttctt |
40597683 |
T |
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