View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14695_low_14 (Length: 373)
Name: NF14695_low_14
Description: NF14695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14695_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 14 - 357
Target Start/End: Original strand, 4474415 - 4474753
Alignment:
| Q |
14 |
gagatgaataggtatgtaaaatatacgaaagggactaaggataagagaattaaagctcttagaatgcttccagcttcgagtgcgacgagcatgtagtatg |
113 |
Q |
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| T |
4474415 |
gagacgaataggtacgtgaaatatacgaaagggactaaggataagagaattaaagctcttagaatgcttccagcttcgagtgcgacgagcatgtagtatg |
4474514 |
T |
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| Q |
114 |
gaaatgcacttcgcgacacgagaagggtgccgtctaagtcggatgccactgtttggtttgatctatcttttgtgctacatttggaaattggtgggaaaag |
213 |
Q |
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| T |
4474515 |
gaaatgcacttcgcgacatgagaagggtgccgtctaagtcggatgccacggtttggtttgatctatcttttgtgctacatttggaaattggtgggaaaag |
4474614 |
T |
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| Q |
214 |
tggaaaggctcccatgacaaagggaggaaannnnnnngaaggaagaaaaatatgagtttaatttgctaagatgttttgtgaggggaatatggaatttggt |
313 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
4474615 |
tggaaaggctcccatgacaaagggaggaaatttttttgaaggaagaaaaatatgag-----tttgctaagatgttttgtgaggggaatatggaatttggt |
4474709 |
T |
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| Q |
314 |
tgagctagctatagagattatagttggctcaaagatgttatgat |
357 |
Q |
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| T |
4474710 |
tgagctagctatagagattatagttggctcaaagatgttatgat |
4474753 |
T |
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