View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14695_low_15 (Length: 362)
Name: NF14695_low_15
Description: NF14695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14695_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 36071326 - 36071669
Alignment:
| Q |
4 |
tttaggaatgaaagtgataatttttctttcactatatgaatgaatgaaagagatccttgccactataatctttagcatggctttatatacttgtccaaag |
103 |
Q |
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|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
36071326 |
tttatgaatgaaagtgataatttttctttgactatatgaatgaatgaaagagatccttggcactataatctttagcatggctttatatacttgtccaaac |
36071425 |
T |
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| Q |
104 |
aaaagcaaatt-aaccctcccacacattgca-atttttacaaggatagaattataga--ctctactataannnnnnngtatggaaaaattgtaagcnnnn |
199 |
Q |
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||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
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| T |
36071426 |
aaaagcaaattaaaccctcccacacattgcatttttttacaaggatagaattatagactctctactataa--tttttgtatggaaaaattgtaagc-ttt |
36071522 |
T |
|
| Q |
200 |
nnnacagaacacaactactcaaaatccaatacattcaaaaattagaattacnnnnnnnctcaaattaactcttcatatttataataaatatctatttgtt |
299 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
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| T |
36071523 |
tttacagaacacaactactcaaaatccaatacatccaaaaattagaatta-aaaaaaactcaaattaactcttcatatttataataaatatctatttctt |
36071621 |
T |
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| Q |
300 |
ttttattctcactactccatgtgagacttgaatgagtatccactttaa |
347 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||| |||| |
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| T |
36071622 |
ttttattctcattactccatgtgagacttgaatgagtatccacattaa |
36071669 |
T |
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