View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14695_low_21 (Length: 331)
Name: NF14695_low_21
Description: NF14695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14695_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 26 - 322
Target Start/End: Complemental strand, 20526464 - 20526168
Alignment:
| Q |
26 |
taagattgcattgaaatcatgtcttgttggtgtttatttattaaactatgccttcaattaacttgatttatgatttacttaatgcaagatttgaatcatg |
125 |
Q |
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| T |
20526464 |
taagattgcattgaaatcatgtcttgttggtgtttatttattaaactatgccttcaattaacttgatttatgatttacttaatgcaagatttgaatcatg |
20526365 |
T |
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| Q |
126 |
attgatagaaaatacatgatgtatataagggataagacgggtttgaactgagattgaattttgattatggatgcttaatttactttcttttgttgtgttt |
225 |
Q |
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| T |
20526364 |
attgatagaaaatacatgatgtatataagggataagacgggtttgaactgagattgaattttgattatggatgcttaatttactttcttttgttgtgttt |
20526265 |
T |
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| Q |
226 |
ttcaggtcttaattaaagatggcaacagaaactttcctatacacatctgaatctgtgaacgagggacaccccgacaagctttgcgaccagatctctg |
322 |
Q |
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| T |
20526264 |
ttcaggtcttaattaaagatggcaacagaaactttcctatacacatctgaatctgtgaacgagggacaccccgacaagctttgcgaccagatctctg |
20526168 |
T |
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Back To:
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Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 45207700 - 45207754
Alignment:
| Q |
268 |
acatctgaatctgtgaacgagggacaccccgacaagctttgcgaccagatctctg |
322 |
Q |
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| T |
45207700 |
acatctgaatcagtgaacgagggtcaccccgacaagctgtgcgaccagatctctg |
45207754 |
T |
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