View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14695_low_32 (Length: 274)

Name: NF14695_low_32
Description: NF14695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14695_low_32
NF14695_low_32
[»] chr4 (41 HSPs)
chr4 (11-225)||(36451260-36451474)
chr4 (11-226)||(25970106-25970316)
chr4 (84-219)||(36450735-36450871)
chr4 (67-212)||(39523161-39523305)
chr4 (77-219)||(25970701-25970844)
chr4 (51-212)||(26611155-26611317)
chr4 (55-222)||(17648021-17648189)
chr4 (51-212)||(10424137-10424299)
chr4 (51-212)||(29651204-29651366)
chr4 (51-212)||(39522389-39522551)
chr4 (59-209)||(21166255-21166406)
chr4 (51-208)||(45235832-45235990)
chr4 (68-212)||(11417701-11417846)
chr4 (51-212)||(26610359-26610522)
chr4 (51-212)||(36864831-36864991)
chr4 (59-212)||(36865598-36865751)
chr4 (51-191)||(45230400-45230541)
chr4 (68-187)||(9939161-9939281)
chr4 (51-210)||(10424931-10425091)
chr4 (51-212)||(29650429-29650590)
chr4 (63-191)||(31835183-31835312)
chr4 (68-212)||(38143626-38143771)
chr4 (51-191)||(21165482-21165623)
chr4 (51-209)||(31836331-31836491)
chr4 (72-227)||(23383309-23383463)
chr4 (98-209)||(9939290-9939402)
chr4 (67-188)||(11806129-11806247)
chr4 (68-212)||(38694840-38694988)
chr4 (108-212)||(11417866-11417971)
chr4 (98-208)||(38143506-38143617)
chr4 (98-188)||(38694740-38694831)
chr4 (97-168)||(5825392-5825459)
chr4 (178-227)||(231435-231484)
chr4 (178-227)||(34155626-34155675)
chr4 (178-226)||(232049-232097)
chr4 (114-182)||(53535835-53535903)
chr4 (177-227)||(20351310-20351360)
chr4 (193-227)||(51412593-51412627)
chr4 (155-228)||(33463675-33463748)
chr4 (157-226)||(38010827-38010896)
chr4 (177-213)||(45330578-45330614)
[»] chr1 (36 HSPs)
chr1 (11-227)||(47334198-47334413)
chr1 (51-212)||(48972317-48972479)
chr1 (77-219)||(47334798-47334941)
chr1 (51-212)||(38930326-38930488)
chr1 (51-212)||(51975099-51975261)
chr1 (70-203)||(12925896-12926028)
chr1 (67-227)||(6075973-6076130)
chr1 (68-212)||(23440631-23440775)
chr1 (51-210)||(16271021-16271180)
chr1 (51-212)||(51974451-51974613)
chr1 (51-219)||(6076740-6076908)
chr1 (51-191)||(9948030-9948171)
chr1 (51-212)||(16270221-16270384)
chr1 (53-191)||(31390701-31390836)
chr1 (70-196)||(17050483-17050608)
chr1 (51-212)||(48971719-48971881)
chr1 (70-203)||(20794312-20794444)
chr1 (68-212)||(43737743-43737888)
chr1 (80-191)||(50826992-50827104)
chr1 (98-212)||(23440784-23440899)
chr1 (51-212)||(38931118-38931281)
chr1 (78-212)||(193864-193997)
chr1 (98-210)||(9948807-9948919)
chr1 (98-212)||(43737897-43738012)
chr1 (127-196)||(40649516-40649585)
chr1 (113-191)||(46133728-46133806)
chr1 (94-226)||(45923047-45923179)
chr1 (177-228)||(48835096-48835147)
chr1 (147-191)||(27888706-27888750)
chr1 (155-226)||(49420932-49421003)
chr1 (160-226)||(31787478-31787544)
chr1 (177-226)||(6766974-6767023)
chr1 (177-226)||(36385668-36385717)
chr1 (180-212)||(11469767-11469799)
chr1 (177-229)||(12926619-12926671)
chr1 (174-226)||(42646034-42646086)
[»] chr6 (16 HSPs)
chr6 (51-212)||(33480500-33480662)
chr6 (51-212)||(22579949-22580111)
chr6 (51-212)||(15082411-15082573)
chr6 (51-212)||(15083190-15083352)
chr6 (68-212)||(3542828-3542973)
chr6 (51-212)||(33479710-33479873)
chr6 (51-212)||(22587182-22587344)
chr6 (68-212)||(33018181-33018326)
chr6 (98-212)||(3542982-3543097)
chr6 (98-212)||(33018335-33018450)
chr6 (88-212)||(7193352-7193474)
chr6 (147-212)||(22582448-22582513)
chr6 (98-202)||(7193497-7193602)
chr6 (180-226)||(8384020-8384066)
chr6 (177-226)||(16766014-16766063)
chr6 (114-182)||(24991360-24991428)
[»] chr5 (21 HSPs)
chr5 (51-212)||(687220-687382)
chr5 (67-212)||(33001946-33002090)
chr5 (51-212)||(33002688-33002850)
chr5 (51-212)||(15183889-15184051)
chr5 (51-212)||(686431-686592)
chr5 (51-182)||(15183133-15183265)
chr5 (28-183)||(42518791-42518947)
chr5 (80-212)||(8204134-8204267)
chr5 (69-182)||(8040239-8040353)
chr5 (113-212)||(12190092-12190192)
chr5 (95-226)||(42650757-42650886)
chr5 (178-228)||(6804889-6804939)
chr5 (153-191)||(33685780-33685818)
chr5 (157-227)||(35263288-35263358)
chr5 (178-227)||(16689592-16689641)
chr5 (177-225)||(4789521-4789569)
chr5 (194-229)||(6803945-6803980)
chr5 (114-212)||(36626565-36626664)
chr5 (177-227)||(1969778-1969828)
chr5 (177-227)||(9923387-9923437)
chr5 (194-226)||(12201377-12201409)
[»] chr3 (30 HSPs)
chr3 (54-212)||(3971006-3971165)
chr3 (70-212)||(36750059-36750201)
chr3 (51-196)||(44686284-44686430)
chr3 (54-212)||(3998716-3998875)
chr3 (72-219)||(45500480-45500626)
chr3 (70-212)||(52492171-52492313)
chr3 (51-212)||(38922757-38922919)
chr3 (51-212)||(38923537-38923699)
chr3 (51-212)||(45242080-45242242)
chr3 (68-212)||(32490084-32490229)
chr3 (51-212)||(45242859-45243021)
chr3 (51-210)||(41756304-41756464)
chr3 (51-186)||(52491926-52492062)
chr3 (59-212)||(36750318-36750471)
chr3 (51-212)||(44687035-44687197)
chr3 (59-187)||(3971782-3971911)
chr3 (51-212)||(41755513-41755675)
chr3 (59-187)||(3997967-3998096)
chr3 (68-212)||(19132701-19132846)
chr3 (87-203)||(8440119-8440234)
chr3 (87-196)||(8436574-8436682)
chr3 (98-212)||(19132577-19132692)
chr3 (72-226)||(8653616-8653768)
chr3 (89-221)||(45501205-45501337)
chr3 (116-227)||(8652809-8652920)
chr3 (98-212)||(32489960-32490075)
chr3 (156-227)||(49160986-49161057)
chr3 (177-226)||(43768758-43768807)
chr3 (177-226)||(45297549-45297598)
chr3 (160-228)||(49161790-49161858)
[»] chr7 (31 HSPs)
chr7 (51-191)||(37864179-37864320)
chr7 (51-210)||(38071914-38072074)
chr7 (70-212)||(38072183-38072325)
chr7 (51-212)||(668193-668355)
chr7 (70-212)||(7677702-7677843)
chr7 (70-210)||(4261221-4261361)
chr7 (51-212)||(668975-669137)
chr7 (51-212)||(7677431-7677593)
chr7 (64-212)||(17145636-17145786)
chr7 (70-210)||(4261487-4261628)
chr7 (70-203)||(32859256-32859388)
chr7 (102-226)||(40257580-40257704)
chr7 (111-212)||(38779496-38779597)
chr7 (94-227)||(42607080-42607213)
chr7 (98-212)||(17145791-17145906)
chr7 (80-196)||(33323807-33323924)
chr7 (95-226)||(36845121-36845250)
chr7 (113-212)||(38778868-38778968)
chr7 (137-220)||(40257761-40257844)
chr7 (152-212)||(37468979-37469039)
chr7 (177-229)||(40320409-40320461)
chr7 (157-227)||(24995851-24995921)
chr7 (178-227)||(30513639-30513688)
chr7 (174-228)||(9091-9145)
chr7 (177-227)||(29060738-29060788)
chr7 (113-227)||(42607748-42607861)
chr7 (185-222)||(46757428-46757465)
chr7 (175-227)||(24307767-24307819)
chr7 (157-213)||(27599224-27599280)
chr7 (68-141)||(41195261-41195329)
chr7 (178-226)||(46756270-46756318)
[»] scaffold0041 (3 HSPs)
scaffold0041 (76-212)||(27235-27370)
scaffold0041 (51-104)||(27485-27538)
scaffold0041 (147-208)||(27544-27605)
[»] chr8 (15 HSPs)
chr8 (70-212)||(5035169-5035310)
chr8 (51-212)||(38023638-38023800)
chr8 (51-212)||(37639725-37639887)
chr8 (51-212)||(41859324-41859486)
chr8 (51-212)||(41859968-41860130)
chr8 (59-191)||(32536743-32536876)
chr8 (68-212)||(34992153-34992298)
chr8 (51-182)||(32537360-32537492)
chr8 (98-212)||(5034912-5035027)
chr8 (98-212)||(34992029-34992144)
chr8 (54-140)||(38024406-38024492)
chr8 (51-119)||(37640469-37640537)
chr8 (113-228)||(35943074-35943189)
chr8 (125-227)||(40450933-40451035)
chr8 (86-142)||(10501822-10501876)
[»] chr2 (19 HSPs)
chr2 (53-212)||(21471828-21471988)
chr2 (51-212)||(21471031-21471193)
chr2 (51-212)||(37548012-37548176)
chr2 (68-191)||(38834422-38834546)
chr2 (78-212)||(4479603-4479736)
chr2 (111-212)||(14573275-14573376)
chr2 (116-227)||(36390956-36391067)
chr2 (113-221)||(36391607-36391715)
chr2 (98-212)||(13134332-13134447)
chr2 (116-212)||(14573936-14574033)
chr2 (231-270)||(34310070-34310109)
chr2 (98-212)||(38834555-38834670)
chr2 (177-226)||(10670941-10670990)
chr2 (156-228)||(23876041-23876113)
chr2 (179-226)||(4993604-4993651)
chr2 (177-227)||(20992018-20992068)
chr2 (194-228)||(24383079-24383113)
chr2 (68-141)||(4478936-4479004)
chr2 (156-196)||(5142532-5142572)
[»] scaffold0311 (1 HSPs)
scaffold0311 (51-212)||(31-194)
[»] scaffold0332 (1 HSPs)
scaffold0332 (83-208)||(9162-9288)
[»] scaffold0700 (1 HSPs)
scaffold0700 (59-182)||(5363-5483)
[»] scaffold0150 (1 HSPs)
scaffold0150 (180-226)||(14012-14058)
[»] scaffold2003 (1 HSPs)
scaffold2003 (178-227)||(531-580)
[»] scaffold0129 (1 HSPs)
scaffold0129 (194-226)||(43234-43266)


Alignment Details
Target: chr4 (Bit Score: 179; Significance: 1e-96; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 36451260 - 36451474
Alignment:
Q  11 gcaacatggtggtgtgtggtggttgctgaatctgatatagtagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  36451260 gcaacatggtggtgtgtggtggttgctgaatctgatatagtggtggttgtggtatgagtatgtggggacatgaaagagagatggtggaagatagtgtaaa 36451359  T
Q  111 ataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  36451360 acaataatctagtgttgagagagtaggataaggatttgtttttcatttaatctaatggacataatcaacttttccatggtgagaaacaactcctctttcc 36451459  T
Q  211 catactaaaccccac 225  Q
    ||| |||||||||||    
T  36451460 catgctaaaccccac 36451474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 25970316 - 25970106
Alignment:
Q  11 gcaacatggtggtgtgtggtggttgctgaatctgatatagtagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  25970316 gcaacatggtggtgtgtggtggttgctgaatctgatatagtggtggttgtggtatgagtgtgtggg-acatgaaagagagatggtggaagatagtgtaaa 25970218  T
Q  111 ataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    | ||||||||||   |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||    
T  25970217 acaataatctag---tgagagagtatgataaagatttgtttctcatttaatctaatggacat-atcaactttcccatggtgggaaacaactcccctttcc 25970122  T
Q  211 catactaaaccccacc 226  Q
    ||| ||||||||||||    
T  25970121 catgctaaaccccacc 25970106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 36450871 - 36450735
Alignment:
Q  84 aagagagagggtggaagatagtgtaaaataataatctagtgt-tgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttt 182  Q
    |||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  36450871 aagagagatggtggaagatagtgtaaaacaacaatctagtgtatgagagagtaggataaagatttgttactcatttaatccaatggacataatcaacttt 36450772  T
Q  183 tccatggtgaaaaacaactcccctttcccatactaaa 219  Q
     |||||||| ||||||||||||||||||||| |||||    
T  36450771 cccatggtggaaaacaactcccctttcccatgctaaa 36450735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 67 - 212
Target Start/End: Original strand, 39523161 - 39523305
Alignment:
Q  67 agtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | ||| ||| | || |||||||||||||||    
T  39523161 agtgtgtgagaacatgaaagagagagggtggaagatagtgtaaaa-aataatttagtgttgagagagtatggtaaagatgtattcctcatttaatctaat 39523259  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||| ||||||||| |||||||| |||| ||||| |||||||||    
T  39523260 ggacatgatcaactttcccatggtggaaaagaactctcctttccca 39523305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 77 - 219
Target Start/End: Original strand, 25970701 - 25970844
Alignment:
Q  77 aacatgaaagagagagggtggaagatagtgtaaaataataatctagtgt-tgagagagtaggataaggatttgtttctcatttaatctaatggacataat 175  Q
    |||| |||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||| ||||||||||  ||||||||||||    
T  25970701 aacaagaaagagagatggtggaagatagtgtaaaacaacaatctagtgtatgagagagtaggataaagatttgttactcatttaattcaatggacataat 25970800  T
Q  176 caacttttccatggtgaaaaacaactcccctttcccatactaaa 219  Q
    |||||||  |||||||  ||||||||||| ||||||||||||||    
T  25970801 caactttctcatggtgggaaacaactcccttttcccatactaaa 25970844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 26611155 - 26611317
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||||||||||||| ||||||||||||||| ||  |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  26611155 tagtggtggtggtatgagtgtgtggggacatgaaagagagagtgtaaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 26611254  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  26611255 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttccca 26611317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 17648021 - 17648189
Alignment:
Q  55 ggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctc 154  Q
    ||||||| |||  ||||||||| |||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||| |||| |||||     
T  17648021 ggttgtgatataggtgtgtggggacatgaaagagagaggatggaagatagtgtaaaacaataatatagtgttgagagagtaagataagaatttatttctt 17648120  T
Q  155 atttaatctaatggacataatcaacttttccatggt-gaaaaacaactcccctttcccatactaaaccc 222  Q
    ||||||||||||||| ||||||||||||  ||| || |||||| |||||| ||  ||||| ||||||||    
T  17648121 atttaatctaatggatataatcaactttcacatagtggaaaaaaaactccactaacccatgctaaaccc 17648189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 10424299 - 10424137
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| ||||   || |||    
T  10424299 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgt 10424200  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| | ||||||  ||| ||||| |||||||||    
T  10424199 tcctcatttaatctaatggacatgatcaactttcctatggtgggaaagaactctcctttccca 10424137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 29651204 - 29651366
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  29651204 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 29651303  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||| || || ||||||||| ||||||||  ||| ||||| |||||||||    
T  29651304 tcctcatttaatctaatagatatgatcaactttcccatggtgggaaagaactctcctttccca 29651366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 39522551 - 39522389
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||| ||| | | |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||    
T  39522551 tagtggtggtggtatgggtgtgtggggacatgaaagagggagtgcgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 39522452  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||||||||||||||||| || ||||||||| ||||||||||||| ||||  |||||||||    
T  39522451 tcctcatttaatctaatggatatgatcaactttcccatggtgaaaaagaactatcctttccca 39522389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 21166255 - 21166406
Alignment:
Q  59 gtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgtttctcatt 157  Q
    |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||| ||||||    
T  21166255 gtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatt 21166354  T
Q  158 taatctaatggacataatcaacttttccatggtgaaaaacaactcccctttc 209  Q
    ||||||||||||||| ||||||||| ||||| ||  ||| ||||| ||||||    
T  21166355 taatctaatggacatgatcaactttcccatgatgggaaagaactctcctttc 21166406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 45235832 - 45235990
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    |||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| ||||||||| || ||||   || |||    
T  45235832 tagtggttgtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagaatatgatagaaatatgt 45235931  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactccccttt 208  Q
    | ||||||||||||||||||||| || |||||| ||||||||  ||| ||||| |||||    
T  45235932 tcctcatttaatctaatggacatgattaactttcccatggtgggaaagaactctccttt 45235990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 11417846 - 11417701
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| ||||||||||||||| ||| |||||||| |||||  ||||||||||| ||||||||||| |||| | || |||| |||||||||||||||    
T  11417846 gtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaatataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaat 11417747  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  11417746 ggacatgatcaactttcccatggtgggaaagaactctcctttccca 11417701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 26610522 - 26610359
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataa-taatctagtg-ttgagagagtaggataaggatttg 148  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| || |||||||||| ||||||||||| |||| | || ||    
T  26610522 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatg 26610423  T
Q  149 tttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    || ||||||||||||||||||||| ||||| ||| ||||||||  ||| ||||| | |||||||    
T  26610422 ttcctcatttaatctaatggacatgatcaattttcccatggtgggaaagaactctcatttccca 26610359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 36864991 - 36864831
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| | ||||||| |||||||||||||    || |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||    
T  36864991 tagtggtggtggtatgggagtgtggggacatgaaagagagta--tgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 36864894  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||||||||||||||||||| |||||||||  |||||||| ||| ||||| |||||||||    
T  36864893 ttctcatttaatctaatggacatgatcaactttctcatggtgagaaagaactctcctttccca 36864831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 36865598 - 36865751
Alignment:
Q  59 gtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatt 157  Q
    |||||||| ||||||||| ||||||||||||||| ||  |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||| ||||||    
T  36865598 gtggtatg-gtgtgtggggacatgaaagagagagtgtaaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatt 36865696  T
Q  158 taatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||||||||| || ||||||||| ||||||||  ||| ||||| |||||||||    
T  36865697 taatctaatggatatgatcaactttcccatggtgggaaagaactctcctttccca 36865751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 45230541 - 45230400
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| || ||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  45230541 tagtggtggtcgtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 45230442  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtg 191  Q
    | |||||||||||||||| | || ||||||||| ||||||||    
T  45230441 tcctcatttaatctaatgaatatgatcaactttcccatggtg 45230400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 9939281 - 9939161
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| | ||||||||||||  ||| |||||||| ||||| |||||||||||| ||||||||||| |||||| || ||||||||||||||||||||    
T  9939281 gtgtgtggggatatgaaagagagaatgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataagaatatgtttctcatttaatctaat 9939182  T
Q  167 ggacataatcaacttttccat 187  Q
    |||||| ||||||||| ||||    
T  9939181 ggacatgatcaactttcccat 9939161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 210
Target Start/End: Original strand, 10424931 - 10425091
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||| ||| |||||| | ||||| ||||||||||| |||||||||||| |||| | || | |    
T  10424931 tagtggtggtggtatgggtgtgaggggacatgaaagagagagtgtgaaagataatataaaaaaataatctagtggttgagagagtatgataggaatatat 10425030  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    | |||||||||||||||||| || ||||||||| ||||||||  ||| ||||| |||||||    
T  10425031 tcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcc 10425091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 29650590 - 29650429
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| || ||||| ||||||||| |||||||| |||||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||    
T  29650590 tagtggtggttgtatg-gtgtgtggggacatgaaaaagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 29650492  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| ||| | || |||| ||||| | |||||||    
T  29650491 tcctcatttaatctaatggacatgatcaactttcccaagatggaaaagaactctcatttccca 29650429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 31835312 - 31835183
Alignment:
Q  63 tatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaat 161  Q
    |||| ||||||||| ||||||||||||||| ||| |||||||| |||||  ||||||||||| ||||||||||| |||| | || |||| ||| ||||||    
T  31835312 tatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaagataatctagtggttgagagagtatgataggaatatgttcctcgtttaat 31835213  T
Q  162 ctaatggacataatcaacttttccatggtg 191  Q
    ||||||||||||||||||||| | ||||||    
T  31835212 ctaatggacataatcaactttcctatggtg 31835183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 38143626 - 38143771
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||| | ||||||||||||||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||| |||||||||||||||    
T  38143626 gtgtgtgaggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaat 38143725  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||| | ||||||| ||||||||  ||| ||||| | |||||||    
T  38143726 ggacatgaccaactttcccatggtgggaaagaactctcatttccca 38143771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 21165623 - 21165482
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||  ||| |||||||| ||||| | ||||||||| |||||||||||| ||||   || |||    
T  21165623 tagtggtggtggtatgggtgtgtggggacatgaaagagagactgtgaaagatagtataaaaaattaatctagtggttgagagagtatgatagaaatatgt 21165524  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtg 191  Q
    | ||||||||||| ||||||||| |||||||||  |||||||    
T  21165523 tcctcatttaatcaaatggacatgatcaactttctcatggtg 21165482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 31836331 - 31836491
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataa-taatctagtg-ttgagagagtaggataaggatttg 148  Q
    ||||||| |||||||| |||||||||  ||| |||||||||| ||| |||||| | ||||| || |||||||||| ||||||||||| ||||   || ||    
T  31836331 tagtggtggtggtatgggtgtgtgggggcataaaagagagagtgtgaaagataatataaaaaaaataatctagtggttgagagagtatgatagaaatatg 31836430  T
Q  149 tttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttc 209  Q
    || ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| ||||||    
T  31836431 ttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttc 31836491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 23383463 - 23383309
Alignment:
Q  72 gtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggaca 171  Q
    ||||| ||||| |||||||||||||||||||||||||||| | ||||||||| ||||  ||||| ||||||  | ||||  |||||| ||| |||||| |    
T  23383463 gtggggacatggaagagagagggtggaagatagtgtaaaa-attaatctagtattgatggagtatgataagagtgtgttcttcatttgatcgaatggata 23383365  T
Q  172 taatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
     ||| |||||| ||||||||  ||||||||| |||||| ||| |||||||||||||    
T  23383364 aaattaactttcccatggtgggaaacaactctcctttctcattctaaaccccacct 23383309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 9939290 - 9939402
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||| | ||||| |||||| ||||| ||||||||||| |||| | || |||| ||||||||||||||||||||| ||||||||||||||||||  |||    
T  9939290 aagataatataaaaaaataatatagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaa 9939389  T
Q  197 caactcccctttc 209  Q
     ||||||||||||    
T  9939390 gaactcccctttc 9939402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 11806247 - 11806129
Alignment:
Q  67 agtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    |||||||| |||||||||||||||||  || |  ||| ||||||| ||||| |||||||||||||||||||||||  || |||| |||||||||||||||    
T  11806247 agtgtgtgagaacatgaaagagagag--tgaataataatgtaaaa-aataaactagtgttgagagagtaggataaaaatgtgttcctcatttaatctaat 11806151  T
Q  167 ggacataatcaacttttccatg 188  Q
    |||||| || |||||| |||||    
T  11806150 ggacatgattaactttcccatg 11806129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 38694840 - 38694988
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtg---taaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatct 163  Q
    ||||||||| ||||||||||||||| ||| ||||||||    ||||| |||||||||||| ||||||||||| |||| | || | || ||||||||||||    
T  38694840 gtgtgtggggacatgaaagagagagtgtgaaagatagtagtataaaaaaataatctagtggttgagagagtatgatatgaatattttcctcatttaatct 38694939  T
Q  164 aatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||| ||||| |||||||||  |||||||  ||| ||||| |||||||||    
T  38694940 aatagacatgatcaactttctcatggtgggaaagaactctcctttccca 38694988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 11417866 - 11417971
Alignment:
Q  108 aaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccct 206  Q
    |||| |||||||||||| ||||||||||| |||| | || |||| ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||    
T  11417866 aaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcct 11417965  T
Q  207 ttccca 212  Q
    ||||||    
T  11417966 ttccca 11417971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 208
Target Start/End: Complemental strand, 38143617 - 38143506
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||| | ||||| |||||||||||| ||||||||||| |||| | || |||| ||||||||||||||||||||| ||||||||| | |||||| ||||    
T  38143617 aagataatataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcctatggtggaaaa 38143518  T
Q  197 caactccccttt 208  Q
     ||||| |||||    
T  38143517 gaactctccttt 38143506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 38694831 - 38694740
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatg 188  Q
    |||||| | ||||| |||||||||||| ||||||||||| |||| | || |||| |||||||||||||||| | || |||||||||||||||    
T  38694831 aagataatataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatcaacttttccatg 38694740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 5825459 - 5825392
Alignment:
Q  97 gaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatgg 168  Q
    |||||||||||||||    ||||||||||||||||||||||||||  || |||| ||||||| |||||||||    
T  5825459 gaagatagtgtaaaa----aatctagtgttgagagagtaggataataatgtgttcctcatttgatctaatgg 5825392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 231484 - 231435
Alignment:
Q  178 acttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    ||||| |||||||  ||||||||| |||||||||||||||||||||||||    
T  231484 actttcccatggtagaaaacaacttccctttcccatactaaaccccacct 231435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 34155626 - 34155675
Alignment:
Q  178 acttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    |||||||||||||| ||||||| | ||||||||||| |||||||||||||    
T  34155626 acttttccatggtggaaaacaagttccctttcccatgctaaaccccacct 34155675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 232049 - 232097
Alignment:
Q  178 acttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    ||||| ||||||||  |||||||| ||||||||||||||||||||||||    
T  232049 actttcccatggtgggaaacaacttccctttcccatactaaaccccacc 232097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 53535835 - 53535903
Alignment:
Q  114 ataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttt 182  Q
    ||||||||||||| || ||||| |||||  || | ||| ||||||||||||||||| ||||||||||||    
T  53535835 ataatctagtgttaagtgagtaagataacaatatatttttcatttaatctaatggatataatcaacttt 53535903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 20351310 - 20351360
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    ||||||| |||||||  ||||||||| || |||||||||||||||||||||    
T  20351310 aactttttcatggtgggaaacaactctccattcccatactaaaccccacct 20351360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 51412627 - 51412593
Alignment:
Q  193 aaaacaactcccctttcccatactaaaccccacct 227  Q
    ||||||||| |||||||||||||||||||||||||    
T  51412627 aaaacaacttccctttcccatactaaaccccacct 51412593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 33463748 - 33463675
Alignment:
Q  155 atttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacctt 228  Q
    |||||||| ||||| || |||||| ||| ||||  || ||||||| | ||||||||||| ||||||||||||||    
T  33463748 atttaatcaaatggccaaaatcaattttcccatcatggaaaacaaattccctttcccattctaaaccccacctt 33463675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 38010827 - 38010896
Alignment:
Q  157 ttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    ||||||||||||||| || ||||||| ||||| || ||||||| |  |||||||||| ||||||| ||||    
T  38010827 ttaatctaatggacaaaaacaactttcccatgatggaaaacaaatatcctttcccatgctaaacctcacc 38010896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 45330614 - 45330578
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccat 213  Q
    |||||||||||||||  ||||||||||||||||||||    
T  45330614 aacttttccatggtgggaaacaactcccctttcccat 45330578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 3e-88; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 47334413 - 47334198
Alignment:
Q  11 gcaacatggtggtgtgtggtggttgctgaatctgatatagtagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaa 110  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  47334413 gcaacatggtggtgtgtggtggttgctgtatctgatatagtggtggttgtggtatgagtgtgtggga-catgaaagagagatggtggaagatagtgtaaa 47334315  T
Q  111 ataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||  ||||||||||||||| |    
T  47334314 acaataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaactttcccattgtgggaaacaactccccttttc 47334215  T
Q  211 catactaaaccccacct 227  Q
    ||  |||||||||||||    
T  47334214 caggctaaaccccacct 47334198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 48972317 - 48972479
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| | ||||||||||||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||    
T  48972317 tagtggtggtggtatgggtgtgtggggatatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 48972416  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||| ||||| |||||||||    
T  48972417 ttctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttccca 48972479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 219
Target Start/End: Original strand, 47334798 - 47334941
Alignment:
Q  77 aacatgaaagagagagggtggaagatagtgtaaaataataatctagtgt-tgagagagtaggataaggatttgtttctcatttaatctaatggacataat 175  Q
    |||| |||||||||| ||||||||||||||||||| ||  || |||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  47334798 aacaagaaagagagatggtggaagatagtgtaaaacaacgatatagtgtatgagagagtaggataaagatttgttactcatttaatccaatggacataat 47334897  T
Q  176 caacttttccatggtgaaaaacaactcccctttcccatactaaa 219  Q
    ||||||| | ||||||  ||||||||||| ||||||||||||||    
T  47334898 caactttcctatggtgggaaacaactcccttttcccatactaaa 47334941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 38930488 - 38930326
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  38930488 tagtggtggtggtatgggtgtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 38930389  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | || ||||||| ||||||| || ||||||||| ||||||||||||| ||||  |||||||||    
T  38930388 tccttatttaatttaatggatatgatcaactttcccatggtgaaaaagaactttcctttccca 38930326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 51975099 - 51975261
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| ||| |||||||| |||| | || |||    
T  51975099 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttaagagagtatgataggaatatgt 51975198  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||| ||||| ||||||||| |||| |||||||| ||||| |||||||||    
T  51975199 tcctcatttaatctaattgacatgatcaactttcccatagtgaaaaagaactctcctttccca 51975261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 12926028 - 12925896
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatgga 169  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| || | || | ||||||||||||||||    
T  12926028 gtgtggggacatgaaagagagagggtggaagatagtgtaaaa-aataatctaatgttgagagagtagtataagaatgtattccacatttaatctaatgga 12925930  T
Q  170 cataatcaacttttccatggtgaaaaacaactcc 203  Q
    ||| ||||||||||| |||||| |||| ||||||    
T  12925929 cattatcaacttttctatggtggaaaaaaactcc 12925896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 6076130 - 6075973
Alignment:
Q  67 agtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    |||||||| |||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||| || |||||  || | || |||||||||||||||    
T  6076130 agtgtgtgagaacatgaaagagagag--tggaagatagtgtaaaa-aataatttagtgttgagagactatgataaaaatgtattcctcatttaatctaat 6076034  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    |||||| |||||||||  ||||||  |||| ||||| |||||||||||||||||| |||||    
T  6076033 ggacatgatcaactttctcatggtagaaaagaactctcctttcccatactaaacctcacct 6075973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 23440775 - 23440631
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| ||||||||||||||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||| | || ||||||||||||||||||||    
T  23440775 gtgtgtggggacatgaaagagagagtgtgaaagatagtataaaa-aataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaat 23440677  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||||||||||||||||| ||   ||| ||||| |||||||||    
T  23440676 ggacataatcaacttttccatagttggaaagaactctcctttccca 23440631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 210
Target Start/End: Original strand, 16271021 - 16271180
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| || ||||| ||||| |||||||||||| ||||||||||| |||| | || |||    
T  16271021 tagtggtggtggtatg-gtgtgtggggacatgaaagagagagtgtgaaatatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 16271119  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    | ||||||||||||||||||||| ||||||||| ||||| ||| ||| ||||| |||||||    
T  16271120 tcctcatttaatctaatggacatgatcaactttcccatgatgagaaagaactctcctttcc 16271180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 51974613 - 51974451
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||  ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  51974613 tagtggtggtggtatgggtgtgtggggacatgaaagagagaatgtgaaagatagtataaaaaaataatctagtagttgagagagtatgataggaatatgt 51974514  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |  |||||||||||||| ||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  51974513 tcttcatttaatctaatagacatgatcaactttcccatggtgggaaagaactctcctttccca 51974451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 219
Target Start/End: Original strand, 6076740 - 6076908
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||| || ||||||||||| |||| | || |||    
T  6076740 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaa-aataatctattggttgagagagtatgataggaatatgt 6076838  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaa 219  Q
    | |||||||||| |||||||||| |||||||||||||| |||  ||| ||||| | |||||||| |||||    
T  6076839 tactcatttaatataatggacatgatcaacttttccatagtgggaaagaactctcatttcccatgctaaa 6076908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 9948171 - 9948030
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||  ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  9948171 tagtggtggtggtataggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 9948072  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtg 191  Q
    | |||||||||||||||| | || ||||||||||||||||||    
T  9948071 tcctcatttaatctaatgaatatgatcaacttttccatggtg 9948030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 16270384 - 16270221
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataa-taatctagtg-ttgagagagtaggataaggatttg 148  Q
    ||||||| |||||||| |||||| || ||||||||||| ||| ||| |||||||| ||||| || |||||||||| ||||||||||| |||| | || ||    
T  16270384 tagtggtggtggtatgggtgtgtagggacatgaaagagggagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatg 16270285  T
Q  149 tttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    || ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  16270284 ttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 16270221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 191
Target Start/End: Original strand, 31390701 - 31390836
Alignment:
Q  53 gtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttc 152  Q
    ||||| ||||| || ||||||||| |||||||||||||||  || |||||||||||||| ||||||||| |||||||||||||||||||  || |||| |    
T  31390701 gtggtggtggtgtgggtgtgtggggacatgaaagagagag--tgaaagatagtgtaaaa-aataatctaatgttgagagagtaggataaaaatgtgttcc 31390797  T
Q  153 tcatttaatctaatggacataatcaacttttccatggtg 191  Q
    ||||||| || ||||||||||||||||||| ||||||||    
T  31390798 tcatttattccaatggacataatcaactttcccatggtg 31390836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 17050608 - 17050483
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatgga 169  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| ||||| || |||  |  ||||||||||||| |    
T  17050608 gtgtggggacatgaaagagagagggtggaagatagtgtaaaa-aataatctaatattgagagagtagtataagaatgtgtaccatatttaatctaatgaa 17050510  T
Q  170 cataatcaacttttccatggtgaaaaa 196  Q
    ||| ||||||||| |||||||||||||    
T  17050509 cattatcaactttcccatggtgaaaaa 17050483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 48971881 - 48971719
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||| |||||||| ||||| |||||| |||| |||||||||||| |||| | || |||    
T  48971881 tagtggtggtggtatgggtgtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaataatatagtggttgagagagtatgataggaatatgt 48971782  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||||||||||||||  | || |||||||||  ||| |||  ||| ||||| |||||||||    
T  48971781 tcctcatttaatctaatttatatgatcaactttctcattgtgggaaagaactctcctttccca 48971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 20794444 - 20794312
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatgga 169  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||   ||||| || |||| | |||||||||||||| |    
T  20794444 gtgtggggacatgaaagagagagggtggaaaatagtgtaaaa-aataatctaatgttgagagagtgatataagaatgtgttccacatttaatctaatgca 20794346  T
Q  170 cataatcaacttttccatggtgaaaaacaactcc 203  Q
    ||| ||||||||| | |||||| |||| ||||||    
T  20794345 cattatcaactttcctatggtggaaaaaaactcc 20794312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 43737888 - 43737743
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| |||| |||||||||  ||| |||||||||||||| |||||||||||| ||||||||||| |||||  || | || |||||||||||||||    
T  43737888 gtgtgtggggacatcaaagagagaatgtgaaagatagtgtaaaaaaataatctagtggttgagagagtatgataaaaatatattcctcatttaatctaat 43737789  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||| ||||||||| ||||||||  ||| |||||  ||||||||    
T  43737788 ggacatgatcaactttcccatggtgggaaataactctactttccca 43737743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 80 - 191
Target Start/End: Original strand, 50826992 - 50827104
Alignment:
Q  80 atgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaa 178  Q
    ||||||||||||| ||| |||||| | ||||| |||||| ||||| ||||||||||| |||||  || |||||||||||||||||||||||||| |||||    
T  50826992 atgaaagagagagtgtgaaagatactataaaaaaataatttagtggttgagagagtatgataaaaatatgtttctcatttaatctaatggacatgatcaa 50827091  T
Q  179 cttttccatggtg 191  Q
    |||| ||||||||    
T  50827092 ctttcccatggtg 50827104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 23440784 - 23440899
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||||| ||||| |||||||||||| ||||||||||| |||| | || | || ||||||||||||||||||||| ||||||||| ||||||||  |||    
T  23440784 aagatagtataaaaaaataatctagtggttgagagagtatgataggaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaa 23440883  T
Q  197 caactcccctttccca 212  Q
     ||||| |||||||||    
T  23440884 gaactctcctttccca 23440899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 38931118 - 38931281
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgt-aaaataataatctagt-gttgagagagtaggataaggatttg 148  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||| | | |||| |||||| |||| |||||||||||| ||||   || ||    
T  38931118 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagataatataaaaaaaataatatagtggttgagagagtatgatagaaatatg 38931217  T
Q  149 tttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||| ||||||| ||||||| || ||||||||| |||||||  |||| |||||  ||||||||    
T  38931218 tttcttatttaatttaatggatatgatcaactttcccatggtagaaaagaactcttctttccca 38931281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 212
Target Start/End: Complemental strand, 193997 - 193864
Alignment:
Q  78 acatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatca 177  Q
    |||||||||||||| | || |||||| | ||||| ||||||||||||| ||||||||| |||||| || |||| |||||||||| |||||||||| || |    
T  193997 acatgaaagagagatgatgaaagataatataaaa-aataatctagtgtggagagagtatgataagaatatgttcctcatttaatttaatggacatgatta 193899  T
Q  178 acttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||  |||||||  ||| ||||| |||||||||    
T  193898 actttctcatggtgggaaagaactctcctttccca 193864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 210
Target Start/End: Original strand, 9948807 - 9948919
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||||| ||||| |||||||||||| |||| |||||| |||| | || |||| ||||||||||||||||||||| ||||||||| ||||||||  |||    
T  9948807 aagatagtataaaa-aataatctagtggttgatagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaa 9948905  T
Q  197 caactcccctttcc 210  Q
     ||||| |||||||    
T  9948906 gaactctcctttcc 9948919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 43737897 - 43738012
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||| | ||||| |||||||||||| |||||||| || |||| | || |||| ||||||||||||||||||||| ||||||||| ||||| ||  |||    
T  43737897 aagataatataaaaaaataatctagtggttgagagaatatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaa 43737996  T
Q  197 caactcccctttccca 212  Q
     ||||| |||||||||    
T  43737997 gaactctcctttccca 43738012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 40649516 - 40649585
Alignment:
Q  127 gagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||||||| ||||| || |||| | ||||||||||||||||||| ||||||||| |||||||||||||    
T  40649516 gagagagtagtataagaatgtgttccacatttaatctaatggacattatcaactttcccatggtgaaaaa 40649585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 46133806 - 46133728
Alignment:
Q  113 aataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtg 191  Q
    ||||||||| |||||||||||||| ||||| || || | |||||||||||| |||||||||||  ||||| ||||||||    
T  46133806 aataatctaatgttgagagagtagtataagaatgtgctcctcatttaatctgatggacataattcactttcccatggtg 46133728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 226
Target Start/End: Original strand, 45923047 - 45923179
Alignment:
Q  94 gtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaa 193  Q
    ||||||||||  | |||| ||||||| |||||||| |||  | ||||||  | |||||||  ||| |||||||||||| ||  ||||||||||||||| |    
T  45923047 gtggaagataaagcaaaaaaataatcaagtgttgatagaccatgataagattgtgtttcttgtttgatctaatggacaaaaaaaacttttccatggtgga 45923146  T
Q  194 aaacaactcccctttcccatactaaaccccacc 226  Q
    |||||| | |||| |||||| ||||||| ||||    
T  45923147 aaacaatttccctatcccatgctaaacctcacc 45923179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 48835096 - 48835147
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacctt 228  Q
    |||||| |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  48835096 aactttcccatggtggaaaacaattcccctttcccatgctaaaccccacctt 48835147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 27888750 - 27888706
Alignment:
Q  147 tgtttctcatttaatctaatggacataatcaacttttccatggtg 191  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||    
T  27888750 tgttcctcatttaatctaatggacatgatcaactttcccatggtg 27888706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 49420932 - 49421003
Alignment:
Q  155 atttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    |||||||| |||||  | |||||||||||||||  ||  |||||||| ||||||||||||||||||| ||||    
T  49420932 atttaatcaaatggctaaaatcaacttttccatcatgggaaacaacttccctttcccatactaaacctcacc 49421003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 31787544 - 31787478
Alignment:
Q  160 atctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    ||||||||| || ||| | |||||||||||||  |||||||| ||| |||||||||||||| |||||    
T  31787544 atctaatggtcaaaattagcttttccatggtgggaaacaacttcccattcccatactaaacgccacc 31787478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 6767023 - 6766974
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    |||||||||||| || ||||||| |||||||| ||||||||||| |||||    
T  6767023 aacttttccatgatggaaaacaattccccttttccatactaaactccacc 6766974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 36385717 - 36385668
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    |||||| ||||| || ||||||||| |||||| |||||||||||||||||    
T  36385717 aactttcccatgatggaaaacaacttcccttttccatactaaaccccacc 36385668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 11469767 - 11469799
Alignment:
Q  180 ttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||||||||||||||||||| ||||||||||    
T  11469767 ttttccatggtgaaaaacaacttccctttccca 11469799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 12926619 - 12926671
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccaccttg 229  Q
    ||||||| |||||||  ||| |||||| ||| |||||||||||||||||||||    
T  12926619 aactttttcatggtgggaaaaaactccacttacccatactaaaccccaccttg 12926671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 42646034 - 42646086
Alignment:
Q  174 atcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    ||||||||| ||||  || ||||| ||| ||||||||||||||||||||||||    
T  42646034 atcaactttcccattatggaaaactacttccctttcccatactaaaccccacc 42646086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 9e-42; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 33480500 - 33480662
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  33480500 tagtggtggtggtatgggtgtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 33480599  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  33480600 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 33480662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 22580111 - 22579949
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| ||| |||| |||||| || ||||||||||||||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||    
T  22580111 tagtggtggtgatatgggtgtgtagggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtgattgagagagtatgataggaatatgt 22580012  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||||||||||||||||| || ||||||||| |||||||| |||| ||||| |||||||||    
T  22580011 tcctcatttaatctaatggatatgatcaactttcccatggtggaaaagaactctcctttccca 22579949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 15082573 - 15082411
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| || ||||| |||||| || ||||||||||||||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||    
T  15082573 tagtggtggttgtatgggtgtgtagggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 15082474  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| ||||| || |||| ||||| | |||||||    
T  15082473 tcctcatttaatctaatggacatgatcaactttcccatgatggaaaagaactctcatttccca 15082411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 15083190 - 15083352
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  15083190 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 15083289  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||| || || |||||||||  |||||||  ||| ||||| |||||||||    
T  15083290 tcctcatttaatctaatagatatgatcaactttctcatggtgggaaagaactctcctttccca 15083352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 3542973 - 3542828
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| ||||||||||||||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||| |||||||||||||||    
T  3542973 gtgtgtggggacatgaaagagagagtgtgaaagatagtttaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaat 3542874  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  3542873 gaacatgatcaactttcccatggtgggaaaaaactctcctttccca 3542828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 33479873 - 33479710
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataa-taatctagtg-ttgagagagtaggataaggatttg 148  Q
    ||||||| |||||||| ||||||||| |||||||| |||||| ||| |||||||| ||||| || |||||||||| ||||||||||| ||||   || ||    
T  33479873 tagtggtggtggtatgggtgtgtggggacatgaaatagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgatagaaatatg 33479774  T
Q  149 tttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    || ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  33479773 ttcctcatttaatctaatggacatgatcaactttcccatggtgggaaataactctcctttccca 33479710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 22587182 - 22587344
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||| ||||||||||| ||| |||||||| ||||| |||||||||||| ||||| |||||  |||   || |||    
T  22587182 tagtggtggtggtatgggtgtgtggggacaggaaagagagagtgtgaaagatagtataaaaaaataatctagtgattgagtgagtataatagaaatatgt 22587281  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  22587282 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 22587344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 33018326 - 33018181
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||| || ||||||||||| |||||  || |||| |||||||||||||||    
T  33018326 gtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgataaaaatatgttcctcatttaatctaat 33018227  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||| ||||||||| | ||| ||  ||| ||||| |||||||||    
T  33018226 ggacatgatcaactttccaatgatgggaaagaactctcctttccca 33018181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 3542982 - 3543097
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||| | ||||| |||||||||||| ||||||||||| |||| | || |||| ||||||||||||||||||||| ||||||||| ||||||||  |||    
T  3542982 aagataatataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaa 3543081  T
Q  197 caactcccctttccca 212  Q
     ||||| |||||||||    
T  3543082 aaactctcctttccca 3543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 33018335 - 33018450
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||||| ||||| |||||||||||| ||||||||||| ||||   || |||| ||||||||||||||||||||| ||||||||| ||||||||  |||    
T  33018335 aagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaa 33018434  T
Q  197 caactcccctttccca 212  Q
     ||||| |||||||||    
T  33018435 gaactctcctttccca 33018450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 7193474 - 7193352
Alignment:
Q  88 gagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccat 187  Q
    ||||| ||| |||||||| ||||| |||||||| ||  |||||||||| |||||| || |||| |||||||||||||||||| || ||||||||| ||||    
T  7193474 gagagtgtgaaagatagtataaaaaaataatctggt--tgagagagtatgataagaatatgttcctcatttaatctaatggagatgatcaactttcccat 7193377  T
Q  188 ggtgaaaaacaactcccctttccca 212  Q
    ||||  ||| ||||| |||||||||    
T  7193376 ggtgggaaagaactctcctttccca 7193352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 22582448 - 22582513
Alignment:
Q  147 tgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  22582448 tgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 22582513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 7193497 - 7193602
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||| | ||||| |||||||||||| ||||||||||| ||||   || | || |||||||||||||||||| || ||||||||| ||||| || ||||    
T  7193497 aagataatataaaaaaataatctagtggttgagagagtatgatagaaatatattcctcatttaatctaatggatatgatcaactttcccatgatggaaaa 7193596  T
Q  197 caactc 202  Q
     |||||    
T  7193597 gaactc 7193602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 8384020 - 8384066
Alignment:
Q  180 ttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    ||||||||||||  |||||||||| ||||||||| ||||||||||||    
T  8384020 ttttccatggtgggaaacaactccactttcccatgctaaaccccacc 8384066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 16766014 - 16766063
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    ||||||||||||||| |||||||||   ||||||||| ||||||||||||    
T  16766014 aacttttccatggtggaaaacaacttttctttcccatgctaaaccccacc 16766063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 24991428 - 24991360
Alignment:
Q  114 ataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttt 182  Q
    ||||||||||||| || ||||| |||||  || | ||| ||||||||||||||||  ||||||||||||    
T  24991428 ataatctagtgttaagtgagtaagataacaatatatttttcatttaatctaatgggtataatcaacttt 24991360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 9e-42; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 687220 - 687382
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| |||||| ||||| ||||||||||| |||| | || |||    
T  687220 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatttagtgattgagagagtatgataggaatatgt 687319  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||    
T  687320 tcctcatttaatctaatggacataatcaacttttccatagtggaaaagaactctcctttccca 687382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 67 - 212
Target Start/End: Complemental strand, 33002090 - 33001946
Alignment:
Q  67 agtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||| || | || |||||||||||||||    
T  33002090 agtgtgtgagaacatgaaagagagagggtggaagatagtgtaaaa-aataatttagtgttgagagaatatgataagaatgtattcctcatttaatctaat 33001992  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||| ||||||||||||||||||  ||| ||||| |||||||||    
T  33001991 ggacatgatcaacttttccatggtgggaaagaactctcctttccca 33001946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 33002688 - 33002850
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| ||||||||||||| |||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  33002688 tagtggtggtggtatgagtgtttggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 33002787  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  33002788 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 33002850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 15183889 - 15184051
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||  ||||| |||||||||||| ||||||||||| |||| | || |||    
T  15183889 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagcataaaaaaataatctagtggttgagagagtatgataggaatatgt 15183988  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  15183989 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 15184051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 686592 - 686431
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| ||||||||| || |||| | || | |    
T  686592 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagaatatgataggaatatat 686493  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  686492 tcctcatttaatctaatggacatgatcaactttcccatggtgggaaa-aactctcctttccca 686431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 15183265 - 15183133
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||||||| ||||   || |||    
T  15183265 tagtggtggtggtatgggtgtgtggggacatgaaagtgagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgt 15183166  T
Q  150 ttctcatttaatctaatggacataatcaacttt 182  Q
    | ||||||||||||||||||||| |||||||||    
T  15183165 tcctcatttaatctaatggacatgatcaacttt 15183133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 42518947 - 42518791
Alignment:
Q  28 ggtggttgctgaatct--gatatagtagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgt 125  Q
    ||||||||||||||||  ||| |||| |||||||||||||| |||||||   |||||||||||||  |||| || ||||| ||||| |||||| ||||||    
T  42518947 ggtggttgctgaatctatgatttagtggtggttgtggtatgggtgtgtg---acatgaaagagag--ggtgaaaaatagtataaaacaataatttagtgt 42518853  T
Q  126 tgagagagtaggataaggatttgtttctcatttaatctaa----tggacataatcaactttt 183  Q
    ||||| |||| |||||| ||||||||||||||||||||||    ||||||||||||||||||    
T  42518852 tgagatagtacgataagaatttgtttctcatttaatctaatggatggacataatcaactttt 42518791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 80 - 212
Target Start/End: Complemental strand, 8204267 - 8204134
Alignment:
Q  80 atgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaa 178  Q
    ||||||||||||| ||| |||||||| ||||| |||||||||||| |||||| |||| |||| | || |||| ||||||||||||||||||||| |||||    
T  8204267 atgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagatagtatgataggaatatgttcctcatttaatctaatggacatgatcaa 8204168  T
Q  179 cttttccatggtgaaaaacaactcccctttccca 212  Q
    |||| ||||||||  ||| ||||| |||||||||    
T  8204167 ctttcccatggtgggaaagaactctcctttccca 8204134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 8040353 - 8040239
Alignment:
Q  69 tgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatg 167  Q
    ||||| || ||||||||||||||| ||| |||||||| ||||| |||||| ||||| ||||||||||| |||||| || | || ||||||||||||||||    
T  8040353 tgtgtagggacatgaaagagagagtgtgaaagatagtataaaaaaataatgtagtggttgagagagtatgataagaatatattcctcatttaatctaatg 8040254  T
Q  168 gacataatcaacttt 182  Q
    ||||| |||||||||    
T  8040253 gacatgatcaacttt 8040239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 12190092 - 12190192
Alignment:
Q  113 aataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccc 211  Q
    ||||||||| || ||||||||||| ||||   || |||| ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| | ||||||    
T  12190092 aataatctaatgattgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcttttccc 12190191  T
Q  212 a 212  Q
    |    
T  12190192 a 12190192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 226
Target Start/End: Complemental strand, 42650886 - 42650757
Alignment:
Q  95 tggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaa 194  Q
    ||||||||| |||||||  ||||||||||||||| ||| || |||||   | |||| || |  | ||||||||  |||||  |||||| |||||||||||    
T  42650886 tggaagataatgtaaaa--ataatctagtgttgaaagactatgataatattatgttccttacatgatctaatgctcataaaaaactttcccatggtgaaa 42650789  T
Q  195 aacaactcccctttcccatactaaaccccacc 226  Q
    ||||| ||||||||||||| ||||||| ||||    
T  42650788 aacaattcccctttcccatgctaaacctcacc 42650757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 6804939 - 6804889
Alignment:
Q  178 acttttccatggtgaaaaacaactcccctttcccatactaaaccccacctt 228  Q
    ||||||||||||||  |||||||||| ||||||||| ||||||||||||||    
T  6804939 acttttccatggtgggaaacaactcctctttcccatgctaaaccccacctt 6804889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 33685818 - 33685780
Alignment:
Q  153 tcatttaatctaatggacataatcaacttttccatggtg 191  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  33685818 tcatttaatctaatggacataatcaacttttacatggtg 33685780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 35263288 - 35263358
Alignment:
Q  157 ttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    ||||||||||||| | || ||||||||||||| || |||||||||  |||||||||| ||||||| |||||    
T  35263288 ttaatctaatggataaaaacaacttttccatgatggaaaacaactatcctttcccatgctaaacctcacct 35263358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 16689641 - 16689592
Alignment:
Q  178 acttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||||||||    
T  16689641 acttttccatggtgggaaagaacttccctttcccatactaaaccccacct 16689592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 4789569 - 4789521
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccac 225  Q
    |||||| ||||||||  |||||||||||||||||||| |||||||||||    
T  4789569 aactttcccatggtgggaaacaactcccctttcccatgctaaaccccac 4789521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 6803980 - 6803945
Alignment:
Q  194 aaacaactcccctttcccatactaaaccccaccttg 229  Q
    |||||||| |||||||||||||||||||||||||||    
T  6803980 aaacaacttccctttcccatactaaaccccaccttg 6803945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 36626565 - 36626664
Alignment:
Q  114 ataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||||||| ||||||||||| |||||| || | || || ||||||| ||| |||||| ||||||||| ||||||||  ||| ||||| | |||||||    
T  36626565 ataatctagtggttgagagagtatgataagaatatattccttatttaatataacggacatgatcaactttcccatggtgggaaagaactctcatttccca 36626664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 1969828 - 1969778
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    |||||| ||||||| ||||||||||| || ||||||| |||||||||||||    
T  1969828 aactttcccatggtaaaaaacaactctccattcccatgctaaaccccacct 1969778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 9923437 - 9923387
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    |||||||||||||||  ||||||||| || ||||||| |||||||||||||    
T  9923437 aacttttccatggtgggaaacaactctccattcccatgctaaaccccacct 9923387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 12201409 - 12201377
Alignment:
Q  194 aaacaactcccctttcccatactaaaccccacc 226  Q
    ||||||||| |||||||||||||||||||||||    
T  12201409 aaacaactctcctttcccatactaaaccccacc 12201377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 6e-40; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 54 - 212
Target Start/End: Complemental strand, 3971165 - 3971006
Alignment:
Q  54 tggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttc 152  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||| |||| ||||||||||| |||| | || |||| |    
T  3971165 tggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatcaagtggttgagagagtatgataggaatatgttcc 3971066  T
Q  153 tcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||    
T  3971065 tcatttaatctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttccca 3971006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 70 - 212
Target Start/End: Complemental strand, 36750201 - 36750059
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatgg 168  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| || | || ||||||||||||||||     
T  36750201 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatga 36750103  T
Q  169 acataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||| |||||||||||||||||| |||| ||||| |||||||||    
T  36750102 acatgatcaacttttccatggtggaaaagaactctcctttccca 36750059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 51 - 196
Target Start/End: Complemental strand, 44686430 - 44686284
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  44686430 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 44686331  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||    
T  44686330 ttctcatttaatctaatggacatgatcaactttctcatggtgaaaaa 44686284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 212
Target Start/End: Original strand, 3998716 - 3998875
Alignment:
Q  54 tggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttc 152  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||  |||||||| ||||| ||||||| |||| ||||||||||| |||| | || |||| |    
T  3998716 tggtggtggtatgggtgtgtggggacatgaaagagagagtgtaaaagatagtataaaaaaataatcaagtggttgagagagtatgataggaatatgttcc 3998815  T
Q  153 tcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||    
T  3998816 tcatttaatctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttccca 3998875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 45500626 - 45500480
Alignment:
Q  72 gtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggaca 171  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||    
T  45500626 gtggggacatgaaagagagagggtggaagataga-taaaacaataatctagtgttgagagagtagaataagaatgtgttcctcatttaatctaatggaca 45500528  T
Q  172 taatcaacttttccatggtgaaaaacaactcccctttcccatactaaa 219  Q
    ||||||||||| |||| ||| |||  |||||| ||  |||||||||||    
T  45500527 taatcaactttcccattgtggaaacaaactccactgacccatactaaa 45500480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 52492171 - 52492313
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatgg 168  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| || | || |||||||||||||||||    
T  52492171 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgg 52492269  T
Q  169 acataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||| | |||||||||||||||| |||| ||||| | |||||||    
T  52492270 acatgaacaacttttccatggtggaaaagaactctcatttccca 52492313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 38922919 - 38922757
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||| | ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  38922919 tagtggtggtggtatgggtgtgtgaggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 38922820  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||||||||||||||||| || ||||||||| |||||||   ||| ||||| |||||||||    
T  38922819 ttctcatttaatctaatggatatgatcaactttcccatggtaggaaataactctcctttccca 38922757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 38923537 - 38923699
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| ||||   || |||    
T  38923537 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgt 38923636  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||||||||||||||| |||| ||||||||||||||||||  ||| ||||| | |||||||    
T  38923637 tcctcatttaatctaatgaacattatcaacttttccatggtgggaaagaactctcatttccca 38923699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 45242242 - 45242080
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| || ||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  45242242 tagtggtggttgtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 45242143  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| ||||||||| ||||| || |||| ||||| | |||||||    
T  45242142 tcctcatttaatctaatggacatgatcaactttcccatgatggaaaagaactctcatttccca 45242080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 32490084 - 32490229
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| ||||||||||| ||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||| |||||||||||||||    
T  32490084 gtgtgtggggacatgaaagagggagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaat 32490183  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||| ||||||||||||||||||  ||| ||||| |||||||||    
T  32490184 ggacatgatcaacttttccatggtgggaaagaactctcctttccca 32490229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 45242859 - 45243021
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||| | ||||| ||||||||||| |||||||||||| |||| | || |||    
T  45242859 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagataatataaaaaaataatctagtggttgagagagtatgataggaatatgt 45242958  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||| || || ||||||||| |||||||| |||| |||||  ||||||||    
T  45242959 tcctcatttaatctaatagatatgatcaactttcccatggtggaaaagaactcttctttccca 45243021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 210
Target Start/End: Original strand, 41756304 - 41756464
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||| | |||||||||||| |||| | || |||    
T  41756304 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgataggaatatgt 41756403  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    | |||||||||||||||| |||| ||||||||| ||||| ||  ||| ||||| |||||||    
T  41756404 tcctcatttaatctaatgaacatgatcaactttcccatgatgggaaagaactctcctttcc 41756464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 52492062 - 52491926
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| ||||   || |||    
T  52492062 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgt 52491963  T
Q  150 ttctcatttaatctaatggacataatcaacttttcca 186  Q
    | || |||||||||||||||||| |||||||||||||    
T  52491962 tccttatttaatctaatggacatgatcaacttttcca 52491926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 36750318 - 36750471
Alignment:
Q  59 gtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatt 157  Q
    |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| |||||||||||| ||||||||||| ||||   || |||| ||||||    
T  36750318 gtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaa-aataatctagtggttgagagagtatgatagaaatatgttcctcatt 36750416  T
Q  158 taatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||||||| |||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  36750417 taatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttccca 36750471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 44687035 - 44687197
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||||||||  ||| ||||||||||||||| ||| |||||||| ||||| ||||||||| | |||||||||||| |||| | || | |    
T  44687035 tagtggtggtggtatgagtgtagggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgataggaatattt 44687134  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||||||||||||||| | || |||||||||||||||||| |||| || || |||||||||    
T  44687135 tcctcatttaatctaatgaatatgatcaacttttccatggtggaaaagaattctcctttccca 44687197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 3971782 - 3971911
Alignment:
Q  59 gtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgtttctcatt 157  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| ||||   || |||| ||||||    
T  3971782 gtggtatgagtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatt 3971881  T
Q  158 taatctaatggacataatcaacttttccat 187  Q
    |||||||||||| || ||||||||| ||||    
T  3971882 taatctaatggatatgatcaactttcccat 3971911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 41755675 - 41755513
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| |||||| |||| |||||||||||| ||||   || |||    
T  41755675 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatatagtggttgagagagtatgatagaaatatgt 41755576  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||||||||||||||| |||| ||||| |||  |||||||  ||| ||||| |||||||||    
T  41755575 tcctcatttaatctaatgaacatgatcaattttctcatggtgggaaaaaactctcctttccca 41755513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 3998096 - 3997967
Alignment:
Q  59 gtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgtttctcatt 157  Q
    |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| ||||   || |||| ||||||    
T  3998096 gtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatt 3997997  T
Q  158 taatctaatggacataatcaacttttccat 187  Q
    |||||||||||| || ||||||||| ||||    
T  3997996 taatctaatggatatgatcaactttcccat 3997967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 19132701 - 19132846
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| ||||||||||||||  ||| |||||| | ||||| ||||||| |||| ||||||||||| |||||| || |||| |||||||||||||||    
T  19132701 gtgtgtggggacatgaaagagagaatgtgaaagataatataaaaaaataatccagtggttgagagagtatgataagaatatgttcctcatttaatctaat 19132800  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||| ||||||||| ||||||||  ||| ||||  |||||||||    
T  19132801 ggacatgatcaactttcccatggtgggaaagaactttcctttccca 19132846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 8440119 - 8440234
Alignment:
Q  87 agagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttcca 186  Q
    |||||| ||| |||||||||||||| ||||||||| |||||||||||||| ||||  || |||| | ||||||||| |||| |||| |||||||||| ||    
T  8440119 agagagagtgaaagatagtgtaaaa-aataatctaatgttgagagagtagtataataatgtgttccacatttaatcaaatgcacattatcaactttttca 8440217  T
Q  187 tggtgaaaaacaactcc 203  Q
    |||||||||| ||||||    
T  8440218 tggtgaaaaaaaactcc 8440234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 8436574 - 8436682
Alignment:
Q  87 agagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttcca 186  Q
    |||||| |||||||||||||||||| ||||||||| |||||||| ||||| ||||  || |||| | ||||||||| |||| |||| |||||||||| ||    
T  8436574 agagagagtggaagatagtgtaaaa-aataatctaatgttgagaaagtagtataaaaatgtgttccacatttaatcaaatgcacattatcaactttttca 8436672  T
Q  187 tggtgaaaaa 196  Q
    ||||| ||||    
T  8436673 tggtggaaaa 8436682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 19132692 - 19132577
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||| | ||||| |||||||||||| ||||||||||| |||| | || |||| ||||||||||||||||||||| ||||||||| |||| ||   |||    
T  19132692 aagataatataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatagtaggaaa 19132593  T
Q  197 caactcccctttccca 212  Q
     ||||| |||||||||    
T  19132592 gaactctcctttccca 19132577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 8653616 - 8653768
Alignment:
Q  72 gtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggaca 171  Q
    ||||| ||||||||||||||||| ||||||||||||| || ||| ||||||||||||| || || ||||||  | |||||||||||| ||| |||||  |    
T  8653616 gtggggacatgaaagagagaggg-ggaagatagtgtagaa-aatgatctagtgttgagggaatatgataagagtgtgtttctcatttgatcaaatggtta 8653713  T
Q  172 taatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
     |||  |||||  |||||||  ||||||  ||||||| |||| ||||||||||||    
T  8653714 aaatttactttctcatggtgggaaacaatcccccttttccatgctaaaccccacc 8653768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 221
Target Start/End: Original strand, 45501205 - 45501337
Alignment:
Q  89 agagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatg 188  Q
    |||| ||| |||||| ||||||  |||||| ||||||| |||||||||||| |  || ||||  |||||| ||| |||||    |||  ||||| |||||    
T  45501205 agagagtgaaagatattgtaaacaaataatatagtgtttagagagtaggattaaaatgtgttcttcatttgatccaatggtttaaatttactttcccatg 45501304  T
Q  189 gtgaaaaacaactcccctttcccatactaaacc 221  Q
    ||| |||||||||||||||||||||||||||||    
T  45501305 gtggaaaacaactcccctttcccatactaaacc 45501337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 8652920 - 8652809
Alignment:
Q  116 aatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatac 215  Q
    |||||||||||||||||||||||| |  || |||| ||||||||||| |||||  | |||  ||||| ||||||||  || | | ||||||||||||| |    
T  8652920 aatctagtgttgagagagtaggattaaaatgtgttcctcatttaatcaaatggtgaaaatttactttcccatggtgggaaccgattcccctttcccatgc 8652821  T
Q  216 taaaccccacct 227  Q
    ||||||||||||    
T  8652820 taaaccccacct 8652809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 32490075 - 32489960
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||||| ||||| ||||||  |||| ||||||||||| ||||   || |||| || |||||||||||||||||| ||||||||| |||||||| ||||    
T  32490075 aagatagtataaaaaaataattcagtggttgagagagtatgatagaaatatgttccttatttaatctaatggacatgatcaactttcccatggtggaaaa 32489976  T
Q  197 caactcccctttccca 212  Q
     || || |||||||||    
T  32489975 gaattctcctttccca 32489960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 49161057 - 49160986
Alignment:
Q  156 tttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    ||||||| ||||| |||||  | ||||||||||||   |||||||||||||||||||| |||||||||||||    
T  49161057 tttaatcgaatggtcataaaaatcttttccatggtaggaaacaactcccctttcccatgctaaaccccacct 49160986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 43768758 - 43768807
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    |||||| |||||||| |||||||||| || ||||||| ||||||||||||    
T  43768758 aactttcccatggtggaaaacaactctccattcccatgctaaaccccacc 43768807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 45297598 - 45297549
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    |||||| ||||| ||  ||||||||| |||||||||||||||||||||||    
T  45297598 aactttcccatgatgggaaacaactctcctttcccatactaaaccccacc 45297549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 49161790 - 49161858
Alignment:
Q  160 atctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacctt 228  Q
    ||||||||  |||||  |||||| ||||||||  |||||| ||||||||||||| ||||||| ||||||    
T  49161790 atctaatgctcataaaaaactttcccatggtgggaaacaattcccctttcccatgctaaacctcacctt 49161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 9e-39; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 37864179 - 37864320
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  37864179 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 37864278  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtg 191  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  37864279 ttctcatttaatctaatggacatgatcaactttcccatggtg 37864320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 210
Target Start/End: Complemental strand, 38072074 - 38071914
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  38072074 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 38071975  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    | ||||||||||||||||||||| ||||||||| ||||| ||  ||| ||||| |||||||    
T  38071974 tcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcc 38071914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 38072183 - 38072325
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatgg 168  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| || | ||  ||||||||||||||||    
T  38072183 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcatcatttaatctaatgg 38072281  T
Q  169 acataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||| ||||||||| |||||||| |||| ||||| | |||||||    
T  38072282 acatgatcaactttcccatggtggaaaagaactctcatttccca 38072325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 668355 - 668193
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| |||||||| || |||||||||||| |||| | || |||    
T  668355 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctggtggttgagagagtatgataggaatatgt 668256  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |  |||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  668255 tcttcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 668193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 7677702 - 7677843
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatgga 169  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| || |||||| || |||| |||||||||||||||| |    
T  7677702 gtgtgagaacatgaaagagagagggtggaagatattgtaaaa-aataatttagtgttgagagaatatgataagaatgtgttcctcatttaatctaatgaa 7677800  T
Q  170 cataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  7677801 catgatcaactttcccatggtgggaaagaactctcctttccca 7677843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 4261361 - 4261221
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatgg 168  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||| || | || |||||||||||||||||    
T  4261361 gtgtgagaacatgaaagagagaggttggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgg 4261263  T
Q  169 acataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    |||| ||||||||| |||||||  |||| ||||| |||||||    
T  4261262 acatgatcaactttcccatggtagaaaagaactctcctttcc 4261221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 668975 - 669137
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  668975 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgt 669074  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||| |||||||||| || ||||||||| | ||||||  ||| ||||| | |||||||    
T  669075 tcctcatttgatctaatggatatgatcaactttcctatggtgggaaaaaactctcatttccca 669137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 7677593 - 7677431
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| ||||||||||| |||||| ||||||||||||||| ||  |||||||| ||||| |||||| |||| |||||||||||| ||||   || |||    
T  7677593 tagtggtggtggtatgagtctgtggggacatgaaagagagagtgtaaaagatagtataaaaaaataatttagtggttgagagagtatgatagaaatatgt 7677494  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| |||||||||| |||||||  ||| || || |||||||||    
T  7677493 tcctcatttaatctaatggacatgatcaactttttcatggtgggaaagaattctcctttccca 7677431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 17145786 - 17145636
Alignment:
Q  64 atgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataa-taatctagtg-ttgagagagtaggataaggatttgtttctcatttaat 161  Q
    |||| |||||||| ||||||||||||||| ||| |||||||| ||||| || |||||||||| ||||||||||| |||| | || |||| ||||||||||    
T  17145786 atgaatgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaat 17145687  T
Q  162 ctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  17145686 ctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 17145636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 4261487 - 4261628
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatgg 168  Q
    ||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||| || ||||||||||| ||||   || |||| |||||||||||||||||    
T  4261487 gtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgatagaaatatgttcctcatttaatctaatgg 4261586  T
Q  169 acataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    | || ||||||||| ||||||||  ||| ||||| |||||||    
T  4261587 agatgatcaactttcccatggtgggaaagaactctcctttcc 4261628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 32859388 - 32859256
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatgga 169  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||||| || |||||||||||||| ||||| || |||| | |||||||||||||| |    
T  32859388 gtgtggggacatgaaagtgagagggtggaagatagtgtaaaa-aataatttaatgttgagagagtagtataagaatgtgttccacatttaatctaatgca 32859290  T
Q  170 cataatcaacttttccatggtgaaaaacaactcc 203  Q
     |  ||||||||| || || ||||||| ||||||    
T  32859289 tactatcaactttcccgtgatgaaaaaaaactcc 32859256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 40257704 - 40257580
Alignment:
Q  102 tagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaact 201  Q
    ||||| |||| ||||||| |||||||| |||  | |||||| || |||||||||||| |||||||||||| ||  ||||||||||||||  |||||||||    
T  40257704 tagtggaaaaaaataatcaagtgttgatagatcatgataagaatgtgtttctcatttgatctaatggacaaaaataacttttccatggtcgaaaacaact 40257605  T
Q  202 cccctttcccatactaaaccccacc 226  Q
    | | |||||||||||||||||||||    
T  40257604 ctcatttcccatactaaaccccacc 40257580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 38779496 - 38779597
Alignment:
Q  111 ataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    |||||||||||||||||||||||||  ||||| || | || ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||    
T  38779496 ataataatctagtgttgagagagtattataagaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcc 38779595  T
Q  211 ca 212  Q
    ||    
T  38779596 ca 38779597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 42607213 - 42607080
Alignment:
Q  94 gtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaa 193  Q
    ||||||||||  || ||| ||||||| |||||||| |||  | ||||||  | |||||||||||| |||||||||||| || ||||||| ||||||||      
T  42607213 gtggaagataaagtgaaaaaataatcaagtgttgatagatcatgataagattgtgtttctcatttgatctaatggacaaaaacaactttcccatggtggg 42607114  T
Q  194 aaacaactcccctttcccatactaaaccccacct 227  Q
    |||||| ||||||||||||| |||||||||||||    
T  42607113 aaacaattcccctttcccatgctaaaccccacct 42607080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 17145791 - 17145906
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||| | ||||| |||||||||||| ||||||||||| |||| | || ||||  |||||||||||||||||||| ||||||||| |||| || |||||    
T  17145791 aagataatataaaaaaataatctagtggttgagagagtatgataggaatatgttattcatttaatctaatggacatgatcaactttcccatagtaaaaaa 17145890  T
Q  197 caactcccctttccca 212  Q
     ||||| |||||||||    
T  17145891 gaactctcctttccca 17145906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 33323807 - 33323924
Alignment:
Q  80 atgaaagagagagggtggaagatagtgtaaaataa-taatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaa 178  Q
    |||||||||||||  || ||||||||||||||||| |||| |||||||| |||||  | ||||| || |||| ||||||||||||||  |||||||||||    
T  33323807 atgaaagagagagaatgaaagatagtgtaaaataaataatatagtgttgtgagagcggaataagaatatgttcctcatttaatctaacagacataatcaa 33323906  T
Q  179 cttttccatggtgaaaaa 196  Q
     ||||||||  |||||||    
T  33323907 tttttccataatgaaaaa 33323924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 226
Target Start/End: Original strand, 36845121 - 36845250
Alignment:
Q  95 tggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaa 194  Q
    ||||||||| |||||||  |||||||||||||||| || || |||||   | |||| || |  ||||||||||| |||||  |||||||||||| ||| |    
T  36845121 tggaagataatgtaaaa--ataatctagtgttgagggactatgataatattatgttccttacataatctaatggtcataaaaaacttttccatgatgaga 36845218  T
Q  195 aacaactcccctttcccatactaaaccccacc 226  Q
    ||||| ||||||||||||| ||||||| ||||    
T  36845219 aacaattcccctttcccatgctaaacctcacc 36845250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 38778968 - 38778868
Alignment:
Q  113 aataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccc 211  Q
    |||||||||||| ||||||||||| |||| | || || | |||||||||||||||||| || ||||||||| ||||||||  ||| ||||| ||||||||    
T  38778968 aataatctagtggttgagagagtatgataggaatatgctcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttccc 38778869  T
Q  212 a 212  Q
    |    
T  38778868 a 38778868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 40257761 - 40257844
Alignment:
Q  137 gataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaac 220  Q
    |||||| || |||||||||||| |||||||||||| || |||||||  |||||||  ||||||||||| |||||||| ||||||    
T  40257761 gataagaatgtgtttctcatttgatctaatggacaaaaacaactttctcatggtgggaaacaactcccatttcccatgctaaac 40257844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 37468979 - 37469039
Alignment:
Q  152 ctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  37468979 ctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 37469039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 40320409 - 40320461
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccaccttg 229  Q
    |||||||||||||||  ||||||||| |||||||||| |||||||||||||||    
T  40320409 aacttttccatggtgggaaacaactctcctttcccatgctaaaccccaccttg 40320461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 24995921 - 24995851
Alignment:
Q  157 ttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    |||||||||||| || ||   ||||| ||||||||  |||||||||||||||||||| |||||||||||||    
T  24995921 ttaatctaatggtcaaaaaatactttcccatggtgggaaacaactcccctttcccattctaaaccccacct 24995851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 30513688 - 30513639
Alignment:
Q  178 acttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||| ||||    
T  30513688 acttttccataatgagaaacaactcccctttcccatactaaaccctacct 30513639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 9091 - 9145
Alignment:
Q  174 atcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacctt 228  Q
    ||||||||| ||||  |||||||| ||| ||||||||||||||||||| ||||||    
T  9091 atcaactttcccatcatgaaaaactacttccctttcccatactaaacctcacctt 9145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 29060738 - 29060788
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    |||||| ||||||||  |||||| ||||||||||||| |||||||||||||    
T  29060738 aactttcccatggtgggaaacaattcccctttcccatgctaaaccccacct 29060788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 42607748 - 42607861
Alignment:
Q  113 aataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||| |||||||| ||| || ||||||  | |||||||||||| ||| |||||||| ||  |||||| | ||| ||  |||||| |||||||| |||    
T  42607748 aataatcaagtgttgatagattatgataagattgtgtttctcatttgatc-aatggacaaaaataactttcctatgatgggaaacaattccccttttcca 42607846  T
Q  213 tactaaaccccacct 227  Q
    | |||||||||||||    
T  42607847 tgctaaaccccacct 42607861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 46757465 - 46757428
Alignment:
Q  185 catggtgaaaaacaactcccctttcccatactaaaccc 222  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  46757465 catggtggaaaacaactcctctttcccatactaaaccc 46757428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 24307767 - 24307819
Alignment:
Q  175 tcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    |||||||| |||||  | |||| ||||||||||||||||||||||| ||||||    
T  24307767 tcaactttcccatgaaggaaaagaactcccctttcccatactaaactccacct 24307819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 27599280 - 27599224
Alignment:
Q  157 ttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccat 213  Q
    |||||||||||| || | | |||||| ||||||||  ||||||||||||||||||||    
T  27599280 ttaatctaatggtcaaatttaactttcccatggtgggaaacaactcccctttcccat 27599224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 41195261 - 41195329
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataa 141  Q
    ||||||||||||||||    |||||| || |||||||| ||||| ||||||||||||| ||||||||| |||||    
T  41195261 gtgtgtgggaacatga----gagaggatgaaagatagtataaaa-aataatctagtgtggagagagtatgataa 41195329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 46756318 - 46756270
Alignment:
Q  178 acttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    |||||||||||||| ||||||||| |||||||||| | ||||| |||||    
T  46756318 acttttccatggtggaaaacaacttccctttcccaaattaaacgccacc 46756270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 27370 - 27235
Alignment:
Q  76 gaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataat 175  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||| || |||| ||||||||||||||||||||| ||    
T  27370 gaacatgaaagagagagggtggaagatagtgtaaaa-aataatttagtgttgagagagtatgataagaatgtgttcctcatttaatctaatggacatgat 27272  T
Q  176 caacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||| ||||| ||  ||| ||||| |||||||||    
T  27271 caactttcccatgatgggaaagaactctcctttccca 27235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 27485 - 27538
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatag 104  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  27485 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatag 27538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 27544 - 27605
Alignment:
Q  147 tgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactccccttt 208  Q
    |||| |||||||||||||||||| || ||||||||| ||||||||  ||| ||||| |||||    
T  27544 tgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaaaaactctccttt 27605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 5035169 - 5035310
Alignment:
Q  70 gtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatgga 169  Q
    ||||| |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| |||||| || | || ||||||||||||||||||    
T  5035169 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaca-taatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgga 5035267  T
Q  170 cataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||| ||||||||| | |||||| |||| ||||| |||||||||    
T  5035268 catgatcaactttcctatggtggaaaagaactctcctttccca 5035310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 38023800 - 38023638
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| ||||   || |||    
T  38023800 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgt 38023701  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||||||||||||||| |||| ||||||||||||||| || |||| || || |||||||||    
T  38023700 tcctcatttaatctaatgaacatgatcaacttttccatgatggaaaagaattctcctttccca 38023638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 37639887 - 37639725
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| ||||||||||||  ||| | || |||    
T  37639887 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatcataggaatatgt 37639788  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | |||||||||||||||| | || ||||||||| ||||||||  ||| ||||| |||||||||    
T  37639787 tcctcatttaatctaatgaatatgatcaactttcccatggtgggaaagaactctcctttccca 37639725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 41859486 - 41859324
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| | ||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||    
T  41859486 tagtggtggtggtatgggtgtgtggggatatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatatgaatatgt 41859387  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |  ||||||||||||| |||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  41859386 tcttcatttaatctaacggacatgatcaactttcccatggtgggaaagaactctcctttccca 41859324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 41859968 - 41860130
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| |||||| |||| ||||||| |||| ||||   || |||    
T  41859968 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatatagtggttgagaaagtatgatagaaatatgt 41860067  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    | ||||||||||||||||||||| |||||||||||||| || ||||| |||||  ||||||||    
T  41860068 tcctcatttaatctaatggacatgatcaacttttccatagtaaaaaataactcttctttccca 41860130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 32536876 - 32536743
Alignment:
Q  59 gtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgtttctcatt 157  Q
    |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || |||| | ||||    
T  32536876 gtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttccccatt 32536777  T
Q  158 taatctaatggacataatcaacttttccatggtg 191  Q
    ||||||||||||||| ||||||||| ||||||||    
T  32536776 taatctaatggacatgatcaactttcccatggtg 32536743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 34992153 - 34992298
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| ||||||||||||||| ||| |||||||| ||||| |||||| ||||| ||||||||||| |||| | || |||| |||||||||||||||    
T  34992153 gtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatttagtggttgagagagtatgataggaatatgttcctcatttaatctaat 34992252  T
Q  167 ggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  34992253 ggacatgatcaactttcccatggtgggaaaaaactctcctttccca 34992298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 32537360 - 32537492
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| | | |||||||| ||||| ||||||||||| |||||||||||| |||||| || |||    
T  32537360 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgcgaaagatagtataaaaaaataatctagtggttgagagagtatgataagaatatgt 32537459  T
Q  150 ttctcatttaatctaatggacataatcaacttt 182  Q
    | || ||||||| |||||||||| || ||||||    
T  32537460 tccttatttaatataatggacatgattaacttt 32537492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 5035027 - 5034912
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||||| ||||| |||||||||||| ||||||||||| |||| | || |||| |||||| |||||||||||||| ||||||||| |||||||| ||||    
T  5035027 aagatagtataaaaaaataatctagtggttgagagagtatgatatgaatatgttcctcattcaatctaatggacatgatcaactttcccatggtggaaaa 5034928  T
Q  197 caactcccctttccca 212  Q
     ||||| |||||||||    
T  5034927 gaactctcctttccca 5034912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 34992144 - 34992029
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||| | ||||| |||||| ||||| ||||||||||| ||||   || |||| ||||||||||||||||||||| |||||||||||||||||| ||||    
T  34992144 aagataatataaaaaaataatttagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaacttttccatggtggaaaa 34992045  T
Q  197 caactcccctttccca 212  Q
     ||||| | |||||||    
T  34992044 taactctcgtttccca 34992029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 38024406 - 38024492
Alignment:
Q  54 tggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggata 140  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| ||||    
T  38024406 tggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaa-aataatctagtggttgagagagtatgata 38024492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 37640469 - 37640537
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatc 119  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| |||||||    
T  37640469 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatc 37640537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 35943189 - 35943074
Alignment:
Q  113 aataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||| |||||||| |||  | ||||||  | |||||||||||| ||  |||||||| ||  |||||  ||||||||  |||||||| ||||||||||    
T  35943189 aataatcaagtgttgatagaccatgataagattgtgtttctcatttgattcaatggacaaaaaaaacttccccatggtgggaaacaacttccctttccca 35943090  T
Q  213 tactaaaccccacctt 228  Q
    | ||||||||||||||    
T  35943089 tgctaaaccccacctt 35943074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 40450933 - 40451035
Alignment:
Q  125 ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaacccca 224  Q
    |||||||| |||||| |  || |||| ||||||| |||||||||  | |||  ||||| ||||||||  ||||||||  | |||||||||||||||||||    
T  40450933 ttgagagaataggattaaaatgtgttcctcatttgatctaatggttaaaatttactttcccatggtgggaaacaacttacatttcccatactaaacccca 40451032  T
Q  225 cct 227  Q
    |||    
T  40451033 cct 40451035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 10501822 - 10501876
Alignment:
Q  86 gagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataag 142  Q
    |||||||||| || |||||||||||| ||||||||||||||||| ||||| ||||||    
T  10501822 gagagagggttgatgatagtgtaaaa-aataatctagtgttgag-gagtatgataag 10501876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 53 - 212
Target Start/End: Original strand, 21471828 - 21471988
Alignment:
Q  53 gtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgttt 151  Q
    ||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||| | || ||||     
T  21471828 gtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttc 21471927  T
Q  152 ctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |||||||||||||||||| || ||||||||| ||||||||  ||| ||||| |||||||||    
T  21471928 ctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttccca 21471988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 21471193 - 21471031
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgt 149  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| | |||||||||| |||| | || |||    
T  21471193 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggctgagagagtatgataggaatatgt 21471094  T
Q  150 ttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    |  |||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||||    
T  21471093 tcttcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 21471031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 37548176 - 37548012
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtgg--aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggattt 147  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| |||   ||||| || ||||| |||||||||||| ||||||||||| |||| | || |    
T  37548176 tagtggtggtggtatgggtgtgtggggacatgaaagagagagagtgtgaaagatggtataaaaaaataatctagtggttgagagagtatgataggaatat 37548077  T
Q  148 gtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||| ||||||||||||||||||||| ||||||||| ||||| ||  ||| ||||| |||||||||    
T  37548076 gttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttccca 37548012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 38834546 - 38834422
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgtttctcatttaatctaat 166  Q
    ||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||| |||||  || |||| |||||||||||||||    
T  38834546 gtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataaaaatatgttcctcatttaatctaat 38834447  T
Q  167 ggacataatcaacttttccatggtg 191  Q
    |||||| ||||||||| || |||||    
T  38834446 ggacatgatcaactttcccgtggtg 38834422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 4479603 - 4479736
Alignment:
Q  78 acatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatca 177  Q
    |||||||||||||| | || |||||| | ||||| |||||| |||||| ||||||||| |||||| || |||| ||||||||||||||||||||| || |    
T  4479603 acatgaaagagagatgatgaaagataatataaaa-aataatttagtgtggagagagtatgataagaatatgttcctcatttaatctaatggacatgatta 4479701  T
Q  178 acttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||| ||||||||| ||| ||||| |||||||||    
T  4479702 actttcccatggtgagaaagaactctcctttccca 4479736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 14573376 - 14573275
Alignment:
Q  111 ataataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcc 210  Q
    ||||||||||||||||||||||||| |||||  || | || ||||||||||||||||||||| ||||||||| ||||||||  ||| ||||| |||||||    
T  14573376 ataataatctagtgttgagagagtatgataaaaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcc 14573277  T
Q  211 ca 212  Q
    ||    
T  14573276 ca 14573275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 36391067 - 36390956
Alignment:
Q  116 aatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatac 215  Q
    ||||||||||||||||| |||||| |  || |||| ||||||| |||||||||  | |||  ||||| ||||||||  |||||||| ||||||||||| |    
T  36391067 aatctagtgttgagagaataggattaaaatgtgttcctcatttgatctaatggttaaaatttactttcccatggtgggaaacaacttccctttcccatgc 36390968  T
Q  216 taaaccccacct 227  Q
    ||||||||||||    
T  36390967 taaaccccacct 36390956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 36391607 - 36391715
Alignment:
Q  113 aataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||||||||||||| || ||  |||||  |  ||| |||||||||| ||||||  | |||  ||||| |||||||| ||||||||||||||||||||    
T  36391607 aataatctagtgttgagggaataaaataagagtgcgttcctcatttaatttaatggttaaaatttactttcccatggtggaaaacaactcccctttccca 36391706  T
Q  213 tactaaacc 221  Q
    |||||||||    
T  36391707 tactaaacc 36391715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 13134447 - 13134332
Alignment:
Q  98 aagatagtgtaaaataataatctagt-gttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||||| ||||| ||||||||||| ||||| |||||| ||||   || |||| |||||||||| |||||||||| ||||||||| | ||||||  |||    
T  13134447 aagatagtataaaaaaataatctagtggttgatagagtatgatagaaatatgttcctcatttaatttaatggacatgatcaactttcctatggtgggaaa 13134348  T
Q  197 caactcccctttccca 212  Q
     ||||| |||||||||    
T  13134347 gaactctcctttccca 13134332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 14573936 - 14574033
Alignment:
Q  116 aatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    ||||||||| ||||||||||| |||| | || ||||||||||||||||||||||| || |||||||||   ||||||  ||| ||||| |||||||||    
T  14573936 aatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggatatgatcaactttcttatggtgggaaagaactctcctttccca 14574033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 34310070 - 34310109
Alignment:
Q  231 ttgactagtttctcatatttccattcatgatgatgtccat 270  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  34310070 ttgactagtttctcatatttccattcatgattatgtccat 34310109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 38834555 - 38834670
Alignment:
Q  98 aagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    |||||| | ||||| |||||||||||| ||||||||||| ||||   || ||||  |||||||||||||||||||| ||||||||| ||| |||   |||    
T  38834555 aagataatataaaaaaataatctagtggttgagagagtatgatagaaatatgttcttcatttaatctaatggacatgatcaactttcccacggtaggaaa 38834654  T
Q  197 caactcccctttccca 212  Q
     ||||| |||||||||    
T  38834655 aaactctcctttccca 38834670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 10670941 - 10670990
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    |||||||||||||||||||||||||  |||||||||| ||||||| ||||    
T  10670941 aacttttccatggtgaaaaacaactttcctttcccatgctaaacctcacc 10670990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 23876041 - 23876113
Alignment:
Q  156 tttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttcccatactaaaccccacctt 228  Q
    ||||||| ||||| |||||  | |||| ||||||||  ||||||||||| |||||||| ||||||||||||||    
T  23876041 tttaatcgaatggtcataaaaatctttcccatggtgggaaacaactcccatttcccatgctaaaccccacctt 23876113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 4993651 - 4993604
Alignment:
Q  179 cttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    ||||||||||||| ||||||||| ||| |||||||||||||| |||||    
T  4993651 cttttccatggtggaaaacaacttcccattcccatactaaacgccacc 4993604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 20992018 - 20992068
Alignment:
Q  177 aacttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    |||||| |||||||| |||||||||| || ||||||| |||||||||||||    
T  20992018 aactttcccatggtggaaaacaactctccattcccatgctaaaccccacct 20992068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 228
Target Start/End: Original strand, 24383079 - 24383113
Alignment:
Q  194 aaacaactcccctttcccatactaaaccccacctt 228  Q
    |||||||| ||||||||||||||||||||||||||    
T  24383079 aaacaacttccctttcccatactaaaccccacctt 24383113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 4479004 - 4478936
Alignment:
Q  68 gtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataa 141  Q
    ||||||||||||||||    |||||| || |||||||| ||||| ||||||||||||| ||||||||| |||||    
T  4479004 gtgtgtgggaacatga----gagaggatgaaagatagtataaaa-aataatctagtgtggagagagtatgataa 4478936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 5142532 - 5142572
Alignment:
Q  156 tttaatctaatggacataatcaacttttccatggtgaaaaa 196  Q
    ||||||||||||||||||||| |||||| ||||||| ||||    
T  5142532 tttaatctaatggacataatctactttttcatggtggaaaa 5142572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 31 - 194
Alignment:
Q  51 tagtggttgtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataa-taatctagtg-ttgagagagtaggataaggatttg 148  Q
    ||||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||| || |||||||||| ||||||||||| |||| | || ||    
T  31 tagtggtggtggtatgggtgtgtggggacatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatg 130  T
Q  149 tttctcatttaatctaatggacataatcaacttttccatggtgaaaaacaactcccctttccca 212  Q
    || |||||||||||||||| |||||||||||||| ||||||||  ||| ||||| |||||||||    
T  131 ttcctcatttaatctaatgaacataatcaactttcccatggtgggaaagaactctcctttccca 194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 9162 - 9288
Alignment:
Q  83 aaagagagagggtggaagatagtgtaaaataataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaactt 181  Q
    |||||||||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||||| || ||||  |||||||||||||||||||| || |||||    
T  9162 aaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataagaatatgttcatcatttaatctaatggacatgatgaactt 9261  T
Q  182 ttccatggtgaaaaacaactccccttt 208  Q
    ||||||||||||||| ||||| |||||    
T  9262 ttccatggtgaaaaaaaactctccttt 9288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 5483 - 5363
Alignment:
Q  59 gtggtatgagtgtgtgggaacatgaaagagagagggtggaagatagtgtaaaataataatctagtgttgagagagtaggataaggatttgtttctcattt 158  Q
    ||||| || ||||||||| ||||||||||||| |  |||||||||   ||||| ||||||||||| | || ||||||||||||| || ||||||||||||    
T  5483 gtggtgtgggtgtgtggggacatgaaagagagtg--tggaagatatcataaaa-aataatctagtatggaaagagtaggataagaatgtgtttctcattt 5387  T
Q  159 aatctaatggacataatcaacttt 182  Q
    ||||||||||| |||||| |||||    
T  5386 aatctaatggatataatctacttt 5363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 14058 - 14012
Alignment:
Q  180 ttttccatggtgaaaaacaactcccctttcccatactaaaccccacc 226  Q
    ||||||||||||  |||||||||||||||||||| ||||| ||||||    
T  14058 ttttccatggtgggaaacaactcccctttcccatgctaaatcccacc 14012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 531 - 580
Alignment:
Q  178 acttttccatggtgaaaaacaactcccctttcccatactaaaccccacct 227  Q
    ||||||||||||||  |||||||||||||||||||| || || |||||||    
T  531 acttttccatggtgggaaacaactcccctttcccatgcttaatcccacct 580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 43234 - 43266
Alignment:
Q  194 aaacaactcccctttcccatactaaaccccacc 226  Q
    ||||||||||||||| |||||||||||||||||    
T  43234 aaacaactccccttttccatactaaaccccacc 43266  T

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