View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14695_low_41 (Length: 235)

Name: NF14695_low_41
Description: NF14695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14695_low_41
NF14695_low_41
[»] chr3 (43 HSPs)
chr3 (1-97)||(10841444-10841540)
chr3 (1-88)||(10999758-10999845)
chr3 (1-91)||(53974305-53974395)
chr3 (1-86)||(20835594-20835679)
chr3 (1-86)||(40586183-40586268)
chr3 (1-87)||(20048333-20048419)
chr3 (1-91)||(36430262-36430352)
chr3 (1-86)||(4044820-4044905)
chr3 (1-86)||(4516026-4516111)
chr3 (1-86)||(22781919-22782004)
chr3 (1-86)||(25710886-25710971)
chr3 (1-86)||(33966895-33966980)
chr3 (1-86)||(37971686-37971771)
chr3 (1-86)||(38871120-38871205)
chr3 (14-89)||(84385-84460)
chr3 (14-90)||(7679722-7679798)
chr3 (14-86)||(32236132-32236204)
chr3 (8-86)||(7156690-7156768)
chr3 (1-86)||(33712635-33712719)
chr3 (14-86)||(20657412-20657484)
chr3 (14-86)||(26090201-26090273)
chr3 (1-85)||(41069837-41069920)
chr3 (14-85)||(24395096-24395167)
chr3 (14-86)||(672067-672139)
chr3 (1-86)||(35039572-35039657)
chr3 (1-86)||(36885752-36885837)
chr3 (1-91)||(7681015-7681105)
chr3 (1-86)||(11123858-11123943)
chr3 (1-86)||(33392511-33392596)
chr3 (1-86)||(36232683-36232768)
chr3 (1-53)||(6268370-6268422)
chr3 (1-86)||(38145252-38145337)
chr3 (2-86)||(44354511-44354595)
chr3 (47-86)||(22786329-22786368)
chr3 (1-57)||(54556376-54556432)
chr3 (1-87)||(36841117-36841203)
chr3 (1-63)||(48584857-48584919)
chr3 (1-63)||(49779866-49779928)
chr3 (1-86)||(30418690-30418775)
chr3 (15-86)||(4596451-4596522)
chr3 (1-63)||(14279129-14279191)
chr3 (1-86)||(11095647-11095732)
chr3 (2-86)||(2613339-2613423)
[»] chr2 (30 HSPs)
chr2 (1-91)||(1481806-1481896)
chr2 (1-89)||(13196137-13196225)
chr2 (1-88)||(25853432-25853519)
chr2 (1-88)||(44143358-44143445)
chr2 (1-86)||(927064-927149)
chr2 (1-86)||(15011819-15011904)
chr2 (1-90)||(39697777-39697866)
chr2 (1-87)||(1520175-1520261)
chr2 (1-86)||(45505785-45505870)
chr2 (1-89)||(40811772-40811860)
chr2 (1-86)||(3178226-3178311)
chr2 (1-86)||(10638778-10638863)
chr2 (1-86)||(21657927-21658012)
chr2 (1-86)||(34202279-34202364)
chr2 (1-86)||(42342968-42343053)
chr2 (15-91)||(35895487-35895563)
chr2 (15-86)||(32551681-32551752)
chr2 (1-83)||(2390686-2390768)
chr2 (1-74)||(43577015-43577088)
chr2 (1-86)||(37094088-37094173)
chr2 (14-89)||(27980924-27980997)
chr2 (14-89)||(28067454-28067527)
chr2 (1-92)||(4331881-4331972)
chr2 (1-91)||(26170971-26171061)
chr2 (1-86)||(13480549-13480634)
chr2 (1-86)||(38629409-38629494)
chr2 (1-87)||(45443555-45443641)
chr2 (9-86)||(7722681-7722758)
chr2 (1-56)||(44456812-44456867)
chr2 (1-87)||(44798808-44798894)
[»] chr5 (36 HSPs)
chr5 (1-90)||(9065694-9065783)
chr5 (1-86)||(4156169-4156254)
chr5 (2-87)||(13145882-13145967)
chr5 (1-86)||(24559068-24559153)
chr5 (1-86)||(24600100-24600185)
chr5 (1-86)||(31527578-31527663)
chr5 (1-86)||(33280809-33280894)
chr5 (1-86)||(43518292-43518377)
chr5 (1-88)||(43293658-43293745)
chr5 (14-91)||(25084851-25084928)
chr5 (14-91)||(25142824-25142901)
chr5 (15-87)||(38760537-38760609)
chr5 (1-86)||(19034721-19034806)
chr5 (14-86)||(6469947-6470019)
chr5 (14-86)||(19617736-19617808)
chr5 (14-89)||(29920287-29920362)
chr5 (1-86)||(37865875-37865960)
chr5 (1-91)||(40738887-40738977)
chr5 (1-86)||(18864430-18864515)
chr5 (2-86)||(8232543-8232627)
chr5 (1-91)||(41881920-41882010)
chr5 (1-86)||(10666137-10666222)
chr5 (3-86)||(36294181-36294264)
chr5 (1-88)||(43548583-43548670)
chr5 (1-63)||(7338643-7338705)
chr5 (1-87)||(31484648-31484734)
chr5 (1-88)||(42437375-42437462)
chr5 (1-63)||(4621169-4621231)
chr5 (1-91)||(31498832-31498922)
chr5 (1-63)||(37274615-37274677)
chr5 (2-86)||(12189307-12189391)
chr5 (1-89)||(18978447-18978535)
chr5 (1-85)||(6245188-6245272)
chr5 (2-44)||(37105892-37105934)
chr5 (2-63)||(18522184-18522245)
chr5 (1-86)||(37340800-37340885)
[»] scaffold0438 (1 HSPs)
scaffold0438 (1-91)||(2114-2204)
[»] scaffold0276 (2 HSPs)
scaffold0276 (1-87)||(12519-12605)
scaffold0276 (1-86)||(14048-14133)
[»] chr8 (42 HSPs)
chr8 (1-91)||(23357255-23357345)
chr8 (1-91)||(26290777-26290867)
chr8 (1-91)||(26304034-26304124)
chr8 (1-91)||(26337389-26337479)
chr8 (1-84)||(39365248-39365331)
chr8 (1-87)||(5988187-5988273)
chr8 (1-87)||(24822722-24822808)
chr8 (1-87)||(43664323-43664409)
chr8 (1-86)||(3032896-3032981)
chr8 (1-86)||(3137223-3137308)
chr8 (1-90)||(8376236-8376325)
chr8 (14-91)||(15839450-15839527)
chr8 (1-86)||(17122090-17122175)
chr8 (1-86)||(26122524-26122609)
chr8 (1-85)||(34917539-34917623)
chr8 (1-87)||(42512158-42512244)
chr8 (1-86)||(34565027-34565112)
chr8 (1-86)||(35605337-35605422)
chr8 (14-86)||(28885723-28885795)
chr8 (14-86)||(28909662-28909734)
chr8 (14-88)||(37577981-37578055)
chr8 (1-86)||(8656554-8656639)
chr8 (1-86)||(22439604-22439689)
chr8 (14-86)||(8013936-8014008)
chr8 (14-86)||(11587898-11587970)
chr8 (8-91)||(12713582-12713665)
chr8 (14-86)||(5599872-5599944)
chr8 (14-86)||(5640676-5640748)
chr8 (14-86)||(17601334-17601406)
chr8 (1-96)||(42687940-42688035)
chr8 (1-86)||(31793848-31793933)
chr8 (1-83)||(12722559-12722641)
chr8 (1-86)||(41942360-41942445)
chr8 (1-91)||(38945683-38945773)
chr8 (1-86)||(36057731-36057816)
chr8 (1-86)||(38234417-38234502)
chr8 (15-86)||(38460114-38460185)
chr8 (1-86)||(4005765-4005850)
chr8 (19-87)||(28620416-28620484)
chr8 (15-86)||(35329739-35329810)
chr8 (1-50)||(7970033-7970081)
chr8 (1-85)||(5347476-5347560)
[»] chr7 (42 HSPs)
chr7 (1-87)||(46322041-46322127)
chr7 (1-86)||(26015861-26015946)
chr7 (1-86)||(32542178-32542263)
chr7 (1-86)||(35924230-35924315)
chr7 (1-86)||(38876049-38876134)
chr7 (1-89)||(38283586-38283674)
chr7 (1-89)||(47779504-47779592)
chr7 (3-86)||(7790903-7790986)
chr7 (1-91)||(47065935-47066025)
chr7 (1-86)||(21279064-21279149)
chr7 (1-86)||(32662363-32662448)
chr7 (1-86)||(40705507-40705592)
chr7 (1-86)||(43246952-43247037)
chr7 (1-86)||(46923878-46923963)
chr7 (2-89)||(8203437-8203524)
chr7 (2-89)||(8215914-8216001)
chr7 (14-88)||(42095782-42095856)
chr7 (1-86)||(7900433-7900518)
chr7 (1-86)||(25876776-25876861)
chr7 (1-86)||(34591676-34591761)
chr7 (1-91)||(40995182-40995272)
chr7 (14-91)||(43047094-43047171)
chr7 (14-86)||(39074364-39074436)
chr7 (1-86)||(27324955-27325040)
chr7 (14-86)||(21874639-21874711)
chr7 (1-86)||(40994808-40994893)
chr7 (1-86)||(43775883-43775968)
chr7 (1-88)||(12847173-12847260)
chr7 (3-86)||(20492684-20492767)
chr7 (1-91)||(10594079-10594169)
chr7 (47-88)||(19687094-19687135)
chr7 (1-86)||(24980855-24980940)
chr7 (1-88)||(42436503-42436590)
chr7 (1-63)||(39597868-39597930)
chr7 (1-63)||(40862382-40862444)
chr7 (1-86)||(45870168-45870253)
chr7 (3-87)||(40305474-40305558)
chr7 (15-86)||(29042144-29042215)
chr7 (15-63)||(7883688-7883737)
chr7 (1-33)||(19021057-19021089)
chr7 (14-86)||(25764874-25764946)
chr7 (2-86)||(30173462-30173546)
[»] chr1 (44 HSPs)
chr1 (1-87)||(39569454-39569540)
chr1 (1-86)||(24317181-24317266)
chr1 (1-86)||(33010785-33010870)
chr1 (1-90)||(40400029-40400118)
chr1 (8-91)||(13240225-13240308)
chr1 (1-87)||(6653223-6653309)
chr1 (1-87)||(44721870-44721956)
chr1 (1-86)||(2482631-2482716)
chr1 (1-86)||(15932786-15932871)
chr1 (1-86)||(34270772-34270857)
chr1 (1-86)||(42948189-42948274)
chr1 (1-86)||(50727797-50727882)
chr1 (1-86)||(52024725-52024810)
chr1 (1-86)||(52044388-52044473)
chr1 (14-88)||(11173512-11173586)
chr1 (1-86)||(13942143-13942228)
chr1 (1-86)||(26151164-26151249)
chr1 (1-86)||(28852918-28853003)
chr1 (14-87)||(39982262-39982335)
chr1 (1-86)||(49823204-49823289)
chr1 (14-86)||(14247457-14247529)
chr1 (1-81)||(20581504-20581584)
chr1 (14-86)||(51290549-51290621)
chr1 (2-87)||(2138245-2138330)
chr1 (14-86)||(40536800-40536872)
chr1 (1-88)||(18909213-18909300)
chr1 (9-86)||(51677255-51677332)
chr1 (1-91)||(51776024-51776114)
chr1 (1-86)||(29922224-29922309)
chr1 (1-86)||(40498617-40498702)
chr1 (3-89)||(23444345-23444431)
chr1 (3-86)||(7009008-7009091)
chr1 (15-86)||(48933215-48933286)
chr1 (1-83)||(41712763-41712845)
chr1 (1-86)||(9640891-9640976)
chr1 (1-86)||(17605727-17605812)
chr1 (1-86)||(26307846-26307931)
chr1 (1-86)||(51002031-51002116)
chr1 (15-87)||(13146021-13146093)
chr1 (1-85)||(17474665-17474749)
chr1 (3-86)||(32086482-32086565)
chr1 (1-92)||(35273820-35273911)
chr1 (1-63)||(8114904-8114966)
chr1 (2-90)||(6016614-6016702)
[»] scaffold0391 (1 HSPs)
scaffold0391 (1-86)||(3875-3960)
[»] chr4 (49 HSPs)
chr4 (1-86)||(39540414-39540499)
chr4 (1-86)||(42724194-42724279)
chr4 (1-86)||(52913206-52913291)
chr4 (1-86)||(53875123-53875208)
chr4 (1-86)||(55219867-55219952)
chr4 (2-86)||(56362818-56362902)
chr4 (1-88)||(10542045-10542132)
chr4 (1-87)||(613822-613908)
chr4 (1-87)||(20434161-20434247)
chr4 (8-86)||(53036035-53036113)
chr4 (1-86)||(55215606-55215691)
chr4 (1-87)||(28406451-28406537)
chr4 (1-86)||(19874135-19874220)
chr4 (1-86)||(23895208-23895293)
chr4 (1-86)||(42348660-42348745)
chr4 (1-86)||(55183540-55183625)
chr4 (14-86)||(20737690-20737762)
chr4 (1-91)||(43830230-43830320)
chr4 (1-86)||(37234218-37234303)
chr4 (1-86)||(38291868-38291953)
chr4 (1-86)||(52839745-52839830)
chr4 (14-86)||(56018719-56018791)
chr4 (1-86)||(25857541-25857625)
chr4 (1-88)||(52307470-52307557)
chr4 (14-86)||(31709715-31709787)
chr4 (1-88)||(28803981-28804068)
chr4 (1-87)||(47467420-47467506)
chr4 (1-86)||(43458404-43458489)
chr4 (1-91)||(24034513-24034603)
chr4 (1-86)||(35339657-35339742)
chr4 (3-87)||(22301759-22301843)
chr4 (1-63)||(49338-49400)
chr4 (1-86)||(22847104-22847189)
chr4 (1-86)||(48990345-48990430)
chr4 (1-63)||(40430145-40430207)
chr4 (15-88)||(13962504-13962577)
chr4 (1-86)||(24896985-24897070)
chr4 (3-63)||(8713247-8713307)
chr4 (3-86)||(41202360-41202443)
chr4 (2-88)||(43621588-43621674)
chr4 (1-63)||(51322672-51322734)
chr4 (1-86)||(1522783-1522868)
chr4 (1-89)||(3026378-3026466)
chr4 (1-61)||(11682233-11682293)
chr4 (1-61)||(11690512-11690572)
chr4 (15-86)||(50561564-50561635)
chr4 (1-88)||(51322402-51322489)
chr4 (3-89)||(37683276-37683362)
chr4 (2-86)||(47429844-47429927)
[»] scaffold0368 (1 HSPs)
scaffold0368 (1-86)||(13862-13947)
[»] chr6 (19 HSPs)
chr6 (1-86)||(3094588-3094673)
chr6 (1-86)||(29630495-29630580)
chr6 (1-88)||(6167935-6168022)
chr6 (1-86)||(13889957-13890042)
chr6 (1-86)||(18893675-18893760)
chr6 (1-86)||(25335137-25335222)
chr6 (1-86)||(29122353-29122440)
chr6 (1-86)||(6625358-6625443)
chr6 (1-86)||(7141263-7141348)
chr6 (1-86)||(6925777-6925862)
chr6 (8-86)||(31091151-31091229)
chr6 (1-91)||(23350349-23350439)
chr6 (1-86)||(11369079-11369164)
chr6 (1-62)||(34085843-34085904)
chr6 (1-91)||(8525520-8525610)
chr6 (1-56)||(5714907-5714962)
chr6 (1-56)||(8811302-8811357)
chr6 (2-85)||(32173711-32173794)
chr6 (186-222)||(14029054-14029090)
[»] scaffold0248 (1 HSPs)
scaffold0248 (1-86)||(3023-3108)
[»] scaffold0065 (1 HSPs)
scaffold0065 (14-91)||(38424-38501)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-86)||(157114-157199)
scaffold0007 (2-89)||(200030-200117)
[»] scaffold0896 (1 HSPs)
scaffold0896 (1-56)||(3749-3804)
[»] scaffold0294 (1 HSPs)
scaffold0294 (3-47)||(12548-12592)


Alignment Details
Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10841444 - 10841540
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaacaaaac 97  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
10841444 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaaaaaaac 10841540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10999758 - 10999845
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
10999758 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 10999845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 53974395 - 53974305
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
53974395 ctttttgaaaatcaaattttatgaatgggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 53974305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20835594 - 20835679
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
20835594 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 20835679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40586183 - 40586268
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
40586183 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 40586268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20048419 - 20048333
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
20048419 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtagaaaaactca 20048333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36430352 - 36430262
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
36430352 ctttttgaaaatcaaattttatcaaagagtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 36430262  T

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Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4044820 - 4044905
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
4044820 ctttttgaaaatcaaattttatgaaagggtaatcttgttattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 4044905  T

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Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4516026 - 4516111
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
4516026 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactc 4516111  T

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Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22781919 - 22782004
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
22781919 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttgtggtgcaaccatgattaactagggtgcaagtagaaaaactc 22782004  T

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Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25710971 - 25710886
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
25710971 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactc 25710886  T

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Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33966980 - 33966895
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
33966980 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 33966895  T

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Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37971686 - 37971771
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
37971686 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 37971771  T

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Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 38871205 - 38871120
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
38871205 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactc 38871120  T

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Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 84460 - 84385
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
84460 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 84385  T

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Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 7679722 - 7679798
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaa 90  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
7679722 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactcaaaa 7679798  T

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Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 32236204 - 32236132
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
32236204 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 32236132  T

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Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 7156690 - 7156768
Alignment:
8 aaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
7156690 aaaatcaaattttatgaaagggtaatcttatcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 7156768  T

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Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33712635 - 33712719
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
33712635 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagt-gaaaaactc 33712719  T

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Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 20657412 - 20657484
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
20657412 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactc 20657484  T

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Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 26090273 - 26090201
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
26090273 aaattttatgaaagggtaatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactc 26090201  T

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Target: chr3; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 41069920 - 41069837
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaact 85  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
41069920 ctttttgaaaatcaaattttatgaaagggtaatcttgtcatttt-aggtgcaaccatgattaactagggtgcaagtagaaaaact 41069837  T

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Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 24395167 - 24395096
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaact 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
24395167 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtagaaaaact 24395096  T

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Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 672139 - 672067
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||    
672139 aaattttatgaaagggtaatcttatcattttggagtgcaaccatgattaactagggtgcaactagaaaaactc 672067  T

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Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35039657 - 35039572
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||  |||||| || |||||||||||    
35039657 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaaaagggtgtaattagaaaaactc 35039572  T

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Target: chr3; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36885752 - 36885837
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||  |||||| || |||||||||||    
36885752 ctttttgaaaataaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactc 36885837  T

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Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 7681015 - 7681105
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||| |||||||||||  ||||| ||||||| || ||||||||||| ||||    
7681015 ctttttgaaaattaaattttatggaagggtaattttgtcattttagggtgcaaccagaattaaatagggtgtaattagaaaaactccaaaa 7681105  T

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Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11123943 - 11123858
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||||||| ||||||| |||||| ||| ||| || |||||||||||    
11123943 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggcgcaaccaggattaaatagagtgtaattagaaaaactc 11123858  T

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Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33392596 - 33392511
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| ||||||||||||| |||||| |||||||||||||||  ||||| |||||| ||||||| || |||||||||||    
33392596 ctttttgaaaattaaattttatgaaaaggtaattttgtcattttggggtataaccaggattaaatagggtgtaattagaaaaactc 33392511  T

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Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36232683 - 36232768
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||  | |||| || |||||||||||    
36232683 cttttttaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacatggtgtaattagaaaaactc 36232768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6268370 - 6268422
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaa 53  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||    
6268370 ctttttgaaaatcaaattttaggaaagggtaatcttgtcattttggggtgcaa 6268422  T

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Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38145252 - 38145337
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| |||||||||||  |||||  ||| || || |||||||||||    
38145252 ctttttgaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccagaattaaacaggatgtaattagaaaaactc 38145337  T

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Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 44354511 - 44354595
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||| ||||| |||||||||| |||| ||||  ||||||||||||||||||||| ||||||  |||||| || |||||||||||    
44354511 tttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactc 44354595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 22786329 - 22786368
Alignment:
47 ggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||||||||||||||||||    
22786329 ggtgcaaccatgattaactagggtgcaagtagaaaaactc 22786368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 54556432 - 54556376
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccat 57  Q
    ||||||||||||||||||||||||||||||||| || ||||||| || || ||||||    
54556432 ctttttaaaaatcaaattttatgaaagggtaattttatcattttaggatgtaaccat 54556376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36841117 - 36841203
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||| |||||||||| ||||||||| || |||||||| ||| |||||| ||||||  ||| || || ||||||||||||    
36841117 ctttttgaaaattaaattttatggaagggtaattttatcattttgaggtacaaccaggattaaaaaggatgtaattagaaaaactca 36841203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48584919 - 48584857
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||||| || |||||| ||||||    
48584919 ctttttgaaaattaaattttatgaaaggataattttgtcattttggagtacaaccaggattaa 48584857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 49779866 - 49779928
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| ||||||||||||| | |||| ||||||||||||| |||||||| ||||||    
49779866 ctttttgaaaattaaattttatgaaaagataattttgtcattttgggatgcaaccaagattaa 49779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30418775 - 30418690
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||  |||| ||||  ||||||||||| ||||| ||||||||||  |||||| || |||||||||||    
30418775 ctttttgaaaattaaattttatagaaggataattctgtcattttggagtgcagccatgattaaacagggtgtaattagaaaaactc 30418690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 4596451 - 4596522
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||| ||||||||| ||||||||||||| |||||| | ||||||  ||| || || |||||||||||    
4596451 aattttatggaagggtaattttgtcattttgggatgcaactaggattaaacaggatgtaattagaaaaactc 4596522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14279191 - 14279129
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| |||||||||| ||  ||||| |||||||||| ||||||||||| ||||||    
14279191 ctttttgaaaattaaattttatggaaaagtaattttgtcattttagggtgcaaccaggattaa 14279129  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11095732 - 11095647
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||| ||||  ||||||| | ||||||||||  | |||||||| |||||| ||||||| || |||||||||||    
11095732 ctttttgaaaattaaatattatagaagggtatttttgtcattttatgatgcaaccaggattaaatagggtgtaattagaaaaactc 11095647  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 2613339 - 2613423
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||| ||||| ||||||||||||||| |||| || ||||||||   |||||||| ||||||  |||||| || |||||| ||||    
2613339 tttttgaaaattaaattttatgaaaggataattttatcattttgaaatgcaaccaagattaaacagggtgtaattagaaatactc 2613423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 1481896 - 1481806
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
1481896 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 1481806  T

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Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13196137 - 13196225
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
13196137 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 13196225  T

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Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25853432 - 25853519
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
25853432 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 25853519  T

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Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44143445 - 44143358
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
44143445 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 44143358  T

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Target: chr2; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 927149 - 927064
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
927149 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 927064  T

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Target: chr2; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15011904 - 15011819
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
15011904 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 15011819  T

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Target: chr2; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 39697777 - 39697866
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaa 90  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
39697777 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaactatgattaactagggtgcaagtagaaaaactcaaaa 39697866  T

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Target: chr2; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1520261 - 1520175
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
1520261 ctttttgaaaatcaaattttatgaaagggtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 1520175  T

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Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45505785 - 45505870
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
45505785 ctttttgaaaattaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 45505870  T

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Target: chr2; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40811772 - 40811860
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
40811772 ctttttgaaaatcaaattttatgaaaggataatcttttcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 40811860  T

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Target: chr2; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3178311 - 3178226
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
3178311 ctttttgaaaatcaaattttatgaaagggtaatcttatcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactc 3178226  T

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Target: chr2; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10638863 - 10638778
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
10638863 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaggtagaaaaactc 10638778  T

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Target: chr2; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 21658012 - 21657927
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
21658012 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactc 21657927  T

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Target: chr2; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34202364 - 34202279
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
34202364 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaactagggtgcaagtagaaaaactc 34202279  T

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Target: chr2; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42343053 - 42342968
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
42343053 ctttttgaaaatcaaattttatgaaaggataatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 42342968  T

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Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 35895563 - 35895487
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
35895563 aattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 35895487  T

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Target: chr2; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 32551681 - 32551752
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
32551681 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 32551752  T

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Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2390686 - 2390768
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaa 83  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
2390686 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaa 2390768  T

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Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43577088 - 43577015
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaa 74  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
43577088 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaa 43577015  T

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Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37094173 - 37094088
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||| | ||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||    
37094173 ctttttgaaaatcaaattttatgaaaagataatcttatcattttggtatgcaaccatgattaactagagtgcaagtagaaaaactc 37094088  T

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Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 27980924 - 27980997
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| ||  ||||||||||||||||    
27980924 aaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaagtaggatg--agtagaaaaactcaaa 27980997  T

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Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 28067454 - 28067527
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| ||  ||||||||||||||||    
28067454 aaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaagtaggatg--agtagaaaaactcaaa 28067527  T

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Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4331881 - 4331972
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaac 92  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| || |||||||| ||||||  |||||| || ||||||||||| |||||    
4331881 ctttttgaaaattaaattttatgaaagggtaattttgtcattttaggatgcaaccaggattaaagagggtgtaattagaaaaactctaaaac 4331972  T

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Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26171061 - 26170971
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||| |||||||||| ||||||||| |||| ||||||||||||||||| ||||||  |||||| || ||||||||||| ||||    
26171061 ctttttgaaaattaaattttatggaagggtaattttgttattttggggtgcaaccaagattaaacagggtgtaattagaaaaactctaaaa 26170971  T

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Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 13480549 - 13480634
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||  ||||||| || ||||||  | |||| || |||||||||||    
13480549 ctttttgaaaattaaattttatgaaagggtaattttgtcattttaaggtgcaatcaggattaaacatggtgtaattagaaaaactc 13480634  T

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Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38629409 - 38629494
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| ||||||||||||||| |||| || ||||||| || |||||||| ||||||  |||||| || |||||||||||    
38629409 ctttttgaaaattaaattttatgaaaggataattttatcattttaggatgcaaccaggattaaagagggtgtaattagaaaaactc 38629494  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45443555 - 45443641
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||| |||||||||||||||||||| || |||||||| |||| || || ||||||  | |||| || ||||||||||||    
45443555 ctttttgaaaattaaattttatgaaagggtaattttatcattttgaggtgtaatcaggattaaacatggtgtaattagaaaaactca 45443641  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 7722681 - 7722758
Alignment:
9 aaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||| |||||||||| ||||||||| || |||||||| ||||||||||  |||||  |||||| || |||||||||||    
7722681 aaattaaattttatggaagggtaattttatcattttgaggtgcaaccagaattaaacagggtgtaattagaaaaactc 7722758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44456812 - 44456867
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaacca 56  Q
    |||||| ||||| |||||||||||||||||||| || ||||||| || ||||||||    
44456812 ctttttgaaaattaaattttatgaaagggtaattttatcattttaggatgcaacca 44456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44798894 - 44798808
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||| | |||||||||||||| ||||| |||||||||||  ||| ||||| ||||||  |||||| || || |||||||||    
44798894 ctttttgaaacttaaattttatgaaagagtaattttgtcattttgaagtgtaaccaggattaaacagggtgtaattaaaaaaactca 44798808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9065783 - 9065694
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaa 90  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
9065783 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaa 9065694  T

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Target: chr5; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4156169 - 4156254
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
4156169 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 4156254  T

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Target: chr5; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 13145882 - 13145967
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
13145882 tttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 13145967  T

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Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24559153 - 24559068
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
24559153 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgactaactagggtgcaagtagaaaaactc 24559068  T

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Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24600185 - 24600100
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
24600185 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgactaactagggtgcaagtagaaaaactc 24600100  T

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Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 31527578 - 31527663
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
31527578 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactc 31527663  T

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Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33280894 - 33280809
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
33280894 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtacaaccatgattaactagggtgcaagtagaaaaactc 33280809  T

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Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43518292 - 43518377
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
43518292 ctttttgaaaatcaaattttatgaaagggtactcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 43518377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 43293658 - 43293745
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
43293658 ctttttgaaaatcaaattttataaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 43293745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 25084928 - 25084851
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
25084928 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctaaaa 25084851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 25142901 - 25142824
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
25142901 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctaaaa 25142824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 38760537 - 38760609
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
38760537 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 38760609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19034721 - 19034806
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
19034721 ctttttgaaaatcaaattttatgaaaggataatcttgttattttggggtgcaaccatgattaactaaggtgcaagtagaaaaactc 19034806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 6469947 - 6470019
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
6469947 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaaggtgcaagtagaaaaactc 6470019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 19617736 - 19617808
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
19617736 aaattttatgaaagggtaatcttgttattttggggtgcaactatgattaactagggtgcaagtagaaaaactc 19617808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 29920362 - 29920287
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||    
29920362 aaattttatgaaagggtaatcttgttattttgaggtgcaaccatgattaactagggtgctagtagaaaaactcaaa 29920287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37865960 - 37865875
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
37865960 ctttttgaaaatcaaattttatgaaaggataattttgtcattttggggtgcaatcatgattaattagagtgcaagtagaaaaactc 37865875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40738977 - 40738887
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||  |||||| || ||||||||||| ||||    
40738977 ctttttgaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactctaaaa 40738887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18864515 - 18864430
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||  |||||| || |||||||||||    
18864515 cttttttaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactc 18864430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 8232627 - 8232543
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||  || ||| || |||||||||||    
8232627 tttttgaaaattaaattttatgaaagggtaatcttatcattttggggtgcaaccaggattaagcagagtgtaattagaaaaactc 8232543  T

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Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 41881920 - 41882010
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||| |||||||||| || |||||| ||||||||||||||||||||||  |||||  |||||| || ||||||||||||||||    
41881920 ctttttgaaaattaaattttatggaaaggtaattttgtcattttggggtgcaaccaaaattaaacagggtgtaattagaaaaactcaaaaa 41882010  T

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Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10666137 - 10666222
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||  |||||| || || ||||||||    
10666137 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacagggtgtaattataaaaactc 10666222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 36294264 - 36294181
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||| ||||| |||||||||| ||||||||| |||||||||||||||| ||||||||||||  | |||| || |||||||||||    
36294264 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgtaaccatgattaaacatggtgtaattagaaaaactc 36294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 43548583 - 43548670
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| ||||| |||||||||| |||| ||||  ||||||||||||||||||||| ||||||  |||||| || |||||||||||||    
43548583 ctttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactcaa 43548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7338705 - 7338643
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||| ||||||    
7338705 ctttttgaaaattaaattttatgaaaaggtaattttgtcattttggggtgcaaccaggattaa 7338643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31484734 - 31484648
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||| |||||||||| ||||||||| ||||||||||||||||||||||  |||||  ||| || || ||||||||||||    
31484734 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccagaattaaacaggctgtaattagaaaaactca 31484648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42437375 - 42437462
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| ||||| |||||||||| |||| ||||  ||||||||||||||||||||| ||||||  || ||| || |||||||||||||    
42437375 ctttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagagtgtaattagaaaaactcaa 42437462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4621231 - 4621169
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| || |||||||| ||||||    
4621231 ctttttgaaaattaaattttatgaaagggtaattttgtcattttaggatgcaaccaggattaa 4621169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31498922 - 31498832
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||| | ||||||| |  |||||  |||||| || ||||||||||||||||    
31498922 ctttttgaaaattaaattttatggaagggtaattttgtcattttagagtgcaacaagaattaaacagggtgtaattagaaaaactcaaaaa 31498832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37274615 - 37274677
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| |||||||||| ||||||||| ||||||||||||||||||| || ||||||    
37274615 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaagcaggattaa 37274677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 12189307 - 12189391
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||| ||||| |||||||||| ||||||||| || ||||||||||||| ||||| ||||||  | |||| || |||||||||||    
12189307 tttttgaaaattaaattttatggaagggtaattttatcattttggggtgtaaccaggattaaacaaggtgtaattagaaaaactc 12189391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18978535 - 18978447
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    |||||| ||||| |||||||||  |||| ||||  ||||||||||||||||||||| ||||||  |||||| || |||||||| |||||    
18978535 ctttttgaaaattaaattttatagaaggataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaattcaaa 18978447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6245272 - 6245188
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaact 85  Q
    |||||| ||||| |||||||||||||| ||||| |||||||| | | |||||||||  |||||  |||||| || ||||||||||    
6245272 ctttttgaaaattaaattttatgaaagtgtaattttgtcattctagagtgcaaccagaattaaacagggtgtaattagaaaaact 6245188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 37105934 - 37105892
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcatttt 44  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||    
37105934 tttttgaaaattaaattttatgaaagggtaattttgtcatttt 37105892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 18522245 - 18522184
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    ||||| ||||| |||||||||| |||| |||| |||| ||||| ||||||||||| ||||||    
18522245 tttttgaaaattaaattttatggaaggataattttgttattttagggtgcaaccaggattaa 18522184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37340885 - 37340800
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| |||| ||||  |||||||||||| ||||| ||  |||||  |||||| || |||||||||||    
37340885 ctttttgaaaattaaattttatggaaggataattctgtcattttgggatgcaatcagaattaaacagggtgtaattagaaaaactc 37340800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2114 - 2204
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
2114 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctaaaa 2204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12605 - 12519
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
12605 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 12519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14048 - 14133
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
14048 ctttttgaaaatcaaattttatgaaaggataatcttataattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 14133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 23357255 - 23357345
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
23357255 ctttttgaaaatcaaattttatgaaaaggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 23357345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26290777 - 26290867
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
26290777 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctaaaa 26290867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26304034 - 26304124
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
26304034 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctaaaa 26304124  T

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Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26337389 - 26337479
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
26337389 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctaaaa 26337479  T

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Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 39365331 - 39365248
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaac 84  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
39365331 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaac 39365248  T

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Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5988273 - 5988187
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
5988273 ctttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 5988187  T

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Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24822722 - 24822808
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
24822722 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactca 24822808  T

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Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43664323 - 43664409
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
43664323 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactca 43664409  T

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Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3032896 - 3032981
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
3032896 ctttttgaaaatcaaatgttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 3032981  T

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Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3137223 - 3137308
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
3137223 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactacggtgcaagtagaaaaactc 3137308  T

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Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8376325 - 8376236
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaa 90  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
8376325 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaattcaaaa 8376236  T

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Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 15839527 - 15839450
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
15839527 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 15839450  T

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Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17122175 - 17122090
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
17122175 ctttttgaaaatcaaattttatgaaagggtaatcttgttattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 17122090  T

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Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 26122524 - 26122609
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
26122524 ctttttgaaaatcaaattttatgaaagggtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 26122609  T

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Target: chr8; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34917623 - 34917539
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaact 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
34917623 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcatccatgattaactagggtgcaagtagaaaaact 34917539  T

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Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42512244 - 42512158
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
42512244 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttgggatgcaaccatgattaactaggatgcaagtagaaaaactca 42512158  T

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Target: chr8; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34565027 - 34565112
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
34565027 ctttttgaaaatcaaattttataaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 34565112  T

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Target: chr8; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35605422 - 35605337
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
35605422 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttgaggtgcaaccatgattaactagggtgtaagtagaaaaactc 35605337  T

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Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 28885723 - 28885795
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
28885723 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 28885795  T

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Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 28909734 - 28909662
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
28909734 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 28909662  T

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Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 37578055 - 37577981
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
37578055 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactcaa 37577981  T

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Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8656639 - 8656554
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
8656639 ctttttgaaaatcaaattttatgaaaggttaatcttgtcatttttggttgcaaccatgattaactagggtgcaagtagaaaaactc 8656554  T

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Target: chr8; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22439604 - 22439689
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||    
22439604 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttgaggtgtaaccatgattaactaggatgcaagtagaaaaactc 22439689  T

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Target: chr8; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 8013936 - 8014008
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
8013936 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactc 8014008  T

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Target: chr8; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 11587970 - 11587898
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
11587970 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaattagggtgcaagtagaaaaactc 11587898  T

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Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 12713582 - 12713665
Alignment:
8 aaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
12713582 aaaatcaaattttataaaaaggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctaaaa 12713665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 5599872 - 5599944
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
5599872 aaattttatgaaagggtaatcttgtcattttggaatgcaaccatgattaactagggtgcaagtagaaaaactc 5599944  T

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Target: chr8; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 5640748 - 5640676
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
5640748 aaattttatgaaagggtaatcttgtcattttggaatgcaaccatgattaactagggtgcaagtagaaaaactc 5640676  T

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Target: chr8; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 17601406 - 17601334
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
17601406 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaaggtgcaattagaaaaactc 17601334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42687940 - 42688035
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaacaaaa 96  Q
    |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||  || ||| || |||||||||||||||| ||||    
42687940 ctttttaaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaagattaaacagagtgtaattagaaaaactcaaaaaaaaaa 42688035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 31793848 - 31793933
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||  |||||| || |||||||||||    
31793848 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactc 31793933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12722641 - 12722559
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaa 83  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||  |||||| || ||||||||    
12722641 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaa 12722559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41942360 - 41942445
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||||||  |||||| || |||||||||||    
41942360 ctttttgaaaattaaattttatggaaggataattttgtcattttgggatgcaaccaggattaaacagggtgtaattagaaaaactc 41942445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38945773 - 38945683
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||| |||||||||| |||| |||| |||||||||| ||||||||||| ||||||  |  ||| || ||||||||||||||||    
38945773 ctttttgaaaattaaattttatggaaggataattttgtcattttagggtgcaaccaggattaaacattgtgtaattagaaaaactcaaaaa 38945683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36057731 - 36057816
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| |||| ||||  |||||||||||||||||||||  |||||  |||||| || |||||||||||    
36057731 ctttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccagaattaaacagggtgtaattagaaaaactc 36057816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 38234502 - 38234417
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||| |||||||||| |||| | || |||||||||||  |||||| || |||||| ||||||| || |||||||||||    
38234502 ctttttaaaaattaaattttatggaaggatcattttgtcattttgaagtgcaaacaggattaaatagggtgtaattagaaaaactc 38234417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 38460114 - 38460185
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||  ||||||||| ||||||||||| |||||||||| ||||||  |||||| || |||||||||||    
38460114 aattttatagaagggtaattttgtcattttgaggtgcaaccaggattaatcagggtgtaattagaaaaactc 38460185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4005850 - 4005765
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| ||||||||| ||||||||||  | | |||||| ||||||  |||||| || |||||||||||    
4005850 ctttttgaaaattaaattttatggaagggtaattttgtcattttaagatacaaccaggattaaacagggtgtaattagaaaaactc 4005765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 28620416 - 28620484
Alignment:
19 ttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    ||||| |||| ||||  |||||||||||||||||| || |||||| ||||||| || ||||||||||||    
28620416 ttatggaaggataattctgtcattttggggtgcaatcaagattaaatagggtgtaattagaaaaactca 28620484  T

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Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 35329739 - 35329810
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||| |||| |||| |||||||||||| ||||||||| ||||||  | |||| || |||||||||||    
35329739 aattttatggaaggataattttgtcattttggagtgcaaccaggattaaacatggtgtaattagaaaaactc 35329810  T

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Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7970033 - 7970081
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtg 50  Q
    |||||||||||| ||||||||||||| |||||| |||||||||| |||||    
7970033 ctttttaaaaat-aaattttatgaaaaggtaattttgtcattttagggtg 7970081  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 5347476 - 5347560
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaact 85  Q
    |||||| ||| | |||||||||||||||||||| || |||||||  |||| ||||| ||||||  ||| || || ||||||||||    
5347476 ctttttgaaacttaaattttatgaaagggtaattttatcattttaaggtgtaaccaggattaaacaggatgtaattagaaaaact 5347560  T

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Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 46322041 - 46322127
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
46322041 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 46322127  T

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Target: chr7; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 26015861 - 26015946
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
26015861 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 26015946  T

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Target: chr7; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32542178 - 32542263
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
32542178 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 32542263  T

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Target: chr7; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35924315 - 35924230
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
35924315 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 35924230  T

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Target: chr7; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38876049 - 38876134
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
38876049 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 38876134  T

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Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38283586 - 38283674
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
38283586 ctttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 38283674  T

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Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47779504 - 47779592
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
47779504 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtagaaaaactcaaa 47779592  T

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Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 7790986 - 7790903
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
7790986 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 7790903  T

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Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 47065935 - 47066025
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
47065935 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaagtagggtgcaagtagaaaaactccaaaa 47066025  T

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Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21279064 - 21279149
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
21279064 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 21279149  T

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Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32662363 - 32662448
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
32662363 ctttttgaaaatcaaattttatgaaaaggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 32662448  T

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Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40705507 - 40705592
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
40705507 ctttttgaaaatcaaattttatgaaagggcaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 40705592  T

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Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43246952 - 43247037
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
43246952 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactc 43247037  T

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Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 46923963 - 46923878
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
46923963 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactatggtgcaagtagaaaaactc 46923878  T

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Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 8203437 - 8203524
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
8203437 tttttgaaaatcaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactaaggtgcaagtagaaaaactcaaa 8203524  T

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Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 8215914 - 8216001
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
8215914 tttttgaaaatcaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactaaggtgcaagtagaaaaactcaaa 8216001  T

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Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 42095782 - 42095856
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
42095782 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 42095856  T

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Target: chr7; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 7900518 - 7900433
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
7900518 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtaaaaaaactc 7900433  T

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Target: chr7; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25876861 - 25876776
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
25876861 ctttttgaaaatcaaattttataaaagggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 25876776  T

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Target: chr7; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34591761 - 34591676
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
34591761 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactc 34591676  T

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Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40995272 - 40995182
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
40995272 ctttttgataatcaaattttatgaaagggtaatcttatcattttggggtgcaaccatgattaantagggtgcaagtagaaaaactctaaaa 40995182  T

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Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 43047094 - 43047171
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
43047094 aaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactctaaaa 43047171  T

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Target: chr7; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 39074364 - 39074436
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
39074364 aaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactc 39074436  T

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Target: chr7; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27325040 - 27324955
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||    
27325040 ctttttgaaaatcaaattttatgaaaggataatcttatcattttggagtgcaaccataattaactaggatgcaagtagaaaaactc 27324955  T

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Target: chr7; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 21874639 - 21874711
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
21874639 aaattttatgaaagaataatcttgtcattttagggtgcaaccatgattaactaggatgcaagtagaaaaactc 21874711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40994808 - 40994893
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||| ||||| |||||| || |||||  ||||||||||||||||||||| ||  ||||||||||||||    
40994808 ctttttgaaaatcaaattttataaaaggataatctcgttattttatggtgcaaccatgattaactagagtttaagtagaaaaactc 40994893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 43775968 - 43775883
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| ||||||||||||||| |||| || ||||||||||||||||||| |||||| |||| || || |||||||||||    
43775968 ctttttgaaaattaaattttatgaaaggataattttatcattttggggtgcaaccaggattaaataggatgtaattagaaaaactc 43775883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12847173 - 12847260
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| ||||| |||||||||| ||||||||| || ||||||||| ||||||||| ||||||  |||||| || |||||||||||||    
12847173 ctttttgaaaattaaattttatggaagggtaattttatcattttggagtgcaaccaggattaaacagggtgtaattagaaaaactcaa 12847260  T

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Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 20492767 - 20492684
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||| ||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||  |||||| || || ||||||||    
20492767 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaatcagggtgtaattataaaaactc 20492684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10594169 - 10594079
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||||||||| |||||||||| |||| ||||  ||| ||||||||||||||||| ||||||  |||||| || ||||||||||| ||||    
10594169 ctttttaaaaattaaattttatggaaggttaattctgttattttggggtgcaaccaggattaaacagggtgtaattagaaaaactctaaaa 10594079  T

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Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 19687135 - 19687094
Alignment:
47 ggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    ||||||||||||||||||||||||||||||||||||||||||    
19687135 ggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 19687094  T

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Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24980940 - 24980855
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| |||| |||| |||||||||| ||||||||||| ||||||  |||||| || |||||||||||    
24980940 ctttttgaaaattaaattttatggaaggataattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactc 24980855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42436503 - 42436590
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| ||||  |||||||||| |||||||||||||||||||||||||||| ||| ||||||  |||||  || || ||||||||||    
42436503 ctttttgaaaactaaattttatggaagggtaatcttgtcattttggggtgcagccaggattaaacagggtataattataaaaactcaa 42436590  T

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Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39597868 - 39597930
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| ||||||||||| ||| |||| |||||||||||||||||||||| ||||||    
39597868 ctttttgaaaattaaattttatgacaggataattttgtcattttggggtgcaaccaggattaa 39597930  T

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Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40862444 - 40862382
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||| |||||||| || ||||||    
40862444 ctttttgaaaattaaattttatgaaaggataattttgtcattttagggtgcaatcaggattaa 40862382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45870168 - 45870253
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||| ||||||||||  |||||  | |||| || |||||||||||    
45870168 ctttttgaaaattaaattttatggaaggataattttgtcattttgaggtgcaaccagaattaaacatggtgtaattagaaaaactc 45870253  T

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Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 40305474 - 40305558
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||| ||||| ||||||| |||||||||||| ||||||||||  ||||||||||  |||||  ||| || || ||||||||||||    
40305474 ttttgaaaattaaattttttgaaagggtaattttgtcatttttaggtgcaaccagaattaaacaggatgtaattagaaaaactca 40305558  T

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Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 29042215 - 29042144
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||| |||| ||||||||||| |||||||| | ||||||  | |||| || |||||||||||    
29042215 aattttatgaaaggataattttgtcattttgaggtgcaactaggattaaacaaggtgtaattagaaaaactc 29042144  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 7883688 - 7883737
Alignment:
15 aattttatgaaagggtaatcttgtcatttt-ggggtgcaaccatgattaa 63  Q
    ||||||||||||||||||| || ||||||| |||||||||||| ||||||    
7883688 aattttatgaaagggtaattttttcattttgggggtgcaaccaggattaa 7883737  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19021057 - 19021089
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaat 33  Q
    |||||| ||||||||||||||||||||||||||    
19021057 ctttttgaaaatcaaattttatgaaagggtaat 19021089  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 25764946 - 25764874
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||| ||||||||| ||||||||||| |||| ||||| |||||   | |||| || |||||||||||    
25764946 aaattttatgcaagggtaattttgtcattttgaggtgtaaccaggattatacatggtgtaattagaaaaactc 25764874  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 30173462 - 30173546
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||| ||||| |||||||||  || |||||| |||||||||||   |||||||| |||||| ||||||  || |||||||||||    
30173462 tttttgaaaattaaattttatagaaaggtaattttgtcattttgaaatgcaaccaagattaaatagggtataattagaaaaactc 30173546  T

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Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 39569454 - 39569540
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
39569454 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 39569540  T

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Target: chr1; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24317266 - 24317181
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
24317266 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 24317181  T

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Target: chr1; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33010785 - 33010870
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
33010785 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 33010870  T

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Target: chr1; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40400118 - 40400029
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaa 90  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
40400118 ctttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaa 40400029  T

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Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 13240225 - 13240308
Alignment:
8 aaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
13240225 aaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctaaaa 13240308  T

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Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6653309 - 6653223
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
6653309 ctttttgaaagtcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 6653223  T

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Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44721956 - 44721870
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
44721956 ctttttgaaaatcaaattttatgaaagggtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 44721870  T

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Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2482631 - 2482716
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
2482631 ctttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 2482716  T

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Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15932871 - 15932786
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
15932871 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 15932786  T

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Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34270772 - 34270857
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
34270772 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 34270857  T

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Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42948274 - 42948189
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
42948274 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactc 42948189  T

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Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50727882 - 50727797
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
50727882 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 50727797  T

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Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 52024810 - 52024725
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
52024810 ctttttgaaaatcaaattttatgaaagggtaatcctgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 52024725  T

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Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52044388 - 52044473
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
52044388 ctttttgaaaatcaaattttatgaaagggtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 52044473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 11173512 - 11173586
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
11173512 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 11173586  T

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Target: chr1; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13942228 - 13942143
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
13942228 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaaatagggtgcaagtagaaaaactc 13942143  T

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Target: chr1; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 26151164 - 26151249
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
26151164 ctttttgaaaatcaaattttatgaaaggataatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 26151249  T

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Target: chr1; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28852918 - 28853003
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
28852918 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactaggatgcaagtagaaaaactc 28853003  T

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Target: chr1; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 39982335 - 39982262
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
39982335 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 39982262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49823289 - 49823204
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
49823289 ctttttgaaaatcaaattttataaaagggtaatcttgtcattttggggtgcaaccatgattaattagggtgcaagtagaaaaactc 49823204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 14247457 - 14247529
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
14247457 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 14247529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20581584 - 20581504
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaa 81  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
20581584 ctttttgaaaatcaaattttatgaaagggtaattttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaa 20581504  T

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Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 51290621 - 51290549
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
51290621 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 51290549  T

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Target: chr1; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 2138245 - 2138330
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||    
2138245 tttttgaaaatcaaattttatgaaagggtaatcttatcattttgaggtgcaaccatgattaactagagtgcaagtagaaaaactca 2138330  T

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Target: chr1; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 40536800 - 40536872
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
40536800 aaattttatgaaagggtaatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactc 40536872  T

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Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18909300 - 18909213
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
18909300 ctttttgaaaatcaaattttatgaaagggtaatattgtcattttggaatgcaaccatgattaactagggtgtaagtagaaaaactcaa 18909213  T

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Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 51677255 - 51677332
Alignment:
9 aaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||| ||||||||||||||| |  |||||| |||||||||||||||||||||||||||||||    
51677255 aaatcaaattttatgaaaggataatcttgtcattttagaatgcaactatgattaactagggtgcaagtagaaaaactc 51677332  T

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Target: chr1; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 51776114 - 51776024
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||| ||||||  |||||| || ||||||||||| ||||    
51776114 ctttttaaaaattaaattttatggaagggtaattttgtcattttgggatgcaaccaggattaaacagggtgtaattagaaaaactctaaaa 51776024  T

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Target: chr1; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29922224 - 29922309
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||  |||||| || |||||||||||    
29922224 ctttttgaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactc 29922309  T

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Target: chr1; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40498702 - 40498617
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||  |||||  |||||| || |||||||||||    
40498702 ctttttgaaaattaaattttatgaaagggtaattttgtcattttggggtgcaaccagaattaaacagggtgtaattagaaaaactc 40498617  T

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Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 23444345 - 23444431
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    |||| ||||| ||||||||||||||| |||| |||||||| ||||||||||||| |||||| ||||||| || ||||||| ||||||    
23444345 ttttgaaaattaaattttatgaaaggataattttgtcattgtggggtgcaaccaagattaaatagggtgtaattagaaaatctcaaa 23444431  T

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Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 7009091 - 7009008
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||| ||||| |||||||||||||||||||| |||| ||||||||||| ||||| ||||||  ||||||  | |||||||||||    
7009091 tttttaaaattaaattttatgaaagggtaattttgttattttggggtgtaaccaggattaaacagggtgtgattagaaaaactc 7009008  T

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Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 48933286 - 48933215
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||| ||||||||| || |||||||| |||||||||||||||||  |||||| || |||||||||||    
48933286 aattttatggaagggtaattttatcattttgaggtgcaaccatgattaatcagggtgtaattagaaaaactc 48933215  T

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Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 41712845 - 41712763
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaa 83  Q
    |||||| ||||| |||||||||| |||| ||||  ||||||||||||||||||||| ||||||  |||||| || ||||||||    
41712845 ctttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaa 41712763  T

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Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9640891 - 9640976
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| ||||||||| |||||||||| |||||||||| || |||||||| |||| |  |||||| || |||||||||||    
9640891 ctttttgaaaattaaattttataaaagggtaattttgtcattttaggatgcaaccaggattgaaaagggtgtaattagaaaaactc 9640976  T

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Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17605812 - 17605727
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| || |||||| |||||||||| ||||||||||| |||||   |||||| || |||||||||||    
17605812 ctttttgaaaattaaattttatggaaaggtaattttgtcattttagggtgcaaccaggattacacagggtgtaattagaaaaactc 17605727  T

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Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26307931 - 26307846
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||  |||||||||| ||||||  |||||| || |||||||||||    
26307931 ctttttgaaaattaaattttatggaaggataattttgtcattttaaggtgcaaccaagattaaacagggtgtaattagaaaaactc 26307846  T

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Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 51002031 - 51002116
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||| |||||||| || ||||||  |||||  || |||||||||||    
51002031 ctttttgaaaattaaattttatgaaaggataattttgtcattttagggtgcaatcaggattaaacagggtataattagaaaaactc 51002116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 13146093 - 13146021
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    ||||||||| ||| ||||| |||||||||| ||||||||||| ||||||  |||||| || ||||||||||||    
13146093 aattttatggaagagtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactca 13146021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 17474749 - 17474665
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaact 85  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||| || |||||||| ||||||  ||| || || ||||||||||    
17474749 ctttttgaaaattaaattttatgaaaggataattttgtcattttaggatgcaaccaggattaaagaggatgtaattagaaaaact 17474665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 32086565 - 32086482
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||| ||||| |||||||||| |||| ||||  |||||||||||||||||| || ||||||  |||||| || |||||||||||    
32086565 ttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaatcaggattaaacagggtgtaattagaaaaactc 32086482  T

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Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 35273911 - 35273820
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaac 92  Q
    |||||| ||||| |||||||||| |||| ||||  ||||||||| || |||||||| ||||||  | |||  || |||||||||||||||||    
35273911 ctttttgaaaattaaattttatggaaggataattctgtcattttaggatgcaaccaggattaaacaaggtttaattagaaaaactcaaaaac 35273820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8114904 - 8114966
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| ||||||| || |||| |||| |||||||||| ||||||||||| ||||||    
8114904 ctttttgaaaattaaattttctggaaggataattttgtcattttagggtgcaaccaggattaa 8114966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 6016614 - 6016702
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaa 90  Q
    ||||||||||| |||||||||  || | |||| ||||||||||    |||||||| ||||||  |||||| || |||||||||||||||    
6016614 tttttaaaaattaaattttatagaatgataattttgtcattttaaaatgcaaccaggattaaacagggtgtaattagaaaaactcaaaa 6016702  T

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Target: scaffold0391 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3960 - 3875
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
3960 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 3875  T

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Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39540414 - 39540499
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
39540414 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 39540499  T

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Target: chr4; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42724194 - 42724279
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
42724194 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 42724279  T

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Target: chr4; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52913206 - 52913291
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
52913206 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 52913291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 53875123 - 53875208
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
53875123 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 53875208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 55219952 - 55219867
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
55219952 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 55219867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 56362902 - 56362818
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
56362902 tttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 56362818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10542045 - 10542132
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
10542045 ctttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 10542132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 613908 - 613822
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
613908 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactggggtgcaagtagaaaaactca 613822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20434247 - 20434161
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
20434247 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaagtagggtgcaagtagaaaaactca 20434161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 53036035 - 53036113
Alignment:
8 aaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
53036035 aaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 53036113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 55215606 - 55215691
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
55215606 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 55215691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28406451 - 28406537
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
28406451 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaaggagaaaaactca 28406537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19874135 - 19874220
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
19874135 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaagtagggtgcaagtagaaaaactc 19874220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23895208 - 23895293
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
23895208 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 23895293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42348745 - 42348660
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
42348745 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactc 42348660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 55183540 - 55183625
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
55183540 ctttttgaaaatcaaattttatgaaagagtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 55183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 20737762 - 20737690
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
20737762 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 20737690  T

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Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43830230 - 43830320
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||    
43830230 ctttttgaaaatcaaattttatgaaagggtaatattgtcattttgaggtgcaaccatgattaactagggtgcaaggagaaaaactctaaaa 43830320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37234218 - 37234303
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
37234218 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccataattaactaaggtgcaagtagaaaaactc 37234303  T

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Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38291868 - 38291953
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
38291868 ctttttgaaaatcaaattttatgaaaggttaatcttgtcattttttggtgcaaccatgattaactagggtgcaagtagaaaaactc 38291953  T

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Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52839745 - 52839830
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
52839745 ctttttgaaaatcaaattttatgaaagggtaattttgtcgttttggggtgcaaccatgattaactaggatgcaagtagaaaaactc 52839830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 56018719 - 56018791
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
56018719 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtagaaaaactc 56018791  T

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Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25857625 - 25857541
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
25857625 ctttttgaaaatcaaattttatgaaaaggtaatcttgtcattttggggtgcaaccatgatt-attagggtgcaagtagaaaaactc 25857541  T

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Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 52307470 - 52307557
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| ||||| ||||||||||||||| ||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||    
52307470 ctttttgaaaattaaattttatgaaaggataatcttatcattttaggatgcaaccatgattaactagggtgtaagtagaaaaactcaa 52307557  T

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Target: chr4; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 31709787 - 31709715
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||| ||||| |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||    
31709787 aaattttataaaaggataatcttgtcattttaaggtgcaaccatgattaattagggtgcaagtagaaaaactc 31709715  T

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Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28803981 - 28804068
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||| |||| |||||||||||||  ||||||||| |||||||||||||    
28803981 ctttttgaaaattaaattttatggaagggtaattttgtcattttagggtacaaccatgattaaacagggtgcaattagaaaaactcaa 28804068  T

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Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 47467420 - 47467506
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||||||||||  |||||||||| ||||||||| ||||||||||||| |||||||||||||||  |||||| || ||||||||||||    
47467420 ctttttaaaaactaaattttatggaagggtaattttgtcattttgggatgcaaccatgattaaacagggtgtaattagaaaaactca 47467506  T

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Target: chr4; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43458404 - 43458489
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||  |||||| || || ||||||||    
43458404 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccatgattaaacagggtgtaattataaaaactc 43458489  T

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Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24034603 - 24034513
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||| |||||||||| ||||||||| ||||||||||||||| ||||||  |||||  |||||| || ||||||||||||||||    
24034603 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggtacaaccagaattaaacagggtgtaattagaaaaactcaaaaa 24034513  T

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Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35339657 - 35339742
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||  | |||| || |||||||||||    
35339657 ctttttgaaaattaaattttatggaagggtaatcttgtcattttagggtgcaaccaggattaaacatggtgtaattagaaaaactc 35339742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 22301759 - 22301843
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactca 87  Q
    |||| ||||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||  ||||||  | ||||||||||||    
22301759 tttttaaaattaaattttatgaaagggtaattttgttattttggggtgcaaccaggattaaacagggtgtgattagaaaaactca 22301843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 49338 - 49400
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||||||||| |||||||||||||||||||| |||||||||| | ||||||||| ||||||    
49338 ctttttaaaaattaaattttatgaaagggtaattttgtcattttagagtgcaaccaagattaa 49400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22847189 - 22847104
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| ||||||||||||| | ||||  ||||||||||||||||||||| ||||||  |||||| || |||||||||||    
22847189 ctttttgaaaattaaattttatgaaaagataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactc 22847104  T

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Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 48990430 - 48990345
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| ||||||||| || ||||||| ||||||||| | |||||| ||||||| || |||||||||||    
48990430 ctttttgaaaattaaattttatggaagggtaattttatcattttagggtgcaacgaggattaaatagggtgtaattagaaaaactc 48990345  T

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Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40430207 - 40430145
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||| ||||||||||| ||||||    
40430207 ctttttgaaaattaaattttatggaagggtaattttgtcattttagggtgcaaccaggattaa 40430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 13962504 - 13962577
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    ||||||||| || |||||| |||||||||||||||||||| | ||||||  |||||| || |||||||||||||    
13962504 aattttatggaaaggtaattttgtcattttggggtgcaactaggattaaacagggtgtaattagaaaaactcaa 13962577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24897070 - 24896985
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||| | |||||||||||||| ||||| |||||||||||||||| ||||| ||||||  | |||| || |||||||||||    
24897070 ctttttgaaacttaaattttatgaaagagtaattttgtcattttggggtgtaaccaggattaaacaaggtgtaattagaaaaactc 24896985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 8713307 - 8713247
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||| ||| | ||||||    
8713307 tttttaaaattaaattttatgaaagggtaattttgtcattttggggtgtaacaaggattaa 8713247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 41202360 - 41202443
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||| ||||| |||||||||| |||| ||||  ||||||||||||||||||||| ||||||  | |||| || |||||||||||    
41202360 ttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacatggtgtaattagaaaaactc 41202443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 43621588 - 43621674
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    ||||| ||||| ||||||||| ||||| |||| |||||||||| || ||||| || ||||||  |||||| || |||||||||||||    
43621588 tttttgaaaattaaattttataaaaggataattttgtcattttaggatgcaatcaggattaaaaagggtgtaattagaaaaactcaa 43621674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 51322734 - 51322672
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 63  Q
    |||||| ||||| ||||||||||||||| |||| || |||||||| |||||||||| ||||||    
51322734 ctttttgaaaattaaattttatgaaaggataattttatcattttgaggtgcaaccaagattaa 51322672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1522868 - 1522783
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| ||| ||||| |||||||||| || |||||||| ||||||  |||||  || |||||||||||    
1522868 ctttttgaaaattaaattttatggaagagtaattttgtcattttaggatgcaaccaggattaaacagggtataattagaaaaactc 1522783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3026466 - 3026378
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    |||||| ||||| |||||||||| ||||||||| |||||||||| || ||||| || |||| |  |||||  || ||||||||||||||    
3026466 ctttttgaaaattaaattttatggaagggtaattttgtcattttaggatgcaatcaggatttaacagggtttaattagaaaaactcaaa 3026378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11682293 - 11682233
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgatt 61  Q
    |||||| ||||| ||||||||||||||| |||| || ||||||| ||||||||||| ||||    
11682293 ctttttgaaaattaaattttatgaaaggataattttatcattttagggtgcaaccaggatt 11682233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11690572 - 11690512
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgatt 61  Q
    |||||| ||||| ||||||||||||||| |||| || ||||||| ||||||||||| ||||    
11690572 ctttttgaaaattaaattttatgaaaggataattttatcattttagggtgcaaccaggatt 11690512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 50561635 - 50561564
Alignment:
15 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||| ||||||||| |||||||||| | ||||||||| ||||||  || ||| || |||||||||||    
50561635 aattttatggaagggtaattttgtcattttagagtgcaaccaggattaaacagagtgtaattagaaaaactc 50561564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51322402 - 51322489
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| ||||| |||||||||| ||||||||| || || ||||||| ||||||||  |||||  || ||| || |||||||||||||    
51322402 ctttttgaaaattaaattttatggaagggtaattttatccttttgggatgcaaccagaattaaacagagtgtaattagaaaaactcaa 51322489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 37683276 - 37683362
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    |||| ||||| ||||||||||||| | |||| ||| |||||||| ||| ||||| ||||||  ||||||  | ||||||||||||||    
37683276 tttttaaaattaaattttatgaaatgataattttgacattttggagtgtaaccaggattaaacagggtgtgattagaaaaactcaaa 37683362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 47429844 - 47429927
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||||||||| || ||||||||||| ||||| || ||||||| || |||||||| |||||| |||  || || |||||||||||    
47429844 tttttaaaaattaa-ttttatgaaagagtaattttatcattttaggatgcaaccaggattaaatagaatgtaattagaaaaactc 47429927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13947 - 13862
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
13947 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactc 13862  T

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Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3094673 - 3094588
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
3094673 ctttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 3094588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29630495 - 29630580
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
29630495 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtaaaaaaactc 29630580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6167935 - 6168022
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 88  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
6167935 ctttttgaaaatcaaattttatgaaaggttaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactcaa 6168022  T

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Target: chr6; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 13889957 - 13890042
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
13889957 ctttttgaaaatcaaattttatgaaagggtaatcttgttattttggggtgcaaccatgattaattagggtgcaagtagaaaaactc 13890042  T

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Target: chr6; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18893760 - 18893675
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
18893760 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaactagggtgcaagtagaaaaactc 18893675  T

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Target: chr6; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25335137 - 25335222
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
25335137 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactc 25335222  T

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Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29122353 - 29122440
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagg--gtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
29122353 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgtgcaagtagaaaaactc 29122440  T

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Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6625443 - 6625358
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
6625443 ctttttgaaaatcaaattttatgaaaggataatcttgtcattttagggtgcaaccatgattaactagggtgtaagtagaaaaactc 6625358  T

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Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 7141348 - 7141263
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
7141348 ctttttgaaaatcaaattttatgaaaggataatcttgttattttggggtgcaactatgattaactagggtgcaagtagaaaaactc 7141263  T

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Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6925862 - 6925777
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||| ||||||||| ||||||||||||||||||| || ||||||  |||||| || |||||||||||    
6925862 ctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaatcaggattaaacagggtgtaattagaaaaactc 6925777  T

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Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 31091151 - 31091229
Alignment:
8 aaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||  | |||| || |||||||||||    
31091151 aaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacatggtgtaattagaaaaactc 31091229  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 23350439 - 23350349
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||| |||||||||| |||| |||| |  ||||||||||||||||||| ||||||  |||||| || ||||||||||| ||||    
23350439 ctttttgaaaattaaattttatggaaggataatttgatcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactctaaaa 23350349  T

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Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11369079 - 11369164
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||| |||||||||  ||| ||||| ||||||||||| |||||||||| ||||||  |||||| || |||||||||||    
11369079 ctttttgaaaattaaattttatagaagagtaattttgtcattttgaggtgcaaccaagattaaacagggtgtaattagaaaaactc 11369164  T

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Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34085843 - 34085904
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgatta 62  Q
    |||||| ||||| |||||||||| |||| |||| |||||||||||||||||||||| |||||    
34085843 ctttttgaaaattaaattttatggaaggataattttgtcattttggggtgcaaccaggatta 34085904  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8525610 - 8525520
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    |||||| ||||| |||||||||| ||||||||| || |||||||||| ||||||||  |||||  || ||| || ||||||||||| ||||    
8525610 ctttttgaaaattaaattttatggaagggtaattttatcattttgggatgcaaccagaattaaacagtgtgtaattagaaaaactccaaaa 8525520  T

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Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5714962 - 5714907
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaacca 56  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||  |||||||||    
5714962 ctttttgaaaattaaattttatgaaagggtaattttgttattttgaagtgcaacca 5714907  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8811302 - 8811357
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaacca 56  Q
    |||||| |||||||||||||||| |||| |||| || ||||||||||||| |||||    
8811302 ctttttcaaaatcaaattttatgtaaggataattttatcattttggggtgtaacca 8811357  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 32173711 - 32173794
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaact 85  Q
    ||||| ||||| ||||||||| ||| |||||| ||||||||||||| || |||||  |||||  |||||| || ||||||||||    
32173711 tttttgaaaattaaattttataaaatggtaattttgtcattttgggatgtaaccagaattaaacagggtgtaattagaaaaact 32173794  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 14029054 - 14029090
Alignment:
186 aaggattctggtcctaataattatcacacaaattatc 222  Q
    |||||||||| ||||||||||||| ||||||||||||    
14029054 aaggattctgatcctaataattattacacaaattatc 14029090  T

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Target: scaffold0248 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3023 - 3108
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
3023 ctttttgaaaatcaaattttataaaagggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 3108  T

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Target: scaffold0065 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 38424 - 38501
Alignment:
14 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 91  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
38424 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactcaaaaa 38501  T

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Target: scaffold0007 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 157114 - 157199
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
157114 ctttttgaaaatcaaattttatgaaagggtaatcttgtcattttttggtgcaaccatgattaactagggtgcaagtagaaaaactc 157199  T

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Target: scaffold0007; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 200117 - 200030
Alignment:
2 tttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcaaa 89  Q
    ||||| ||||| |||||||||| ||||||||| ||||||||||||| |||| ||| ||||||  ||| || || || |||||||||||    
200117 tttttgaaaattaaattttatggaagggtaattttgtcattttgggatgcatccaggattaaacaggatgtaattaaaaaaactcaaa 200030  T

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Target: scaffold0896 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3749 - 3804
Alignment:
1 ctttttaaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaacca 56  Q
    |||||| |||||||||||||||| |||| |||| || ||||||||||||| |||||    
3749 ctttttcaaaatcaaattttatgtaaggataattttatcattttggggtgtaacca 3804  T

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Target: scaffold0294 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 12592 - 12548
Alignment:
3 ttttaaaaatcaaattttatgaaagggtaatcttgtcattttggg 47  Q
    |||||||||| ||||||||||||| |||||| ||||||| |||||    
12592 ttttaaaaattaaattttatgaaaaggtaattttgtcatattggg 12548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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