View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14696_low_12 (Length: 251)
Name: NF14696_low_12
Description: NF14696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14696_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 39794365 - 39794584
Alignment:
| Q |
13 |
attattctctcgtattaatgcgatgtcatttagctttgttttgtcacttttaagtgaaaaatacataacaaacgattgtcattacacaataacctaacac |
112 |
Q |
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| T |
39794365 |
attattctctcgtattaatgcgatgtcatttagctttgttttgtcacttttaagtgaaaaatacataacaaacgattgtcattacacaataacctaacac |
39794464 |
T |
|
| Q |
113 |
acattttacataaggaaatttggagttttgccaatggacaaccggtgtaaccagttaccaagtaaaaagtcattttatgggcaagctatctaactggtaa |
212 |
Q |
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| T |
39794465 |
acattttacataaggaaatttggagttttgccaatgaacaaccggtgtaaccggttaccaagtaaaaagtcattttatgggcaagctatctaactggtaa |
39794564 |
T |
|
| Q |
213 |
ccggttacctgtccctaaac |
232 |
Q |
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||||||||||||||| |||| |
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| T |
39794565 |
ccggttacctgtcccaaaac |
39794584 |
T |
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