View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14696_low_7 (Length: 338)
Name: NF14696_low_7
Description: NF14696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14696_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 12 - 322
Target Start/End: Original strand, 2750080 - 2750390
Alignment:
| Q |
12 |
atgaattggatgaaatagtttaggcacaaactgagacttagtcactaagaaaatcagagataaacgatgcttgaaaacaaattcactttgatatcactgc |
111 |
Q |
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| T |
2750080 |
atgaattggatgaaatagtttaggcacaaactgagacttagtcactaagaaaaccagagataaacgatgcttgaaaacaaatccactttgatatcactgc |
2750179 |
T |
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| Q |
112 |
tacacattgttaggttttggtctcaacaaagtgtaaagacttgaaactatgatagtttctcctatttctaactaaaaaggattattaacgtcgggaataa |
211 |
Q |
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| T |
2750180 |
tacacattgttaggttttggtctcaacaaagtgtaaagacttgaaactatgatagtttctcctatttctaactaacaaggattattaacgtcgggaataa |
2750279 |
T |
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| Q |
212 |
aatgagaccaacgactagtctggaaaatggctacaacatagatagtaataatggaattaaaggaaccgaaatcacattgccaactaaacaaggcatcaaa |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2750280 |
aatgagaccaacgactagtctggaaaatggctacaacatagacagtaataatggaattaaaggaaccgaaatcacattgccaactaaacaaggcatcaaa |
2750379 |
T |
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| Q |
312 |
catcatgtcca |
322 |
Q |
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||||||||||| |
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| T |
2750380 |
catcatgtcca |
2750390 |
T |
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