View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14698_low_7 (Length: 272)
Name: NF14698_low_7
Description: NF14698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14698_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 31280983 - 31280742
Alignment:
| Q |
20 |
agttccaaacagaatcatactctattgtgttgaagtgtataagagactttacctgaaagcatccacatatttgaatagctgcaaataaatttgccataac |
119 |
Q |
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| T |
31280983 |
agttccaaacagaatcatactctattgtgttgtagtgtataagagactttacctgaaagcatccacatatttgaatagctgcaaataaatttgccataac |
31280884 |
T |
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| Q |
120 |
aacagtccattctggaatggaaagagaagctaaaatgtaaggttggacttgtgatccaaaagcccaatatccacagaaagccaactgccagtaactcaaa |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31280883 |
aacagtccattctggaatggaaagagaagctaaaatgtaaggttggacttgtgatccaaaagcccaatatccacagaaagccaactgccagtaactcaaa |
31280784 |
T |
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| Q |
220 |
actatcacagtgtatgctgctgatatgcttttatacatattc |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
31280783 |
actatcacagtgtatgctgctgatatgcttttatacatattc |
31280742 |
T |
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