View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1469_low_31 (Length: 259)
Name: NF1469_low_31
Description: NF1469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1469_low_31 |
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Alignment Details
Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 99 - 244
Target Start/End: Complemental strand, 43382943 - 43382798
Alignment:
| Q |
99 |
tcagattttatttaagcacaaacaaaaatcgagttgtagagagaggttgataaaatccaatttgatgactcttccagggtatttttattttgagagtaat |
198 |
Q |
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| T |
43382943 |
tcagattttatttaagcacaaacaaaaatcgagttgtagagagaggttgataaaatccaatttgatgactcttccagggtatttttattttgagagtaat |
43382844 |
T |
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| Q |
199 |
tatgagctatgatgtaattttggtgcgacacattttattttgtttt |
244 |
Q |
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| T |
43382843 |
tatgagctatgatgtaattttggtgcgacacattttattttgtttt |
43382798 |
T |
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