View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1469_low_9 (Length: 418)
Name: NF1469_low_9
Description: NF1469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1469_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 4 - 403
Target Start/End: Complemental strand, 13300251 - 13299855
Alignment:
| Q |
4 |
acagaacagaagctccagtattcaatttgatcatgttttcttcaagtatccgaccaaccacgtgaacaatacttattccagtcacgtgttagatttactt |
103 |
Q |
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| T |
13300251 |
acagaacagaagctccagtattcaattagatcatgttttcttcaagtatccgaccaaccacgtgaacaatacttattccagtcacgtgttagatttactt |
13300152 |
T |
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| Q |
104 |
ttcgcacataaaaaacgtgagtaaatagaatgaacggttcacacaattcacaaagttacttttattttaagatgagatatcaaagtcctttgtttcctta |
203 |
Q |
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| T |
13300151 |
ttcgcacataaaaaacgtgagtaaatagaatgaacggttcacacaattcacaaagttacttttattttaagatgagatatcaaagtcctttgtttcctta |
13300052 |
T |
|
| Q |
204 |
ataaggtatagcagaatccaaggacaagtctattgagtcaccttctataccctttgtttgaataagtgttagagattttttaactaaagttcaagtttgg |
303 |
Q |
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| T |
13300051 |
ataaggtatagcagaatccaaggacaagtctattgagtcaccttctataccctttgtttgaataagtgttagagattttttaactaaagttcaagtttgg |
13299952 |
T |
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| Q |
304 |
tacaccatgatcaatgctttttctctatactatgctgtcattggcctaacttcatgttctcactaacgacaaagtttatctgttggaatcacaaacaagt |
403 |
Q |
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| T |
13299951 |
tacaccatg---aatgcttttgctctatactgtgctgtcattggcctaacttcatgttctcactaacgacaaagtttatcagttggaatcacaaacaagt |
13299855 |
T |
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