View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1470-Insertion-14 (Length: 308)
Name: NF1470-Insertion-14
Description: NF1470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1470-Insertion-14 |
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Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 8 - 306
Target Start/End: Complemental strand, 51111322 - 51111023
Alignment:
| Q |
8 |
atatcatcatatatgggagtagtaatctttttctttgttttgttgtttgctagtgctgtgtttggtctctcatgatagcaaccacatagcacatgtcaga |
107 |
Q |
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| T |
51111322 |
atatcatcatatatgggagtagtaatctttttctttgttttgttgtttgctagtgctgtgtttggtctctcatgatagcaaccacatagcacaagtcaga |
51111223 |
T |
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| Q |
108 |
acattttgtgtcaagtcgaatatgtttttgtttcttaagagcttaaaaaataatagtcaccattccccctatatatactccaatttgtatgaataatcta |
207 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
51111222 |
acattttgtatcaagtcgaatatgtttttgtttcttaagagcttaaaaaataatagtcaccattccccctatatatactccaatttgtatgaataattta |
51111123 |
T |
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| Q |
208 |
tttttatgtaccaaaatat-attaattatgaatttcatttctaaattgttaacataannnnnnnacacatacattcattcaaatctttttatattgtatt |
306 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |
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| T |
51111122 |
tttttatgtaccaaaatataattaattatgaatttcatttctaaattgttaacataatttttttaaacatacattcattcaaatctttttatattgtatt |
51111023 |
T |
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