View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1470-Insertion-3 (Length: 1030)

Name: NF1470-Insertion-3
Description: NF1470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1470-Insertion-3
NF1470-Insertion-3
[»] chr7 (58 HSPs)
chr7 (8-765)||(36772220-36772984)
chr7 (21-246)||(36770497-36770727)
chr7 (799-1016)||(36772003-36772223)
chr7 (512-679)||(22119911-22120090)
chr7 (512-679)||(40542909-40543088)
chr7 (512-678)||(7275300-7275478)
chr7 (512-679)||(2751294-2751473)
chr7 (512-679)||(21835174-21835353)
chr7 (512-679)||(7175861-7176040)
chr7 (512-679)||(11997872-11998051)
chr7 (512-678)||(18044130-18044308)
chr7 (531-679)||(654704-654863)
chr7 (512-679)||(22703509-22703688)
chr7 (512-679)||(27312175-27312354)
chr7 (512-602)||(23012595-23012686)
chr7 (512-679)||(28089839-28090021)
chr7 (521-678)||(17196950-17197119)
chr7 (512-679)||(21217832-21218011)
chr7 (512-602)||(2103078-2103169)
chr7 (512-602)||(10091211-10091302)
chr7 (512-672)||(17212076-17212248)
chr7 (512-602)||(27009382-27009473)
chr7 (529-679)||(29861711-29861872)
chr7 (521-602)||(9683858-9683940)
chr7 (521-602)||(42814896-42814978)
chr7 (512-602)||(7799919-7800010)
chr7 (512-602)||(13332510-13332601)
chr7 (529-679)||(16374034-16374196)
chr7 (512-602)||(19421254-19421345)
chr7 (512-679)||(31197614-31197792)
chr7 (512-679)||(42913512-42913691)
chr7 (521-679)||(31273946-31274115)
chr7 (521-602)||(32849623-32849705)
chr7 (521-678)||(39145652-39145821)
chr7 (522-602)||(14199753-14199834)
chr7 (512-679)||(2344322-2344501)
chr7 (599-678)||(3851878-3851958)
chr7 (567-679)||(23092175-23092298)
chr7 (512-602)||(27704025-27704116)
chr7 (619-678)||(31712902-31712961)
chr7 (512-585)||(22299872-22299946)
chr7 (546-678)||(41907514-41907657)
chr7 (521-603)||(22696352-22696433)
chr7 (512-671)||(43785306-43785477)
chr7 (525-602)||(9718074-9718152)
chr7 (633-679)||(22299958-22300004)
chr7 (529-602)||(28950911-28950985)
chr7 (629-678)||(22696473-22696522)
chr7 (628-677)||(32849742-32849791)
chr7 (566-602)||(21373788-21373824)
chr7 (599-677)||(22638409-22638488)
chr7 (628-667)||(25333554-25333593)
chr7 (521-599)||(28647001-28647079)
chr7 (632-671)||(36395501-36395540)
chr7 (512-600)||(12211625-12211713)
chr7 (525-603)||(21574189-21574268)
chr7 (512-561)||(23854419-23854468)
chr7 (702-731)||(36772254-36772283)
[»] chr6 (29 HSPs)
chr6 (521-679)||(14212920-14213080)
chr6 (512-679)||(3222635-3222812)
chr6 (521-678)||(654146-654315)
chr6 (512-679)||(15360097-15360276)
chr6 (512-679)||(34147365-34147544)
chr6 (512-679)||(34159981-34160160)
chr6 (512-678)||(11448890-11449068)
chr6 (512-679)||(21148510-21148688)
chr6 (512-677)||(9238994-9239171)
chr6 (512-602)||(17081141-17081232)
chr6 (521-678)||(28672095-28672264)
chr6 (512-679)||(21982320-21982498)
chr6 (512-602)||(5360158-5360249)
chr6 (521-679)||(1344963-1345133)
chr6 (512-602)||(12591656-12591747)
chr6 (525-678)||(9690638-9690803)
chr6 (512-679)||(9843957-9844136)
chr6 (512-598)||(13753259-13753346)
chr6 (533-602)||(12390465-12390535)
chr6 (521-600)||(9208280-9208359)
chr6 (531-678)||(11840939-11841097)
chr6 (512-598)||(28968133-28968220)
chr6 (512-679)||(11007184-11007363)
chr6 (521-678)||(33718469-33718627)
chr6 (512-599)||(31039039-31039127)
chr6 (521-600)||(17149546-17149625)
chr6 (628-668)||(20836970-20837010)
chr6 (628-678)||(5360071-5360121)
chr6 (512-596)||(33499493-33499578)
[»] chr5 (50 HSPs)
chr5 (512-679)||(19456210-19456387)
chr5 (512-679)||(8484660-8484839)
chr5 (521-678)||(11926501-11926671)
chr5 (522-679)||(27498730-27498899)
chr5 (521-671)||(38684236-38684397)
chr5 (521-679)||(18207235-18207405)
chr5 (522-671)||(11464915-11465075)
chr5 (512-679)||(7085625-7085804)
chr5 (512-679)||(15641105-15641283)
chr5 (512-671)||(33709510-33709679)
chr5 (512-679)||(38630978-38631139)
chr5 (512-679)||(32059439-32059618)
chr5 (512-679)||(22392720-22392886)
chr5 (512-602)||(25586951-25587042)
chr5 (564-671)||(35425085-35425203)
chr5 (512-602)||(37495066-37495157)
chr5 (522-602)||(34310171-34310252)
chr5 (521-670)||(13038463-13038623)
chr5 (512-679)||(30485847-30486026)
chr5 (521-679)||(10869564-10869734)
chr5 (512-670)||(13108458-13108627)
chr5 (599-679)||(41351103-41351183)
chr5 (512-602)||(1827617-1827708)
chr5 (512-679)||(4603796-4603975)
chr5 (525-670)||(27487562-27487720)
chr5 (512-602)||(15971209-15971300)
chr5 (521-599)||(36954846-36954925)
chr5 (601-678)||(22693054-22693132)
chr5 (512-600)||(7151348-7151437)
chr5 (511-602)||(6014367-6014459)
chr5 (512-679)||(31287945-31288124)
chr5 (619-679)||(37495192-37495252)
chr5 (628-679)||(10631288-10631339)
chr5 (512-602)||(12398535-12398626)
chr5 (521-603)||(19145498-19145580)
chr5 (521-678)||(42193513-42193680)
chr5 (521-600)||(15931087-15931166)
chr5 (521-679)||(21236361-21236531)
chr5 (512-678)||(23270522-23270700)
chr5 (628-678)||(28614486-28614536)
chr5 (524-596)||(15485385-15485457)
chr5 (512-564)||(37397732-37397784)
chr5 (599-678)||(5049254-5049333)
chr5 (522-592)||(12317247-12317318)
chr5 (619-678)||(19145412-19145471)
chr5 (628-679)||(25548533-25548584)
chr5 (512-601)||(22253233-22253323)
chr5 (512-562)||(34049841-34049891)
chr5 (628-678)||(34310289-34310339)
chr5 (610-667)||(5067390-5067447)
[»] chr3 (65 HSPs)
chr3 (512-679)||(15566499-15566677)
chr3 (521-678)||(52821636-52821804)
chr3 (512-679)||(10190741-10190920)
chr3 (512-679)||(10083818-10083997)
chr3 (512-679)||(25289714-25289892)
chr3 (512-678)||(49258262-49258440)
chr3 (512-679)||(53424176-53424354)
chr3 (512-678)||(35492930-35493108)
chr3 (512-679)||(30807152-30807331)
chr3 (521-678)||(39041852-39042021)
chr3 (512-679)||(8456149-8456328)
chr3 (512-679)||(45272415-45272594)
chr3 (512-679)||(46576367-46576546)
chr3 (512-679)||(53233910-53234088)
chr3 (512-670)||(25379780-25379950)
chr3 (512-679)||(26174132-26174311)
chr3 (512-679)||(40133448-40133627)
chr3 (512-602)||(26108311-26108402)
chr3 (512-679)||(45529754-45529932)
chr3 (512-602)||(40940844-40940935)
chr3 (521-679)||(48977416-48977586)
chr3 (521-670)||(18176895-18177056)
chr3 (521-678)||(21362971-21363140)
chr3 (533-679)||(8097278-8097436)
chr3 (512-602)||(31537925-31538016)
chr3 (521-679)||(52455648-52455818)
chr3 (521-602)||(7470302-7470384)
chr3 (599-679)||(24165714-24165794)
chr3 (512-671)||(30257643-30257814)
chr3 (512-602)||(34492662-34492753)
chr3 (521-678)||(7485531-7485694)
chr3 (521-602)||(29915356-29915438)
chr3 (521-602)||(29964509-29964591)
chr3 (521-678)||(32151452-32151621)
chr3 (521-589)||(19857079-19857148)
chr3 (619-679)||(53848433-53848493)
chr3 (619-678)||(24407399-24407458)
chr3 (521-679)||(25344057-25344226)
chr3 (521-671)||(33398475-33398637)
chr3 (546-679)||(2511296-2511441)
chr3 (525-602)||(51532821-51532899)
chr3 (522-598)||(1692863-1692940)
chr3 (630-679)||(3747730-3747779)
chr3 (512-671)||(26158837-26159001)
chr3 (599-678)||(54475798-54475878)
chr3 (528-602)||(53288799-53288874)
chr3 (628-678)||(4048097-4048147)
chr3 (522-599)||(6041762-6041840)
chr3 (521-602)||(11390630-11390712)
chr3 (521-594)||(25017543-25017617)
chr3 (525-586)||(40777052-40777114)
chr3 (546-602)||(17579223-17579280)
chr3 (622-679)||(32094756-32094813)
chr3 (599-679)||(1178289-1178368)
chr3 (567-603)||(1242048-1242084)
chr3 (598-678)||(4462749-4462829)
chr3 (599-670)||(55371302-55371374)
chr3 (619-678)||(50731237-50731296)
chr3 (619-678)||(50781558-50781617)
chr3 (628-670)||(4252404-4252446)
chr3 (631-677)||(48105027-48105073)
chr3 (512-604)||(4252482-4252574)
chr3 (599-679)||(33698705-33698786)
chr3 (512-596)||(49167075-49167160)
chr3 (522-602)||(55287832-55287913)
[»] chr1 (55 HSPs)
chr1 (521-677)||(17935797-17935965)
chr1 (512-679)||(4621236-4621415)
chr1 (512-678)||(24122042-24122220)
chr1 (512-671)||(24674412-24674583)
chr1 (512-679)||(7578428-7578607)
chr1 (521-679)||(7766726-7766896)
chr1 (522-679)||(15059401-15059570)
chr1 (512-671)||(45859050-45859221)
chr1 (512-602)||(8077666-8077757)
chr1 (521-602)||(30677204-30677286)
chr1 (521-602)||(46607838-46607920)
chr1 (512-679)||(27454863-27455044)
chr1 (512-602)||(9500442-9500533)
chr1 (512-602)||(37351548-37351639)
chr1 (512-679)||(23734135-23734315)
chr1 (512-679)||(23741327-23741507)
chr1 (521-596)||(46113495-46113571)
chr1 (512-678)||(7197247-7197424)
chr1 (512-602)||(7946863-7946954)
chr1 (521-602)||(36155975-36156057)
chr1 (512-599)||(33905600-33905688)
chr1 (512-677)||(34778361-34778535)
chr1 (521-599)||(25237080-25237158)
chr1 (521-671)||(1378926-1379087)
chr1 (521-602)||(23232352-23232434)
chr1 (512-596)||(18646872-18646957)
chr1 (521-596)||(809250-809325)
chr1 (512-679)||(32729564-32729742)
chr1 (512-602)||(168220-168311)
chr1 (521-602)||(8779823-8779905)
chr1 (521-602)||(18533811-18533893)
chr1 (524-601)||(39964543-39964621)
chr1 (521-596)||(2272372-2272448)
chr1 (523-602)||(21726759-21726839)
chr1 (627-678)||(5315477-5315528)
chr1 (632-679)||(14603947-14603994)
chr1 (60-135)||(16749153-16749228)
chr1 (546-603)||(16539661-16539718)
chr1 (521-582)||(20487297-20487359)
chr1 (628-678)||(23041669-23041719)
chr1 (600-678)||(26513148-26513226)
chr1 (601-679)||(27159205-27159283)
chr1 (600-678)||(40802069-40802147)
chr1 (512-603)||(1138598-1138689)
chr1 (524-603)||(37047023-37047102)
chr1 (521-603)||(19034473-19034555)
chr1 (619-670)||(40145889-40145940)
chr1 (559-602)||(40145973-40146016)
chr1 (571-602)||(45331709-45331740)
chr1 (628-670)||(8779744-8779786)
chr1 (619-677)||(37351454-37351512)
chr1 (599-679)||(8254751-8254832)
chr1 (522-602)||(32930778-32930859)
chr1 (599-679)||(48699876-48699957)
chr1 (524-600)||(49101730-49101806)
[»] chr8 (47 HSPs)
chr8 (512-679)||(39349279-39349458)
chr8 (512-679)||(4718668-4718847)
chr8 (512-679)||(34237654-34237833)
chr8 (512-679)||(19471632-19471812)
chr8 (512-679)||(19542556-19542736)
chr8 (512-679)||(19589960-19590140)
chr8 (512-677)||(28193497-28193674)
chr8 (511-679)||(8765525-8765705)
chr8 (512-679)||(3734622-3734801)
chr8 (512-678)||(21603253-21603431)
chr8 (521-678)||(42643118-42643287)
chr8 (512-679)||(2618209-2618388)
chr8 (512-679)||(14632977-14633156)
chr8 (511-678)||(20469939-20470117)
chr8 (512-679)||(42328028-42328206)
chr8 (521-679)||(32879311-32879481)
chr8 (521-602)||(15259493-15259575)
chr8 (521-602)||(27746422-27746504)
chr8 (512-602)||(264486-264577)
chr8 (512-602)||(651344-651435)
chr8 (512-602)||(837079-837170)
chr8 (512-598)||(18532130-18532217)
chr8 (599-679)||(2639410-2639491)
chr8 (521-677)||(7557952-7558112)
chr8 (512-679)||(20305931-20306110)
chr8 (512-679)||(21092564-21092743)
chr8 (521-679)||(4698722-4698892)
chr8 (521-602)||(26168936-26169017)
chr8 (521-602)||(2166731-2166811)
chr8 (546-602)||(6953094-6953151)
chr8 (599-678)||(25248469-25248547)
chr8 (512-603)||(34639294-34639384)
chr8 (521-602)||(24018414-24018496)
chr8 (599-678)||(18128634-18128714)
chr8 (521-584)||(15974937-15975000)
chr8 (512-602)||(34610774-34610865)
chr8 (521-602)||(9047365-9047447)
chr8 (632-678)||(9713609-9713655)
chr8 (521-602)||(28088318-28088400)
chr8 (524-586)||(40136938-40137000)
chr8 (521-601)||(28964065-28964146)
chr8 (619-678)||(2166838-2166897)
chr8 (567-602)||(21667629-21667664)
chr8 (632-679)||(33747037-33747084)
chr8 (632-679)||(34610686-34610733)
chr8 (628-678)||(6953008-6953057)
chr8 (520-584)||(34694681-34694746)
[»] chr4 (51 HSPs)
chr4 (512-679)||(40058851-40059030)
chr4 (521-679)||(34844757-34844927)
chr4 (512-677)||(52983638-52983815)
chr4 (512-676)||(20077986-20078162)
chr4 (512-679)||(27528794-27528973)
chr4 (512-679)||(32986216-32986395)
chr4 (512-679)||(46714411-46714591)
chr4 (512-678)||(33696279-33696457)
chr4 (548-678)||(34723854-34723996)
chr4 (521-671)||(43719094-43719234)
chr4 (512-679)||(19660531-19660710)
chr4 (512-602)||(25852233-25852324)
chr4 (521-670)||(49287886-49288046)
chr4 (512-679)||(54127341-54127520)
chr4 (512-602)||(22625157-22625248)
chr4 (521-602)||(13550236-13550318)
chr4 (512-679)||(5609201-5609380)
chr4 (525-677)||(20527035-20527198)
chr4 (512-678)||(20566368-20566547)
chr4 (512-602)||(35229187-35229277)
chr4 (525-679)||(36131509-36131675)
chr4 (546-679)||(32990488-32990633)
chr4 (521-602)||(33992654-33992736)
chr4 (512-599)||(1985855-1985943)
chr4 (546-669)||(9517650-9517785)
chr4 (512-679)||(44343533-44343712)
chr4 (512-602)||(35674828-35674919)
chr4 (521-602)||(12500145-12500227)
chr4 (522-679)||(45787703-45787871)
chr4 (621-678)||(55158343-55158400)
chr4 (547-679)||(18875516-18875659)
chr4 (521-599)||(13873385-13873464)
chr4 (512-602)||(32942389-32942480)
chr4 (619-669)||(4064998-4065048)
chr4 (628-678)||(23639771-23639821)
chr4 (628-678)||(23645429-23645479)
chr4 (512-601)||(34835548-34835638)
chr4 (522-602)||(2351042-2351123)
chr4 (634-679)||(21387486-21387531)
chr4 (521-602)||(51535641-51535727)
chr4 (512-599)||(7392054-7392141)
chr4 (512-603)||(41621683-41621774)
chr4 (567-602)||(29875862-29875897)
chr4 (619-678)||(52494626-52494685)
chr4 (567-602)||(55961840-55961875)
chr4 (525-602)||(13584341-13584419)
chr4 (619-671)||(37302625-37302677)
chr4 (619-678)||(25852353-25852412)
chr4 (628-671)||(35229315-35229358)
chr4 (525-587)||(37455609-37455671)
chr4 (630-679)||(23131435-23131484)
[»] chr2 (51 HSPs)
chr2 (521-678)||(25293194-25293356)
chr2 (512-679)||(44946052-44946231)
chr2 (512-679)||(33827572-33827751)
chr2 (524-679)||(35171831-35171998)
chr2 (512-602)||(10582077-10582168)
chr2 (521-679)||(15037987-15038157)
chr2 (522-602)||(17324795-17324876)
chr2 (512-679)||(34516413-34516586)
chr2 (512-678)||(11941210-11941388)
chr2 (512-602)||(27290607-27290698)
chr2 (512-678)||(13266509-13266686)
chr2 (521-679)||(41314020-41314189)
chr2 (512-599)||(1191532-1191620)
chr2 (512-679)||(36242311-36242490)
chr2 (512-679)||(24196023-24196200)
chr2 (525-678)||(30466830-30466995)
chr2 (567-679)||(3943815-3943938)
chr2 (567-679)||(28668948-28669071)
chr2 (512-599)||(44976244-44976332)
chr2 (521-656)||(32845119-32845251)
chr2 (512-599)||(5394036-5394124)
chr2 (512-602)||(4567524-4567615)
chr2 (512-602)||(43374412-43374503)
chr2 (521-598)||(8258925-8259003)
chr2 (586-679)||(14486929-14487023)
chr2 (619-679)||(2140485-2140545)
chr2 (511-602)||(19054043-19054135)
chr2 (628-679)||(4567428-4567479)
chr2 (512-602)||(45271403-45271494)
chr2 (546-599)||(23787098-23787152)
chr2 (601-678)||(4852649-4852726)
chr2 (512-603)||(8192438-8192529)
chr2 (619-679)||(18692098-18692158)
chr2 (619-679)||(19054164-19054224)
chr2 (619-679)||(39957896-39957956)
chr2 (512-590)||(6714380-6714459)
chr2 (512-591)||(18976524-18976603)
chr2 (628-679)||(43374329-43374380)
chr2 (521-602)||(40997437-40997519)
chr2 (512-600)||(28194223-28194311)
chr2 (512-600)||(40591202-40591290)
chr2 (630-671)||(45132436-45132477)
chr2 (619-671)||(18976462-18976514)
chr2 (512-599)||(19605936-19606023)
chr2 (567-602)||(918784-918819)
chr2 (619-678)||(27269344-27269403)
chr2 (636-679)||(27290729-27290772)
chr2 (528-602)||(36390655-36390730)
chr2 (628-678)||(44929846-44929896)
chr2 (630-679)||(1501463-1501511)
chr2 (512-604)||(29698166-29698258)
[»] scaffold0217 (1 HSPs)
scaffold0217 (512-678)||(7309-7487)
[»] scaffold0576 (1 HSPs)
scaffold0576 (512-679)||(5081-5260)
[»] scaffold0070 (1 HSPs)
scaffold0070 (512-679)||(40344-40522)
[»] scaffold0019 (1 HSPs)
scaffold0019 (512-679)||(161828-162007)
[»] scaffold0026 (1 HSPs)
scaffold0026 (512-678)||(97366-97544)
[»] scaffold0051 (1 HSPs)
scaffold0051 (512-679)||(52870-53049)
[»] scaffold0623 (1 HSPs)
scaffold0623 (512-602)||(1143-1234)
[»] scaffold0366 (2 HSPs)
scaffold0366 (512-602)||(9386-9477)
scaffold0366 (512-602)||(12087-12178)
[»] scaffold0102 (1 HSPs)
scaffold0102 (532-679)||(39131-39290)
[»] scaffold0459 (1 HSPs)
scaffold0459 (512-602)||(10780-10871)
[»] scaffold0068 (1 HSPs)
scaffold0068 (521-679)||(41644-41813)
[»] scaffold0717 (1 HSPs)
scaffold0717 (512-599)||(48-136)
[»] scaffold0328 (2 HSPs)
scaffold0328 (521-602)||(15019-15101)
scaffold0328 (567-678)||(13047-13166)
[»] scaffold0157 (1 HSPs)
scaffold0157 (521-602)||(20250-20332)
[»] scaffold0049 (1 HSPs)
scaffold0049 (512-678)||(66781-66951)
[»] scaffold0016 (1 HSPs)
scaffold0016 (569-679)||(32365-32485)
[»] scaffold0199 (2 HSPs)
scaffold0199 (619-678)||(8451-8510)
scaffold0199 (512-584)||(8512-8585)
[»] scaffold0020 (1 HSPs)
scaffold0020 (568-678)||(123066-123172)
[»] scaffold0460 (1 HSPs)
scaffold0460 (521-582)||(8286-8348)
[»] scaffold0200 (1 HSPs)
scaffold0200 (632-675)||(26605-26648)


Alignment Details
Target: chr7 (Bit Score: 576; Significance: 0; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 576; E-Value: 0
Query Start/End: Original strand, 8 - 765
Target Start/End: Complemental strand, 36772984 - 36772220
Alignment:
Q  8 ccctatattcttcaagtttcttatgatgcgagatgccgcaacttcttgtgtcaagggaatgttaattgggcaatagaatttgaaattagcatatagtttt 107  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36772984 ccctatatgcttcaagtttcttatgatgcgagatgctgcaacttcttgtgtcaagggaaggttaattgggcaatagaatttgaaattagcatatagtttt 36772885  T
Q  108 tcatgtggtgattttggttcatatgtgtctgttgttgggggatgaaggttttgaggttggtattctttgtgtagttccaagatttgccataaaagcattg 207  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  36772884 tcatgtggtgattttggttcatatgtgtctgttgttgggg-atgaaggttttgaagttggtattctttgtgtagttccaagatttgccataaaagctttg 36772786  T
Q  208 aaatggaaattggaaaatcaaagaatggatcaattgaaagagcttctgatgaacacaaaatttatttgagaaatttgttccaaatgttttccacaactta 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36772785 aaatggaaattggaaaatcaaagaatggatcaattgaaagagcttctgatgaacacaaaatttatttgagaaatttgttccaaatgttttccacaactta 36772686  T
Q  308 tgtggattagacttgtatctgtttaatgcttgatatacatatataaaatccagagaggacatcaaattcttcattcacgcagactttcaaaattaaattt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36772685 tgtggattagacttgtatctgtttaatgcttgatatacatatataaaatccagaggggacatcaaattcttcattcacgcagactttcaaaattaaattt 36772586  T
Q  408 aaaaacaagtcaaataatcttagaataatttgcaagtcaattttcgtttggcccttctagttgtctatattatagattattagtatcaactatattatag 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36772585 aaaaacaagtcaaataatcttagaataatttgcaagtcaattttcgtttggcccttctagttgtctatattatagattattagtgtcaactatattatag 36772486  T
Q  508 attattggc-ttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacaga------- 598  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||           
T  36772485 attattggctttttgatcttggagtttgctcctctagaggtctcaggtttgatttccccta-tgccaatttcggtgggctaagttcatacagagcttgct 36772387  T
Q  599 ---gctttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttcnnnnnnnnnnnngtt 694  Q
       ||||||||||||| ||||||||||||| | ||| ||| ||||||||||||||||||||| || ||||||||||| ||||||              ||    
T  36772386 ctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagtttt----aaaaaaaaaatt 36772291  T
Q  695 atatgtgccgacaatgtaaaatattttacattgtcggttgttaattacaaccgttaaatcaatataaatat 765  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  36772290 atatgtgccgacaatgtaaaatattttacattgtcggttgttaattacaaccattaaatcaataaaaatat 36772220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 21 - 246
Target Start/End: Complemental strand, 36770727 - 36770497
Alignment:
Q  21 aagtttcttatgatgcgagatgccgcaacttcttgtgtcaagggaatgttaattgggcaatagaatttgaaattagcatatagtttttcatgtggtgatt 120  Q
    ||||||||||||||||||||||| ||| | |||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  36770727 aagtttcttatgatgcgagatgctgcagcatcttgtgttaaggggatgttaattgggcaatagaatttgagatcagcatatagtttttcatgtggtgatt 36770628  T
Q  121 ttggttcatatgtgtctgttgttgggggatgaaggttttgagg---ttggta---ttctttgtgtagttccaagatttgccataaaagcattgaaatgga 214  Q
    ||||||| | |||||| |||||||||| |||||||||||||||   ||||||   |||||||||||||||||||||||||||| | |   ||||| || |    
T  36770627 ttggttcgtgtgtgtcagttgttgggg-atgaaggttttgaggaggttggtagtattctttgtgtagttccaagatttgccatgacacttttgaagtgaa 36770529  T
Q  215 aattggaaaatcaaagaatggatcaattgaaa 246  Q
    || || ||||||||||||||||||||||||||    
T  36770528 aactgaaaaatcaaagaatggatcaattgaaa 36770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 799 - 1016
Target Start/End: Complemental strand, 36772223 - 36772003
Alignment:
Q  799 atatgattggttgtgatatgctgattgtgcaaaaagaatctaagtatttatattattca-------actctg-gtgaactgaaataaagtcactctttgt 890  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||       |||||  |||| ||||||||||||| ||||||||    
T  36772223 atatgattggttgtgatatggtgattgtgcaaaatgaatctaagtaattatattattcataggatcactctttgtgatctgaaataaagtcgctctttgt 36772124  T
Q  891 acttcaaacttataaagttattcaacaagaacaatttgttattcccttgatttaaagacgtataaggactttatccttctgctaccaaagttattgcatc 990  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| || ||||||||| ||||||||||||||     
T  36772123 acttcaaacttataaagttattcaacaagaacaatttattatt-ccttgatttgaagacgtataaggacttcat-cttctgcta-caaagttattgcat- 36772028  T
Q  991 ctgttctcgttagcaatatgatcaca 1016  Q
    ||| ||||||||||||||||||||||    
T  36772027 ctg-tctcgttagcaatatgatcaca 36772003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 22119911 - 22120090
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  22119911 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 22120010  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  22120011 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 22120090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 40543088 - 40542909
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  40543088 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 40542989  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  40542988 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40542909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 512 - 678
Target Start/End: Original strand, 7275300 - 7275478
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  7275300 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 7275399  T
Q  601 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||| ||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  7275400 tttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 2751294 - 2751473
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  2751294 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 2751393  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  | |||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  2751394 tttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 21835174 - 21835353
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| |||  ||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  21835174 ttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 21835273  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||| | |||||||    
T  21835274 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 7176040 - 7175861
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  7176040 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 7175941  T
Q  601 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||| ||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||  |||||||    
T  7175940 tttaaacaggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttttc 7175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 11997872 - 11998051
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||||||| |||||||||| ||||||| || |||||||||||||| ||||||||||||||| |          ||    
T  11997872 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagcttgctctggc 11997971  T
Q  601 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||| ||| |||||  |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  11997972 tttaaactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 11998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 512 - 678
Target Start/End: Original strand, 18044130 - 18044308
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| ||| |||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  18044130 ttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagcttgctctggc 18044229  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||| ||||   |||||||| ||| |||||||| ||| |||||||||||| |||||||||||||| ||||||    
T  18044230 tttaaacggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 654863 - 654704
Alignment:
Q  531 tttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccggga 619  Q
    |||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||          |||||||| |||||  |    
T  654863 tttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccgcaa 654764  T
Q  620 gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||| | |||||||||||| ||||||||||||| || |||||||||||||| |||||||    
T  654763 gtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 22703509 - 22703688
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||| |||||||||||||||||||||||||| |          ||    
T  22703509 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctggc 22703608  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  22703609 tttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagttttc 22703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 27312175 - 27312354
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 600  Q
    |||||||  |||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||| || || ||||||||||||||          |    
T  27312175 ttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctacctctgac 27312274  T
Q  601 tttaaacgg-ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||| | |||||  |||||| | |||||||||||| ||| |||||||||||| |||||||||||||| |||||||    
T  27312275 tttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 27312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 23012686 - 23012595
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||| ||| ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23012686 ttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagctt 23012595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 28089839 - 28090021
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga------------ 598  Q
    |||||||  |||||||||||||||||||| |||||||||||||| ||| ||| || ||| |||||||||||||||||||||||||| |                
T  28089839 ttggcttgagatcttggagtttgctcctccagatgtctcaggttcgataccctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctc 28089938  T
Q  599 --gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
      |||||||| ||| |||||  |||||| |||| ||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  28089939 tggctttaaatgggcccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 28090021  T

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Target: chr7; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 521 - 678
Target Start/End: Complemental strand, 17197119 - 17196950
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| | | |||||| ||| ||||||| || ||||||||||||||| ||||||||||||||||          |||||||||||    
T  17197119 gatcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgg 17197020  T
Q  610 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    || |||||  |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  17197019 ggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

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Target: chr7; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 21218011 - 21217832
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| ||  |||||||||||||||||||||||||||||||          ||    
T  21218011 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagcttgctctagc 21217912  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||  ||||   |||||| | |||||||| ||| ||||||||||| |||| |||||||||||||| |||||||    
T  21217911 tttaaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagttttc 21217832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 2103078 - 2103169
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  2103078 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 2103169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 10091211 - 10091302
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  10091211 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 10091302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 512 - 672
Target Start/End: Original strand, 17212076 - 17212248
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||  |||| | || ||||||||||||||||||||||||||||||||          ||    
T  17212076 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaagtccatacagagattgctctggc 17212175  T
Q  601 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacca 672  Q
    || ||||||| |||| |  |||| ||| |||||||||||| |||||||||||||||| ||||||| |||||||    
T  17212176 ttaaaacgggacccctgcaagtgagtggtgggattggtcccctcggattagtcgattcttggatcagatacca 17212248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 27009382 - 27009473
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  ||||||||||||||||| || ||| |||||||||| ||| ||| || ||||||||||||||||||||||||||||||||||||    
T  27009382 ttggcttcggatcttggagtttgctcatccagaggtctcaggttcgatcccctctggtgccaatttcggtgggctaagtccatacagagctt 27009473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 529 - 679
Target Start/End: Original strand, 29861711 - 29861872
Alignment:
Q  529 agtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgggg-ccccg 616  Q
    |||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||||||||||||| |||||    
T  29861711 agtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacggggcccccg 29861809  T
Q  617 ggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
      |||||| | |||||||| ||| |||| ||||||||||| || ||||||||||| |||||||    
T  29861810 caagtgggcggtgggattgatcccctcgaattagtcgattcttagatcggataccgagttttc 29861872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 9683858 - 9683940
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||| |||||||||||||||||| ||||||||  | |||||| |||||||||||||||||||||||||||||||| ||||||    
T  9683858 gatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgggctaagtccataccgagctt 9683940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 42814896 - 42814978
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||||||||||| || |||||||||| ||||||| || ||| |||||||||||||||||||||||||| |||||    
T  42814896 gatcttggagtttgctcctcttgaagtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt 42814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 7800010 - 7799919
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||| ||||| |||||||||| |||||||    
T  7800010 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggttaagtccatagagagctt 7799919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 13332601 - 13332510
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  ||||||||||||||||||||  || |||||||||  ||||||| || | ||||||||||||||||||||||||||||||||||    
T  13332601 ttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctggagccaatttcggtgggctaagtccatacagagctt 13332510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 529 - 679
Target Start/End: Original strand, 16374034 - 16374196
Alignment:
Q  529 agtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacggggccccgg 617  Q
    |||||||||||| ||| ||||||| || ||||||| || ||||||||||||||||| ||||||||||||||          |||||||||||| |||| |    
T  16374034 agtttgctcctccagaggtctcagattcgattccctctggtgccaatttcggtgggttaagtccatacagaatttgctatggctttaaacgggacccccg 16374133  T
Q  618 gag-tgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
     |  |||  | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  16374134 caaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 19421254 - 19421345
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||||||| |||||||||| || |||  || ||| |||||||| |||||||||||||||||||||||    
T  19421254 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagctt 19421345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 31197614 - 31197792
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacaga----------gct 601  Q
    |||||||  ||||||||||||||||| || ||||||||||||||||||||     ||| ||||||||||||  ||||||||||||||          |||    
T  31197614 ttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattcattatgtgtcaatttcggtggattaagtccatacagatcttgctcttgct 31197713  T
Q  602 ttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||| |||||  |||||  | |||||||||||| ||| |||||||||||| |||||||||||| | |||||||    
T  31197714 ttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttttc 31197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 42913691 - 42913512
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||||||| |||||||||| |||| |   | |||||||||||| |||| ||||||||||| ||          ||    
T  42913691 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcatatggtgccaatttcgatgggataagtccatacggaacttgctctggc 42913592  T
Q  601 tttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||||||| | | ||||  | |||||||||||| ||||||||||| |||| || ||||||||||| |||||||    
T  42913591 tttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttttc 42913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 679
Target Start/End: Original strand, 31273946 - 31274115
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| |||  ||||| ||| ||||||| || | || |||||||| ||||||||||||||||||          |||||||||||    
T  31273946 gatcttggagtttgctcctccagagctctcaagttcgattccctctggagctaatttcggcgggctaagtccatacagagcttgctctggctttaaacgg 31274045  T
Q  610 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||| |||  ||||||   || ||||||||| |||| ||||||||||| ||||| |||||||| |||||||    
T  31274046 ggctccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttttc 31274115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 32849623 - 32849705
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| ||| ||||| |||||||||||| |||||  |||||| ||||||||||||||| || ||||||    
T  32849623 gatcttggagtttgctcctccagaggtctcgggtttgattccctctagtctcaattttggtgggctaagtccacactgagctt 32849705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 678
Target Start/End: Complemental strand, 39145821 - 39145652
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccat-acaga----------gctttaaacg 608  Q
    |||||||||||||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||| || |||||          ||||||||||    
T  39145821 gatcttggagtttgctcctccagatgtcttcggttcgattccctgtggtgccaatttcggtgggctaagtcaataacagagcttgctctggctttaaacg 39145722  T
Q  609 gggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    || ||| |  |||||  | |||||||||||| |||| ||||||||||| ||| ||| |||||||||||||    
T  39145721 ggcccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 522 - 602
Target Start/End: Complemental strand, 14199834 - 14199753
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||| |||||| ||| |||||||||| ||||||| ||| ||||||||| ||||||||||||| ||| |||||||    
T  14199834 atcttggagtttcctcctccagaggtctcaggttcgattccctctaatgccaattttggtgggctaagtctatatagagctt 14199753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 2344322 - 2344501
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt------- 603  Q
    |||||||  |||||||||||||||||||| | |  |||||| || ||||||  || |||||||||| ||||||||||||||||||||||||||           
T  2344322 ttggcttgggatcttggagtttgctcctccaaagctctcagattcgattccttctggtgccaattttggtgggctaagtccatacagagctttttttggc 2344421  T
Q  604 ---aaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
       ||||||| |||| | | ||| | | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  2344422 tttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 2344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 599 - 678
Target Start/End: Original strand, 3851878 - 3851958
Alignment:
Q  599 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||||||||| | | ||||| | |||||||| ||| |||||||||||||||| |||||||||||||| ||||||    
T  3851878 gctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 567 - 679
Target Start/End: Original strand, 23092175 - 23092298
Alignment:
Q  567 gtgccaatttcggtgggctaagtccatacaga----------gctttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgat 655  Q
    ||||||||||||||||||||||||||||||||          ||||||||||||| |||||  | |||  | |||||||||||| |||||||||||||||    
T  23092175 gtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagtcgat 23092274  T
Q  656 ttttggatcggataccaagttttc 679  Q
    |  ||||||||||||| |||||||    
T  23092275 tcatggatcggataccgagttttc 23092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 27704025 - 27704116
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  ||||||| |||||||||||  ||| |||||||||| |||| || | | ||||||||||||||||||||||||||| |||||||    
T  27704025 ttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatttcctttggtgccaatttcggtgggctaagtccatagagagctt 27704116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 619 - 678
Target Start/End: Complemental strand, 31712961 - 31712902
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  31712961 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

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Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 512 - 585
Target Start/End: Original strand, 22299872 - 22299946
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggct 585  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||| ||||||| || |||||||||||||||||||    
T  22299872 ttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggct 22299946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 546 - 678
Target Start/End: Complemental strand, 41907657 - 41907514
Alignment:
Q  546 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacggggccccggga-gtgggtgatgggat 633  Q
    |||||||||| ||||| | || ||||||||||| |||||||||||||||||||||          ||||||||| |||||| | | ||||||| ||||||    
T  41907657 gtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagaggttgctctggctttaaacgtggcccccgcaagtgggtggtgggat 41907558  T
Q  634 tggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | | |||||||||||| |||||||||||||| ||||||    
T  41907557 tggtcccc-cagattagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 603
Target Start/End: Original strand, 22696352 - 22696433
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    ||||||||||| |||||||||  | |||||||||||||||||| || |||||||||||||||||   | |||||||||||||||    
T  22696352 gatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg--gactccatacagagcttt 22696433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 671
Target Start/End: Complemental strand, 43785477 - 43785306
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 602  Q
    |||||||  |||||| ||| ||||||||| | | |||||| ||| ||||||| || |||| |||||| |||| |||||||||||||||||||            
T  43785477 ttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattcccacttgtgctaatttcagtggactaagtccatacagagcttactctggt 43785378  T
Q  603 --taaacggggcc-ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
      ||||||||||| |||  |||||  | || ||||||||| || ||||||||||||||||||||||||||||    
T  43785377 tttaaacggggcctccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcggatacc 43785306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 9718152 - 9718074
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||| | | |||||| ||| ||||||| || ||| |||||||| ||||||||||||||| |||||||    
T  9718152 ttggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagctt 9718074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 633 - 679
Target Start/End: Original strand, 22299958 - 22300004
Alignment:
Q  633 ttggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||    
T  22299958 ttggtcctctcggattagtcgattcttgaatcggataccgagttttc 22300004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 529 - 602
Target Start/End: Original strand, 28950911 - 28950985
Alignment:
Q  529 agtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||  ||| |||||||||| || |||| || ||||||||||||||||||||||| |||| |||||||    
T  28950911 agtttgctccttcagaggtctcaggttcgactccctctggtgccaatttcggtgggctaagttcatatagagctt 28950985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 629 - 678
Target Start/End: Original strand, 22696473 - 22696522
Alignment:
Q  629 gggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||||||||||||||||| |  |||||||||||||| ||||||    
T  22696473 gggattggtcctctcggattagtcggtccttggatcggataccgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 628 - 677
Target Start/End: Original strand, 32849742 - 32849791
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    |||||||||||| ||| |||||||||||| |||||||||||||| |||||    
T  32849742 tgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 566 - 602
Target Start/End: Original strand, 21373788 - 21373824
Alignment:
Q  566 agtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||||||||||||||| |||||||||||    
T  21373788 agtgccaatttcggtgggctaagtctatacagagctt 21373824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 599 - 677
Target Start/End: Original strand, 22638409 - 22638488
Alignment:
Q  599 gctttaaacggggcc-ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    ||||||||||||||| |||  |||||| | |||||||| ||  |||| ||||||||||| |||||||||||||| |||||    
T  22638409 gctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 667
Target Start/End: Original strand, 25333554 - 25333593
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcgga 667  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  25333554 tgggattggtcccctcggattagtcgattcttggatcgga 25333593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 599
Target Start/End: Original strand, 28647001 - 28647079
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    ||||||||||| |||| ||||  | |||||||||| ||||||| || |||||||||||||||||| ||||| ||||||||    
T  28647001 gatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggc-aagtcaatacagag 28647079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 671
Target Start/End: Original strand, 36395501 - 36395540
Alignment:
Q  632 attggtcctctcggattagtcgatttttggatcggatacc 671  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  36395501 attggtcctctcggattagtcgattcttggattggatacc 36395540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 600
Target Start/End: Complemental strand, 12211713 - 12211625
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagc 600  Q
    |||||||  ||||||||||| |||||||||  |  |||||||||||| |||| || |||||||||||| ||| | |||||||||||||||    
T  12211713 ttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaatttcgatggac-aagtccatacagagc 12211625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 525 - 603
Target Start/End: Complemental strand, 21574268 - 21574189
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattccccta--gtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    ||||||| |||||||||  | ||| |||||| |||||||||   ||||||| |||||||||| ||||||||||||||||||    
T  21574268 ttggagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggc-aagtccatacagagcttt 21574189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 561
Target Start/End: Original strand, 23854419 - 23854468
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattc 561  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||||    
T  23854419 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 23854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 702 - 731
Target Start/End: Original strand, 36772254 - 36772283
Alignment:
Q  702 ccgacaatgtaaaatattttacattgtcgg 731  Q
    ||||||||||||||||||||||||||||||    
T  36772254 ccgacaatgtaaaatattttacattgtcgg 36772283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 9e-45; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 521 - 679
Target Start/End: Original strand, 14212920 - 14213080
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacgggg-ccccggg 618  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| | ||||||||||||||| |||||||||||||||| |||||      
T  14212920 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagtccatatagagctttaaacgggggccccgca 14213019  T
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  14213020 agtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttc 14213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 3222812 - 3222635
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 602  Q
    |||||||  ||||||| |||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||            
T  3222812 ttggcttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgtc 3222714  T
Q  603 --taaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
      ||||||||||||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  3222713 tttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 521 - 678
Target Start/End: Complemental strand, 654315 - 654146
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          |||||||||||    
T  654315 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 654216  T
Q  610 ggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||| ||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  654215 ggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 15360276 - 15360097
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  15360276 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 15360177  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  | |||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  15360176 tttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 15360097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 34147365 - 34147544
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  ||||||||||||||||| || ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  34147365 ttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 34147464  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  34147465 tttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 34159981 - 34160160
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  ||||||||||||||||| || ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  34159981 ttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 34160080  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  34160081 tttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34160160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 512 - 678
Target Start/End: Original strand, 11448890 - 11449068
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          ||    
T  11448890 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 11448989  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||| | ||||||    
T  11448990 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 21148688 - 21148510
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 602  Q
    |||||||  ||||||||||||||||  |  ||| |||||| ||| ||||||| ||||||||||||||| |||||||||||||||||||||||            
T  21148688 ttggcttgggatcttggagtttgctttttcagaggtctcaagttcgattccctctagtgccaatttcgatgggctaagtccatacagagcttgctctgac 21148589  T
Q  603 --taaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
      ||||||||||||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  21148588 tttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 21148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 512 - 677
Target Start/End: Original strand, 9238994 - 9239171
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||| |||||||||| |||          ||    
T  9238994 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatatagagcttgctttggc 9239093  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    |||||| |||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  9239094 tttaaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 17081232 - 17081141
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| |||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  17081232 ttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccctctggtgtcaatttcggtgggctaagtccatacagagctt 17081141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 521 - 678
Target Start/End: Original strand, 28672095 - 28672264
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||||||| |||| ||||| ||||||| || ||| |||||| |||||||||||||||||||||          |||||||||||    
T  28672095 gatcttggagtttgctcctctagaggtcttaggttcgattccctctggtgtcaattttggtgggctaagtccatacagagcttgttttggctttaaacgg 28672194  T
Q  610 ggccc-cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    | ||| ||  |||||| | |||||||||||| |||||||||||||||| ||||||| |||||| ||||||    
T  28672195 gcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 21982498 - 21982320
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  ||||||| |||||||||||| ||| |||| ||||| |||||||  | ||||||||||| ||||||||||||||||||||          ||    
T  21982498 ttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagcttgctctggc 21982399  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  21982398 tttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagttttc 21982320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 5360249 - 5360158
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||| ||| ||| |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  5360249 ttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcggtgggctaagtccatacagagctt 5360158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 521 - 679
Target Start/End: Original strand, 1344963 - 1345133
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||| ||||| ||| |||||||||| ||||||| || ||||||||||| |||||||||||||||||| |          |||||||||||    
T  1344963 gatcttggagtttgttcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggctttaaacgg 1345062  T
Q  610 g-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |  |||||  |||||  | |||||||||||| || ||||||||||||| |||||||||||||| |||||||    
T  1345063 gccccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 1345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 12591656 - 12591747
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||    
T  12591656 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggctaagtccatacagagctt 12591747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 525 - 678
Target Start/End: Complemental strand, 9690803 - 9690638
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggcc 613  Q
    ||||||||||||| || ||| |||| ||||| |||| |  |||||| ||||||||||||||||||||||||||||||||          |||||||||||    
T  9690803 ttggagtttgctcttccagaggtcttaggttcgatttcttctagtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcc 9690704  T
Q  614 c-cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    | |   |||||  | ||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9690703 ctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 9843957 - 9844136
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||||||| |||||||||| || |||| || ||| |||||| |||||| ||||||||||||||          ||    
T  9843957 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgacttcctctggtgtcaattttggtgggttaagtccatacagagcttgttctggc 9844056  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| ||||   |||||| | || |||||||||  ||||||||||||||| |||||||||||| | |||||||    
T  9844057 tttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttttc 9844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 598
Target Start/End: Original strand, 13753259 - 13753346
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattc-ccctagtgccaatttcggtgggctaagtccatacaga 598  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||  |||| | || ||||||||||||||||||||| ||||||||||    
T  13753259 ttggctttggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaaatccatacaga 13753346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 533 - 602
Target Start/End: Original strand, 12390465 - 12390535
Alignment:
Q  533 tgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  12390465 tgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 12390535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 521 - 600
Target Start/End: Original strand, 9208280 - 9208359
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggctaagtccatacagagc 600  Q
    |||||||||||||||||||||  | |||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||    
T  9208280 gatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggc-aagtccatacagagc 9208359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 531 - 678
Target Start/End: Original strand, 11840939 - 11841097
Alignment:
Q  531 tttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc----------tttaaacggggccccggga 619  Q
    |||||||||| ||| |||||||| | ||||||| || ||||||||||||||||| |||||||||||| |||          |||||||||||||||   |    
T  11840939 tttgctcctccagaggtctcaggctcgattccctctggtgccaatttcggtgggttaagtccatacaaagcttgctttggttttaaacggggccccataa 11841038  T
Q  620 gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||  | ||||||| |||| |||| ||||||||||| |||||||||||||| ||||||    
T  11841039 gtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 512 - 598
Target Start/End: Complemental strand, 28968220 - 28968133
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattc-ccctagtgccaatttcggtgggctaagtccatacaga 598  Q
    |||||||  |||||||||||||||||||||||| ||||||| || ||||| | |||| | ||||||||||||| ||||||||||||||    
T  28968220 ttggcttgggatcttggagtttgctcctctagaggtctcagattcgattctctctagcgtcaatttcggtgggttaagtccatacaga 28968133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 11007184 - 11007363
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 602  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||| | ||  |  |||||||||||||||||||||||||| |||||            
T  11007184 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcactctgctctcaatttcggtgggctaagtccatacaaagcttgctctagc 11007283  T
Q  603 --taaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
      ||| ||||||||| | | ||||| | ||||||||| || |||||||||||||||| || ||||||||||| |||||||    
T  11007284 tttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagttttc 11007363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 521 - 678
Target Start/End: Complemental strand, 33718627 - 33718469
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacggggccccggga 619  Q
    ||||||||||||| || ||| |||  ||||||||| ||||| | || |||| ||||| ||||  |||||| ||||||||| ||||||||||||| | | |    
T  33718627 gatcttggagtttacttctccagagatctcaggttcgattctctctggtgcaaattttggtgaactaagtacatacagag-tttaaacggggcctctgca 33718529  T
Q  620 -gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
     ||||  | |||||||| ||| |||||||||||||||| |||||||||||| ||| ||||    
T  33718528 agtggacggtgggattgatcccctcggattagtcgattcttggatcggatatcaaatttt 33718469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 599
Target Start/End: Original strand, 31039039 - 31039127
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    ||||||||  ||||||||||||||||| | | |  ||||| ||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  31039039 ttggctttgaatcttggagtttgctccaccaaagatctcaagtttgattccctctagtatcaatttcgatgggctaagtccatacagag 31039127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 521 - 600
Target Start/End: Complemental strand, 17149625 - 17149546
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc 600  Q
    ||||||||||| |||||||||  | |||||||||| ||||||| || |||| ||||||||| ||| |||||||||||||||    
T  17149625 gatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttggc-aagtccatacagagc 17149546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 628 - 668
Target Start/End: Original strand, 20836970 - 20837010
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggat 668  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  20836970 tgggattggtcttctcagattagtcgatttttggatcggat 20837010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 628 - 678
Target Start/End: Complemental strand, 5360121 - 5360071
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| |||| ||||||||||| || ||||||||||| ||||||    
T  5360121 tgggattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 512 - 596
Target Start/End: Original strand, 33499493 - 33499578
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtt-tgattccc-ctagtgccaatttcggtgggctaagtccataca 596  Q
    |||||||  |||||||||||||||||||||  | ||||||||||  ||||||| || ||| ||||||||||||||| ||||||||||    
T  33499493 ttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctctggtgtcaatttcggtgggct-agtccataca 33499578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 9e-39; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 19456387 - 19456210
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacaga----------gct 601  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||| || || ||||||||||||||||||||||||||||||||          |||    
T  19456387 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggct 19456288  T
Q  602 ttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  19456287 ttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 19456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 8484839 - 8484660
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || ||||||||||||||||||||||| ||||||||          ||    
T  8484839 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctggc 8484740  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  8484739 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 521 - 678
Target Start/End: Complemental strand, 11926671 - 11926501
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          |||||||||||    
T  11926671 gatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 11926572  T
Q  610 gg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||  |||||  |||||||| |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  11926571 ggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 522 - 679
Target Start/End: Complemental strand, 27498899 - 27498730
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacggg 610  Q
    ||||||||||||||||||||||| |||||||||| ||||||| || |||||||||||||||||||||||||||||| |          ||||||||||||    
T  27498899 atcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggg 27498800  T
Q  611 g-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    | |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  27498799 gcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 27498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 521 - 671
Target Start/End: Original strand, 38684236 - 38684397
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          |||||||||||    
T  38684236 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 38684335  T
Q  610 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    | |||||  |||| | | |||||||||||| |||||||||||||||| ||||||||||||||    
T  38684336 gcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggatacc 38684397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 521 - 679
Target Start/End: Original strand, 18207235 - 18207405
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacg- 608  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| |  ||||||||||||||||||||||||||||||||          ||||||||||     
T  18207235 gatcttggagtttgctcctccagaggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttgttctggctttaaacga 18207334  T
Q  609 gggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    || |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  18207335 ggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 18207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 522 - 671
Target Start/End: Complemental strand, 11465075 - 11464915
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggg 610  Q
    ||||||||||||||||||| | |||||||||||| |||| || || |||||||||| |||||||||||| ||||||||||||          ||||||||    
T  11465075 atcttggagtttgctcctccaaatgtctcaggttcgatttcctctggtgccaattttggtgggctaagttcatacagagcttactctggctttaaacggg 11464976  T
Q  611 gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    ||||||  |||||||| |||||||||||| |||| ||||||||||| ||||||||||||||    
T  11464975 gccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggatacc 11464915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 7085804 - 7085625
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 600  Q
    |||||||  ||||||||||||| |||||| ||| ||||| |||| ||||||| |||||| |||||||||||||||||||||||||||||          |    
T  7085804 ttggcttgggatcttggagttttctcctccagaggtctccggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgctctgac 7085705  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  7085704 tttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 7085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 15641283 - 15641105
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||          ||    
T  15641283 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggc 15641184  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  15641183 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 15641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 671
Target Start/End: Complemental strand, 33709679 - 33709510
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga--------gctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||| ||||||| || ||||||||||||||||||||||||||||||||        ||||    
T  33709679 ttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtccatacagagagctctggctt 33709580  T
Q  603 taaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    ||||||||  ||||   |||||| | |||||||||||| |||||||||||||||| ||||||||||||||    
T  33709579 taaacgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 33709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 38631139 - 38630978
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacggg 610  Q
    |||||||  |||||||||||||||||||| ||| ||||||| || ||||||| || |||||||||||| ||||||||||||||||||||       | ||    
T  38631139 ttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcgatgggctaagtccatacagag-------cagg 38631047  T
Q  611 gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
     |||||  |||||| | |||||||||||| ||||||||| |||||| |||||||||||||| |||||||    
T  38631046 cccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttc 38630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 32059618 - 32059439
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||  || ||||||||||||||||||||||||||||||||          ||    
T  32059618 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 32059519  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  32059518 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 32059439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 22392720 - 22392886
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacagagctttaaacgggg 611  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||||||    |||||||||||||||||||||||        |||||||||||||    
T  22392720 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc--tgccaatttcggtgggctaagtcttgctctggctttaaacgggg 22392817  T
Q  612 ccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||| | | ||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| |||||||    
T  22392818 cccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttc 22392886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 25586951 - 25587042
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| || || ||||||||||||||||||||||||||||||||||||    
T  25586951 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggctaagtccatacagagctt 25587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 564 - 671
Target Start/End: Original strand, 35425085 - 35425203
Alignment:
Q  564 ctagtgccaatttcggtgggctaagtccatacagagct----------ttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtc 652  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||| | | ||||| | |||||||||||||||||||||||||    
T  35425085 ctagtgccaatttcggtgggctaagtccatacagagctcgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtc 35425184  T
Q  653 gatttttggatcggatacc 671  Q
    |||| ||||||||||||||    
T  35425185 gattcttggatcggatacc 35425203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 37495066 - 37495157
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||    
T  37495066 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagctt 37495157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 522 - 602
Target Start/End: Original strand, 34310171 - 34310252
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||    
T  34310171 atcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagctt 34310252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 521 - 670
Target Start/End: Complemental strand, 13038623 - 13038463
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga---------gctttaaacggg 610  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| | |||||||||| ||||||||         ||||||||||||    
T  13038623 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtatggctttaaacggg 13038524  T
Q  611 g-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    | |||||  |||||| | |||||||| ||| |||| ||||||||||| |||||||||||||    
T  13038523 gcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 30485847 - 30486026
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||| | || ||| ||||||||||||||||||||||||||||          ||    
T  30485847 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagcttgctctggc 30485946  T
Q  601 tttaaacg-gggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||  | |||||  |||||| | |||||||||||| |||||||||||| ||| |||||||||||||| |||||||    
T  30485947 tttaaacgatgcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 521 - 679
Target Start/End: Complemental strand, 10869734 - 10869564
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacgg 609  Q
    |||||||||||||||||||| | | |||||||||| ||||||  || || ||||||||||||||||||||||| || ||||||          |||| ||    
T  10869734 gatcttggagtttgctcctccaaaggtctcaggttcgattccatctggttccaatttcggtgggctaagtccacactgagcttgctctggctttaaatgg 10869635  T
Q  610 ggcc-ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||| |||  |||||| | |||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  10869634 ggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagttttc 10869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 512 - 670
Target Start/End: Complemental strand, 13108627 - 13108458
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag---------ct 601  Q
    |||||||  |||||||||||||||||||| |||  ||||||||| ||||||| || |||||||||| | |||||||||| |||||||||         ||    
T  13108627 ttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtctgcct 13108528  T
Q  602 ttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    |||||||||| |||||  |||||| | |||||||| ||| |||| ||||||||||| |||||||||||||    
T  13108527 ttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 599 - 679
Target Start/End: Complemental strand, 41351183 - 41351103
Alignment:
Q  599 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||||| |||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  41351183 gctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 41351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 1827708 - 1827617
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| ||  | |||||||||||||| ||||||||||||||||||    
T  1827708 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctgataccaatttcggtgggttaagtccatacagagctt 1827617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 4603796 - 4603975
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| | |  ||||| ||| ||||||  || |||||||||||| |||||||||||||||||||          ||    
T  4603796 ttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcgatgggctaagtccatacagagctcgctctggc 4603895  T
Q  601 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||||||| |  |||||  | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  4603896 tttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 4603975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 525 - 670
Target Start/End: Complemental strand, 27487720 - 27487562
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacag----------agctttaaacggggcc 613  Q
    ||||||||||||| || ||| |||||||||||||| ||   | |||||||||||||||| ||||||||||||||          |||||||||||||| |    
T  27487720 ttggagtttgctcttccagaggtctcaggtttgatcccatttggtgccaatttcggtggactaagtccatacagagcttgctctagctttaaacgggggc 27487621  T
Q  614 cc--gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    ||  |  |||||| | |||||||||||| |||||||||||||||| |||||||||||||    
T  27487620 ccttgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatac 27487562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 15971300 - 15971209
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| || |||| ||  || |||||||||||||||||||||||||| |||||    
T  15971300 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctgatgtcaatttcggtgggctaagtccatacatagctt 15971209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 521 - 599
Target Start/End: Original strand, 36954846 - 36954925
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||||||||||||||||||| |||||||||| ||||||| || || | |||||||| | |||||||||||||||||    
T  36954846 gatcttggagtttgctcctctagaggtctcaggttcgattccctctggttctaatttcggcgtgctaagtccatacagag 36954925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 601 - 678
Target Start/End: Original strand, 22693054 - 22693132
Alignment:
Q  601 tttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||||||| | | ||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 512 - 600
Target Start/End: Original strand, 7151348 - 7151437
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc 600  Q
    |||||||  |||||||||||||||||||| ||| |||| ||||| || |||| || | | ||||||||||||||||||||||||||||||    
T  7151348 ttggcttgggatcttggagtttgctcctcaagaggtcttaggttcgactccctctggcgtcaatttcggtgggctaagtccatacagagc 7151437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 511 - 602
Target Start/End: Complemental strand, 6014459 - 6014367
Alignment:
Q  511 attggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||  |||||||||||||||| ||| |||  ||||||||| |||| |  || ||||||||||||||||| ||||||||||||||||||    
T  6014459 attggcttgggatcttggagtttgcttctccagagatctcaggttcgattacttctggtgccaatttcggtgggttaagtccatacagagctt 6014367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 31288124 - 31287945
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagag----------c 600  Q
    |||||||  |||||||||||||||||||| | | |||||| ||| ||||||| | | |||||||||||||||| |||||||||||| ||          |    
T  31288124 ttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgggttaagtccatacaaagcttgctttgac 31288025  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||  |||| |||||||| || ||||| |||||||| |||||||    
T  31288024 tttaaacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagttttc 31287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 619 - 679
Target Start/End: Original strand, 37495192 - 37495252
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  37495192 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 37495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 628 - 679
Target Start/End: Complemental strand, 10631339 - 10631288
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  10631339 tgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 12398626 - 12398535
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| | | |||||||||| |||||||  | ||| |||||||||||| |||||| ||||||||||||    
T  12398626 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagctt 12398535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 521 - 603
Target Start/End: Complemental strand, 19145580 - 19145498
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    ||||||||||| |||||||||  | ||||| |||| ||||||| || |||||||||||||||||| ||||||||||||||||||    
T  19145580 gatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggc-aagtccatacagagcttt 19145498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 521 - 678
Target Start/End: Original strand, 42193513 - 42193680
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||| | | ||| |||||||||| |||| || ||  ||||||||||||||||||||||| |||||||          ||||||||  |    
T  42193513 gatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacagagtttgctttggctttaaa-tg 42193611  T
Q  610 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    | |||||  |||||| | |||| |||||||||||||||||||||||| ||||||| |||| ||| ||||    
T  42193612 gaccccgcaagtgggcggtggggttggtcctctcggattagtcgattcttggatcagatatcaattttt 42193680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 600
Target Start/End: Original strand, 15931087 - 15931166
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc 600  Q
    |||||||||||||||| ||  | | |||||||||| ||||||| || |||||||||||||| |||||||||||||||||||    
T  15931087 gatcttggagtttgcttcttcacaagtctcaggttcgattccctctggtgccaatttcggt-ggctaagtccatacagagc 15931166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 521 - 679
Target Start/End: Complemental strand, 21236531 - 21236361
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 609  Q
    ||||||||||||| |||||  ||| ||||  |||| ||||| | |||||| |||||||  ||||||||||||||||||||          ||||||||||    
T  21236531 gatcttggagttttctccttcagaggtcttcggttcgattctctctagtgtcaatttcaatgggctaagtccatacagagttttctctgactttaaacgg 21236432  T
Q  610 ggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| | | ||||| | ||||||| |||| ||| |||||||||||| ||| |||||||||| |||||||    
T  21236431 ggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagttttc 21236361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 512 - 678
Target Start/End: Complemental strand, 23270700 - 23270522
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt-------- 602  Q
    |||||||  ||||||||||||||||| || | | |||||| ||| |||| ||   | |||||||||||||||||||||||||||||||||||            
T  23270700 ttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcggtgggctaagtccatacagagcttgctttggc 23270601  T
Q  603 --taaacggggccccgggag-tgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
      ||||||| ||||| | |  |||  | |||||||||||| ||||||||||| |||| |||||| ||||||||||||||    
T  23270600 tttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgattcttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 628 - 678
Target Start/End: Complemental strand, 28614536 - 28614486
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||| ||| |||| |||||||||||||||||||||||||| ||||||    
T  28614536 tgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 524 - 596
Target Start/End: Complemental strand, 15485457 - 15485385
Alignment:
Q  524 cttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccataca 596  Q
    |||||||| |||||||||  | |||||||||| |||||||||    |||||||||||||| ||||||||||||    
T  15485457 cttggagtgtgctcctctcaaggtctcaggttcgattcccctgacaccaatttcggtgggttaagtccataca 15485385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 512 - 564
Target Start/End: Original strand, 37397732 - 37397784
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc 564  Q
    ||||||| ||||||||||||||||||||| | | |||| ||||||||||||||    
T  37397732 ttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattcccc 37397784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 599 - 678
Target Start/End: Original strand, 5049254 - 5049333
Alignment:
Q  599 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| |||||  | |||  | ||||||||||||  ||| ||||||||||| |||||||| ||||||||||||    
T  5049254 gctttaaacgggcccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 592
Target Start/End: Complemental strand, 12317318 - 12317247
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtcca 592  Q
    |||||||||||||||||||| || ||||| ||||||| |||  || ||| ||||||||||||| ||||||||    
T  12317318 atcttggagtttgctcctcttgaggtctcgggtttgatttcatctggtgtcaatttcggtgggttaagtcca 12317247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 678
Target Start/End: Complemental strand, 19145471 - 19145412
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | |||||||||||| ||||||||||| | || |||||||||||||| ||||||    
T  19145471 agtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 679
Target Start/End: Complemental strand, 25548584 - 25548533
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||    
T  25548584 tgggattggtcatctcgaattagtcgattcttggatcgaataccgagttttc 25548533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 512 - 601
Target Start/End: Complemental strand, 22253323 - 22253233
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagct 601  Q
    |||||||  |||||| || |||||||||||  |  ||||||||| || || | ||||||||||||||| ||||||||||||||||| ||||    
T  22253323 ttggcttgggatctttgactttgctcctctctagatctcaggttcgactttctctagtgccaatttcgatgggctaagtccatacaaagct 22253233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 512 - 562
Target Start/End: Original strand, 34049841 - 34049891
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcc 562  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||    
T  34049841 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 34049891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 628 - 678
Target Start/End: Original strand, 34310289 - 34310339
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| |||| |||| |||||| |||||||||||||| ||||||    
T  34310289 tgggattggtcccctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 610 - 667
Target Start/End: Original strand, 5067390 - 5067447
Alignment:
Q  610 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcgga 667  Q
    |||||||  |||||| | |||||||||||| ||| |||||||||||| ||||||||||    
T  5067390 ggccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 5e-37; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 15566677 - 15566499
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||          ||    
T  15566677 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 15566578  T
Q  601 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||| |||||  |||||| | |||||||||||| ||| |||||||||||| |||||||||||||| |||||||    
T  15566577 tttaaacgggcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 521 - 678
Target Start/End: Complemental strand, 52821804 - 52821636
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||| ||||||||||||||||          |||||||||||    
T  52821804 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgg 52821705  T
Q  610 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  52821704 ggccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 10190920 - 10190741
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||          ||    
T  10190920 ttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 10190821  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||  | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  10190820 tttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 10083997 - 10083818
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||          ||    
T  10083997 ttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 10083898  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| ||||   |||||  | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  10083897 tttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 25289892 - 25289714
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||          ||    
T  25289892 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 25289793  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  25289792 tttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcgaattagtcgattcttggatcggataccgagttttc 25289714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 512 - 678
Target Start/End: Complemental strand, 49258440 - 49258262
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  ||||||| |||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||          ||    
T  49258440 ttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 49258341  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||| ||||   |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  49258340 tttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 53424354 - 53424176
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| | | |||||||||||||||||||||||||||||||          ||    
T  53424354 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagtttgctatggc 53424255  T
Q  601 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||| |||||  |||| | | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  53424254 tttaaacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 512 - 678
Target Start/End: Original strand, 35492930 - 35493108
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  35492930 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 35493029  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||| | ||||| ||||||    
T  35493030 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 30807331 - 30807152
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  30807331 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 30807232  T
Q  601 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||  |||||  |||||| | | |||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  30807231 tttaaacggggccccccgcaagtgggcggtaggattggtcc-ctcggattagtcgattcttggatcggataccgagttttc 30807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 521 - 678
Target Start/End: Complemental strand, 39042021 - 39041852
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacgg 609  Q
    |||||||||||||||||||| ||| |||||| ||| ||||| | || ||||||||||||||||||||||||||| ||||||||          |||||||    
T  39042021 gatcttggagtttgctcctccagaggtctcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggctttaaacgg 39041922  T
Q  610 ggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | | ||||||| |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  39041921 ggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 8456328 - 8456149
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||| ||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  8456328 ttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 8456229  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  ||||||   |||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  8456228 tttaaacggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 45272594 - 45272415
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||||||||||| || ||||||| || ||||||||||||||||||||||||||||| ||          ||    
T  45272594 ttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctggtgccaatttcggtgggctaagtccatacggagcttgctctggc 45272495  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| ||||||||||| || | |||||||||||||| |||||||    
T  45272494 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagttttc 45272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 46576367 - 46576546
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||| ||||||||||||||||||||          ||    
T  46576367 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggc 46576466  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | | |||||||||| || ||||||||||||| |||||||||||||| |||||||    
T  46576467 tttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagttttc 46576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 53234088 - 53233910
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||            
T  53234088 ttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 53233989  T
Q  603 --taaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
      ||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  53233988 tctaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 53233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 512 - 670
Target Start/End: Original strand, 25379780 - 25379950
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||  |||||||||||||||| ||||||||||||||||||          ||    
T  25379780 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggagggctaagtccatacagagcttgctctggc 25379879  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    ||||||||||| |||||  || ||| | |||||||||||| |||||||||||||||| |||||||||||||    
T  25379880 tttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatac 25379950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 26174132 - 26174311
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| || || ||||||||||||||||| ||||||||||||||          ||    
T  26174132 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagcttgctctggc 26174231  T
Q  601 tttaaa-cggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||  ||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  26174232 tttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 40133627 - 40133448
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  ||| |||||||||||||||| | | |||||||||| ||||||| || ||| ||||||||||||||||||||||||||||          ||    
T  40133627 ttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctggc 40133528  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  40133527 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 40133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 26108311 - 26108402
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  26108311 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 26108402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 45529932 - 45529754
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | |||||||||| |||||||||||||||||||          ||    
T  45529932 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgatgggctaagtccatacagagcttgctctggc 45529833  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  45529832 tttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 45529754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 40940844 - 40940935
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||||||||| |||||||||||||||||||    
T  40940844 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagctt 40940935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 521 - 679
Target Start/End: Original strand, 48977416 - 48977586
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| | | |||||||||| ||||||  || ||||||||||||||||| ||||||||||||||          |||||||||||    
T  48977416 gatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacgg 48977515  T
Q  610 ggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |  |||||| | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  48977516 ggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 48977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 521 - 670
Target Start/End: Complemental strand, 18177056 - 18176895
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    ||||||||||||||||| || ||| || ||||||| ||||||| || |||||||||||||||| |||||||||||||||          |||||||||||    
T  18177056 gatcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctggctttaaacgg 18176957  T
Q  610 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    || |||||  |||||| | ||||||||||||  ||||||||||||||| |||||||||||||    
T  18176956 ggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatac 18176895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 521 - 678
Target Start/End: Original strand, 21362971 - 21363140
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||| |||||||||| |||||||||||||||||          |||||||||||    
T  21362971 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagcttgctctggctttaaacgg 21363070  T
Q  610 -ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
     | |||||  |||||| | |||||||||| | ||||||||| |||||| |||||||||||||| ||||||    
T  21363071 agcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 533 - 679
Target Start/End: Complemental strand, 8097436 - 8097278
Alignment:
Q  533 tgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc----------tttaaacggggccccggga-g 620  Q
    |||||||| ||| | |||||||| ||||||| || |||| ||||||| |||||||||||||||||||||          ||||||||||||||| | | |    
T  8097436 tgctcctccagaggcctcaggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcatgctctggctttaaacggggcccccgcaag 8097337  T
Q  621 tgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  8097336 tgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 31538016 - 31537925
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||||||||||| || |||||||||| ||||||||||||| |||||||||||    
T  31538016 ttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccctctggtgccaattttggtgggctaagtctatacagagctt 31537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 521 - 679
Target Start/End: Complemental strand, 52455818 - 52455648
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| | ||||||||||| | ||||||          ||||||||||    
T  52455818 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagtctacacagagcttgctctgactttaaacgg 52455719  T
Q  610 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    || |||||  ||||  || |||||||||||| |||||||||||||||| |||||| ||||||| |||||||    
T  52455718 ggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 52455648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 7470384 - 7470302
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| | | |||||||||| ||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  7470384 gatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtgggctaagttcatacagagctt 7470302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 599 - 679
Target Start/End: Complemental strand, 24165794 - 24165714
Alignment:
Q  599 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||||||||||  |||||| | |||||||| ||| |||||||||||||||| |||||||||||||| |||||||    
T  24165794 gctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttttc 24165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 512 - 671
Target Start/End: Original strand, 30257643 - 30257814
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| | | |||||||||| |||||||  | |||||||||||| ||| |||||||||||||||          ||    
T  30257643 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggactaagtccatacagagcttgctctggc 30257742  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    |||||| |||| |||||  |||||| | ||| |||||||| |||||||||||||||| ||||||||||||||    
T  30257743 tttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggatacc 30257814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 34492753 - 34492662
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||| ||||||| ||  ||||||||||| |||||||||||||||||||||||    
T  34492753 ttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttcgttgggctaagtccatacagagctt 34492662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 521 - 678
Target Start/End: Complemental strand, 7485694 - 7485531
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccata--caga----gctttaaacggggcc 613  Q
    |||||||||||||||||||| | | |||||||||| ||||||| ||  |||||||||||||||||||||| ||||    ||    ||||||||| || ||    
T  7485694 gatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgggctaagttcatagcttgatctggctttaaacaggccc 7485595  T
Q  614 ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    | |  |||||  | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  7485594 ctgcaagtggccggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 29915438 - 29915356
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| ||| |||||||||| |||| |  || |||||| |||||||||||||||| ||||||||||||    
T  29915438 gatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggctaagtacatacagagctt 29915356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 29964591 - 29964509
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| ||| |||||||||| |||| |  || |||||| |||||||||||||||| ||||||||||||    
T  29964591 gatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggctaagtacatacagagctt 29964509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 678
Target Start/End: Original strand, 32151452 - 32151621
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacgg 609  Q
    |||||||||||||||||||| | | || |||  || ||||| | |||||||||||||||||||||||||  ||||||||||||          |||||||    
T  32151452 gatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgggctaagctcatacagagcttgctctggctttaaacgg 32151551  T
Q  610 ggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | | ||||| | || ||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  32151552 ggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 521 - 589
Target Start/End: Original strand, 19857079 - 19857148
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagt 589  Q
    |||||||||||||||||||| |||||||||||||| |||||||  | ||| |||||||||||||||||||    
T  19857079 gatcttggagtttgctcctccagatgtctcaggttcgattccctttggtgtcaatttcggtgggctaagt 19857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 619 - 679
Target Start/End: Complemental strand, 53848493 - 53848433
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  53848493 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53848433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 619 - 678
Target Start/End: Original strand, 24407399 - 24407458
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  24407399 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 521 - 679
Target Start/End: Complemental strand, 25344226 - 25344057
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 609  Q
    |||||| ||||||||||||| |||  ||||||||||||||||| | | || ||||||  |||| ||||||||||||||||          ||||||||||    
T  25344226 gatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaatttttgtggtctaagtccatacagagtttgctctggctttaaacgg 25344127  T
Q  610 ggccccggg-agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |  |||||| |||||||||||| | |||||||||||||||| || ||||| ||||| |||||||    
T  25344126 ggcccccgctagtgggcgatgggattggttc-ctcggattagtcgattcttagatcgaataccgagttttc 25344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 521 - 671
Target Start/End: Complemental strand, 33398637 - 33398475
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacgg 609  Q
    ||||||| ||||||||| |||| |  ||||| ||| ||||||| ||||||||||||| |||||| || |||||||||||||||          |||||||    
T  33398637 gatcttgtagtttgctcttctaaagatctcaagttcgattccctctagtgccaattttggtgggttatgtccatacagagcttgctctagctttaaacgg 33398538  T
Q  610 ggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    |||||| | | ||||| | |||||||||| | |||| ||||||||||| ||||||||||||||    
T  33398537 ggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggatacc 33398475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 546 - 679
Target Start/End: Complemental strand, 2511441 - 2511296
Alignment:
Q  546 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacggggcc-ccgggagtgggtgatgggat 633  Q
    |||||||||| ||||||| || ||||||||||||||||||||||| |||||||||          ||||||||||| || |||  |||||| | ||||||    
T  2511441 gtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagctcgctctgactttaaacgggacctccgcaagtgggcggtgggat 2511342  T
Q  634 tggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||  |||| |||||| |||| ||| ||||||||||||||||||    
T  2511341 tggtctcctcgaattagtagattcttgaatcggataccaagttttc 2511296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 51532821 - 51532899
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||| ||| | | |||||| ||| ||||| | ||| |||||||||||||||||||||||||||||||||||    
T  51532821 ttggagtttgcttctccaaaggtctcatgttcgattctctctaatgccaatttcggtgggctaagtccatacagagctt 51532899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 522 - 598
Target Start/End: Original strand, 1692863 - 1692940
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacaga 598  Q
    ||||||||||||||||||| ||| |||||||||| ||||||   ||||| |||||||||||| ||||||| |||||||    
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgattccatttagtgtcaatttcggtggactaagtctatacaga 1692940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 630 - 679
Target Start/End: Original strand, 3747730 - 3747779
Alignment:
Q  630 ggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 671
Target Start/End: Original strand, 26158837 - 26159001
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacag----agctttaaa 606  Q
    |||||||  ||||||||||| |||||||||  | ||||||||||| ||||||  | ||||||||||||||||| |||||||||||||     ||||  ||    
T  26158837 ttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcggtggg-taagtccatacagctctggcttagaa 26158935  T
Q  607 cgg-ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    ||| | |||||  |||||| | |||||||| ||| ||||||||||||| |  ||||||||||||||    
T  26158936 cggagcccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatacc 26159001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 678
Target Start/End: Original strand, 54475798 - 54475878
Alignment:
Q  599 gctttaaacggggcc-ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||||||| |||  |||||| | |||||||||||| || ||||||||||||| ||||||| |||||| ||||||    
T  54475798 gctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagtttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 528 - 602
Target Start/End: Complemental strand, 53288874 - 53288799
Alignment:
Q  528 gagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||| | | |||||||| | ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  53288874 gagtttgctcctccaaaggtctcaggctcgattccctctggtgccaatttcggtggactaagtccatacaaagctt 53288799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 628 - 678
Target Start/End: Original strand, 4048097 - 4048147
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| ||||||||||| |||| |||||||||||||| ||||||    
T  4048097 tgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 522 - 599
Target Start/End: Complemental strand, 6041840 - 6041762
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggctaagtccatacagag 599  Q
    ||||||||||||||||||||  | |  ||| ||| |||| ||||||||||||||||||||||  |||||||||||||||    
T  6041840 atcttggagtttgctcctctcaaggagtcatgttcgattgcccctagtgccaatttcggtggattaagtccatacagag 6041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 11390630 - 11390712
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||| |||||| | |  | |||||||||||| || || ||| |||||| |||||||||||||||||||||||||    
T  11390630 gatcttggagttttctcctccaaagatttcaggtttgatttcctctggtgtcaattttggtgggctaagtccatacagagctt 11390712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 521 - 594
Target Start/End: Original strand, 25017543 - 25017617
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccata 594  Q
    |||||||||||||||||||| | |  ||| ||||| ||||||  |||||| ||||||||||||||||||||||||    
T  25017543 gatcttggagtttgctcctccaaagatcttaggttcgattccatctagtgtcaatttcggtgggctaagtccata 25017617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 525 - 586
Target Start/End: Original strand, 40777052 - 40777114
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggcta 586  Q
    ||||||| |||||||||  | |||||||||||||||| | |||||||||||||||||||||||    
T  40777052 ttggagtgtgctcctctcaaggtctcaggtttgattctctctagtgccaatttcggtgggcta 40777114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 546 - 602
Target Start/End: Complemental strand, 17579280 - 17579223
Alignment:
Q  546 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||||| || ||||||  ||||| |||||||||||||||||||||||||    
T  17579280 gtctcaggtttgatttcctctagtgttaattttggtgggctaagtccatacagagctt 17579223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 622 - 679
Target Start/End: Complemental strand, 32094813 - 32094756
Alignment:
Q  622 gggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||| ||||||||||||||||  |||||||| || |||||||||||||| |||||||    
T  32094813 gggtggtgggattggtcctctcatattagtcggttcttggatcggataccgagttttc 32094756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 599 - 679
Target Start/End: Original strand, 1178289 - 1178368
Alignment:
Q  599 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||| ||||||||    ||||| | |||||||||||| |||||||||||||| | |||||||||||||| |||||||    
T  1178289 gctttaaatggggccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 1178368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 567 - 603
Target Start/End: Original strand, 1242048 - 1242084
Alignment:
Q  567 gtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1242048 gtgccaattttggtgggctaagtccatacagagcttt 1242084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 598 - 678
Target Start/End: Original strand, 4462749 - 4462829
Alignment:
Q  598 agctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||||||||||  |||||  | |||||||| ||| |||||||||||  ||| |||||| ||||||| ||||||    
T  4462749 agctttaaacggggccccgcaagtggacggtgggattgatccactcggattagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 599 - 670
Target Start/End: Complemental strand, 55371374 - 55371302
Alignment:
Q  599 gctttaaacggggccc-cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    |||| ||||||||||| ||  |||||| | |||||||||||| |||||||||||||||  |||||||||||||    
T  55371374 gcttaaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

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Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 678
Target Start/End: Complemental strand, 50731296 - 50731237
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | |||||||||||| ||| |||||||||||  |||||||||||||| ||||||    
T  50731296 agtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 678
Target Start/End: Original strand, 50781558 - 50781617
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | |||||||||||| ||| |||||||||||  |||||||||||||| ||||||    
T  50781558 agtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 628 - 670
Target Start/End: Complemental strand, 4252446 - 4252404
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    |||||||||||| |||||||||||||||  |||||||||||||    
T  4252446 tgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 631 - 677
Target Start/End: Original strand, 48105027 - 48105073
Alignment:
Q  631 gattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    |||||||||  ||||||||||||||| |||||||||||||| |||||    
T  48105027 gattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 604
Target Start/End: Complemental strand, 4252574 - 4252482
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttta 604  Q
    |||||||  ||||||||||| |||||||||  | |||||| ||||||||||| || ||||||||||| |||  | ||||||||||| |||||||    
T  4252574 ttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaatttcagtgatc-aagtccatacaaagcttta 4252482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 599 - 679
Target Start/End: Complemental strand, 33698786 - 33698705
Alignment:
Q  599 gctttaaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||||| ||||  | |||||| |||||||||||| |||  ||||||||||| | ||||||||| || |||||||    
T  33698786 gctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagttttc 33698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 596
Target Start/End: Original strand, 49167075 - 49167160
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca 596  Q
    |||||||  |||||||||||||||||||| | |  | ||||||| ||||| | || ||| |||||||||||| |||||||||||||    
T  49167075 ttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattctctctggtgtcaatttcggtggactaagtccataca 49167160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 522 - 602
Target Start/End: Original strand, 55287832 - 55287913
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||| ||||||||||||  ||| || ||||||| ||||||| || |||||||||| | ||||||| ||||||||| |||||    
T  55287832 atcttagagtttgctccttcagaggtttcaggttcgattccctctggtgccaattttgatgggctaggtccatacaaagctt 55287913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 8e-36; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 521 - 677
Target Start/End: Original strand, 17935797 - 17935965
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||||          |||||||||||    
T  17935797 gatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagagtttgctctggctttaaacgg 17935896  T
Q  610 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    || |||||  |||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  17935897 ggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 4621415 - 4621236
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  4621415 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 4621316  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  4621315 tttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4621236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 512 - 678
Target Start/End: Original strand, 24122042 - 24122220
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||| ||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  24122042 ttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 24122141  T
Q  601 tttaaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| ||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  24122142 tttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 671
Target Start/End: Original strand, 24674412 - 24674583
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  24674412 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 24674511  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||| ||||||||||| ||||||||||||||    
T  24674512 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggatacc 24674583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 7578428 - 7578607
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacagag----------c 600  Q
    |||||||  |||||||||||||| ||||| ||| |||||||||| |||||||  | |||||||||||||||||||||||||||||| ||          |    
T  7578428 ttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagcttgctctgac 7578527  T
Q  601 tttaaacggggccc-cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||||| ||  |||||||| |||||||||| | ||||||||||| ||||||||||||||||||| |||||||    
T  7578528 tttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagttttc 7578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 521 - 679
Target Start/End: Complemental strand, 7766896 - 7766726
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || |||| ||||||||||||||||||||||||||||          ||||||||||    
T  7766896 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagagcttgctctgactttaaacgg 7766797  T
Q  610 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    || |||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||| | |||||||    
T  7766796 ggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 522 - 679
Target Start/End: Complemental strand, 15059570 - 15059401
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacggg 610  Q
    ||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          ||||||||||||    
T  15059570 atcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggg 15059471  T
Q  611 g-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    | |||||  |||||| | || ||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  15059470 gtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagttttc 15059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 512 - 671
Target Start/End: Complemental strand, 45859221 - 45859050
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca----------gagc 600  Q
    |||||||  |||||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||            ||    
T  45859221 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatcgcttgctcttgc 45859122  T
Q  601 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    ||||||| ||| |||||  |||||||| | |||||||||| ||||||||||| |||| ||||||||||||||    
T  45859121 tttaaacagggcccccgcaagtgggtggtaggattggtcccctcggattagttgattattggatcggatacc 45859050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 8077666 - 8077757
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||    
T  8077666 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt 8077757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 30677204 - 30677286
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||| |||||||||||||| | | |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  30677204 gatctaggagtttgctcctccaaaggtctcaggtttgattccctctggtgccaatttcggtgggctaagtccatacagagctt 30677286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 46607838 - 46607920
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  46607838 gatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 46607920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 27455044 - 27454863
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||| | ||  |||||||||||||| ||||||||||||||||          ||    
T  27455044 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatgccaatttcggtgagctaagtccatacagagcttgctctggc 27454945  T
Q  601 tttaaacggg---gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||    |||||   ||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  27454944 tttaaacgggccccccccgcatgtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagttttc 27454863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 9500533 - 9500442
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||    
T  9500533 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt 9500442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 37351639 - 37351548
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| | |||||||||||| ||||||  ||  |||||||||||||||||||||||||||||||||||    
T  37351639 ttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattccttctgatgccaatttcggtgggctaagtccatacagagctt 37351548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 23734135 - 23734315
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 600  Q
    |||||||  |||||| || |||||||||| ||| |||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||          |    
T  23734135 ttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcc 23734234  T
Q  601 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||  |||||  |||||| | ||  |||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  23734235 tttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23734315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 23741327 - 23741507
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 600  Q
    |||||||  |||||| || |||||||||| ||| |||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||          |    
T  23741327 ttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcc 23741426  T
Q  601 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||  |||||  |||||| | ||  |||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  23741427 tttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23741507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 521 - 596
Target Start/End: Complemental strand, 46113571 - 46113495
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca 596  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || || |||||||||||||||||||||||||||    
T  46113571 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtaccaatttcggtgggctaagtccataca 46113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 678
Target Start/End: Complemental strand, 7197424 - 7197247
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| ||  |||||||||||||||| |||||| |||||||          ||    
T  7197424 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtggg-taagtcaatacagaccttgctctggc 7197326  T
Q  601 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||| |||||| |  |||||| | || ||||||||| ||||||||||||||||  ||||||||||||| ||||||    
T  7197325 tttaaacgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 7946863 - 7946954
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  ||||||| |||||||||||| ||| |||||| ||| ||||||| || |||||||||||||||||||||||| |||||||||||    
T  7946863 ttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagagctt 7946954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 36156057 - 36155975
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| ||| || ||||||| ||||||| || |||||||||||||||||| |||||||| ||||||||    
T  36156057 gatcttggagtttgctcctccagaggtgtcaggttcgattccctctggtgccaatttcggtgggccaagtccatgcagagctt 36155975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 599
Target Start/End: Complemental strand, 33905688 - 33905600
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||  ||||||||||||| |||||||||||||||    
T  33905688 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtatcaatttcggtgggttaagtccatacagag 33905600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 677
Target Start/End: Original strand, 34778361 - 34778535
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || || ||||||| |||||| |   ||||||||||          ||    
T  34778361 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtaccaattttggtgggtt---tccatacagagtttgctttggc 34778457  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    ||||||||||| |||||  |||||  | |||||||||||| || ||||||||||||| |||||||||||||| |||||    
T  34778458 tttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 521 - 599
Target Start/End: Complemental strand, 25237158 - 25237080
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||||||||||| ||||  | |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  25237158 gatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggc-aagtccatacagag 25237080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 671
Target Start/End: Original strand, 1378926 - 1379087
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| | | |||||| ||| |||| || || ||| ||||||||||||||||||||||||||||          |||||||||||    
T  1378926 gatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaatttcggtgggctaagtccatacagaacttgctctggctttaaacgg 1379025  T
Q  610 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    | |||||  |||||  | || ||||||||| ||| |||||||||||| || |||||||||||    
T  1379026 gcccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggatacc 1379087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 23232434 - 23232352
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||| ||||||||| || ||| || ||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  23232434 gatcttgaagtttgctcttccagaggtttcaggttcgattccctctggcgccaatttcggtgggctaagtccatacagagctt 23232352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 512 - 596
Target Start/End: Original strand, 18646872 - 18646957
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca 596  Q
    ||||||| ||||||| ||||||||| ||| ||| |||||||||| ||||| | || |||||||||||||||||||||||| |||||    
T  18646872 ttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtctataca 18646957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 521 - 596
Target Start/End: Original strand, 809250 - 809325
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggctaagtccataca 596  Q
    ||||||||||||| |||||||  | ||||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  809250 gatcttggagtttactcctcttaaggtctcaggtttgattacccctagtgtcaatttcggtgggc-aagtccataca 809325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 32729564 - 32729742
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||| ||||||||||||||  | |||||||||| |||||||  | |||||||||||||||||| |||||||||||||          ||    
T  32729564 ttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggc-aagtccatacagagcttgctctggc 32729662  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |||| |||||  |||||| | |||||||| ||| || |||||||||| | ||||||||||||||| |||||||    
T  32729663 tttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgagttttc 32729742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 168220 - 168311
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||| |||||||||| |  | | |||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||    
T  168220 ttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagctt 168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 8779905 - 8779823
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||| ||| ||| ||||||| || |||| |  |||||| |||||||||||||||||||||||||| |||||    
T  8779905 gatcttggagtttgcttctccagaggtctcagcttcgatttcttctagtgtcaatttcggtgggctaagtccatacacagctt 8779823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 18533893 - 18533811
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||| ||||||||||||| ||| || |||| |||||||| | ||||||||||||||| ||| ||||||||||| |||||||    
T  18533893 gatcttagagtttgctcctccagaggtatcagatttgattctctctagtgccaatttcgatggactaagtccatatagagctt 18533811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 524 - 601
Target Start/End: Original strand, 39964543 - 39964621
Alignment:
Q  524 cttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagct 601  Q
    |||||||| |||||||||  | |||||||||||||||||| || ||||||||||||||||||| ||| || ||||||||    
T  39964543 cttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtgggctgagttcacacagagct 39964621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 596
Target Start/End: Original strand, 2272372 - 2272448
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca 596  Q
    |||||| ||||||||||||  ||| |||||||||||||||||| ||  ||||||||||| |||||||||| ||||||    
T  2272372 gatcttagagtttgctcctacagaggtctcaggtttgattccctctgatgccaatttcgctgggctaagttcataca 2272448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 602
Target Start/End: Original strand, 21726759 - 21726839
Alignment:
Q  523 tcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||| |||||||||||| ||| |||||||||| |||||||  | |||||||||||| |||| |||||||||| |||||||    
T  21726759 tcttgaagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcgatgggttaagtccatatagagctt 21726839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 5315477 - 5315528
Alignment:
Q  627 atgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||| ||||||    
T  5315477 atgggattggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 632 - 679
Target Start/End: Original strand, 14603947 - 14603994
Alignment:
Q  632 attggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagttttc 14603994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 16749153 - 16749228
Alignment:
Q  60 aagggaatgttaattgggcaatagaatttgaaattagcatatagtttttcatgtggtgattttggttcatatgtgt 135  Q
    ||||||||| |||||||||||||  ||||||||| |||||| ||||||   | |||||||||||||||||| ||||    
T  16749153 aagggaatgataattgggcaatatcatttgaaatgagcatacagttttaattttggtgattttggttcatacgtgt 16749228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 546 - 603
Target Start/End: Original strand, 16539661 - 16539718
Alignment:
Q  546 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    |||||||||||||||||| || |||||||||| ||||||| ||||||||||||||||||    
T  16539661 gtctcaggtttgattccctctggtgccaattttggtgggc-aagtccatacagagcttt 16539718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 20487359 - 20487297
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgg 582  Q
    |||||||||||||||||||| ||| |||||| ||| ||||||| || ||||||||||||||||    
T  20487359 gatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 20487297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 628 - 678
Target Start/End: Original strand, 23041669 - 23041719
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  23041669 tgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 600 - 678
Target Start/End: Complemental strand, 26513226 - 26513148
Alignment:
Q  600 ctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||| ||||   |||||| | ||||| |||||| |||||||||||||||| |||||||| ||||| ||||||    
T  26513226 ctttaaacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 601 - 679
Target Start/End: Original strand, 27159205 - 27159283
Alignment:
Q  601 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||| |||||  |||||  | |||||||||||| ||| ||||||||||| ||||||||||||| | |||||||    
T  27159205 tttaaacgggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttttc 27159283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 600 - 678
Target Start/End: Complemental strand, 40802147 - 40802069
Alignment:
Q  600 ctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||| |||||  |||||||| || |||||||||||| | ||||||||||| ||| |||| ||||| ||||||    
T  40802147 ctttaaacgggtccccgcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaataccgagtttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 512 - 603
Target Start/End: Original strand, 1138598 - 1138689
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    |||||||  ||||||||||| |||||||||  | |||| ||||| || || | ||||||||||||||||||| | ||||||||||||||||||    
T  1138598 ttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctctagtgccaatttcggtggac-aagtccatacagagcttt 1138689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 37047023 - 37047102
Alignment:
Q  524 cttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    |||||||| |||||||||  | ||||||||||||||| ||||| || | ||||| |||||||| |||||||||||||||||    
T  37047023 cttggagtgtgctcctctcaaggtctcaggtttgattccccctggtacaaattttggtgggct-agtccatacagagcttt 37047102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 603
Target Start/End: Complemental strand, 19034555 - 19034473
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    |||||||||||||| ||||| | | || ||||||| ||||  | || |||||||||||||||||| ||||||||||||||||||    
T  19034555 gatcttggagtttgttcctcaaaaggtttcaggttcgattatctctggtgccaatttcggtgggc-aagtccatacagagcttt 19034473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 670
Target Start/End: Complemental strand, 40145940 - 40145889
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    |||||||| || | ||||||| |||||||||||||||| |||||||||||||    
T  40145940 agtgggtggtgagtttggtcccctcggattagtcgattcttggatcggatac 40145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 602
Target Start/End: Complemental strand, 40146016 - 40145973
Alignment:
Q  559 ttcccctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||| |||||||||||||  ||||||||||||||||||||||||    
T  40146016 ttcctctagtgccaatttatgtgggctaagtccatacagagctt 40145973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 602
Target Start/End: Complemental strand, 45331740 - 45331709
Alignment:
Q  571 caatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||||||||||||||||||||||    
T  45331740 caatttcggtgggctaagtccatacagagctt 45331709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 628 - 670
Target Start/End: Complemental strand, 8779786 - 8779744
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    |||||||||||| |||||||||||||||| || ||||||||||    
T  8779786 tgggattggtcccctcggattagtcgattcttagatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 619 - 677
Target Start/End: Complemental strand, 37351512 - 37351454
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    |||||| | |||||||||||| ||||||||||||| |  |||||||||||||| |||||    
T  37351512 agtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 599 - 679
Target Start/End: Complemental strand, 8254832 - 8254751
Alignment:
Q  599 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||||||||| | | ||||| | |||||||| ||| || | ||||||||||| ||| |||||||||| |||||||    
T  8254832 gctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagttttc 8254751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 522 - 602
Target Start/End: Original strand, 32930778 - 32930859
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||| |||||  ||| |||||| ||| |||| || || ||||| |||| |||||||||||||||| ||||||||    
T  32930778 atcttggagtttactccttcagaggtctcaagttcgatttcctctggtgcccattttggtgggctaagtccatgcagagctt 32930859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 599 - 679
Target Start/End: Original strand, 48699876 - 48699957
Alignment:
Q  599 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| ||||| | | ||||| | |||||||| |||  ||||||||||||||| |||||||||||| | |||||||    
T  48699876 gctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttttc 48699957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 524 - 600
Target Start/End: Complemental strand, 49101806 - 49101730
Alignment:
Q  524 cttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacagagc 600  Q
    |||||||| |||||||||  | |||| |  ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  49101806 cttggagtgtgctcctctcaaggtcttacatttgattccccctggtgccaatt-cggtgggctaagtccatacagagc 49101730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 3e-35; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 39349279 - 39349458
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  39349279 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 39349378  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  39349379 tttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagttttc 39349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 4718668 - 4718847
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  4718668 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 4718767  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  4718768 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 34237833 - 34237654
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  34237833 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 34237734  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||| | | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  34237733 tttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34237654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 19471632 - 19471812
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || |||||||||| |||| ||||||||||||||||          ||    
T  19471632 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggc 19471731  T
Q  601 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||  |||||  |||||| |||||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  19471732 tttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19471812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 19542556 - 19542736
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || |||||||||| |||| ||||||||||||||||          ||    
T  19542556 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggc 19542655  T
Q  601 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||  |||||  |||||| |||||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  19542656 tttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 19590140 - 19589960
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || |||||||||| |||| ||||||||||||||||          ||    
T  19590140 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggc 19590041  T
Q  601 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||  |||||  |||||| |||||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  19590040 tttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19589960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 512 - 677
Target Start/End: Original strand, 28193497 - 28193674
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||| ||||||||||||||          ||    
T  28193497 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctctggc 28193596  T
Q  601 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    |||||||||||||||    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  28193597 tttaaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 511 - 679
Target Start/End: Complemental strand, 8765705 - 8765525
Alignment:
Q  511 attggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------g 599  Q
    ||||||||  |||||||||||||||||| | |||  ||||||||| ||||||| || |||||||||||| |||||||||||||||||||          |    
T  8765705 attggcttgagatcttggagtttgctcccccagagatctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagcttgctctgg 8765606  T
Q  600 ctttaaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||||| ||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  8765605 ctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 3734801 - 3734622
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  3734801 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 3734702  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  | ||||   |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  3734701 tttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3734622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 512 - 678
Target Start/End: Original strand, 21603253 - 21603431
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||| ||||||||||||| ||| |||||||||| |||||||  | |||||||||||||||||||||| |||||||||          ||    
T  21603253 ttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagcttgctctggc 21603352  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  21603353 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 521 - 678
Target Start/End: Complemental strand, 42643287 - 42643118
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaac-g 608  Q
    |||||||||||||||||||| ||| ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||          ||| |||| |    
T  42643287 gatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctgtcttgaaacgg 42643188  T
Q  609 gggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||  |||||| | |||||||||||| |||| |||||| |||| |||||||||||||| ||||||    
T  42643187 gggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 2618209 - 2618388
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| ||||  |||| ||||||| || ||||||||||| ||||||||||||||||||||          ||    
T  2618209 ttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggc 2618308  T
Q  601 tttaaacgg-ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||| | |||||  |||||| | |||||||||||| |||||||||||||||| ||||||||||| || |||||||    
T  2618309 tttaaacggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagttttc 2618388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 14632977 - 14633156
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||||||||||||||||| |||||||          ||    
T  14632977 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctggc 14633076  T
Q  601 tttaaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||| ||||| ||  ||   |||||| | |||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  14633077 tttgaacggagcgtccacaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagttttc 14633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 511 - 678
Target Start/End: Original strand, 20469939 - 20470117
Alignment:
Q  511 attggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------g 599  Q
    ||||||||  |||||||||||||||||||| ||| |||||||||| ||||||| |||| |||||||| | |||||||||||||||||||          |    
T  20469939 attggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagagccaatttagatgggctaagtccatacagagcttgctctgg 20470038  T
Q  600 ctttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||| | | |||||  |||||| | |||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  20470039 ctttaaacagagcccccgcaagtgggcggtgggattggttc-ctcggattagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 42328028 - 42328206
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  ||||||||||||| |||||| ||| || ||||||||||||||| ||  |||||||||||||||||||||||||||||||          ||    
T  42328028 ttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccctctgttgccaatttcggtgggctaagtccatacagagcttgctctggc 42328126  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| ||||   |||||  |||||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  42328127 tttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 42328206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 521 - 679
Target Start/End: Original strand, 32879311 - 32879481
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagct----------ttaaacgg 609  Q
    |||||| ||||||| ||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||          ||||||||    
T  32879311 gatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctgacattaaacgg 32879410  T
Q  610 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    || ||||   |||||| | |||||||||||| |||||||||||||||| |||||| ||||||| |||||||    
T  32879411 ggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 32879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 15259575 - 15259493
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||| |||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  15259575 gatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 15259493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 27746504 - 27746422
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| | | |||||||||| ||||||| | | |||||||||||||||||||||||||||||||||||    
T  27746504 gatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt 27746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 264577 - 264486
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||| ||||||||||||| |||  ||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  264577 ttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt 264486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 651344 - 651435
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||| ||||||||||||| |||  ||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  651344 ttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt 651435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 837079 - 837170
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||| ||||||||||||| |||  ||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  837079 ttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt 837170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 598
Target Start/End: Original strand, 18532130 - 18532217
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacaga 598  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||||||  || || ||||||||||||||||||||||||||||    
T  18532130 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcagatgtcaatttcggtgggctaagtccatacaga 18532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 599 - 679
Target Start/End: Complemental strand, 2639491 - 2639410
Alignment:
Q  599 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||||||||| | | ||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  2639491 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 521 - 677
Target Start/End: Complemental strand, 7558112 - 7557952
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtcc----atacagagctttaaacggggcccc 615  Q
    |||||||||||||||||||| ||| ||||||| || || |||| || |||||||||| ||||||||||||||     | | | |||||||||||  ||||    
T  7558112 gatcttggagtttgctcctccagaagtctcagattcgatttcctctggtgccaattttggtgggctaagtccgcttgttctg-gctttaaacggaccccc 7558014  T
Q  616 gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    |  |||||  | |||||||||||| |||| ||||||||||||||| |||||||||| |||||    
T  7558013 gcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 20305931 - 20306110
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||| ||||||||||||| | | ||||||| || ||||||  || |||||||||||| |||||||||||||||||||          ||    
T  20305931 ttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggc 20306030  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  20306031 tttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 20306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 21092564 - 21092743
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||| ||||||||||||| | | ||||||| || ||||||  || |||||||||||| |||||||||||||||||||          ||    
T  21092564 ttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggc 21092663  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  21092664 tttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 21092743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 521 - 679
Target Start/End: Complemental strand, 4698892 - 4698722
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||  ||| |||||||||| ||||||| || ||| |||||||||||||||||||||||  |||          |||||||||||    
T  4698892 gatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaacttgctctggctttaaacgg 4698793  T
Q  610 -ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
     | |||||  |||| | | |||||||||||| ||||||||||||||||  ||||| ||||||| |||||||    
T  4698792 agcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagttttc 4698722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 26169017 - 26168936
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||||  | ||||||||||||||||| |||  ||||||||||||||||| |||| ||||||||||||    
T  26169017 gatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtgggc-aagttcatacagagctt 26168936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 2166731 - 2166811
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||| ||| | | |||||||||| ||||||| | ||||||||||| || |||||||||||||||||||||    
T  2166731 gatcttggagtttgcttctccaaaggtctcaggttcgattccc-tcgtgccaatttcagtaggctaagtccatacagagctt 2166811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 546 - 602
Target Start/End: Complemental strand, 6953151 - 6953094
Alignment:
Q  546 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  6953151 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 6953094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 599 - 678
Target Start/End: Original strand, 25248469 - 25248547
Alignment:
Q  599 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| || ||  |||||| | |||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  25248469 gctttaaacgggccctcgcaagtgggcggtgggattggtcccctcggattagtcgattttt-gatcggataccgagtttt 25248547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 512 - 603
Target Start/End: Complemental strand, 34639384 - 34639294
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    |||||||  ||||||||||| |||||||||  | |||||||| | ||| || || ||||||||||||||||| |||||||||||||||||||    
T  34639384 ttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcgatccctctggtgccaatttcggtggg-taagtccatacagagcttt 34639294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 24018414 - 24018496
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| | | |||| ||||| |||| || ||| || ||||||| ||||||||||||||||||||||||    
T  24018414 gatcttggagtttgctcctccaaaggtctgaggttcgatttcctctaatgtcaatttcagtgggctaagtccatacagagctt 24018496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 678
Target Start/End: Original strand, 18128634 - 18128714
Alignment:
Q  599 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||||||||| | | ||||| | |||||||||||||||| ||||||||| || |||||||| ||||| ||||||    
T  18128634 gctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 521 - 584
Target Start/End: Original strand, 15974937 - 15975000
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggc 584  Q
    ||||||||||| |||||||||  | |||||| ||| |||||||||||||| |||||||||||||    
T  15974937 gatcttggagtatgctcctctcaaggtctcaagttcgattcccctagtgcaaatttcggtgggc 15975000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 34610865 - 34610774
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  ||| |||||||||| || || |||||||| ||||| ||||||| ||  ||||||||||||||| ||||||| |||||||||||    
T  34610865 ttggcttaggattttggagtttgttcatccagatgtctgaggttcgattccctctgatgccaatttcggtggtctaagtctatacagagctt 34610774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 9047447 - 9047365
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| | | || | | ||||||||||| ||| ||||||||| ||||| ||||||||||||| |||||    
T  9047447 gatcttggagtttgctcctccaaaggttttaagtttgattccctctaatgccaattttggtggactaagtccatacaaagctt 9047365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 632 - 678
Target Start/End: Original strand, 9713609 - 9713655
Alignment:
Q  632 attggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||| |||||||||||||||| |||||||||||||| ||||||    
T  9713609 attggtccactcggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 28088318 - 28088400
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||| || || ||| ||||||| || ||||||| | | || ||||||||||||| ||||||||||||||||||    
T  28088318 gatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaatttcggtgggttaagtccatacagagctt 28088400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 524 - 586
Target Start/End: Complemental strand, 40137000 - 40136938
Alignment:
Q  524 cttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggcta 586  Q
    |||||||| |||||||||  | |||||||||||||||| ||  ||||||||||||||||||||    
T  40137000 cttggagtgtgctcctctcaaggtctcaggtttgattctcccggtgccaatttcggtgggcta 40136938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 521 - 601
Target Start/End: Original strand, 28964065 - 28964146
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagct 601  Q
    |||||| ||||||||||||||  | || ||| ||| ||||||  || ||||||||||||||||||||||||||||| |||||    
T  28964065 gatcttagagtttgctcctcttaaggtttcatgttcgattccatctggtgccaatttcggtgggctaagtccatacggagct 28964146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 678
Target Start/End: Original strand, 2166838 - 2166897
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | |||||||||||| ||| ||||||||||||||| ||| ||||||| ||||||    
T  2166838 agtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagtttt 2166897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 602
Target Start/End: Original strand, 21667629 - 21667664
Alignment:
Q  567 gtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||| |||||||||||||||||||||||||||||||    
T  21667629 gtgctaatttcggtgggctaagtccatacagagctt 21667664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 679
Target Start/End: Original strand, 33747037 - 33747084
Alignment:
Q  632 attggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |||||||||||||||||  |||||||||||||| |||||||    
T  33747037 attggttctctcggattagtcgatccttggatcggataccgagttttc 33747084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 679
Target Start/End: Complemental strand, 34610733 - 34610686
Alignment:
Q  632 attggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  34610733 attggtcccctcgaattagtcgattcttggatcggataccgagttttc 34610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 628 - 678
Target Start/End: Complemental strand, 6953057 - 6953008
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| |||||||||||||||| |||||||| ||||| ||||||    
T  6953057 tgggattggtcc-ctcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 520 - 584
Target Start/End: Complemental strand, 34694746 - 34694681
Alignment:
Q  520 tgatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggc 584  Q
    ||||||||||||||||||||||  | |||| ||||| ||||||  || ||||||||||||||||||    
T  34694746 tgatcttggagtttgctcctctcaaggtcttaggttcgattccatctggtgccaatttcggtgggc 34694681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 3e-35; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 40059030 - 40058851
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||||||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          ||    
T  40059030 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 40058931  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  40058930 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 521 - 679
Target Start/End: Complemental strand, 34844927 - 34844757
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          |||||||||||    
T  34844927 gatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 34844828  T
Q  610 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    || |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  34844827 ggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 512 - 677
Target Start/End: Original strand, 52983638 - 52983815
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||| ||||||||||||||||||||          ||    
T  52983638 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggc 52983737  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  52983738 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 512 - 676
Target Start/End: Complemental strand, 20078162 - 20077986
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||          ||    
T  20078162 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctggc 20078063  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtt 676  Q
    ||||||||||| |||||  |||||| | ||||||| || | |||||||||||||||| |||||||||||||| ||||    
T  20078062 tttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 27528973 - 27528794
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  27528973 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 27528874  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||| |||||| |||||  |||||| | || ||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  27528873 tttatacggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 32986216 - 32986395
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 600  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||  |||||| || |||||||||||||||||||||||||||||||||          |    
T  32986216 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgac 32986315  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |||| |||||  |||||| | |||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  32986316 tttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagttttc 32986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 46714411 - 46714591
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccccta--gtgccaatttcggtgggctaagtccatacaga----------g 599  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| ||||   ||||||||||||||||||||||||||||||||          |    
T  46714411 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgggctaagtccatacagagcttgcccttg 46714510  T
Q  600 ctttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||| |||||  |||||| | |||||||||||| |||||||||||| ||| ||| |||||||||| |||||||    
T  46714511 ctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagttttc 46714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 512 - 678
Target Start/End: Complemental strand, 33696457 - 33696279
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||  |||||| || ||||||||||||||||||||||||||||||||          ||    
T  33696457 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 33696358  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| |||| |||||  |||||| | || |||||||||||||||||||||| ||| |||||||||||| | ||||||    
T  33696357 tttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 548 - 678
Target Start/End: Original strand, 34723854 - 34723996
Alignment:
Q  548 ctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccggga-gtgggtgatgggattg 635  Q
    |||||||| ||||||| || |||||||||||||||||||||||||||||| |||||          ||||||||||||| | | ||||||| ||||||||    
T  34723854 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattg 34723953  T
Q  636 gtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  34723954 gtcctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 521 - 671
Target Start/End: Complemental strand, 43719234 - 43719094
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacggggccccggga 619  Q
    |||||||||||||||||||| ||| || ||||||| ||||| | ||||||| |||||||||||||||||||||||||||||           |||||  |    
T  43719234 gatcttggagtttgctcctccagaggtttcaggttcgattctctctagtgctaatttcggtgggctaagtccatacagagc-----------ccccgaaa 43719146  T
Q  620 gtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    ||||| | ||||||||||| ||||||||||||||||| ||||||||||||||    
T  43719145 gtgggcggtgggattggtcatctcggattagtcgattcttggatcggatacc 43719094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 19660710 - 19660531
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattc-ccctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||| | ||  ||| |||||||||||| ||||||||||||||          ||    
T  19660710 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctgatgcaaatttcggtgggataagtccatacagagcttgctctggc 19660611  T
Q  601 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||| ||| |||||  |||||| | |||||||| ||| |||||||||||||||| |||||||||||||| |||||||    
T  19660610 tttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 19660531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 25852233 - 25852324
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  25852233 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 25852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 521 - 670
Target Start/End: Original strand, 49287886 - 49288046
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||| | || |||||||||||||||||||||||||||||| |          |||||||||||    
T  49287886 gatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacaaaatttgctatggctttaaacgg 49287985  T
Q  610 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 670  Q
    |  ||||  |||||| | || ||||||||| |||||||||||||||| ||||||| |||||    
T  49287986 gctcccgcaagtgggcgctgagattggtcccctcggattagtcgattcttggatcagatac 49288046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 54127520 - 54127341
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| | | ||||||||||  |||||| || |||||||||||||||||||||||| |||||||          ||    
T  54127520 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagcttgctctggc 54127421  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| ||||||||||||| || ||||| |||||||  |||||||    
T  54127420 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatactgagttttc 54127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 22625248 - 22625157
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  ||||||||||||| |||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  22625248 ttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 22625157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 13550236 - 13550318
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||| |||||||||||||||||| ||||||||  | |||||| |||||||||||||||||||||||||||||||| ||||||    
T  13550236 gatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgggctaagtccataccgagctt 13550318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 5609380 - 5609201
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  ||||||||||||||||| |  ||  |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          ||    
T  5609380 ttggcttgggatcttggagtttgctcattcagtggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 5609281  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |||| |||||  |||||  | |||||||| ||| |||||||||||||||| |||||||||||||| |||||||    
T  5609280 tttaaatggggcccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 5609201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 525 - 677
Target Start/End: Complemental strand, 20527198 - 20527035
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc----------tttaaacggggcc 613  Q
    |||||||||| ||||| ||| |||||| ||||||||||| || | |||||||||||||||||||||||||| |||||          ||||||| |||||    
T  20527198 ttggagtttgttcctccagaggtctcaagtttgattccctctggcgccaatttcggtgggctaagtccatatagagcttgatttcggtttaaacagggcc 20527099  T
Q  614 ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 677  Q
    |||  |||||| | | |||||||||  ||||||||||||||||||||||||  ||||| |||||    
T  20527098 ccgtaagtgggcggtaggattggtctcctcggattagtcgatttttggatcaaataccgagttt 20527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 512 - 678
Target Start/End: Original strand, 20566368 - 20566547
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtc-tcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------g 599  Q
    |||||||  |||||||||||||||||||| ||| ||  ||||||| ||||||| || |||||||||||||||||| |||||||||||||          |    
T  20566368 ttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagcttgctctgg 20566467  T
Q  600 ctttaaacgg-ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||| | |||||  |||||| | |||||||||||| ||| |||||||||||| |||||||||||| | ||||||    
T  20566468 ctttaaacggagcccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 35229187 - 35229277
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||  ||| ||||||||||||||||||||||||||||| |||||    
T  35229187 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttcta-tgccaatttcggtgggctaagtccatacatagctt 35229277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 525 - 679
Target Start/End: Complemental strand, 36131675 - 36131509
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacagag----------ctttaaacggg-gc 612  Q
    |||||||| | ||||| |||||||||||||| |||||||  | |||||||||||||||| ||||||||||||||||          |||||||||||  |    
T  36131675 ttggagttcgttcctccagatgtctcaggttcgattccctatggtgccaatttcggtggcctaagtccatacagagcttgctatgactttaaacgggacc 36131576  T
Q  613 cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||  |||||| | |||||||||||| |||||||||||||||| || |||| |||||| |||||||    
T  36131575 cccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagttttc 36131509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 546 - 679
Target Start/End: Original strand, 32990488 - 32990633
Alignment:
Q  546 gtctcaggtttgattcccct-agtgccaatttcggtgggctaagtccatacaga----------gctttaaacgggg-ccccgggagtgggtgatgggat 633  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||          ||||||||||||| |||||  |||||| | ||||||    
T  32990488 gtctcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggat 32990587  T
Q  634 tggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |||||| ||||||||| |||||||| ||||  |||||||    
T  32990588 tggtcccctcggactagtcgattcttggatcgaatactgagttttc 32990633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 33992654 - 33992736
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| ||| |||| ||||| ||||| | || |||||||||||||||||||||||||||||| |||||    
T  33992654 gatcttggagtttgctcctccagaggtcttaggttcgattctctctggtgccaatttcggtgggctaagtccatacatagctt 33992736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 599
Target Start/End: Original strand, 1985855 - 1985943
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||||||  | |||| ||||||| ||||||||||||||||||||    
T  1985855 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgcgaatttcgatgggctaagtccatacagag 1985943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 546 - 669
Target Start/End: Complemental strand, 9517785 - 9517650
Alignment:
Q  546 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccgggag-tgggtgatgggat 633  Q
    |||||||||| ||||| | || ||||||||||| ||||||||||||||||||||||||          ||||||||||||| | || |||||| || |||    
T  9517785 gtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaggtgggtggtgagat 9517686  T
Q  634 tggtcctctcggattagtcgatttttggatcggata 669  Q
    |||||| |||||||||||||||| ||||||||||||    
T  9517685 tggtcccctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 44343533 - 44343712
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 602  Q
    |||||||  |||||||||||||||||| | | | | |||| ||| ||||||| || |||| ||||| |||||||||||||||||||||||||            
T  44343533 ttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctggtgctaattttggtgggctaagtccatacagagcttgctctgac 44343632  T
Q  603 --taaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
      |||||||||| ||||  |||||| | |||||||||||| |||| ||||||||||| ||| |||||||||| |||||||    
T  44343633 tttaaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagttttc 44343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 35674919 - 35674828
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  ||||||||||||||||| || | | ||| |||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  35674919 ttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 35674828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 12500227 - 12500145
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||  | | |||||||||||||||||| || |||||||||||  ||||||||||||||||| |||||    
T  12500227 gatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagctt 12500145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 522 - 679
Target Start/End: Complemental strand, 45787871 - 45787703
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaac-gg 609  Q
    |||||||| |||||||||| |||  ||||||||| ||||||| ||  |||||||||| ||||||||||||||||||||          ||||||||| ||    
T  45787871 atcttgga-tttgctcctccagagatctcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacagg 45787773  T
Q  610 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    | |||||  |||||  | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  45787772 gcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 621 - 678
Target Start/End: Complemental strand, 55158400 - 55158343
Alignment:
Q  621 tgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  55158400 tgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 547 - 679
Target Start/End: Complemental strand, 18875659 - 18875516
Alignment:
Q  547 tctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccgggagtgggtgatgggattg 635  Q
    ||||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||          |||||||| ||||   |||||||  ||||||||    
T  18875659 tctcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccacaagtgggtagtgggattg 18875560  T
Q  636 gtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
     ||| |||||||||||| ||||||||||| |||||| |||||||    
T  18875559 atcccctcggattagtcaatttttggatcagataccgagttttc 18875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 521 - 599
Target Start/End: Complemental strand, 13873464 - 13873385
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||||||||||||||  | | |||||||||| ||||||| || |||||||||||||| |||||||| |||||||||    
T  13873464 gatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaatttcggtaggctaagttcatacagag 13873385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 32942389 - 32942480
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  ||||||||||||| |||||| ||| || | ||||| ||||| | ||  |||||||||||||||||||||||||||||||||||    
T  32942389 ttggcttgagatcttggagtttactcctccagaggtttaaggttcgattctctctgatgccaatttcggtgggctaagtccatacagagctt 32942480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 619 - 669
Target Start/End: Original strand, 4064998 - 4065048
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggata 669  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||    
T  4064998 agtgggcggtgggattggtcccctcggattagtcgatttttggatcggata 4065048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 628 - 678
Target Start/End: Original strand, 23639771 - 23639821
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  23639771 tgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 628 - 678
Target Start/End: Original strand, 23645429 - 23645479
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  23645429 tgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 512 - 601
Target Start/End: Original strand, 34835548 - 34835638
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagct 601  Q
    |||||||  |||||| ||||||||||||||  | |||||| ||| ||||||| || ||| ||||||||||||||||||||||||| |||||    
T  34835548 ttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctggtgtcaatttcggtgggctaagtccatacggagct 34835638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 522 - 602
Target Start/End: Original strand, 2351042 - 2351123
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||| |||||||||||| ||| |||||||||| ||||||| || |||||||||||||| | |||| |||||||| |||||    
T  2351042 atcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtcgactaaatccatacatagctt 2351123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 634 - 679
Target Start/End: Complemental strand, 21387531 - 21387486
Alignment:
Q  634 tggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  21387531 tggtcccctcggattagtcgattattggatcggataccaagttttc 21387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 51535641 - 51535727
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggc----taagtccatacagagctt 602  Q
    |||||||||||||||||||| | | |||||||||| ||||||| || |||||||||| |||||||    ||||||||||||||||||    
T  51535641 gatcttggagtttgctcctccacaggtctcaggttcgattccctctggtgccaattttggtgggctaattaagtccatacagagctt 51535727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 599
Target Start/End: Complemental strand, 7392141 - 7392054
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||  |||||||||||||||||||| | | |||||||||| |||||||  | |||||||||||||| || |||||||||||||||    
T  7392141 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttcggt-ggttaagtccatacagag 7392054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 603
Target Start/End: Complemental strand, 41621774 - 41621683
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    |||||||  |||||||||||||||||||||  | |||||| |||||| |||| || |||||||||| ||||||| || |||||||||||||||    
T  41621774 ttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtgggc-aaatccatacagagcttt 41621683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 567 - 602
Target Start/End: Complemental strand, 29875897 - 29875862
Alignment:
Q  567 gtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||||||||||||||||||||||||||    
T  29875897 gtgccaatttcggtgggctaagtccatacagagctt 29875862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 619 - 678
Target Start/End: Original strand, 52494626 - 52494685
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  52494626 agtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 567 - 602
Target Start/End: Complemental strand, 55961875 - 55961840
Alignment:
Q  567 gtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||||||||||||||||||||||||||    
T  55961875 gtgccaatttcggtgggctaagtccatacagagctt 55961840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 13584419 - 13584341
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||| | | |||||| ||| ||||||| || ||| |||||||| ||||||||||||||| |||||||    
T  13584419 ttggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagctt 13584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 619 - 671
Target Start/End: Original strand, 37302625 - 37302677
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    |||||| ||||||||||||||  ||||||||||||||| ||| ||||||||||    
T  37302625 agtgggcgatgggattggtcccttcggattagtcgattcttgaatcggatacc 37302677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 678
Target Start/End: Original strand, 25852353 - 25852412
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||  ||||||||||||| ||||||||||||| || ||||| |||||||| ||||||    
T  25852353 agtgggcaatgggattggtcccctcggattagtcggttcttggaccggataccgagtttt 25852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 671
Target Start/End: Original strand, 35229315 - 35229358
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    |||||||||||| |||| ||||||||||| ||||||||||||||    
T  35229315 tgggattggtcccctcgaattagtcgattcttggatcggatacc 35229358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 525 - 587
Target Start/End: Original strand, 37455609 - 37455671
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaa 587  Q
    ||||||| |||||||||  | |||||||||| ||||||||| |||||||||||  ||||||||    
T  37455609 ttggagtatgctcctctcaaggtctcaggttcgattcccctggtgccaatttcaatgggctaa 37455671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 630 - 679
Target Start/End: Complemental strand, 23131484 - 23131435
Alignment:
Q  630 ggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||| |||| ||||||||||| || ||||||||||| |||||||    
T  23131484 ggattggtcccctcgaattagtcgattcttcgatcggataccgagttttc 23131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 5e-34; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 521 - 678
Target Start/End: Original strand, 25293194 - 25293356
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccata---cagagctttaaacgggg--ccc 614  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||| ||||   | | |||||||||||||  |||    
T  25293194 gatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatagctctg-gctttaaacggggccccc 25293292  T
Q  615 cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||  |||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  25293293 cgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 44946231 - 44946052
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| | | |||||||||||||||||||||||||||||||          ||    
T  44946231 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagaacttgctctggc 44946132  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  44946131 tttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 44946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 33827751 - 33827572
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||| ||||||||| ||| |||||||||| ||||||| || |||||||||||| |||||||||||||||||||          ||    
T  33827751 ttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagagcttgctctggc 33827652  T
Q  601 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||| |||| |  |||||| | |||||||||||| || ||||||||||||| |||||||||||||| |||||||    
T  33827651 tttaaacgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 524 - 679
Target Start/End: Original strand, 35171831 - 35171998
Alignment:
Q  524 cttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgggg- 611  Q
    ||||||||||||||||| ||| |||||||||| ||||||| || |  |||||||||||||||||||||||||||||          |||||||||||||     
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggc 35171930  T
Q  612 ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  35171931 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 10582168 - 10582077
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  10582168 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 10582077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 521 - 679
Target Start/End: Original strand, 15037987 - 15038157
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| | | |||||||||| ||||||| | | |||||||||||||||||||||||||||||||          |||||||||||    
T  15037987 gatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacgg 15038086  T
Q  610 -ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
     | |||||  |||||| | |||||||||||| ||| |||||||||||| |||||||||||||| |||||||    
T  15038087 agcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 522 - 602
Target Start/End: Original strand, 17324795 - 17324876
Alignment:
Q  522 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  17324795 atcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 17324876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 34516586 - 34516413
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacagagctt--------- 602  Q
    |||||||  |||||||||||||||||||| ||| || ||||||| |||||     |||  |||||||||||||||||||||||||||||||             
T  34516586 ttggcttgggatcttggagtttgctcctccagaggtttcaggttcgattcg----gtggtaatttcggtgggctaagtccatacagagcttgctctcgct 34516491  T
Q  603 -taaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
     |||||||| ||| |  |||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  34516490 ttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 678
Target Start/End: Complemental strand, 11941388 - 11941210
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||  ||||||  | |||||||||| |||||| ||||||||||||||          ||    
T  11941388 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatggtgccaattttggtgggttaagtccatacagagcttgctctggc 11941289  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  11941288 tttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 27290607 - 27290698
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| | | |||||||||||||||||||||||||||||||||||    
T  27290607 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagctt 27290698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 512 - 678
Target Start/End: Original strand, 13266509 - 13266686
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 602  Q
    |||||||  ||||||||| ||||||||| |||| |||||| ||| ||||| | || ||||||||| |||||| |||||||||||||||||||            
T  13266509 ttggcttgagatcttggaatttgctcctttagaggtctcatgttcgattcactctggtgccaattccggtggactaagtccatacagagcttgctctggc 13266608  T
Q  603 --taaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
      ||||||||||||||  ||||||| ||||||||||||| |||  ||||||||||| |||||||||||| | ||||||    
T  13266609 tttaaacggggccccgcaagtgggtaatgggattggtcccctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 521 - 679
Target Start/End: Original strand, 41314020 - 41314189
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||| |||||||||||||||||||| ||||||||          ||||||||||    
T  41314020 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtctatacagagcttgctctgactttaaacgg 41314119  T
Q  610 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |  ||||  |||||  | |||||||||||| ||| ||||| |||||| || |||||||||||||||||||    
T  41314120 gatcccgcaagtggacggtgggattggtcccctcagattaatcgattcttcgatcggataccaagttttc 41314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 512 - 599
Target Start/End: Original strand, 1191532 - 1191620
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||    
T  1191532 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccctctagtaccaatttcggtgggctaagtccatacagag 1191620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 36242490 - 36242311
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 602  Q
    |||||||  ||||||| | |||||||||| ||| |||||||||| ||||||| || ||| ||||||||||||||||||||||  ||||||||            
T  36242490 ttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagcttgctctggc 36242391  T
Q  603 --taaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
      ||||||||| |||||  |||||| | |||||||||||| ||||||||| |||||| |||||||||||||||| |||||    
T  36242390 tttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccaaattttc 36242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 24196023 - 24196200
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  ||| |||| ||| ||||||| ||| || ||||||| ||||||| || |||| |||||||||||||||||||||||||||          ||    
T  24196023 ttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaacttgctctggc 24196122  T
Q  601 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||| |||||  |||||| | |||||||||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  24196123 tttaaacggg-ccccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagttttc 24196200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 525 - 678
Target Start/End: Complemental strand, 30466995 - 30466830
Alignment:
Q  525 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaa-cggggc 612  Q
    |||||||||| ||||||||| |||||||||| ||||| | ||  |||||||||||||||||||||||||||||||          |||||||| |||| |    
T  30466995 ttggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaccgggcc 30466896  T
Q  613 cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||  ||||||   ||||||||||||  ||||||||||||||| |||||||||||||| ||||||    
T  30466895 cccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 567 - 679
Target Start/End: Original strand, 3943815 - 3943938
Alignment:
Q  567 gtgccaatttcggtgggctaagtccatacagagctt----------taaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgat 655  Q
    |||||||||||||| |||||||||||||||||||||          |||||||||| ||||  |||||||| |||||||||||| || |||||||||| |    
T  3943815 gtgccaatttcggttggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcggt 3943914  T
Q  656 ttttggatcggataccaagttttc 679  Q
    | ||||||||||||||||||||||    
T  3943915 tattggatcggataccaagttttc 3943938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 567 - 679
Target Start/End: Original strand, 28668948 - 28669071
Alignment:
Q  567 gtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgat 655  Q
    |||||||||||||||| |||||||||||||||||||          |||||||||||||   | ||||| | |||||||||||| |||||||||||||||    
T  28668948 gtgccaatttcggtggactaagtccatacagagcttgctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgat 28669047  T
Q  656 ttttggatcggataccaagttttc 679  Q
    |||||||||||||||| |||||||    
T  28669048 ttttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 512 - 599
Target Start/End: Complemental strand, 44976332 - 44976244
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||  |||||||| ||||||||||| ||| |||||||||| ||||||| || |||||||||| ||||||||||||||||||||||    
T  44976332 ttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagag 44976244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 521 - 656
Target Start/End: Original strand, 32845119 - 32845251
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacggggcccc-ggg 618  Q
    |||||||||||||||||||| | | || ||||||| ||||||| || ||||||||||||||||||||||||||||     |||||||| ||||||| |      
T  32845119 gatcttggagtttgctcctccaaaagtttcaggttcgattccctctggtgccaatttcggtgggctaagtccata-----ctttaaacagggcccctgca 32845213  T
Q  619 agtgggtgatgggattggtcctctcggattagtcgatt 656  Q
    |||||| | ||||||||||||  ||| |||||||||||    
T  32845214 agtgggcggtgggattggtcccttcgaattagtcgatt 32845251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 599
Target Start/End: Original strand, 5394036 - 5394124
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||| |||||||| ||||||||||||||||||||    
T  5394036 ttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacagag 5394124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 4567615 - 4567524
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  ||||||| |||||||||||  ||| |||||||||| |||| || || ||||||||||||||||||||| ||||||||||||||    
T  4567615 ttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatttcctctggtgccaatttcggtgggctaaatccatacagagctt 4567524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 43374503 - 43374412
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||||| || |||||||||||||||||||||||  ||||| |||||    
T  43374503 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagctt 43374412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 8258925 - 8259003
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga 598  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||   |||||||| |||||| ||||||||||||||    
T  8258925 gatcttggagtttgctcctccagatgtctcaggttcgattccctctgacgccaattttggtgggttaagtccatacaga 8259003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 586 - 679
Target Start/End: Original strand, 14486929 - 14487023
Alignment:
Q  586 aagtccatacagagctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||||||||||  ||||||||||| | | ||||| | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  14486929 aagtccatacagagcttagaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 14487023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 619 - 679
Target Start/End: Complemental strand, 2140545 - 2140485
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  2140545 agtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 511 - 602
Target Start/End: Original strand, 19054043 - 19054135
Alignment:
Q  511 attggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||  ||||||||||| |||||||| | | |||||||||||||||||  || |||  || ||||||||||||||||||||||||||||    
T  19054043 attggcttgagatcttggagtctgctcctccaaaggtctcaggtttgattccttctggtgttaacttcggtgggctaagtccatacagagctt 19054135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 628 - 679
Target Start/End: Complemental strand, 4567479 - 4567428
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  4567479 tgggattggtcctctcggattagtcaattcttggatcggatacccagttttc 4567428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 512 - 602
Target Start/End: Original strand, 45271403 - 45271494
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||| ||||||||| ||| ||| || ||| ||| ||||||| || ||||||||||| ||||||||||||||||||||||||    
T  45271403 ttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt 45271494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 546 - 599
Target Start/End: Complemental strand, 23787152 - 23787098
Alignment:
Q  546 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||||||||||||| || ||||||||||||||||||||| |||||||||||    
T  23787152 gtctcaggtttgattccctctggtgccaatttcggtgggctaaatccatacagag 23787098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 601 - 678
Target Start/End: Original strand, 4852649 - 4852726
Alignment:
Q  601 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||||||||  |||||  | ||| |||||||| ||||||||| |||||| ||||||||||| |||||||||    
T  4852649 tttaaacggggccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagtttt 4852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 603
Target Start/End: Complemental strand, 8192529 - 8192438
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 603  Q
    |||||||  ||||||||||| |||||||||  | |||||||||| ||||||| || |||||||| ||||||||| ||||||||| ||||||||    
T  8192529 ttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggc-aagtccatatagagcttt 8192438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 679
Target Start/End: Original strand, 18692098 - 18692158
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  18692098 agtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttc 18692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 679
Target Start/End: Original strand, 19054164 - 19054224
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| | |||||||||||| |||||||||||||||| ||||||| |||||| |||||||    
T  19054164 agtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagttttc 19054224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 679
Target Start/End: Original strand, 39957896 - 39957956
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |||||||||||| | |||||||||||||||| |||||| ||||||| |||||||    
T  39957896 agtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttc 39957956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 512 - 590
Target Start/End: Complemental strand, 6714459 - 6714380
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtc 590  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||  ||||    |||||||||||||||||||    
T  6714459 ttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattccatctagcattaatttcggtgggctaagtc 6714380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 512 - 591
Target Start/End: Complemental strand, 18976603 - 18976524
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtcc 591  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||| |||||||   | |||||||||||||| ||||||||    
T  18976603 ttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgagccaatttcggtggactaagtcc 18976524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 628 - 679
Target Start/End: Complemental strand, 43374380 - 43374329
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||||  ||||||||||||||| |||||||||||||| |||||||    
T  43374380 tgggattggtcccttcggattagtcgattcttggatcggataccgagttttc 43374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 40997519 - 40997437
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| | | |||||| |||  ||||||| |||| |||||||||||| | |||||| |||||||||||    
T  40997519 gatcttggagtttgctcctccaaaggtctcatgttcaattccccctagtaccaatttcggtgagataagtcaatacagagctt 40997437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 512 - 600
Target Start/End: Complemental strand, 28194311 - 28194223
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc 600  Q
    |||||||  ||||||||||| |||||||||  | |||| ||||| ||||| | || |||||||||||||||||| |||||||||||||||    
T  28194311 ttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtgggc-aagtccatacagagc 28194223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 512 - 600
Target Start/End: Original strand, 40591202 - 40591290
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagc 600  Q
    |||||||  ||||||||||| |||||||||  | ||||||||||||| |||  || ||| |||||||||||||| |||||||||||||||    
T  40591202 ttggcttgagatcttggagtgtgctcctctcaaagtctcaggtttgatttcttctggtggcaatttcggtgggc-aagtccatacagagc 40591290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 630 - 671
Target Start/End: Original strand, 45132436 - 45132477
Alignment:
Q  630 ggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  45132436 ggattggtcctctcggattaatcgattcttggatcggatacc 45132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 619 - 671
Target Start/End: Complemental strand, 18976514 - 18976462
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 671  Q
    |||||| | |||||||||||| |||| ||||||||||| ||||||||||||||    
T  18976514 agtgggcggtgggattggtcccctcgaattagtcgattcttggatcggatacc 18976462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 512 - 599
Target Start/End: Complemental strand, 19606023 - 19605936
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    |||||||  |||||||||||  ||||||||  | |||||||||| ||||||| ||| ||| ||||||||||||| ||||||||||||||    
T  19606023 ttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccctctaatgctaatttcggtgggc-aagtccatacagag 19605936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 602
Target Start/End: Complemental strand, 918819 - 918784
Alignment:
Q  567 gtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||| |||||||||||||||||||||||    
T  918819 gtgccaatttcgttgggctaagtccatacagagctt 918784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 678
Target Start/End: Complemental strand, 27269403 - 27269344
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | |||||||| ||| |||||||||||||||| |||||| ||||||| ||||||    
T  27269403 agtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 679
Target Start/End: Original strand, 27290729 - 27290772
Alignment:
Q  636 gtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||| |||||||||||||||| |||||||||||||| |||||||    
T  27290729 gtcccctcggattagtcgattcttggatcggataccgagttttc 27290772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 602
Target Start/End: Complemental strand, 36390730 - 36390655
Alignment:
Q  528 gagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    ||||||||| ||| | | |||||||||| |||| || || |||||||||||||||| ||||||||||||| |||||    
T  36390730 gagtttgcttctccaaaggtctcaggttcgatttcctctggtgccaatttcggtggactaagtccatacaaagctt 36390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 628 - 678
Target Start/End: Complemental strand, 44929896 - 44929846
Alignment:
Q  628 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||||||||| || | ||||||||||| |||||||||||||| ||||||    
T  44929896 tgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 630 - 679
Target Start/End: Complemental strand, 1501511 - 1501463
Alignment:
Q  630 ggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  1501511 ggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 1501463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 604
Target Start/End: Original strand, 29698166 - 29698258
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagcttta 604  Q
    |||||||  ||||||||| |||||||||||  | |||||| |||| | |||| || ||| |||||||||||||| |||| ||||||||||||||    
T  29698166 ttggcttgggatcttggaatttgctcctctcaaggtctcaagttttatttcctctggtgtcaatttcggtgggc-aagttcatacagagcttta 29698258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 512 - 678
Target Start/End: Complemental strand, 7487 - 7309
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 600  Q
    |||||||  |||||||||||||||||||| |||  ||||||||| ||||||| |  |||||||||||||||||||||||||||||||||          |    
T  7487 ttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctttctctggc 7388  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  7387 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 5260 - 5081
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  5260 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 5161  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  | |||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  5160 tttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 40344 - 40522
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  40344 ttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 40443  T
Q  601 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  40444 tttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagttttc 40522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 161828 - 162007
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc---------- 600  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||              
T  161828 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 161927  T
Q  601 -tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
     |||||  ||| |||||  |||||| | |||||||||||| |||||||||||||||| ||||||| |||||| |||||||    
T  161928 ttttaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 162007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 5e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 512 - 678
Target Start/End: Complemental strand, 97544 - 97366
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 600  Q
    |||||||  ||||||| |||||||||||| | | |||||||||| ||||||| || |||||||||||||||||||||||||||||||||          |    
T  97544 ttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgac 97445  T
Q  601 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||||||  |||||  |||||| | ||||||||||||||||| |||||||| |||||||| |||||||| ||||||    
T  97444 tttaaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagtttt 97366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 512 - 679
Target Start/End: Complemental strand, 53049 - 52870
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 600  Q
    |||||||  |||||||||||||||||||| ||| |  ||||||| ||||||| || |||||||||||||||||| || ||||||||||          ||    
T  53049 ttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagcttgctctggc 52950  T
Q  601 tttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||||||||||||| | | ||||| | | ||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  52949 tttaaacggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagttttc 52870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 1234 - 1143
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  1234 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 1143  T

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Target: scaffold0366 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 9477 - 9386
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  9477 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 9386  T

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Target: scaffold0366; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 12178 - 12087
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| || || | ||||||||||||||||||||||||||||||||||    
T  12178 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagctt 12087  T

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Target: scaffold0102 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 532 - 679
Target Start/End: Original strand, 39131 - 39290
Alignment:
Q  532 ttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacggggccccggga- 619  Q
    ||||||||| ||| |||||| ||| ||||||| || |||||||||||||||||||| |||||||||||          ||||||||||||||||| | |     
T  39131 ttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaa 39230  T
Q  620 gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    ||||| | |||||||||||| |||||||||||||||| ||||||| |||||| |||||||    
T  39231 gtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 39290  T

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Target: scaffold0459 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 512 - 602
Target Start/End: Complemental strand, 10871 - 10780
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| || || | ||||||||||||||||||||||||||||||||||    
T  10871 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagctt 10780  T

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Target: scaffold0068 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 521 - 679
Target Start/End: Complemental strand, 41813 - 41644
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 609  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || || ||||||||| || ||||||||||||||||          |||||||||||    
T  41813 gatcttggagtttgctcctccagaggtctcaggttcgattccctcttgttccaatttcgttgtgctaagtccatacagagcttgctctggctttaaacgg 41714  T
Q  610 ggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 679  Q
    |||||| |  ||||||  ||||||||||||| |||||||||||||||| || ||||||||||  |||||||    
T  41713 ggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattctt-gatcggatacagagttttc 41644  T

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Target: scaffold0717 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 599
Target Start/End: Complemental strand, 136 - 48
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 599  Q
    ||||||| |||||||||||||||||| || ||| |||||||||| ||||||| ||  || |||||||| ||||||||||||||||||||    
T  136 ttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattccctcttatgtcaatttcgatgggctaagtccatacagag 48  T

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Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 15019 - 15101
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||| ||| ||||||||||  |||||| || |||| |||||||||||| ||||||||| ||||||||    
T  15019 gatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgctaatttcggtgggttaagtccatccagagctt 15101  T

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Target: scaffold0328; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 567 - 678
Target Start/End: Complemental strand, 13166 - 13047
Alignment:
Q  567 gtgccaatttcggtgggctaagtccatacagag-------ctttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttt 658  Q
    ||||||||||||||||| |||||||||||||||       |||||||||||| |||||  |||||  | |||||||| ||| ||| ||||||| |||| |    
T  13166 gtgccaatttcggtgggttaagtccatacagagcttgctactttaaacggggcccccgcaagtggacggtgggattgatcccctcagattagttgattct 13067  T
Q  659 tggatcggataccaagtttt 678  Q
    ||||||||||||| ||||||    
T  13066 tggatcggataccgagtttt 13047  T

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Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 20250 - 20332
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 602  Q
    |||||||||||||||||||  | | |||||||||||||||||| || |||||||||||  ||||||||||||||||| |||||    
T  20250 gatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagctt 20332  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 512 - 678
Target Start/End: Original strand, 66781 - 66951
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtc-catacagag-ctttaaacg 608  Q
    |||||||  |||||||||||||||||||| | | |||||| ||| ||||||  || |||||||||| ||||||||||||| | | |   | |||||||||    
T  66781 ttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattccttctggtgccaattttggtgggctaagtcgcttgctctggctttaaacg 66880  T
Q  609 gggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    ||||||| | | ||||| | |||||||||||| ||||||||||||| |  |||||||||||||| ||||||    
T  66881 gggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

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Target: scaffold0016 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 569 - 679
Target Start/End: Original strand, 32365 - 32485
Alignment:
Q  569 gccaatttcggtgggctaagtccatacagagctt----------taaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgattt 657  Q
    ||||||||||||||||||||||||||||||||||          |||| | |||||| | | ||||||| |||||||||||| ||||||||||||||||     
T  32365 gccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggattagtcgattc 32464  T
Q  658 ttggatcggataccaagttttc 679  Q
    || ||||||||||| |||||||    
T  32465 tt-gatcggataccgagttttc 32485  T

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Target: scaffold0199 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 619 - 678
Target Start/End: Complemental strand, 8510 - 8451
Alignment:
Q  619 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 678  Q
    |||||| | |||||||||||| |||||||||||||||| || ||||||||||| ||||||    
T  8510 agtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

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Target: scaffold0199; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 512 - 584
Target Start/End: Complemental strand, 8585 - 8512
Alignment:
Q  512 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggc 584  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||  | || ||||||||||||||||||    
T  8585 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctggtgccaatttcggtgggc 8512  T

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Target: scaffold0020 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 568 - 678
Target Start/End: Complemental strand, 123172 - 123066
Alignment:
Q  568 tgccaatttcggtgggctaagtccatacagagctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcgga 667  Q
    ||||||||||||||||| |||||||||| |  |||  ||| |||||||   |||| ||| |||||||||||| ||||||||| ||||| || ||||||||    
T  123172 tgccaatttcggtgggc-aagtccatacgg--cttagaacagggccccacaagtgtgtggtgggattggtcccctcggattaatcgatctt-ggatcgga 123077  T
Q  668 taccaagtttt 678  Q
    |||||||||||    
T  123076 taccaagtttt 123066  T

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Target: scaffold0460 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 8348 - 8286
Alignment:
Q  521 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgg 582  Q
    |||||||||||||||||||| ||| |||||| ||| ||||||| || ||||||||||||||||    
T  8348 gatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 8286  T

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Target: scaffold0200 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 675
Target Start/End: Complemental strand, 26648 - 26605
Alignment:
Q  632 attggtcctctcggattagtcgatttttggatcggataccaagt 675  Q
    |||||||| |||| |||||||||||||||||||| |||||||||    
T  26648 attggtcccctcgaattagtcgatttttggatcgaataccaagt 26605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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