View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14701_high_2 (Length: 453)
Name: NF14701_high_2
Description: NF14701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14701_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 420; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 1 - 443
Target Start/End: Original strand, 7934503 - 7934946
Alignment:
| Q |
1 |
gcaccacatttggtaacccctgttccattttttcctgtgtattatgtaatatttctcatgaaaaatacataatattttgttcgttattctttcattccat |
100 |
Q |
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| T |
7934503 |
gcaccacatttggtaacccctgttccattttttcctgtgtattatgtaatatttctcatgaaaaatacataatattttgttcattattctttcattccat |
7934602 |
T |
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| Q |
101 |
tgttacaatatgtgccatagacgagttctttgtttctcattgttacaatatgtgccatagacgagttctttgtttctcgataagattcagattttagatt |
200 |
Q |
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| T |
7934603 |
tgttacaatatgtgccatagacgagttctttgtttctcattgttacaatatgtgccatagacgagttctttgtttctcgataagattcagattttagatt |
7934702 |
T |
|
| Q |
201 |
aaaaaataataattggtcataagataccatttagtgactacctatgatgattatatgaattaatatttaaccaaaagttaaggccaatgttttgcatagt |
300 |
Q |
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| T |
7934703 |
aaaaaataataattggtcataagataccatttagtgactacctaggatgattatatgaattaatatttaaccaaaagttaaggccaatgttttgcatagt |
7934802 |
T |
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| Q |
301 |
ttgctttgttgggaacaatgtttatctccattacaaacaaatgtttcatcattatcttatttttcattgttgtgtcttatgtacatccattatataaatg |
400 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7934803 |
ttgctttgttgggaacaatgtttgtctccattacaaacaaatgtttcatcattatcttatttttcattgttgtgtcttatgtacatccattatataaatg |
7934902 |
T |
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| Q |
401 |
caatggcctt-gcataattgtccacactgataccctcccctttg |
443 |
Q |
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| T |
7934903 |
caatggccttcacataattgtccacactgataccctcccctttg |
7934946 |
T |
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