View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14701_high_3 (Length: 382)

Name: NF14701_high_3
Description: NF14701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14701_high_3
NF14701_high_3
[»] chr3 (28 HSPs)
chr3 (1-135)||(34897806-34897940)
chr3 (287-382)||(34898023-34898118)
chr3 (113-238)||(1995448-1995573)
chr3 (124-198)||(52859272-52859346)
chr3 (130-238)||(19830394-19830502)
chr3 (130-238)||(27033655-27033763)
chr3 (130-238)||(43719910-43720018)
chr3 (128-238)||(10474400-10474509)
chr3 (169-238)||(2229987-2230056)
chr3 (130-238)||(29586340-29586447)
chr3 (131-234)||(44637950-44638052)
chr3 (164-238)||(54911658-54911732)
chr3 (165-238)||(33632827-33632899)
chr3 (169-238)||(34373835-34373904)
chr3 (130-226)||(24754673-24754769)
chr3 (130-226)||(24763670-24763766)
chr3 (123-238)||(48084823-48084939)
chr3 (175-238)||(34373593-34373656)
chr3 (165-238)||(31523666-31523739)
chr3 (130-238)||(51982549-51982656)
chr3 (128-197)||(30235416-30235484)
chr3 (130-235)||(40851781-40851886)
chr3 (165-238)||(42613084-42613157)
chr3 (169-238)||(46167397-46167466)
chr3 (165-238)||(49679268-49679341)
chr3 (173-237)||(25285843-25285907)
chr3 (135-223)||(47750274-47750361)
chr3 (165-226)||(550814-550875)
[»] chr6 (23 HSPs)
chr6 (122-238)||(7215807-7215923)
chr6 (122-238)||(2800566-2800682)
chr6 (121-238)||(4804452-4804569)
chr6 (130-238)||(7162088-7162196)
chr6 (130-238)||(21159332-21159440)
chr6 (172-238)||(27826542-27826608)
chr6 (130-238)||(17828532-17828639)
chr6 (130-238)||(17944166-17944274)
chr6 (169-238)||(12412641-12412710)
chr6 (169-238)||(13089751-13089820)
chr6 (132-226)||(23936269-23936365)
chr6 (165-238)||(24484883-24484956)
chr6 (130-238)||(227526-227635)
chr6 (167-238)||(32254031-32254102)
chr6 (169-238)||(1249150-1249217)
chr6 (123-165)||(9952993-9953035)
chr6 (165-238)||(13888520-13888594)
chr6 (165-238)||(2142291-2142364)
chr6 (189-238)||(29698167-29698216)
chr6 (165-234)||(7545645-7545715)
chr6 (173-211)||(9954332-9954370)
chr6 (264-296)||(7215949-7215981)
chr6 (131-187)||(29229149-29229204)
[»] chr1 (26 HSPs)
chr1 (122-238)||(39426214-39426330)
chr1 (121-238)||(32887735-32887851)
chr1 (126-238)||(26860010-26860121)
chr1 (124-210)||(35534741-35534825)
chr1 (130-238)||(26372256-26372362)
chr1 (130-238)||(50294026-50294134)
chr1 (165-238)||(5047379-5047452)
chr1 (169-238)||(12151771-12151840)
chr1 (130-238)||(32618805-32618911)
chr1 (169-226)||(7840681-7840738)
chr1 (123-238)||(18976260-18976376)
chr1 (130-238)||(50484390-50484498)
chr1 (164-234)||(24977248-24977318)
chr1 (165-238)||(30077642-30077715)
chr1 (119-238)||(5854799-5854917)
chr1 (176-238)||(24413291-24413353)
chr1 (169-238)||(48327156-48327224)
chr1 (165-238)||(52280037-52280110)
chr1 (131-185)||(49384627-49384680)
chr1 (181-238)||(12380924-12380981)
chr1 (181-238)||(12384991-12385048)
chr1 (123-187)||(1228496-1228560)
chr1 (121-197)||(12380831-12380907)
chr1 (121-197)||(12384898-12384974)
chr1 (122-222)||(27982072-27982171)
chr1 (130-206)||(45978041-45978117)
[»] chr2 (29 HSPs)
chr2 (124-237)||(30709115-30709228)
chr2 (123-238)||(4446852-4446967)
chr2 (121-238)||(19908784-19908899)
chr2 (123-198)||(30217517-30217592)
chr2 (122-238)||(31618724-31618838)
chr2 (130-238)||(13238685-13238793)
chr2 (130-238)||(35316829-35316937)
chr2 (147-238)||(15709772-15709862)
chr2 (173-238)||(28564896-28564961)
chr2 (126-238)||(30857638-30857749)
chr2 (122-192)||(30721564-30721632)
chr2 (147-238)||(36929720-36929810)
chr2 (123-236)||(2063359-2063472)
chr2 (165-238)||(8988859-8988932)
chr2 (164-237)||(34512022-34512095)
chr2 (165-238)||(35315286-35315359)
chr2 (165-238)||(38397085-38397158)
chr2 (166-238)||(21454494-21454565)
chr2 (165-238)||(374997-375070)
chr2 (169-238)||(23259489-23259558)
chr2 (264-306)||(6946245-6946287)
chr2 (147-237)||(15722239-15722328)
chr2 (130-196)||(22061433-22061498)
chr2 (165-234)||(19905889-19905958)
chr2 (165-238)||(23459844-23459917)
chr2 (123-223)||(35315521-35315620)
chr2 (172-238)||(4603114-4603180)
chr2 (124-173)||(6946335-6946384)
chr2 (130-238)||(36758825-36758932)
[»] chr8 (24 HSPs)
chr8 (124-238)||(42761717-42761831)
chr8 (121-238)||(21360280-21360400)
chr8 (169-238)||(30426671-30426740)
chr8 (130-238)||(28069723-28069831)
chr8 (130-238)||(36991360-36991468)
chr8 (147-238)||(18689495-18689585)
chr8 (147-238)||(24557162-24557252)
chr8 (165-238)||(26749546-26749619)
chr8 (128-238)||(42338008-42338117)
chr8 (130-238)||(6014198-6014307)
chr8 (167-238)||(36748492-36748562)
chr8 (174-238)||(10672519-10672583)
chr8 (165-221)||(17520403-17520459)
chr8 (121-238)||(10652571-10652688)
chr8 (169-234)||(40695249-40695314)
chr8 (166-238)||(34612568-34612640)
chr8 (123-238)||(45113274-45113390)
chr8 (120-211)||(37966397-37966487)
chr8 (119-185)||(20169125-20169190)
chr8 (173-238)||(24102020-24102085)
chr8 (189-238)||(28318924-28318973)
chr8 (169-238)||(41511266-41511335)
chr8 (189-238)||(44859189-44859238)
chr8 (165-237)||(3763520-3763592)
[»] chr5 (28 HSPs)
chr5 (130-238)||(29340999-29341106)
chr5 (130-238)||(35660572-35660680)
chr5 (131-238)||(4895699-4895806)
chr5 (130-238)||(11775797-11775905)
chr5 (130-238)||(18625384-18625492)
chr5 (130-238)||(32129580-32129688)
chr5 (130-238)||(37266735-37266843)
chr5 (130-237)||(43309113-43309220)
chr5 (169-238)||(14349807-14349876)
chr5 (165-238)||(31653039-31653112)
chr5 (169-238)||(40753164-40753233)
chr5 (130-238)||(13032122-13032230)
chr5 (147-238)||(34827196-34827287)
chr5 (132-238)||(39902419-39902525)
chr5 (165-238)||(10362012-10362085)
chr5 (165-238)||(36290606-36290679)
chr5 (166-238)||(2984389-2984461)
chr5 (128-194)||(9460597-9460662)
chr5 (165-235)||(27428879-27428949)
chr5 (165-238)||(3057152-3057225)
chr5 (173-234)||(14688582-14688643)
chr5 (165-218)||(18653385-18653438)
chr5 (166-238)||(31279918-31279990)
chr5 (175-238)||(43222130-43222193)
chr5 (184-238)||(4592804-4592858)
chr5 (123-157)||(21213953-21213987)
chr5 (165-238)||(31546490-31546563)
chr5 (165-238)||(41660110-41660183)
[»] chr7 (34 HSPs)
chr7 (130-238)||(4888471-4888579)
chr7 (123-212)||(47270580-47270668)
chr7 (169-238)||(25084730-25084799)
chr7 (125-238)||(40023215-40023327)
chr7 (130-238)||(9559017-9559125)
chr7 (123-238)||(39855770-39855884)
chr7 (169-238)||(12139330-12139400)
chr7 (165-238)||(32915960-32916033)
chr7 (122-238)||(33450510-33450627)
chr7 (165-238)||(47799898-47799971)
chr7 (130-238)||(7712331-7712438)
chr7 (161-217)||(29844316-29844372)
chr7 (131-238)||(989133-989239)
chr7 (123-237)||(7373872-7373985)
chr7 (134-238)||(7362572-7362676)
chr7 (130-238)||(16366522-16366630)
chr7 (130-238)||(21151156-21151264)
chr7 (121-238)||(47500236-47500354)
chr7 (165-238)||(8149613-8149686)
chr7 (169-238)||(45260429-45260498)
chr7 (131-238)||(29631052-29631156)
chr7 (130-222)||(44647984-44648076)
chr7 (167-238)||(24193597-24193668)
chr7 (121-238)||(18198260-18198377)
chr7 (165-238)||(30588539-30588612)
chr7 (130-198)||(5463867-5463934)
chr7 (164-234)||(19027680-19027751)
chr7 (164-234)||(20726885-20726956)
chr7 (135-238)||(38365659-38365761)
chr7 (167-226)||(46802331-46802390)
chr7 (119-185)||(44390835-44390900)
chr7 (152-209)||(18064588-18064643)
chr7 (130-238)||(47226039-47226145)
chr7 (264-296)||(47270512-47270544)
[»] chr4 (37 HSPs)
chr4 (130-238)||(19901881-19901989)
chr4 (130-235)||(23610649-23610754)
chr4 (130-238)||(5416429-5416536)
chr4 (125-226)||(36532641-36532741)
chr4 (121-238)||(56558283-56558400)
chr4 (126-238)||(1871281-1871392)
chr4 (123-238)||(56453777-56453891)
chr4 (122-193)||(15178628-15178699)
chr4 (164-238)||(5763159-5763233)
chr4 (165-238)||(56269074-56269147)
chr4 (130-238)||(3952133-3952241)
chr4 (130-238)||(34778425-34778533)
chr4 (131-217)||(5815267-5815350)
chr4 (127-238)||(42844148-42844258)
chr4 (165-238)||(23474115-23474188)
chr4 (169-238)||(24073620-24073689)
chr4 (165-238)||(48914516-48914589)
chr4 (130-238)||(18207003-18207111)
chr4 (165-238)||(5524451-5524524)
chr4 (128-238)||(13493276-13493387)
chr4 (173-238)||(30567905-30567970)
chr4 (128-193)||(33841766-33841830)
chr4 (165-238)||(36688186-36688259)
chr4 (125-225)||(47922324-47922425)
chr4 (165-238)||(50483554-50483627)
chr4 (130-238)||(33247093-33247201)
chr4 (130-238)||(39862521-39862629)
chr4 (172-238)||(33262557-33262623)
chr4 (165-238)||(1015852-1015925)
chr4 (130-238)||(12312438-12312547)
chr4 (202-238)||(46804635-46804671)
chr4 (200-238)||(12241441-12241479)
chr4 (172-238)||(38079725-38079791)
chr4 (164-201)||(5817976-5818013)
chr4 (136-221)||(36003216-36003300)
chr4 (165-238)||(37002249-37002322)
chr4 (165-238)||(42010121-42010194)
[»] scaffold0062 (2 HSPs)
scaffold0062 (147-238)||(58684-58774)
scaffold0062 (147-237)||(70796-70885)
[»] scaffold0250 (1 HSPs)
scaffold0250 (169-238)||(7151-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (165-238)||(29567-29640)
[»] scaffold0012 (1 HSPs)
scaffold0012 (130-238)||(208067-208175)
[»] scaffold0035 (1 HSPs)
scaffold0035 (169-238)||(16399-16468)
[»] scaffold0008 (1 HSPs)
scaffold0008 (169-238)||(9203-9272)
[»] scaffold0171 (1 HSPs)
scaffold0171 (172-238)||(17311-17377)
[»] scaffold0126 (1 HSPs)
scaffold0126 (175-238)||(22450-22513)


Alignment Details
Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34897806 - 34897940
Alignment:
Q  1 ataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgttggaatccaagtcaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34897806 ataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgtcggaatccaagtcaac 34897905  T
Q  101 atgtaatagaggtgggtgagaggggttaggatcct 135  Q
    ||||||| |||||||||||||||||||||||||||    
T  34897906 atgtaattgaggtgggtgagaggggttaggatcct 34897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 34898023 - 34898118
Alignment:
Q  287 aaaatggagaagatcttgactcgagtgggaggtattgagtgaatgaatgaacatatcttgattggtagtaacatgtcccttatatagacgtaagat 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34898023 aaaatggagaagatcttgactcgagtgggaggtattgagtgaatgaatgaacatatcttgattggtagtaacatgtcccttatatagacgtaagat 34898118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 1995573 - 1995448
Alignment:
Q  113 tgggtgagaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 212  Q
    ||||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||     
T  1995573 tgggtgacatgggttaggatcctcttcattttatcaaataaatggaagtacacaatttgaagagagatagacatagaaaatagataatgagtcctaccaa 1995474  T
Q  213 taagtgggtcccactatcattaatta 238  Q
    |||||| ||| ||| |||||||||||    
T  1995473 taagtgagtctcaccatcattaatta 1995448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 52859346 - 52859272
Alignment:
Q  124 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 198  Q
    ||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  52859346 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttagagagagatagacacataaaatagata 52859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 19830394 - 19830502
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||| |||| ||||||||| |||||||||  ||||||||||||||||||||||||||| ||    
T  19830394 gatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtcccaccat 19830493  T
Q  230 cattaatta 238  Q
    |||||||||    
T  19830494 cattaatta 19830502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 27033763 - 27033655
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||||| ||||||| |||||| ||    
T  27033763 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcccaccat 27033664  T
Q  230 cattaatta 238  Q
    |||||||||    
T  27033663 cattaatta 27033655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 43719910 - 43720018
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||| | ||||||||||||  |   ||| ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||| ||    
T  43719910 gatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccat 43720009  T
Q  230 cattaatta 238  Q
    |||||||||    
T  43720010 cattaatta 43720018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 10474400 - 10474509
Alignment:
Q  128 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 227  Q
    ||||||||||  |||||| | |||||||||| |||  |||||| |||||| |||||||||||||||||||||||| |||||| |||||||| || ||||     
T  10474400 aggatcctctctatttgacataataaatgga-gtatgcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccacc 10474498  T
Q  228 atcattaatta 238  Q
    | |||||||||    
T  10474499 aacattaatta 10474509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 2230056 - 2229987
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| | |||| |||||||||||    
T  2230056 ttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaatta 2229987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 29586447 - 29586340
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    ||||||||||||||   | |||||||||| |||  || ||||||||||||||||||||||||||||||| |  ||| ||| |||||||||||| ||| ||    
T  29586447 gatcctcttcatttagcataataaatgga-gtatgcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcaccat 29586349  T
Q  230 cattaatta 238  Q
    |||||||||    
T  29586348 cattaatta 29586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 44638052 - 44637950
Alignment:
Q  131 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 230  Q
    |||||| |||||||| |||||||||||| |||  |||||| |||||||||| |||||||||||||||| |||  ||||| ||||||| ||||| ||| ||    
T  44638052 atcctcatcatttgacaaaataaatgga-gtatgcaattttgagagagataaacacataaaatagatagtggaccctactattaagtaggtcctactgtc 44637954  T
Q  231 atta 234  Q
    ||||    
T  44637953 atta 44637950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 54911732 - 54911658
Alignment:
Q  164 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||| ||||||||||| ||||||||||| || |||||||||||||||| || || |||| |||||||||||    
T  54911732 acaatttgaagagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaatta 54911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 33632899 - 33632827
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | |||| |||||||||||    
T  33632899 caatttggagagagatagacacataaaatagatagtggatcctactattaaatggattccac-atcattaatta 33632827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 34373904 - 34373835
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||| | |||||||| |||||||||||    
T  34373904 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaatta 34373835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 24754769 - 24754673
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 226  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24754769 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 24763766 - 24763670
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 226  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24763766 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 48084939 - 48084823
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 221  Q
    |||||| |||||||| |||||| |||||||||| ||  |   |||||||| |||||||||||||| || |||||||  ||||||| |||| |||||||||    
T  48084939 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T
Q  222 cccactatcattaatta 238  Q
    ||||  |||||||||||    
T  48084839 cccatcatcattaatta 48084823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 34373593 - 34373656
Alignment:
Q  175 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  34373593 agagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 34373656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 31523666 - 31523739
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||    
T  31523666 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaatta 31523739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 51982549 - 51982656
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| |||||   |||||||||||||| |  ||||||||||||||||||| ||||||||||| || ||||| ||| ||||||||| || | |  ||    
T  51982549 gatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagatacataaaatagttagtgggttctatcattaagtgagttctatcat 51982647  T
Q  230 cattaatta 238  Q
    |||||||||    
T  51982648 cattaatta 51982656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 30235416 - 30235484
Alignment:
Q  128 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 197  Q
    |||||| |||||||||| |||||||||||| ||||  ||||||| ||||||||||||| | |||||||||    
T  30235416 aggatcatcttcatttgttaaaataaatgg-agtatgcaatttgaagagagatagacataaaaaatagat 30235484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 40851886 - 40851781
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    ||||||||  |||||| ||||||||||||  |   ||| ||||||| ||||||||||| |||||||||  ||||| | |||| ||||||||||| || ||    
T  40851886 gatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcctaccat 40851787  T
Q  230 cattaa 235  Q
    ||||||    
T  40851786 cattaa 40851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 42613157 - 42613084
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||| ||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  42613157 caatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaatta 42613084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 46167466 - 46167397
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| ||||||| ||| || || ||||||||    
T  46167466 ttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatcctaccattattaatta 46167397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 49679268 - 49679341
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  49679268 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 49679341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 25285843 - 25285907
Alignment:
Q  173 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 237  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| || | ||||| ||||| ||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaatt 25285907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 47750274 - 47750361
Alignment:
Q  135 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 223  Q
    ||||||||||| |||||||||| | ||| |||||||| ||||| ||| ||||| ||||||||||| | ||| || ||||||||| ||||    
T  47750274 tcttcatttgacaaaataaatg-aggtatacaatttgaagagacataaacacaaaaaatagataaagagtcttatcattaagtgagtcc 47750361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 550814 - 550875
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 226  Q
    ||||||||||| ||||| | ||| |||||||||  ||| ||||| |||||||||||||||||    
T  550814 caatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccac 550875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 7215807 - 7215923
Alignment:
Q  122 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 221  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7215807 ggggttagtatcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 7215906  T
Q  222 cccactatcattaatta 238  Q
    |||||||||||||||||    
T  7215907 cccactatcattaatta 7215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 2800566 - 2800682
Alignment:
Q  122 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 221  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  2800566 ggggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggt 2800665  T
Q  222 cccactatcattaatta 238  Q
    ||||| |||||| ||||    
T  2800666 cccaccatcattgatta 2800682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 4804569 - 4804452
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 220  Q
    |||||| | |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  4804569 aggggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggg 4804470  T
Q  221 tcccactatcattaatta 238  Q
    |||||| |||||||||||    
T  4804469 tcccaccatcattaatta 4804452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 7162196 - 7162088
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||| | |||||||||||||| ||    
T  7162196 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccat 7162097  T
Q  230 cattaatta 238  Q
    |||||||||    
T  7162096 cattaatta 7162088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 21159332 - 21159440
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| |||||| ||||||||||| |  |   ||| ||||||||| ||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  21159332 gatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 21159431  T
Q  230 cattaatta 238  Q
    |||||||||    
T  21159432 cattaatta 21159440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 27826608 - 27826542
Alignment:
Q  172 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  27826608 gagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 27826542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 17828532 - 17828639
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| |||||| || ||||| |||| |||  |||||||||||||||||||||||||||||||||| ||| | |||| ||||||||| |||||  ||    
T  17828532 gatcctctacatttggtataataattgga-gtatgcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatcccatcat 17828630  T
Q  230 cattaatta 238  Q
    || ||||||    
T  17828631 caataatta 17828639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 17944274 - 17944166
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||||||||||  ||||||||||||  |    || ||||||||||||||||||| |||||||||  | |||||||||| ||| |||||||||| ||    
T  17944274 gatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccat 17944175  T
Q  230 cattaatta 238  Q
    |||||||||    
T  17944174 cattaatta 17944166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 12412710 - 12412641
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||||||||  ||||||||  |||||||||||| ||||||||| |||| |||||||||||    
T  12412710 ttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcattaatta 12412641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 13089751 - 13089820
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| || ||||||  |||||||||||| |||||||| ||||| |||||||||||    
T  13089751 ttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcattaatta 13089820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 23936365 - 23936269
Alignment:
Q  132 tcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtcccac 226  Q
    |||||| ||||||||||| | |||| |||||||||||| |||||||||  ||||||||||| || ||||  || | |||||||||||||||||||||    
T  23936365 tcctctccatttgataaattgaatgaaagtacacaattcggagagagagatagacacataagatggatagcggattctaccattaagtgggtcccac 23936269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 24484956 - 24484883
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  24484956 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaatta 24484883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 227526 - 227635
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 228  Q
    |||||||| |||||| |||||||||||||  |   || |||||||||||||||||||| || |||||||  |||||||||||| ||||||| |||||  |    
T  227526 gatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatcccatca 227625  T
Q  229 tcattaatta 238  Q
    ||||| ||||    
T  227626 tcattgatta 227635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 32254031 - 32254102
Alignment:
Q  167 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||| |||||||||| | |||| || |  ||||||||| ||||||||| |||||||||||||||||||    
T  32254031 atttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaatta 32254102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 1249150 - 1249217
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||| ||||| |  ||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  1249150 ttggagagagacagacaaa--aaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 1249217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 9952993 - 9953035
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacac 165  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  9952993 gggttaagatcctctccatttgataaaataaatggaagtacac 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 13888520 - 13888594
Alignment:
Q  165 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||| ||||| || |||||||  ||| |||||||||||| |||||||||  |||||||||||    
T  13888520 caatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccatcatcattaatta 13888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 2142291 - 2142364
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |  ||||||| | ||||| |||||| |||| |||||||||||    
T  2142291 caatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaatta 2142364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 29698216 - 29698167
Alignment:
Q  189 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  29698216 aaaatagatggtggatcctaccattaagtgggtcccaccatcattaatta 29698167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 7545715 - 7545645
Alignment:
Q  165 caatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 234  Q
    |||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| ||||||||||||||    
T  7545715 caatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 9954332 - 9954370
Alignment:
Q  173 agagagatagacacataaaatagataatgggtcctacca 211  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  9954332 agagagatagacacataaaatagatagtgggtcccacca 9954370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 7215949 - 7215981
Alignment:
Q  264 gagtctatatctctccaaatgaaaaaatggaga 296  Q
    ||||||||||||||||||||||| |||||||||    
T  7215949 gagtctatatctctccaaatgaagaaatggaga 7215981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  131 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 187  Q
    ||||||| |||||| || |||||||||| |||  |||||||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 39426330 - 39426214
Alignment:
Q  122 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 221  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  39426330 ggggttagtatcatctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 39426231  T
Q  222 cccactatcattaatta 238  Q
    |||||||||||||||||    
T  39426230 cccactatcattaatta 39426214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 32887735 - 32887851
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 220  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||| ||| |||||||||||| ||||    
T  32887735 agggattaggatcctcttcatttgataaaataaatgga-gtacacagtttagagaaagatagacacataaaataaatagtggatcctaccattaaatggg 32887833  T
Q  221 tcccactatcattaatta 238  Q
    |||||| |||||||||||    
T  32887834 tcccaccatcattaatta 32887851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 126 - 238
Target Start/End: Original strand, 26860010 - 26860121
Alignment:
Q  126 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 225  Q
    |||||||| |||  ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| | ||||||| || ||||||| |||||    
T  26860010 ttaggatcatctctatttgataaaataaatgga-gtacataatttgaagagagatagacacataaaatagatagtaggtcctatcactaagtggatccca 26860108  T
Q  226 ctatcattaatta 238  Q
    | |||||||||||    
T  26860109 caatcattaatta 26860121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 35534741 - 35534825
Alignment:
Q  124 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacc 210  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||    
T  35534741 ggttagtatcctctccatttgataaaataaatggaagtacacaattt--agagagatagacacataaaatagatagtggatcctacc 35534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 26372362 - 26372256
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    ||||||||  ||||||||||||||||||||||| | |||||  |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| |     
T  26372362 gatcctctcaatttgataaaataaatggaagtagataattt--agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccac 26372265  T
Q  230 cattaatta 238  Q
    |||||||||    
T  26372264 cattaatta 26372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 50294026 - 50294134
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||| ||| || ||    
T  50294026 gatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccat 50294125  T
Q  230 cattaatta 238  Q
    |||||||||    
T  50294126 cattaatta 50294134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 5047379 - 5047452
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||||| ||  ||||||||||||||||| |||||||| || ||||||||||| |||||||||||    
T  5047379 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaatta 5047452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 12151840 - 12151771
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  12151840 ttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaatta 12151771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 32618911 - 32618805
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||||||||||  | |||||||||| |||  |||||||||||||||| |||| ||||| |||||| ||| |||||| ||||||| |||||||| ||    
T  32618911 gatcctcttcatttggcataataaatgga-gtatccaatttggagagagatggacatataaa-tagatagtggatcctactattaagtaggtcccaccat 32618814  T
Q  230 cattaatta 238  Q
    |||||||||    
T  32618813 cattaatta 32618805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 7840681 - 7840738
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 226  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7840681 ttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggtcccac 7840738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 18976260 - 18976376
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 221  Q
    |||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||| ||| |||||||||| |||    
T  18976260 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggt 18976359  T
Q  222 cccactatcattaatta 238  Q
    ||||  |||||||||||    
T  18976360 cccatcatcattaatta 18976376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 50484498 - 50484390
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||| | |||| ||||||||||||||  |    
T  50484498 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccaccgt 50484399  T
Q  230 cattaatta 238  Q
    |||||||||    
T  50484398 cattaatta 50484390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 24977318 - 24977248
Alignment:
Q  164 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 234  Q
    ||||||| |||||||||||||||| |||||||||  ||| |||||||| ||||||||| |||| |||||||    
T  24977318 acaatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcatta 24977248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 30077642 - 30077715
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |  ||||| ||| || |||||| |||||||||||||||||||    
T  30077642 caatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaatta 30077715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 5854799 - 5854917
Alignment:
Q  119 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 218  Q
    |||||||||| |||||||| ||||||| | |||||||||| ||| |||||||| | ||||||||||| | ||| | || | ||| ||||||||| || ||    
T  5854799 agaggggttatgatcctctacatttgaaagaataaatgga-gtatacaatttgaaaagagatagacataaaaatttgagagtggatcctaccataaaatg 5854897  T
Q  219 ggtcccactatcattaatta 238  Q
    | |||||  |||||||||||    
T  5854898 gatcccatcatcattaatta 5854917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 24413291 - 24413353
Alignment:
Q  176 gagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||| ||||| |||  ||||||||| |||||| |||||||||| |||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaatta 24413353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 48327156 - 48327224
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||| | |||||||||  || ||||||||| ||||||||| |||| |||||||||||    
T  48327156 ttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggt-ccaccatcattaatta 48327224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 52280037 - 52280110
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| |||||| |||||||||||    
T  52280037 caatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaatta 52280110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 49384627 - 49384680
Alignment:
Q  131 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 185  Q
    ||||||| |||||| |||||||||||||| || ||||||| ||||||||||||||    
T  49384627 atcctctccatttgttaaaataaatggaa-tatacaatttagagagagatagaca 49384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 12380924 - 12380981
Alignment:
Q  181 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaatta 12380981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 12384991 - 12385048
Alignment:
Q  181 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaatta 12385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 1228496 - 1228560
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 187  Q
    |||||| ||||||||||||||  |||||||||||||  |   ||||||||||||||| |||||||    
T  1228496 gggttaagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacaca 1228560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 12380831 - 12380907
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 197  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12380831 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 12384898 - 12384974
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 197  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12384898 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 27982171 - 27982072
Alignment:
Q  122 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 221  Q
    ||||||| |||||||| |||||   |||||||||||||| |  ||||||||||||| ||||||| | |||||| ||  ||||||| | |||||| |||||    
T  27982171 ggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagatatagacataaaaaatatatgttgggtcccatcattaaatgggt 27982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 45978117 - 45978041
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcc 206  Q
    ||||||||  |||||||||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||    
T  45978117 gatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtcc 45978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 30709228 - 30709115
Alignment:
Q  124 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 223  Q
    |||||||||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  30709228 ggttaggatcctctccatcttataaaatcaatgaaagtacacaatttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcc 30709129  T
Q  224 cactatcattaatt 237  Q
    ||| ||||||||||    
T  30709128 caccatcattaatt 30709115  T

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Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 4446852 - 4446967
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 222  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||| |||||||| ||| |||||     
T  4446852 gggttagtatcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtt 4446951  T
Q  223 ccactatcattaatta 238  Q
     |||||||||||||||    
T  4446952 tcactatcattaatta 4446967  T

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Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 19908899 - 19908784
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 220  Q
    |||||| | |||||||||||||||||| |||||||||| |||  |||||||||| ||||||||||||||||||||||| || |||||||  |||||||||    
T  19908899 aggggtaaagatcctcttcatttgatataataaatgga-gtatgcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtggg 19908802  T
Q  221 tcccactatcattaatta 238  Q
    |||||| |||||||||||    
T  19908801 tcccaccatcattaatta 19908784  T

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Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 30217592 - 30217517
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 198  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  30217592 gggttaggatcctctctatttgataaaataaatggaagcacacaatttagagtgagatagacacataaaatagata 30217517  T

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Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 31618724 - 31618838
Alignment:
Q  122 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 221  Q
    |||||||||||||||| |||||||||||  ||||||| ||| |||||||||||| ||||||| | |||||||||||| || ||| || ||||||||| ||    
T  31618724 ggggttaggatcctctccatttgataaag-aaatgga-gtatacaatttggagaaagatagatatataaaatagatagtgagtcatatcattaagtgagt 31618821  T
Q  222 cccactatcattaatta 238  Q
    ||||| |||||||||||    
T  31618822 cccacaatcattaatta 31618838  T

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Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 13238793 - 13238685
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||||||  ||||||||||||| ||    
T  13238793 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccat 13238694  T
Q  230 cattaatta 238  Q
    |||||||||    
T  13238693 cattaatta 13238685  T

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Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 35316937 - 35316829
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  35316937 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 35316838  T
Q  230 cattaatta 238  Q
    |||||||||    
T  35316837 cattaatta 35316829  T

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Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 15709862 - 15709772
Alignment:
Q  147 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  15709862 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 15709772  T

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Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 28564961 - 28564896
Alignment:
Q  173 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  28564961 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 28564896  T

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Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 238
Target Start/End: Original strand, 30857638 - 30857749
Alignment:
Q  126 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 225  Q
    |||||||||||| ||||| | |||||||||||| |||   |||||| |||||| |||||||| |||||||||||||| |||||| ||||| ||| || ||    
T  30857638 ttaggatcctctccatttcacaaaataaatgga-gtatgtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcaca 30857736  T
Q  226 ctatcattaatta 238  Q
    | |||||||||||    
T  30857737 ccatcattaatta 30857749  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 30721564 - 30721632
Alignment:
Q  122 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa 192  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  30721564 ggggttaagatccgctccatttgataaaataaatagaagtacacaatttg--gagagatagacacataaaa 30721632  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 36929810 - 36929720
Alignment:
Q  147 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||| || || ||||||||||||| ||| | || | |||||||||||    
T  36929810 aaaataaatgga-gtatgcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcattaatta 36929720  T

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Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 2063472 - 2063359
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat-aatgggtcctaccattaagtgggt 221  Q
    |||||| |||||||||||||||| ||||||||| || ||   ||||||||||||||||||||||| |||||||||   | ||||||||||  ||||||||    
T  2063472 gggttaagatcctcttcatttgacaaaataaataga-gtttgcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggt 2063374  T
Q  222 cccactatcattaat 236  Q
     |||| |||||||||    
T  2063373 tccaccatcattaat 2063359  T

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Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 8988932 - 8988859
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  | || ||||||| || |||||||||||||| |||||||||||    
T  8988932 caatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaatta 8988859  T

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Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 34512022 - 34512095
Alignment:
Q  164 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 237  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||| ||||||| |||| ||| ||||||||||    
T  34512022 acaatttggagaaagatagacacataaaatagatagtgggttatactattaagtaggtctcacaatcattaatt 34512095  T

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Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 35315286 - 35315359
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| ||||| || ||||||| || ||||||||    
T  35315286 caatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattattaatta 35315359  T

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Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 38397158 - 38397085
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||| ||||||||||||| |||||||||||| ||||| |||| |||||||| ||||||| |||| ||||||    
T  38397158 caatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccaccatcaataatta 38397085  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 21454494 - 21454565
Alignment:
Q  166 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||| |||||||||||||||| |||||||||  |||||| ||||||||||||||| |||| |||||||||||    
T  21454494 aatttagagagagatagacaca-aaaatagattgtgggtcataccattaagtgggttccaccatcattaatta 21454565  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 375070 - 374997
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||    
T  375070 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaatta 374997  T

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Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 23259489 - 23259558
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| ||||||| |  |||||||||| | ||||||| |||||| |||||||||||    
T  23259489 ttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcccaccatcattaatta 23259558  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 6946287 - 6946245
Alignment:
Q  264 gagtctatatctctccaaatgaaaaaatggagaagatcttgac 306  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  6946287 gagtctatatctctccaaattaaaaaatgaagaagatcttgac 6946245  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 15722328 - 15722239
Alignment:
Q  147 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 237  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||    
T  15722328 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaatt 15722239  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 196  Q
    ||||||||  |||||| |||||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  22061433 gatcctctcaatttgacaaaataaatg-aagtatgcaatttgaagagagatagacacataaaataga 22061498  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 19905958 - 19905889
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 234  Q
    |||||| ||||||||||||||||||||||||||  |||| | ||  |||||||| ||||||| |||||||    
T  19905958 caattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 23459844 - 23459917
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  23459844 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 23459917  T

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Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 35315620 - 35315521
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 222  Q
    |||||| |||||||| |||||   |||||||||||||| |  ||||||||||||||||| ||||| | ||||| |  ||||||||| ||||||||| |||    
T  35315620 gggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagataaacacaaacaataggtggtgggtcctatcattaagtgagtc 35315522  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 4603114 - 4603180
Alignment:
Q  172 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||| | | |||| |||||| || |||||||||  |||||||||| |||||||||||    
T  4603114 gagagagatagacatagacaatatataatgagttctaccattagatgggtcccaccatcattaatta 4603180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 6946384 - 6946335
Alignment:
Q  124 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttgga 173  Q
    |||||||||||||  |||||||||||||||||| || | |||||||||||    
T  6946384 ggttaggatcctccccatttgataaaataaatgaaaatgcacaatttgga 6946335  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 36758825 - 36758932
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| |||||   |||||||||||||||   ||||||||||||||||||||||| ||| ||  |  ||| ||||| | ||| |||||| |||| ||    
T  36758825 gatcctctccatttataaaaataaatggaagttg-caatttggagagagatagacacaaaaagtaagtggtggatcctatctttaggtgggttccacaat 36758923  T
Q  230 cattaatta 238  Q
    |||||||||    
T  36758924 cattaatta 36758932  T

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Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 42761831 - 42761717
Alignment:
Q  124 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 223  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||| |    
T  42761831 ggttaggatcctcttcacttaataaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttc 42761732  T
Q  224 cactatcattaatta 238  Q
    ||  |||||||||||    
T  42761731 catcatcattaatta 42761717  T

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Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 21360400 - 21360280
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaag----tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaag 216  Q
    ||||||||||||||||| ||||||||||||||||| ||||    |||| |||||||||||||||| |||||||| ||||||||| | || ||||||||||    
T  21360400 aggggttaggatcctctccatttgataaaataaat-gaagtacatacataatttggagagagataaacacataatatagataatagatcataccattaag 21360302  T
Q  217 tgggtcccactatcattaatta 238  Q
    |||  ||||| || ||||||||    
T  21360301 tggaccccaccattattaatta 21360280  T

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Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 30426671 - 30426740
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  30426671 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 30426740  T

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Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 28069831 - 28069723
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  28069831 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 28069732  T
Q  230 cattaatta 238  Q
    |||||||||    
T  28069731 cattaatta 28069723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 36991468 - 36991360
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| |  |||||||| ||||||||||||| |||||||||||||| ||    
T  36991468 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcccaccat 36991369  T
Q  230 cattaatta 238  Q
    |||||||||    
T  36991368 cattaatta 36991360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 18689585 - 18689495
Alignment:
Q  147 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  18689585 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 24557162 - 24557252
Alignment:
Q  147 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||| |  ||||||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||||  |||||||||||    
T  24557162 aaaataaatggaag-atgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaatta 24557252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 26749546 - 26749619
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||    
T  26749546 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaatta 26749619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 42338008 - 42338117
Alignment:
Q  128 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 227  Q
    ||||||||||||||||||||||||||||  ||||| | |||||||||||| ||| |||  ||||||||||| ||| |  ||| |||||||| ||||| |     
T  42338008 aggatcctcttcatttgataaaataaat-taagtatataatttggagagatatatacatgtaaaatagatagtggattgtactattaagtgtgtccctcc 42338106  T
Q  228 atcattaatta 238  Q
    |||||||||||    
T  42338107 atcattaatta 42338117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 6014307 - 6014198
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 228  Q
    |||||||| |||||| |||||||||| ||  |   ||||||||||| ||||||||||| || ||||||| || |||||||||||||||||| ||| | ||    
T  6014307 gatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctatta 6014208  T
Q  229 tcattaatta 238  Q
    ||||||||||    
T  6014207 tcattaatta 6014198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 36748492 - 36748562
Alignment:
Q  167 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||| ||||||||||| |||||||| |  ||||||||||||||||||| |||||| |||||||||||    
T  36748492 atttggagatagatagacaca-aaaatagacagcgggtcctaccattaagtggatcccaccatcattaatta 36748562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 10672519 - 10672583
Alignment:
Q  174 gagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||| |||||||||  ||| |||||||| |||||| ||||||| |||||||||||    
T  10672519 gagagatagacacaaaaaatagatggtggatcctaccactaagtgagtcccaccatcattaatta 10672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 17520459 - 17520403
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 221  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||| |||||||||||    
T  17520459 caatttggagagatatagacacataaaatagatagcgagtcctactattaagtgggt 17520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 10652571 - 10652688
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 220  Q
    |||||| | |||||||| |||||| ||||||||||||   |   ||| ||||||||||||||| ||| ||||| |||  |||||| ||| | ||| ||||    
T  10652571 aggggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattggg 10652670  T
Q  221 tcccactatcattaatta 238  Q
    |||||| |||||||||||    
T  10652671 tcccaccatcattaatta 10652688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 40695249 - 40695314
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 234  Q
    ||||||||||||||||||| |||||||||  | |||||||||| |||||| || |||| |||||||    
T  40695249 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatcatta 40695314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 34612640 - 34612568
Alignment:
Q  166 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||| |||||||||||||||| ||||||  |  ||||||||| || |||||||||| ||| |||||||||||    
T  34612640 aatttagagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaatta 34612568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 45113390 - 45113274
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 221  Q
    |||||| |||||||| |||||| |||||||||| |   |   ||||||||||||| ||||||||| || |||||||  ||||||| |||| |||||| ||    
T  45113390 gggttaagatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgt 45113291  T
Q  222 cccactatcattaatta 238  Q
    ||||  |||||||||||    
T  45113290 cccatcatcattaatta 45113274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 37966397 - 37966487
Alignment:
Q  120 gaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacca 211  Q
    ||||||||| |||||||| ||||||  ||||||||||||| |   ||||||| ||||||||| ||||| |||||||||  | ||||||||||    
T  37966397 gaggggttaagatcctctccatttggcaaaataaatggaa-tttgcaatttgaagagagataaacacaaaaaatagattgtaggtcctacca 37966487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 20169190 - 20169125
Alignment:
Q  119 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 185  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  20169190 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 20169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 24102085 - 24102020
Alignment:
Q  173 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||| | |||||||||  ||| |||||||| |||||| || |||| |||||||||||    
T  24102085 agagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaatta 24102020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 28318924 - 28318973
Alignment:
Q  189 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||| ||||| |||||||||||| ||||||||||| || |||||||||||    
T  28318924 aaaaaagatagtgggtcctaccactaagtgggtccaaccatcattaatta 28318973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 41511335 - 41511266
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||| ||||||||| | | |||||||||| ||||||||| || ||||||| | |||| |||||||||||    
T  41511335 ttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaatta 41511266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 44859189 - 44859238
Alignment:
Q  189 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||  ||||| |||||| |||||||||||||| |||||||||||    
T  44859189 aaaatagatggtgggttctaccactaagtgggtcccaccatcattaatta 44859238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 3763520 - 3763592
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 237  Q
    |||||||||||| | |||||| | |||| || |  |||||||||||||||||||||| ||||  |||||||||    
T  3763520 caatttggagagtggtagacaaaaaaaaaaggtggtgggtcctaccattaagtgggttccaccgtcattaatt 3763592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 29341106 - 29340999
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| |||||| || |||||||||| |||  ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||    
T  29341106 gatcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccat 29341008  T
Q  230 cattaatta 238  Q
    |||||||||    
T  29341007 cattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 35660572 - 35660680
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  35660572 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 35660671  T
Q  230 cattaatta 238  Q
    |||||||||    
T  35660672 cattaatta 35660680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 4895699 - 4895806
Alignment:
Q  131 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 230  Q
    |||||||| |||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  231 attaatta 238  Q
    ||||||||    
T  4895799 attaatta 4895806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 11775905 - 11775797
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||||||  |    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccgt 11775806  T
Q  230 cattaatta 238  Q
    |||||||||    
T  11775805 cattaatta 11775797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 18625384 - 18625492
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  18625384 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 18625483  T
Q  230 cattaatta 238  Q
    |||||||||    
T  18625484 cattaatta 18625492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 32129580 - 32129688
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |  | || ||||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||    
T  32129580 gatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccat 32129679  T
Q  230 cattaatta 238  Q
    |||||||||    
T  32129680 cattaatta 32129688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 37266843 - 37266735
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  37266843 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 37266744  T
Q  230 cattaatta 238  Q
    |||||||||    
T  37266743 cattaatta 37266735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 43309220 - 43309113
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    ||||||||| |||||||||||||||||||  |   ||| ||||||||||||||||| | |||||||||| ||| || ||||||||| ||||| |||| ||    
T  43309220 gatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccat 43309121  T
Q  230 cattaatt 237  Q
    ||||||||    
T  43309120 cattaatt 43309113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 14349876 - 14349807
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  14349876 ttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 14349807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 31653112 - 31653039
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||| |||||||| ||| ||| |||||||||||    
T  31653112 caatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagtctcacaatcattaatta 31653039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 40753164 - 40753233
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||| |||||||||||||| |||||||||||    
T  40753164 ttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaatta 40753233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 13032230 - 13032122
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  || ||||||||| ||| |||||||||| ||    
T  13032230 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccat 13032131  T
Q  230 cattaatta 238  Q
    |||||||||    
T  13032130 cattaatta 13032122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 34827287 - 34827196
Alignment:
Q  147 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||  ||  ||| ||||||||||||||||| | |||||||||  ||| |||||||| |||||||||||||| ||| |||||||    
T  34827287 aaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaatta 34827196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 39902525 - 39902419
Alignment:
Q  132 tcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatca 231  Q
    |||||| ||||||| ||||||||||||  |  |||| ||||||||||||| |||||  ||||||||  |||||||||||| ||| ||| | |||| ||||    
T  39902525 tcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattccaccatca 39902426  T
Q  232 ttaatta 238  Q
    |||||||    
T  39902425 ttaatta 39902419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 10362012 - 10362085
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||| ||||||||||||| ||||||||| | || ||| ||||||||||||||||||| |||  ||||||||||    
T  10362012 caattaggagagagatagagacataaaattggtagtggatcctaccattaagtgggtctcaccgtcattaatta 10362085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 36290679 - 36290606
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || ||||||| |||||| |||||||||||    
T  36290679 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaatta 36290606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 2984389 - 2984461
Alignment:
Q  166 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||||||||||||||||||  | |||  ||||| || ||| |||||||||| |||||||||||    
T  2984389 aatttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaatta 2984461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 9460597 - 9460662
Alignment:
Q  128 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 194  Q
    |||||||||| |||||| |||||||||| || |||  ||||||||||||||||||||||||| ||||    
T  9460597 aggatcctctccatttggtaaaataaataga-gtatgcaatttggagagagatagacacatataata 9460662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 27428879 - 27428949
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaa 235  Q
    ||||||||| ||||||||||||| |||||||||  ||  ||||||||||||||| || |||| ||||||||    
T  27428879 caatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 3057152 - 3057225
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||| ||||||| ||||| |||||||||  ||| ||||||||||||||| ||| ||  |||||||||||    
T  3057152 caatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaatta 3057225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 14688643 - 14688582
Alignment:
Q  173 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 234  Q
    |||||||| ||||||||||||||||| ||| | |||||||||||||| | |||| |||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcatta 14688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 18653438 - 18653385
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 218  Q
    ||||||| ||||||||||||||| |||||||||| || || |||||||||||||    
T  18653438 caatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtg 18653385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 31279990 - 31279918
Alignment:
Q  166 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||| | ||||||||||||||| ||  ||||||||| ||||| |||||||| || || ||||||||    
T  31279990 aatttggagagtgctagacacataaaataaattgtgggtcctatcattatgtgggtcctaccataattaatta 31279918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 43222193 - 43222130
Alignment:
Q  175 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||| |||||||||  |||||| || |||||| ||| |||||| |||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaatta 43222130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 4592858 - 4592804
Alignment:
Q  184 cacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||| |||||||||  |||||| ||||| |||||||||||||| |||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaatta 4592804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 21213987 - 21213953
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatgg 157  Q
    ||||||||||||||| |||||||||||||||||||    
T  21213987 gggttaggatcctctccatttgataaaataaatgg 21213953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 31546563 - 31546490
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||| |||||| |||||| |||||||||||  |||| ||||| ||||||||| |||||  || ||||||||    
T  31546563 caatttgaagagaggtagacatataaaatagatggtgggccctactattaagtggatcccatcataattaatta 31546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 41660183 - 41660110
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |  ||||||  | || || ||||||||||| |||||||||||    
T  41660183 caatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaatta 41660110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 4888579 - 4888471
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| ||    
T  4888579 gatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccat 4888480  T
Q  230 cattaatta 238  Q
    |||||||||    
T  4888479 cattaatta 4888471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 47270668 - 47270580
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 212  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| || ||||||||    
T  47270668 gggttaggatcctctctatttgataaaataaatggaattacacaatttagagatagatagacacat-aaatagataataggccctaccat 47270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 25084730 - 25084799
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  25084730 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 25084799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 40023215 - 40023327
Alignment:
Q  125 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 224  Q
    ||||| |||||||  |||||| ||||||||  || ||| |||||||||||| ||||||||| ||||||||| |||||| || ||||||||||||||||||    
T  40023215 gttagaatcctctctatttgaaaaaataaaacga-gtatacaatttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtccc 40023313  T
Q  225 actatcattaatta 238  Q
    || | |||||||||    
T  40023314 accaccattaatta 40023327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 9559017 - 9559125
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| ||    
T  9559017 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 9559116  T
Q  230 cattaatta 238  Q
    |||||||||    
T  9559117 cattaatta 9559125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 39855770 - 39855884
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 222  Q
    |||||| ||| |||||||||||| ||| |||||||| ||    ||||||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  39855770 gggttaagattctcttcatttgacaaattaaatgga-gtttgtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtc 39855868  T
Q  223 ccactatcattaatta 238  Q
    |||  |||||||||||    
T  39855869 ccatcatcattaatta 39855884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 12139400 - 12139330
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagt-gggtcccactatcattaatta 238  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||    
T  12139400 ttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtcccaccatcattaatta 12139330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 32916033 - 32915960
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||| |||||    
T  32916033 caatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaatta 32915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 33450627 - 33450510
Alignment:
Q  122 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtggg 220  Q
    ||||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||||||| |||| ||||||||    
T  33450627 ggggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtggg 33450528  T
Q  221 tcccactatcattaatta 238  Q
    |||||  |||||||||||    
T  33450527 tcccatcatcattaatta 33450510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 47799898 - 47799971
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||    
T  47799898 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaatta 47799971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 7712331 - 7712438
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| |||||   |||||||||||||| |  |||||| |||||||||||| |||||| ||||||| || ||||||||||||||||||| |||| ||    
T  7712331 gatcctctccatttataaaaataaatggaag-atgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccaccat 7712429  T
Q  230 cattaatta 238  Q
    | |||||||    
T  7712430 ctttaatta 7712438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 29844372 - 29844316
Alignment:
Q  161 tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 217  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  29844372 tacacaatttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 989239 - 989133
Alignment:
Q  131 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 230  Q
    ||||||| ||||||| ||| |||||||| ||   ||||||||||||||||||||||| |||||| ||| |||||||||||| ||||| ||||| || ||     
T  989239 atcctctccatttgacaaattaaatgga-gtttgcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccata 989141  T
Q  231 attaatta 238  Q
    ||||||||    
T  989140 attaatta 989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 7373985 - 7373872
Alignment:
Q  123 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 222  Q
    |||||| |||||||||| || | |||||||||||| | ||  ||||||||||||||||||  ||| |||||||| | |||||| ||| ||||||| | ||    
T  7373985 gggttaagatcctcttcgttggttaaaataaatggga-tatgcaatttggagagagataggtacaaaaaatagacagtgggtcttactattaagtagatc 7373887  T
Q  223 ccactatcattaatt 237  Q
    |||||||||||||||    
T  7373886 ccactatcattaatt 7373872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 7362676 - 7362572
Alignment:
Q  134 ctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatt 233  Q
    |||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| ||| ||||| |||| ||||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcatt 7362577  T
Q  234 aatta 238  Q
    |||||    
T  7362576 aatta 7362572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 16366630 - 16366522
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||| |  ||||||||  ||| |||||||| |||||| ||||||| ||    
T  16366630 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcccaccat 16366531  T
Q  230 cattaatta 238  Q
    |||||||||    
T  16366530 cattaatta 16366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 21151264 - 21151156
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||   || |||||||| |||||||||||||| ||    
T  21151264 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcccaccat 21151165  T
Q  230 cattaatta 238  Q
    |||||||||    
T  21151164 cattaatta 21151156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 47500236 - 47500354
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgg 219  Q
    |||||||| |||||||| |||||  |||||||||| ||  |    |||||||||||||||||||||| || |||||||  ||||||| |||| |||||||    
T  47500236 aggggttaagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgg 47500335  T
Q  220 gtcccactatcattaatta 238  Q
    ||||||  |||||||||||    
T  47500336 gtcccatcatcattaatta 47500354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 8149686 - 8149613
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||| ||||||||||| || |||||||  || |||||| || ||||||||||||||||| |||||||||||    
T  8149686 caatttgaagagagatagagacgtaaaataagtagtgggtcatatcattaagtgggtcccaccatcattaatta 8149613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 45260429 - 45260498
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| |||||||||  ||| |||||||| ||||||| |||||  |||||||||||    
T  45260429 ttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcattaatta 45260498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 29631156 - 29631052
Alignment:
Q  131 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 230  Q
    ||||||| |||||| |||||||||||| |||   |||||||   ||||||||||||| || ||||||| ||||||| |||| || || ||||||||||||    
T  29631156 atcctctccatttggtaaaataaatgg-agtttgcaatttg--aagagatagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatc 29631060  T
Q  231 attaatta 238  Q
    ||||||||    
T  29631059 attaatta 29631052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 44648076 - 44647984
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 222  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| ||| |||| ||||||||||    
T  44648076 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtc 44647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 24193668 - 24193597
Alignment:
Q  167 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||||||||| ||| |||||  |||| ||||||    
T  24193668 atttgaagagagatagacacataaaatagacaatgagtcttaccattaaatggatcccatcatcagtaatta 24193597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 18198377 - 18198260
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 220  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||| | ||||||||| |||||||||  ||||| || ||| |||||| |    
T  18198377 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgag 18198278  T
Q  221 tcccactatcattaatta 238  Q
    |||||| |||||||||||    
T  18198277 tcccaccatcattaatta 18198260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 30588612 - 30588539
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||  ||||||||||||| ||||||  | | |||||||| || |||||||||||||| |||||||||||    
T  30588612 caatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaatta 30588539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 5463867 - 5463934
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 198  Q
    |||||||| ||||||||| |||||||  | ||| |||||||||||||| ||| ||||||||||||||||    
T  5463867 gatcctctccatttgatataataaatata-gtatacaatttggagagatataaacacataaaatagata 5463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 19027680 - 19027751
Alignment:
Q  164 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 234  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  19027680 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 20726956 - 20726885
Alignment:
Q  164 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 234  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  20726956 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 38365761 - 38365659
Alignment:
Q  135 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 234  Q
    |||||||||  ||||||||||| || |||  |||||| || |||||||| ||| ||||| ||||||||||| ||| ||||| ||| | | ||||||||||    
T  38365761 tcttcattttttaaaataaatgtaa-tacgtaatttgaagtgagatagatacaaaaaattgataatgggtcttactattaaatggattctactatcatta 38365663  T
Q  235 atta 238  Q
    ||||    
T  38365662 atta 38365659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 46802331 - 46802390
Alignment:
Q  167 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 226  Q
    |||| |||||||||||||| | ||||||||   |||||||||||| ||||||||||||||    
T  46802331 atttagagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccac 46802390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 44390900 - 44390835
Alignment:
Q  119 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 185  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  44390900 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 44390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 18064643 - 18064588
Alignment:
Q  152 aaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctac 209  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| | || |||||||    
T  18064643 aaatggaa-tacacaatt-ggagagagatagacacataaaatagacagtgagtcctac 18064588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 47226039 - 47226145
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| ||||||  |  ||||||| |||| ||| |||||||||| ||    
T  47226039 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaata--tggtgggtcccaccactaaatgggtcccaccat 47226136  T
Q  230 cattaatta 238  Q
    |||||||||    
T  47226137 cattaatta 47226145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 47270544 - 47270512
Alignment:
Q  264 gagtctatatctctccaaatgaaaaaatggaga 296  Q
    ||||||||||||||||||||||| |||||||||    
T  47270544 gagtctatatctctccaaatgaagaaatggaga 47270512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 19901881 - 19901989
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  19901881 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 19901980  T
Q  230 cattaatta 238  Q
    |||||||||    
T  19901981 cattaatta 19901989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 23610754 - 23610649
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||||||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  23610754 gatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 23610655  T
Q  230 cattaa 235  Q
    ||||||    
T  23610654 cattaa 23610649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 5416429 - 5416536
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  5416429 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacaca-aaaatagattgtgggtcctaccactaagtgggtcccaccat 5416527  T
Q  230 cattaatta 238  Q
    |||||||||    
T  5416528 cattaatta 5416536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 36532741 - 36532641
Alignment:
Q  125 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 224  Q
    |||| |||||||| ||| |||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||| ||||| |||| ||||||| ||    
T  36532741 gttaagatcctctccatctgataaaataaatgga-gttcacaatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttcc 36532643  T
Q  225 ac 226  Q
    ||    
T  36532642 ac 36532641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 56558400 - 56558283
Alignment:
Q  121 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 220  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||| || ||||||||    
T  56558400 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtggg 56558301  T
Q  221 tcccactatcattaatta 238  Q
    |||||| |||||||||||    
T  56558300 tcccaccatcattaatta 56558283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 1871392 - 1871281
Alignment:
Q  126 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 225  Q
    ||||||||||||  |||||| |||||||||||| |||  ||||||||||||||||||||| | || ||||||| ||| |||||| | |||||||||||||    
T  1871392 ttaggatcctctcaatttgacaaaataaatgga-gtatgcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtccca 1871294  T
Q  226 ctatcattaatta 238  Q
      |||||||||||    
T  1871293 tcatcattaatta 1871281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 56453777 - 56453891
Alignment:
Q  123 gggttaggatcctcttcatttgata-aaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 221  Q
    |||||| |||||||| ||||| ||| ||||||||||||| |  ||||||||||||||||||||||| ||||||| |  ||||||||| ||||||||||||    
T  56453777 gggttaagatcctctccattt-atagaaataaatggaag-atgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggt 56453874  T
Q  222 cccactatcattaatta 238  Q
    ||||| |||||| ||||    
T  56453875 cccaccatcattcatta 56453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 15178628 - 15178699
Alignment:
Q  122 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 193  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||    
T  15178628 ggggttaggattctctccatttgataaaatgaatggaagtacataatttgaagagagataaacacataaaat 15178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 5763159 - 5763233
Alignment:
Q  164 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  5763159 acaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 5763233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 56269074 - 56269147
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||||| |||||||||||||| |||||||||||    
T  56269074 caatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaatta 56269147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 3952133 - 3952241
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||||||||  |||||||||||| |||||||||| ||| ||    
T  3952133 gatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtctcaccat 3952232  T
Q  230 cattaatta 238  Q
    |||||||||    
T  3952233 cattaatta 3952241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 34778533 - 34778425
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||| ||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  34778533 gatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 34778434  T
Q  230 cattaatta 238  Q
    |||||||||    
T  34778433 cattaatta 34778425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 5815267 - 5815350
Alignment:
Q  131 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 217  Q
    ||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||  |||||| |||||||||| ||||| |||||    
T  5815267 atcctctccatttgataaaataaatgg-agtacaaaattttgagagagatagacac--aaaatatataatgggtcataccactaagt 5815350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 42844148 - 42844258
Alignment:
Q  127 taggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 226  Q
    ||||||||||| ||| | ||||||||||| ||  || |||||||||||| |||||||||||||||||||| | || ||||||| ||||| ||| |||| |    
T  42844148 taggatcctctccatattataaaataaatagagtta-acaatttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctc 42844246  T
Q  227 tatcattaatta 238  Q
     |||||||||||    
T  42844247 catcattaatta 42844258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 23474188 - 23474115
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||| ||||  |||||| |||||||||||    
T  23474188 caatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccaccatcattaatta 23474115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 24073689 - 24073620
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||||||||  ||||||||  |||||||||||| |||||||||||| | |||||||||||    
T  24073689 ttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcccgccatcattaatta 24073620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 48914516 - 48914589
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||| ||||||||| ||||||||||||||||  ||||||||| ||| |||||||| || |||||||||||||    
T  48914516 caatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgctatcattaatta 48914589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 18207003 - 18207111
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||| |||||||||| |  |   ||| || |||||||||||||| | |||||||||  |||||||||||| |||||||||||||  ||    
T  18207003 gatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 18207102  T
Q  230 cattaatta 238  Q
    |||||||||    
T  18207103 cattaatta 18207111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 5524524 - 5524451
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  5524524 caatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaatta 5524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 13493387 - 13493276
Alignment:
Q  128 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtccca 225  Q
    ||||||||||  |||||| |||||||||||| |||  |||||| ||||||||  ||||||| ||||||||||| ||| ||| |||| |||||| |||||     
T  13493387 aggatcctctctatttgacaaaataaatgga-gtatgcaatttagagagagagatagacacgtaaaatagatagtggatcccaccactaagtgagtccct 13493289  T
Q  226 ctatcattaatta 238  Q
     ||||||||||||    
T  13493288 ttatcattaatta 13493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 30567970 - 30567905
Alignment:
Q  173 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||||| |||  |||||||||||    
T  30567970 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaatta 30567905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 33841766 - 33841830
Alignment:
Q  128 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 193  Q
    |||||||||| |||||| |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  33841766 aggatcctctccatttgttaaagtaaatgga-gtatacaatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 36688186 - 36688259
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||||||| ||||||  |  || |||||| || |||||||||||||| |||||||||||    
T  36688186 caatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaatta 36688259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 47922324 - 47922425
Alignment:
Q  125 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcc 223  Q
    |||| |||||||| |||||| |||||||||| ||  |   ||||||||||||| ||||||||| || |||||||  |||||||||||| |||||||||||    
T  47922324 gttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcc 47922423  T
Q  224 ca 225  Q
    ||    
T  47922424 ca 47922425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 50483554 - 50483627
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||| |||||||||| ||||||||||| | | ||| ||||||||||| ||| || ||||||||||||    
T  50483554 caatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattatcattaatta 50483627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 33247093 - 33247201
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  ||||| |||||| ||| ||||| |||| ||    
T  33247093 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccat 33247192  T
Q  230 cattaatta 238  Q
    |||||||||    
T  33247193 cattaatta 33247201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 39862629 - 39862521
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||||||||||||| ||| |   ||| || |||||||||||||||| |||||||||  || |||||| || ||| || || |||| ||    
T  39862629 gatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttccaccat 39862530  T
Q  230 cattaatta 238  Q
    |||||||||    
T  39862529 cattaatta 39862521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 33262557 - 33262623
Alignment:
Q  172 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||||| |||||||||  ||| |||||||| ||| | |||||||| |||||||||||    
T  33262557 gagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcattaatta 33262623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 1015852 - 1015925
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||| |||||||||||||||| ||||||  |  ||||||| | ||||| ||||||||||| |||||||||||    
T  1015852 caatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaatta 1015925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 12312438 - 12312547
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa-tagataatgggtcctaccattaagtgggtcccacta 228  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||| |||||  ||| |||||||| |||||||||||||  |    
T  12312438 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtcccatca 12312537  T
Q  229 tcattaatta 238  Q
    ||||||||||    
T  12312538 tcattaatta 12312547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 46804671 - 46804635
Alignment:
Q  202 ggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46804671 ggtcctaccattaagtgggtccaactatcattaatta 46804635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 12241441 - 12241479
Alignment:
Q  200 tgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  12241441 tgggtcctaccactaagtgggtcccaccatcattaatta 12241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 38079725 - 38079791
Alignment:
Q  172 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||  ||||||||  |||||||||| | ||||||| | |||| |||||||||||    
T  38079725 gagagagatagacacaagaaatagatggtgggtcctactactaagtggattccaccatcattaatta 38079791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 5818013 - 5817976
Alignment:
Q  164 acaatttggagagagatagacacataaaatagataatg 201  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5818013 acaatttggagagagatagacacaaaaaagagataatg 5817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 36003216 - 36003300
Alignment:
Q  136 cttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 221  Q
    |||||||||  |||||||||| |||||  ||||||||||||||||| | ||| |||||| ||| |||||| |  ||||||||||||    
T  36003216 cttcatttgtcaaaataaatg-aagtatgcaatttggagagagataaatacaaaaaataaatattgggtcatgtcattaagtgggt 36003300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 37002249 - 37002322
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||| ||||||||||||| ||||||  |  ||| |||||  | |||||||||||||| |||||||||||    
T  37002249 caatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaatta 37002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 42010194 - 42010121
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| ||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  42010194 caatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 42010121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 58774 - 58684
Alignment:
Q  147 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  58774 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 58684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 70885 - 70796
Alignment:
Q  147 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 237  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||    
T  70885 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaatt 70796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 7220 - 7151
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||||||| |||| |||||||||||    
T  7220 ttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcattaatta 7151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 29567 - 29640
Alignment:
Q  165 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||| |||||||||||| ||||||||||| |||| ||||||| ||||| ||| |||||||||||||||||||    
T  29567 caatttagagagagatagagacataaaataggtaataggtcctagcattacgtgagtcccactatcattaatta 29640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 208175 - 208067
Alignment:
Q  130 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 229  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| |||||||||  |||||||||||| |||||||||||||  ||    
T  208175 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 208076  T
Q  230 cattaatta 238  Q
    |||||||||    
T  208075 cattaatta 208067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 16399 - 16468
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||  |||||||||||    
T  16399 ttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaatta 16468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 9203 - 9272
Alignment:
Q  169 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| ||||||| | |||| |||||||||||    
T  9203 ttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcattaatta 9272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 17311 - 17377
Alignment:
Q  172 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    |||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaatta 17377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 22450 - 22513
Alignment:
Q  175 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 238  Q
    ||||||||||||| |||||||||| ||| |||||||| |||||| || |||| || ||||||||    
T  22450 agagatagacacaaaaaatagatagtggatcctaccactaagtgagttccacaataattaatta 22513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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