View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14702_high_7 (Length: 454)
Name: NF14702_high_7
Description: NF14702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14702_high_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 15 - 454
Target Start/End: Original strand, 36521620 - 36522059
Alignment:
| Q |
15 |
atatgcctattctatctgcacaccaaacaagctttagagtttagttcaacattttaaataattttttctcagttcaataggacactttactaattgatga |
114 |
Q |
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| T |
36521620 |
atatgcctattctatctgcacaccaaacaagctttagtgtttagttcaacattttaaataattttttctcagttcaataggacactttactaattgatga |
36521719 |
T |
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| Q |
115 |
ctcgttgacacacttggatggattatgttaatatgtttttctgcaagatgcatgttaatagaatctgtcttataattatcaaatcactatcatcaaacca |
214 |
Q |
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| T |
36521720 |
ctcgttgacacacttggatggattatgttaatatgtttttctgcaagatgcatgttaatagaatctgtcttataattatcaaatcactatcatcaaacca |
36521819 |
T |
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| Q |
215 |
ccattattgaacattcaatgtatcaattagtgtatatcttgactatgctccaatgagaagaattatttgaattacaattaactttctttcatgacattat |
314 |
Q |
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| T |
36521820 |
ccattattgaacattcaatgtatcaattagtgtatatcttgactatgctccaatgagaagaattatttgaattacaattaactttctttcatgacattat |
36521919 |
T |
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| Q |
315 |
tagaatatttgnnnnnnncttcatgacacctattgagcaaatcattgacattttaataggagaaatagtactatagtatatcactttttctaacttctaa |
414 |
Q |
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| T |
36521920 |
tagaatatttgtttttttcttcatgacacctattgagcaaatcattgacattttaataggagaaatagtactatagtatatcactttttctaacttctaa |
36522019 |
T |
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| Q |
415 |
ctaaccaaatggccattgaatagtgaccacttttcttcat |
454 |
Q |
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| T |
36522020 |
ctaaccaaatggccattgaatagtgaccacttttcttcat |
36522059 |
T |
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