View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14702_low_19 (Length: 324)
Name: NF14702_low_19
Description: NF14702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14702_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 295
Target Start/End: Complemental strand, 7235284 - 7235009
Alignment:
| Q |
18 |
tatagtgcctaaagcttgttctctcctaatatannnnnnnnnnatagaatttatagagttttaaaaagtattttcttaaaattagattcgctattaaatg |
117 |
Q |
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|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7235284 |
tataatgcctaaagcttgttctctcctaatatatttttttt--atagaatttatagagttttaaaaagtattttcttaaaattagattcgctattaaatg |
7235187 |
T |
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| Q |
118 |
tcttttgagtggatcaatttgttttgttcgtgcttattaaaaaatgtgttgtgtttatccctttaactcaattaataatgaggttacataaaaacatgac |
217 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
7235186 |
tcttttgaatggatcaatttgttttgttcgtgcttattaaaaaatgtgttgtgtttatccctttaactcaattaataatgaggttgcataaaaacatgat |
7235087 |
T |
|
| Q |
218 |
aatcataagaatttattatttttaaagtaacttttaattatctttttaacctttcatgaaagaaagggggaaattttt |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7235086 |
aatcataagaatttattatttttaaagtaacttttaattatctttttaacctttcatgaaagaaagggggaaattttt |
7235009 |
T |
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