View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14702_low_26 (Length: 275)

Name: NF14702_low_26
Description: NF14702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14702_low_26
NF14702_low_26
[»] chr4 (39 HSPs)
chr4 (1-275)||(16467083-16467358)
chr4 (45-212)||(32089938-32090101)
chr4 (90-212)||(51682575-51682697)
chr4 (49-205)||(32868013-32868165)
chr4 (90-212)||(19329381-19329503)
chr4 (89-209)||(42434244-42434364)
chr4 (45-212)||(32626037-32626200)
chr4 (45-212)||(34728195-34728358)
chr4 (90-212)||(38427085-38427207)
chr4 (90-212)||(51702478-51702600)
chr4 (45-212)||(34041167-34041330)
chr4 (91-212)||(6137281-6137402)
chr4 (91-208)||(13387009-13387126)
chr4 (90-190)||(27907033-27907133)
chr4 (90-212)||(11020364-11020486)
chr4 (45-212)||(20503454-20503617)
chr4 (91-212)||(6944577-6944698)
chr4 (92-210)||(13372395-13372513)
chr4 (92-210)||(13382596-13382714)
chr4 (90-212)||(20835728-20835850)
chr4 (45-204)||(40875241-40875396)
chr4 (107-212)||(5975677-5975782)
chr4 (45-212)||(52719081-52719246)
chr4 (90-212)||(33117535-33117657)
chr4 (95-180)||(40479900-40479985)
chr4 (44-212)||(43837664-43837828)
chr4 (47-212)||(38962428-38962587)
chr4 (60-208)||(48860716-48860857)
chr4 (44-160)||(28589211-28589323)
chr4 (94-207)||(13387889-13388002)
chr4 (45-212)||(47960270-47960433)
chr4 (117-212)||(28755406-28755504)
chr4 (96-153)||(7645904-7645961)
chr4 (92-179)||(53773703-53773791)
chr4 (90-178)||(52344549-52344638)
chr4 (45-154)||(38792242-38792347)
chr4 (157-212)||(22254244-22254299)
chr4 (113-154)||(15725363-15725404)
chr4 (113-165)||(23383901-23383953)
[»] chr2 (33 HSPs)
chr2 (45-212)||(18924508-18924671)
chr2 (45-212)||(29471603-29471766)
chr2 (47-212)||(10664662-10664823)
chr2 (88-212)||(42090436-42090560)
chr2 (50-212)||(1749890-1750050)
chr2 (45-208)||(24314240-24314400)
chr2 (47-212)||(9548181-9548342)
chr2 (88-212)||(39089111-39089235)
chr2 (90-212)||(21950661-21950783)
chr2 (45-190)||(12895372-12895512)
chr2 (90-204)||(12725727-12725841)
chr2 (116-205)||(2969684-2969773)
chr2 (91-212)||(33740256-33740377)
chr2 (45-153)||(34450334-34450438)
chr2 (90-178)||(44539853-44539941)
chr2 (45-212)||(16719695-16719859)
chr2 (46-178)||(5534259-5534387)
chr2 (90-153)||(10862595-10862658)
chr2 (99-152)||(6231240-6231293)
chr2 (48-212)||(39961510-39961670)
chr2 (90-212)||(4206451-4206576)
chr2 (90-153)||(27097052-27097115)
chr2 (88-161)||(25880652-25880725)
chr2 (47-153)||(36779775-36779879)
chr2 (90-153)||(14747368-14747431)
chr2 (91-153)||(29511848-29511911)
chr2 (88-178)||(34125556-34125646)
chr2 (92-153)||(27175484-27175545)
chr2 (120-168)||(2969625-2969673)
chr2 (96-153)||(5601710-5601767)
chr2 (134-212)||(39434985-39435063)
chr2 (113-154)||(23387309-23387350)
chr2 (113-165)||(41528078-41528130)
[»] chr1 (38 HSPs)
chr1 (88-212)||(43939463-43939587)
chr1 (90-212)||(24992878-24993000)
chr1 (45-212)||(25825270-25825433)
chr1 (91-212)||(1406731-1406852)
chr1 (107-212)||(25671007-25671112)
chr1 (88-212)||(2964873-2964997)
chr1 (90-204)||(1627688-1627801)
chr1 (88-178)||(8549573-8549663)
chr1 (91-212)||(44720087-44720207)
chr1 (88-212)||(14463341-14463465)
chr1 (90-212)||(1838673-1838796)
chr1 (105-208)||(7336086-7336189)
chr1 (90-212)||(30414115-30414237)
chr1 (101-212)||(5226821-5226932)
chr1 (88-198)||(10769780-10769890)
chr1 (90-212)||(40461003-40461125)
chr1 (91-212)||(42470778-42470899)
chr1 (45-149)||(26284479-26284579)
chr1 (92-209)||(26213714-26213831)
chr1 (45-212)||(9005450-9005611)
chr1 (112-212)||(47921582-47921682)
chr1 (90-176)||(26897311-26897397)
chr1 (117-209)||(15661119-15661211)
chr1 (91-155)||(49660366-49660430)
chr1 (91-162)||(42470572-42470643)
chr1 (126-212)||(17452945-17453031)
chr1 (88-212)||(17168177-17168301)
chr1 (90-153)||(1469708-1469771)
chr1 (102-212)||(4105534-4105635)
chr1 (90-153)||(26842829-26842892)
chr1 (88-205)||(6813855-6813971)
chr1 (135-212)||(30819571-30819648)
chr1 (143-212)||(30289030-30289099)
chr1 (117-200)||(10835582-10835664)
chr1 (113-154)||(20201672-20201713)
chr1 (90-131)||(48875119-48875160)
chr1 (166-211)||(49659914-49659959)
chr1 (113-165)||(16005747-16005799)
[»] chr3 (48 HSPs)
chr3 (45-212)||(54160410-54160571)
chr3 (45-212)||(3283247-3283410)
chr3 (44-211)||(4125996-4126159)
chr3 (45-212)||(54253770-54253933)
chr3 (48-208)||(41355439-41355595)
chr3 (98-212)||(20513055-20513169)
chr3 (45-212)||(34673319-34673482)
chr3 (45-212)||(39328434-39328597)
chr3 (50-212)||(8674558-8674716)
chr3 (90-210)||(11238690-11238810)
chr3 (90-212)||(13700266-13700388)
chr3 (91-201)||(19228596-19228706)
chr3 (90-212)||(21395877-21395999)
chr3 (91-212)||(45408268-45408389)
chr3 (45-209)||(35280433-35280593)
chr3 (45-212)||(42092829-42092993)
chr3 (48-212)||(52945591-52945751)
chr3 (94-212)||(9665331-9665449)
chr3 (102-212)||(19855486-19855596)
chr3 (45-212)||(38101164-38101327)
chr3 (103-212)||(8351074-8351183)
chr3 (88-212)||(50090844-50090968)
chr3 (92-212)||(54411810-54411930)
chr3 (93-177)||(27038002-27038086)
chr3 (93-180)||(27026656-27026743)
chr3 (94-212)||(35180595-35180713)
chr3 (90-206)||(35711846-35711960)
chr3 (91-212)||(36418735-36418856)
chr3 (44-212)||(6125792-6125957)
chr3 (90-212)||(5232630-5232755)
chr3 (107-176)||(21481947-21482016)
chr3 (97-178)||(37702593-37702674)
chr3 (113-178)||(53518908-53518973)
chr3 (90-212)||(46354037-46354160)
chr3 (112-210)||(52089066-52089164)
chr3 (135-212)||(39867131-39867208)
chr3 (90-153)||(46969914-46969977)
chr3 (134-212)||(34673466-34673544)
chr3 (134-212)||(34673528-34673606)
chr3 (113-176)||(36227849-36227911)
chr3 (88-152)||(46770514-46770578)
chr3 (88-153)||(51614623-51614688)
chr3 (136-192)||(4043917-4043973)
chr3 (125-171)||(45408396-45408441)
chr3 (113-165)||(12127713-12127765)
chr3 (113-155)||(27418802-27418843)
chr3 (90-124)||(39866806-39866840)
chr3 (120-162)||(53518868-53518910)
[»] chr5 (30 HSPs)
chr5 (45-212)||(23204398-23204561)
chr5 (46-212)||(38293453-38293616)
chr5 (49-212)||(18015664-18015823)
chr5 (88-212)||(37172405-37172529)
chr5 (90-212)||(9741747-9741869)
chr5 (90-212)||(38758636-38758757)
chr5 (91-212)||(15978824-15978945)
chr5 (90-214)||(28813073-28813197)
chr5 (101-212)||(20269255-20269366)
chr5 (88-190)||(17689352-17689453)
chr5 (104-212)||(16994168-16994276)
chr5 (93-203)||(19325055-19325166)
chr5 (98-212)||(28038226-28038341)
chr5 (45-190)||(19995322-19995460)
chr5 (92-178)||(26730322-26730407)
chr5 (91-212)||(19323716-19323837)
chr5 (88-212)||(27365737-27365861)
chr5 (46-153)||(16490894-16490997)
chr5 (89-171)||(5497757-5497839)
chr5 (90-153)||(16490733-16490795)
chr5 (134-212)||(16273624-16273702)
chr5 (88-153)||(23129610-23129675)
chr5 (92-212)||(13960394-13960514)
chr5 (113-178)||(31042562-31042626)
chr5 (112-171)||(35425249-35425306)
chr5 (88-154)||(19863121-19863187)
chr5 (113-170)||(31056411-31056467)
chr5 (113-154)||(33696220-33696261)
chr5 (113-165)||(17232879-17232931)
chr5 (113-165)||(17421861-17421913)
[»] chr8 (45 HSPs)
chr8 (91-212)||(5224321-5224441)
chr8 (92-208)||(253965-254081)
chr8 (92-208)||(661777-661893)
chr8 (45-212)||(26912295-26912457)
chr8 (92-212)||(38498265-38498385)
chr8 (45-212)||(16930776-16930939)
chr8 (45-208)||(33568040-33568199)
chr8 (102-212)||(39077308-39077418)
chr8 (90-207)||(22812335-22812452)
chr8 (92-208)||(847575-847691)
chr8 (44-200)||(9478745-9478897)
chr8 (91-212)||(40067566-40067687)
chr8 (90-212)||(10078326-10078445)
chr8 (90-210)||(28969113-28969233)
chr8 (46-178)||(38092157-38092285)
chr8 (47-212)||(42806231-42806394)
chr8 (90-212)||(12295179-12295301)
chr8 (103-212)||(9479436-9479545)
chr8 (91-212)||(14916676-14916797)
chr8 (45-178)||(19922566-19922695)
chr8 (90-204)||(28539193-28539307)
chr8 (90-212)||(30774147-30774269)
chr8 (92-212)||(1983493-1983613)
chr8 (96-212)||(14041352-14041468)
chr8 (96-212)||(23472536-23472651)
chr8 (96-212)||(31272793-31272909)
chr8 (90-212)||(16784352-16784467)
chr8 (125-212)||(41829567-41829654)
chr8 (50-212)||(44873934-44874093)
chr8 (45-163)||(41624623-41624737)
chr8 (45-153)||(3210839-3210943)
chr8 (94-153)||(16645497-16645556)
chr8 (91-172)||(1271036-1271117)
chr8 (46-212)||(12176179-12176341)
chr8 (46-212)||(12420607-12420769)
chr8 (110-212)||(13326964-13327064)
chr8 (103-153)||(39589964-39590014)
chr8 (44-125)||(40067453-40067530)
chr8 (148-211)||(44473770-44473833)
chr8 (107-153)||(39077162-39077208)
chr8 (113-154)||(35550773-35550814)
chr8 (112-153)||(40301372-40301412)
chr8 (94-127)||(44508922-44508955)
chr8 (113-165)||(1201632-1201684)
chr8 (113-165)||(32068985-32069037)
[»] chr7 (39 HSPs)
chr7 (90-212)||(21993491-21993613)
chr7 (47-208)||(41378344-41378501)
chr7 (90-212)||(24611437-24611559)
chr7 (91-212)||(31953180-31953301)
chr7 (46-212)||(3203259-3203425)
chr7 (90-212)||(35983128-35983250)
chr7 (90-212)||(36004540-36004662)
chr7 (90-212)||(41037146-41037268)
chr7 (90-212)||(45099992-45100114)
chr7 (90-212)||(48227243-48227365)
chr7 (47-212)||(5995025-5995187)
chr7 (90-178)||(41585891-41585979)
chr7 (90-212)||(3961198-3961320)
chr7 (45-212)||(9522437-9522597)
chr7 (99-211)||(46003753-46003866)
chr7 (91-167)||(26927978-26928054)
chr7 (90-189)||(35221677-35221776)
chr7 (99-212)||(43077514-43077627)
chr7 (88-178)||(27131052-27131142)
chr7 (90-155)||(14656532-14656597)
chr7 (113-212)||(12362868-12362966)
chr7 (94-153)||(20009197-20009256)
chr7 (45-150)||(28333734-28333835)
chr7 (90-168)||(3350026-3350104)
chr7 (88-212)||(20568279-20568404)
chr7 (91-212)||(42373471-42373592)
chr7 (115-212)||(27946861-27946957)
chr7 (88-178)||(48709045-48709135)
chr7 (113-178)||(24251884-24251948)
chr7 (91-180)||(38368213-38368302)
chr7 (45-153)||(32392208-32392313)
chr7 (91-152)||(7596892-7596953)
chr7 (127-212)||(36343024-36343110)
chr7 (103-153)||(48624971-48625021)
chr7 (88-163)||(3875209-3875283)
chr7 (112-168)||(44868036-44868091)
chr7 (91-155)||(8953301-8953365)
chr7 (110-154)||(3407179-3407222)
chr7 (113-165)||(9401617-9401669)
[»] chr6 (21 HSPs)
chr6 (45-212)||(15081142-15081305)
chr6 (91-212)||(10075014-10075135)
chr6 (90-212)||(12159461-12159583)
chr6 (45-212)||(17347018-17347181)
chr6 (45-212)||(6322511-6322674)
chr6 (90-210)||(18096354-18096468)
chr6 (107-206)||(19104310-19104409)
chr6 (88-178)||(9533424-9533513)
chr6 (90-209)||(18102475-18102588)
chr6 (112-208)||(9891398-9891494)
chr6 (88-147)||(29427245-29427304)
chr6 (102-180)||(25090546-25090624)
chr6 (45-178)||(14975378-14975505)
chr6 (90-166)||(32645707-32645783)
chr6 (56-153)||(19143648-19143739)
chr6 (92-155)||(24553222-24553285)
chr6 (90-153)||(28295569-28295635)
chr6 (90-153)||(28516438-28516504)
chr6 (90-202)||(7190635-7190739)
chr6 (116-154)||(29375231-29375269)
chr6 (110-155)||(8062088-8062132)
[»] scaffold0168 (1 HSPs)
scaffold0168 (88-212)||(35075-35199)
[»] scaffold0002 (2 HSPs)
scaffold0002 (105-212)||(478331-478438)
scaffold0002 (45-177)||(94781-94909)
[»] scaffold0006 (1 HSPs)
scaffold0006 (102-212)||(231154-231264)
[»] scaffold0093 (1 HSPs)
scaffold0093 (45-212)||(9173-9335)
[»] scaffold0004 (1 HSPs)
scaffold0004 (47-212)||(121607-121768)
[»] scaffold0001 (1 HSPs)
scaffold0001 (90-212)||(392427-392549)
[»] scaffold0246 (1 HSPs)
scaffold0246 (95-180)||(17839-17924)
[»] scaffold0086 (1 HSPs)
scaffold0086 (45-153)||(8500-8604)
[»] scaffold0091 (1 HSPs)
scaffold0091 (91-178)||(3773-3859)
[»] scaffold0057 (1 HSPs)
scaffold0057 (47-154)||(75002-75105)
[»] scaffold0003 (2 HSPs)
scaffold0003 (90-179)||(103259-103348)
scaffold0003 (92-152)||(88185-88245)
[»] scaffold0009 (1 HSPs)
scaffold0009 (119-212)||(49842-49934)
[»] scaffold0112 (1 HSPs)
scaffold0112 (92-153)||(35914-35975)


Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 16467083 - 16467358
Alignment:
Q  1 cttaaacttcttcaaaccaaatataaaatgaggtattaatagaagg-ttttgctataagccatccatgaagatgttttttagtaatccatccacacctca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||  ||||||||| |||||||||||||||||    
T  16467083 cttaaacttcttcaaaccaaatataaaatgaggtattaatagaagggttttgctataagccacctatgaaggcgttttttagcaatccatccacacctca 16467182  T
Q  100 aggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||| || ||||| ||||||||    
T  16467183 aggtgtgattttcactttttagttataactttgttaaaagataccttcataaaaattagttggtgctttttaacaaatgttcatataataacttgttaaa 16467282  T
Q  200 agacaccttcatacaggtacagagccagaataatatattgagggaggcgaaacaataagaataagcaataaaaaca 275  Q
    ||||||||||||||||||||||||||| || || |||| ||||| | ||||| ||||| |||||||||||||||||    
T  16467283 agacaccttcatacaggtacagagccaaaaaaaaatatcgagggtgacgaaaaaataacaataagcaataaaaaca 16467358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 32089938 - 32090101
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||||||||||||||||||| ||||||    | | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  32089938 ggttttgctagaagccatccatgaagatgtcttttag----caacccacacctcgaggtgtgattttcactttttagttataactttgttaaaagacaca 32090033  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| |||||||||||||||||||||| |  || ||||| ||| |||||||||||||||||    
T  32090034 ttcataaaaattagttggtgtcttttaacaaatgctaataaaataacttgctaaaagacaccttcata 32090101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 51682575 - 51682697
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  51682575 ccacacctcaaggtgtgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaata 51682674  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| ||||| |||||||||||    
T  51682675 acttgctaaaaaacaccttcata 51682697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 205
Target Start/End: Complemental strand, 32868165 - 32868013
Alignment:
Q  49 ttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttca 148  Q
    |||||| ||||||||||||||| | | |||||||||||||    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  32868165 ttgctagaagccatccatgaaggtatcttttagtaatcca----cacctcaaggtgtgattttcactttttagttataactttgctaaaacacaccttca 32868070  T
Q  149 taaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacac 205  Q
    ||||||| ||||||||||||||| |||||| || |||||||| ||||||||||||||    
T  32868069 taaaaattagttggtgtcttttagcaaatgctcatagaataacttgttaaaagacac 32868013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 19329503 - 19329381
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  19329503 ccacatctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgatcatagaata 19329404  T
Q  190 atttgttaaaagacaccttcata 212  Q
    ||||||||||| |||||||||||    
T  19329403 atttgttaaaatacaccttcata 19329381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 89 - 209
Target Start/End: Original strand, 42434244 - 42434364
Alignment:
Q  89 tccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaat 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  42434244 tccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaat 42434343  T
Q  189 aatttgttaaaagacaccttc 209  Q
    || ||| ||||| ||||||||    
T  42434344 aacttgctaaaaaacaccttc 42434364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 32626037 - 32626200
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| || |||    |||||||||||||||||| ||||||||||||||||||||| ||||||||| |    
T  32626037 ggttttgctagaagccacccatgaaggtgtcttttagcaaccca----cacctcaaggtgtgatttccactttttagttataactttgctaaaagacaac 32626132  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| ||||||||||||||| |||||| || |||||||| ||| |||||||||||||||||    
T  32626133 ttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcata 32626200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 34728195 - 34728358
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| || |||    |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  34728195 ggttttgctagaagccacccatgaaggtgtcttttagcaaccca----cacctcaaggtgtgatttccactttttagttataactttgctaaaagacacc 34728290  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| ||||||||||||||| |||||| |  |||||||| ||| |||||||||||||||||    
T  34728291 ttcataaaaattagttggtgtcttttagcaaatgcttatagaataacttgctaaaagacaccttcata 34728358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 38427085 - 38427207
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  38427085 ccacaccttaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaata 38427184  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||| ||||||    
T  38427185 acttgctaaaagacactttcata 38427207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 51702600 - 51702478
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| || |||||||    
T  51702600 ccacacctcaaggtgtgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtttcttttagcaaatgctcatagaata 51702501  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||| ||||||    
T  51702500 acttgctaaaagacactttcata 51702478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 34041167 - 34041330
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||||||||||||||| ||| ||||||    | | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  34041167 ggttttgctagaagccatccatgaaggtgtcttttag----caacccacacctcaagttgtgattttcactttttagttataactttgctaaaagacacc 34041262  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||| ||||| | |||||||||||||||||||| |  |||| ||| ||| |||||||||| ||||||    
T  34041263 ttcattaaaattacttggtgtcttttaacaaatgcttatagagtaacttgctaaaagacacattcata 34041330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 6137402 - 6137281
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |  ||||||||    
T  6137402 cacacctcaatgtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatagaataa 6137303  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||| ||||||    
T  6137302 cttgctaaaagacacattcata 6137281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 13387126 - 13387009
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| ||||||||||||||| |||||| || ||||||||    
T  13387126 cacacctcaaggtgtgattttcacattttagttataactatgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataa 13387027  T
Q  191 tttgttaaaagacacctt 208  Q
     ||| |||||||||||||    
T  13387026 cttgctaaaagacacctt 13387009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 27907133 - 27907033
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  27907133 ccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaata 27907034  T
Q  190 a 190  Q
    |    
T  27907033 a 27907033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 11020364 - 11020486
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||  | ||||| ||||||||||||||||| |||||||    
T  11020364 ccacatctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaaataattggtatcttttaacaaatgttcatagaata 11020463  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| ||||| |||||||||||    
T  11020464 acttgctaaaacacaccttcata 11020486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 20503617 - 20503454
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||||||  ||||||| |||||||||| || |||    | |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  20503617 ggttttgctagaagccactcatgaaggtgttttttagcaaccca----cgcctcaaggtgtgatttccactttttagttataactttgctaaaagacacc 20503522  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    || |||||||| ||||||||||||||| |||||| || |||||||  ||| ||||| |||||||||||    
T  20503521 tttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttgctaaaaaacaccttcata 20503454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 6944577 - 6944698
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | |||||||||| |||| |||||| || ||||||||    
T  6944577 cacaccttaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaacttagttggtgtcgtttagcaaatgctcatagaataa 6944676  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||||||||||    
T  6944677 cttgctaaaagacaccttcata 6944698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 13372513 - 13372395
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    |||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| || | ||||||     
T  13372513 acacctcaaggtatgatttccacttttttgttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatggaataac 13372414  T
Q  192 ttgttaaaagacaccttca 210  Q
    ||| |||||||||||||||    
T  13372413 ttgctaaaagacaccttca 13372395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 13382714 - 13382596
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    |||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| || | ||||||     
T  13382714 acacctcaaggtatgatttccacttttttgttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatggaataac 13382615  T
Q  192 ttgttaaaagacaccttca 210  Q
    ||| |||||||||||||||    
T  13382614 ttgctaaaagacaccttca 13382596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 20835850 - 20835728
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||| ||||||| || |||||||||||||||||| |||||||||||||| ||||| | ||||||| |||||||||||||| |  |||||||    
T  20835850 ccacacctcaaggggtgatttccattttttagttataactttgctaaaagacaccttcgtaaaatttagttggtatcttttaacaaatgctaatagaata 20835751  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||||||||||    
T  20835750 acttgctaaaagacaccttcata 20835728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 204
Target Start/End: Complemental strand, 40875396 - 40875241
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    ||||||| || ||||||||||| ||| ||| ||||||    | | |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  40875396 ggttttgttagaagccatccataaaggtgtcttttag----caacccacaccttaaggtttgattttcactttttagttataactttgctaaaagacacc 40875301  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagaca 204  Q
    ||||||||||| ||||||||||||| |||||||  || |||||  | |||||||||||||    
T  40875300 ttcataaaaattagttggtgtctttgaacaaatactcatagaaatacttgttaaaagaca 40875241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 5975782 - 5975677
Alignment:
Q  107 attttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacacc 206  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| |  || ||||| ||| |||||||||||    
T  5975782 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtctttcaacaaatgctaatataataacttgctaaaagacacc 5975683  T
Q  207 ttcata 212  Q
    ||||||    
T  5975682 ttcata 5975677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 52719246 - 52719081
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacac- 143  Q
    |||| ||||| |||||||| |||||||||| |||||| ||  | |  |||| ||||| ||||||||||||||||||||||||| |||||||||||||||     
T  52719246 ggttatgctagaagccatctatgaagatgtcttttagcaa--ctt--acacttcaagatgtgattttcactttttagttataattttgttaaaagacaca 52719151  T
Q  144 -cttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
     |||| ||||||| ||||| |||||||||||||||| |  |||||||||||||||||  |||||||||||    
T  52719150 ccttcgtaaaaattagttgatgtcttttaacaaatgctaatagaataatttgttaaagaacaccttcata 52719081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 33117657 - 33117535
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||| || |||||  |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||||| || |||||||    
T  33117657 ccacaccttaaagtgtgcatttcactttttagttataactttgttaaaagacacctttataaaaattagttggtgacttttagcaaatgatcatagaata 33117558  T
Q  190 atttgttaaaagacaccttcata 212  Q
      ||| ||||| |||||||||||    
T  33117557 tcttgctaaaatacaccttcata 33117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 40479985 - 40479900
Alignment:
Q  95 cctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgtt 180  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  40479985 cctcaaggtgtgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttgatgtcttttaacaaatgtt 40479900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 212
Target Start/End: Original strand, 43837664 - 43837828
Alignment:
Q  44 aggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttc-actttttagttataactttgttaaaagaca 142  Q
    ||||||||||| |||||| |||||||| ||| |||||| ||||||    ||||||||||||||||| || |||||||||||||||||| | |||| ||||    
T  43837664 aggttttgctagaagccacccatgaaggtgtcttttagcaatcca----cacctcaaggtgtgattatccactttttagttataactt-gctaaaggaca 43837758  T
Q  143 ccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||||| ||||||||||||||| ||||||    ||| |||| ||| |||| ||||||||||||    
T  43837759 ccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaacgacaccttcata 43837828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 212
Target Start/End: Complemental strand, 38962587 - 38962428
Alignment:
Q  47 ttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacctt 146  Q
    ||||||||||||||  |||||||| |||||||||  || |||    |||||||||||||||||||||||||||| ||||||||||| ||||  ||| |||    
T  38962587 ttttgctataagcctcccatgaaggtgttttttaacaaccca----cacctcaaggtgtgattttcactttttatttataactttgctaaa--acatctt 38962494  T
Q  147 cataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
     |||||||| |||||||||||||||||||||| |  || | | | ||| |||||||||||||||||    
T  38962493 tataaaaattagttggtgtcttttaacaaatgcttataaagtgacttgctaaaagacaccttcata 38962428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 60 - 208
Target Start/End: Original strand, 48860716 - 48860857
Alignment:
Q  60 catccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagt 159  Q
    ||||||||||| ||||||||||    | || |||| |||||||| |||||| || ||||||||||||||||||  |||||||||||||||   ||| |||    
T  48860716 catccatgaaggtgttttttag----caattcacatctcaaggtttgatttccattttttagttataactttgcgaaaagacaccttcat---aattagt 48860808  T
Q  160 tggtgtcttttaacaaatgttcgtagaataatttgttaaaagacacctt 208  Q
    ||||||||||||||||||| || |||||||| ||| |||||||||||||    
T  48860809 tggtgtcttttaacaaatgctcatagaataacttgctaaaagacacctt 48860857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 28589211 - 28589323
Alignment:
Q  44 aggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacac 143  Q
    ||||||||||| |||||| |||||||| ||| |||||  |||||||    ||||||||||||||||||||||||||||||||||||||| ||||| |||     
T  28589211 aggttttgctagaagccacccatgaaggtgtcttttaacaatccat----acctcaaggtgtgattttcactttttagttataactttgctaaaaaacat 28589306  T
Q  144 cttcataaaaatcagtt 160  Q
    |||||||||||| ||||    
T  28589307 cttcataaaaattagtt 28589323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 13388002 - 13387889
Alignment:
Q  94 acctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataattt 193  Q
    ||||||||||||||| | |||||||||||||||| |||| |||||| |||||| ||||||||  ||||||||||||||||||||||   ||| |||| ||    
T  13388002 acctcaaggtgtgatatccactttttagttataattttgctaaaaggcacctttataaaaatttgttggtgtcttttaacaaatgtcaataggataactt 13387903  T
Q  194 gttaaaagacacct 207  Q
    | ||||||||||||    
T  13387902 gctaaaagacacct 13387889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 47960270 - 47960433
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacac 143  Q
    |||||||||| ||| ||||||||||  ||| |||||| ||| ||    |||||||||||| |||| || | |||||||||||||||| | ||||||||||    
T  47960270 ggttttgctagaagtcatccatgaaagtgtcttttagcaattca----cacctcaaggtgagattatccattttttagttataactt-gctaaaagacac 47960364  T
Q  144 cttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||||| ||||||||||||||| ||||||    ||| |||| ||| |||||||||||||||||    
T  47960365 cttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacaccttcata 47960433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 28755504 - 28755406
Alignment:
Q  117 tttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat---ttgttaaaagacaccttcata 212  Q
    ||||||||||| ||| |||||||||| |||||||||||| | |||||||||||||||||||| || || ||||||   |||||||||||||||||||||    
T  28755504 tttagttataattttattaaaagacaacttcataaaaattaattggtgtcttttaacaaatgctcataaaataataacttgttaaaagacaccttcata 28755406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 7645904 - 7645961
Alignment:
Q  96 ctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  7645904 ctcaaggtgtgattttcactttttagttataactttgctaaaagataccttcataaaa 7645961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 53773703 - 53773791
Alignment:
Q  92 acacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgt 179  Q
    |||| ||||||||||||| ||| |||||||||||||||||  | |||||||||| |||||||||| |||||||||||| || |||||||    
T  53773703 acacttcaaggtgtgattatcaactttttagttataacttgctaaaaagacaccatcataaaaattagttggtgtcttctagcaaatgt 53773791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 52344638 - 52344549
Alignment:
Q  90 ccacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    ||||||||||||||| |||  || |||||||| ||||||  ||| |||||||||| |||||||| || ||||||||||||||||||||||    
T  52344638 ccacacctcaaggtgagatcatccactttttaattataaacttgctaaaagacacattcataaatattagttggtgtcttttaacaaatg 52344549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 38792242 - 38792347
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||| ||||| |||||||| || ||| |||||||||| || ||||    | |||||||||| |||| ||| ||||||||||||||||| ||||||| |||    
T  38792242 ggttatgctagaagccatcaataaaggtgttttttagcaacccat----atctcaaggtgtaatttccaccttttagttataactttgctaaaagatacc 38792337  T
Q  145 ttcataaaaa 154  Q
    || |||||||    
T  38792338 tttataaaaa 38792347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 22254299 - 22254244
Alignment:
Q  157 agttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||||||||||||||    |||||||| ||| |||||||||||||||||    
T  22254299 agttggtgtcttttaacaaatgccaatagaataacttgctaaaagacaccttcata 22254244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 15725363 - 15725404
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaa 154  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  15725363 actttttagttatatctttgttaaaacacaccttaataaaaa 15725404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 23383953 - 23383901
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgt 165  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||| |||| |||||    
T  23383953 actttttagttatatctttgctaaaacacaccttaataaaaaccagtgggtgt 23383901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 6e-49; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 18924508 - 18924671
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| || ||||    ||||||||||||||||| ||||||||||||||||||||| |||| ||||||    
T  18924508 ggttttgctagaagccacccatgaaggtgtcttttagcaacccat----acctcaaggtgtgatttccactttttagttataactttgctaaaggacacc 18924603  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  18924604 ttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaagacaccttcata 18924671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 29471603 - 29471766
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| |||||    ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  29471603 ggttttgctagaagccacccatgaaggtgtcttttagcaatcc----acacctcaaggagtgatttccactttttagttataactttgctaaaagacacc 29471698  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| |||| |||||||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  29471699 ttcataaaaattagtttgtgtcttttagcaaatgttcatagaataacttgctaaaagacaccttcata 29471766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 47 - 212
Target Start/End: Original strand, 10664662 - 10664823
Alignment:
Q  47 ttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacctt 146  Q
    ||||||||||||||| | |||||| ||| ||||||||| |||    |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  10664662 ttttgctataagccaccgatgaaggtgtcttttagtaaccca----cacctcaaggtgtgatttccactttttagttataactttgctaaaagacgcctt 10664757  T
Q  147 cataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||| ||||||||||||||| |||||| || |||||||| ||| |||||||||||||||||    
T  10664758 cataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcata 10664823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 42090560 - 42090436
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    |||||||||| ||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  42090560 atccacaccttaagatgtgattttcattttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaa 42090461  T
Q  188 taatttgttaaaagacaccttcata 212  Q
    ||||||| |||||||||| ||||||    
T  42090460 taatttgctaaaagacactttcata 42090436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 1749890 - 1750050
Alignment:
Q  50 tgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcat 149  Q
    ||||| ||||||||||||||| |||||||||| || | |  ||||||||||||||| |||| |||||||||||||||| |||| ||||||||||||||||    
T  1749890 tgctacaagccatccatgaaggtgttttttagcaaccta--cacacctcaaggtgtaatttccactttttagttataattttgctaaaagacaccttcat 1749987  T
Q  150 aaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||| |||||||||||||||||||||| |  ||||||||  || |||||||||||||||||    
T  1749988 aaaaattagttggtgtcttttaacaaatgctaatagaataacctgctaaaagacaccttcata 1750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 208
Target Start/End: Complemental strand, 24314400 - 24314240
Alignment:
Q  45 ggttttgctataagccatcc-atgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacac 143  Q
    |||||||||| ||||||||| |||||| ||| |||||| ||| ||    |||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  24314400 ggttttgctagaagccatcccatgaaggtgtcttttagcaattca----cacctcaaggtgtgatttccacattttagttataactttgctaaaagacac 24314305  T
Q  144 cttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacacctt 208  Q
    |||||||||||| |||||||||||||||||||||| || || ||||||||| |||||||||||||    
T  24314304 cttcataaaaattagttggtgtcttttaacaaatgctcataaaataatttgctaaaagacacctt 24314240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 212
Target Start/End: Original strand, 9548181 - 9548342
Alignment:
Q  47 ttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacctt 146  Q
    |||||||| |||||| |||||||| ||| |||||| || |||    ||||||||| |||||||| ||||||||||||||||||| | |||||||||||||    
T  9548181 ttttgctagaagccacccatgaaggtgtcttttagcaaccca----cacctcaagatgtgatttccactttttagttataacttcgctaaaagacacctt 9548276  T
Q  147 cataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||| ||||||||||||||| |||||| || |||||||| ||| |||||||||||||||||    
T  9548277 cataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcata 9548342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 39089111 - 39089235
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    |||||||||||||||| |||||| || |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||  |||||    
T  39089111 atccacacctcaaggtatgatttccattttttagttataactttgctaaaagacatcttcataaaaattagttggtgtcttttaacaaatgttaatagaa 39089210  T
Q  188 taatttgttaaaagacaccttcata 212  Q
    ||| |||||||||||||| ||||||    
T  39089211 taacttgttaaaagacacattcata 39089235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 21950783 - 21950661
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| || ||||||||| |||||||||||| || |||||||    
T  21950783 ccacacctcaaggtatgattttcactttttagttataactttgctaaaagacacattcataaatattagttggtgttttttaacaaatgctcatagaata 21950684  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||||||||||    
T  21950683 acttgctaaaagacaccttcata 21950661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 12895512 - 12895372
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| ||||||    ||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  12895512 ggttttgctagaagcca-ccatgaaggtgtcttttagcaatcca----cacctcaagatgtgattttcactttttagttatagcattgttaaaagacacc 12895418  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    ||||||||||| |||||||||||||||||||||| || ||||||||    
T  12895417 ttcataaaaattagttggtgtcttttaacaaatgctcatagaataa 12895372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 12725727 - 12725841
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  ||||| || |||||||    
T  12725727 ccacacctcaaagtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagtaaatgctcatagaata 12725826  T
Q  190 atttgttaaaagaca 204  Q
    | ||| |||||||||    
T  12725827 acttgctaaaagaca 12725841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 2969684 - 2969773
Alignment:
Q  116 ttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacac 205  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||   ||||||||||| |||||||||||    
T  2969684 ttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttaacaaatgtcaatagaataattttttaaaagacac 2969773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 33740377 - 33740256
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||| ||||| ||||||| |||||||| |||||||||||||| |||||||||| || |||||||| |||||||||||||||| ||||||   ||| ||||    
T  33740377 cacatctcaaagtgtgatattcactttctagttataactttgctaaaagacacatttataaaaattagttggtgtcttttaagaaatgtcaataggataa 33740278  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||||||||||    
T  33740277 cttgctaaaagacaccttcata 33740256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 34450438 - 34450334
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||||||||||||||| ||| ||||||    | | ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  34450438 ggttttgctagaagccatccatgaaggtgtcttttag----caacccacacctcaaggtgtgatttccactttttatttataactttgctaaaagacacc 34450343  T
Q  145 ttcataaaa 153  Q
    |||||||||    
T  34450342 ttcataaaa 34450334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 44539853 - 44539941
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||| |||||||||| | || |||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||    
T  44539853 ccacaccttaaggtgtgatatccattttttagttataactttgctaaaatacaccttcataaaaattagttggtatcttttaacaaatg 44539941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 16719695 - 16719859
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcacttttt-agttataactttgttaaaagacac 143  Q
    |||||||||| | |||| |||||||||||| |||||| ||| ||    || |||| | ||||||||| | ||||| ||| ||||||||  ||||||||||    
T  16719695 ggttttgctagaggccacccatgaagatgtcttttagcaattca----catctcaggctgtgatttttatttttttagtgataactttactaaaagacac 16719790  T
Q  144 cttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||||| |||| |||||||||||||||| ||| | |||||| | | |||||||||||||||||    
T  16719791 cttcataaaaattagtttgtgtcttttaacaaatattcatggaataactagctaaaagacaccttcata 16719859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 46 - 178
Target Start/End: Original strand, 5534259 - 5534387
Alignment:
Q  46 gttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacct 145  Q
    ||||| ||| ||| ||||||||||| | ||||||||||||||    |||||||||| ||||||||  |||||||| ||||||||||| ||||| | ||||    
T  5534259 gttttactagaagtcatccatgaaggtattttttagtaatcc----acacctcaagatgtgatttcaactttttaattataactttgctaaaaaatacct 5534354  T
Q  146 tcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||||| | ||||| | ||||||||||||    
T  5534355 tcataaaaattaattggtattttttaacaaatg 5534387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 10862658 - 10862595
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  10862658 ccacacctcaaggtgtgatttccactttttagttataattttgctaaaagacaccttcataaaa 10862595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 6231293 - 6231240
Alignment:
Q  99 aaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaa 152  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6231293 aaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaa 6231240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 212
Target Start/End: Original strand, 39961510 - 39961670
Alignment:
Q  48 tttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacacctt 146  Q
    ||||||| ||| ||||||||||| ||| |||||| ||||||    |||||||| || ||||| ||| |||||||||||||| |||| |||||||||||||    
T  39961510 tttgctaaaagacatccatgaaggtgtcttttagcaatcca----cacctcaaagtatgattatcaactttttagttataa-tttgataaaagacacctt 39961604  T
Q  147 cataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    | | ||||| |||| || |||||||||||||||   |   |||| |||||||||||||||||||||    
T  39961605 cgtgaaaattagtttgtatcttttaacaaatgtctatgagataacttgttaaaagacaccttcata 39961670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 4206576 - 4206451
Alignment:
Q  90 ccacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgt---tcgtag 185  Q
    |||||||| ||||||||||| || |||||||||||||||||| | |||||||||| ||||||||||| ||||||| ||| ||| |||||||   | | ||    
T  4206576 ccacaccttaaggtgtgattatccactttttagttataactt-gctaaaagacacattcataaaaattagttggtttctgttagcaaatgtcaataggag 4206478  T
Q  186 aataatttgttaaaagacaccttcata 212  Q
     |||| ||| |||||||||||||||||    
T  4206477 gataacttgctaaaagacaccttcata 4206451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 27097115 - 27097052
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||||||||||||||||| ||||||||||||||||||||  ||||  ||||||||||||||    
T  27097115 ccacacctcaaggtgtgatttccactttttagttataactttcctaaataacaccttcataaaa 27097052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 25880725 - 25880652
Alignment:
Q  88 atccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaaatcagttg 161  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  25880725 atccacacctcaaagtgtgattatcaactttttagttataactt-gttaaaaaacaccttcataaaaattagttg 25880652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 36779775 - 36779879
Alignment:
Q  47 ttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcacttttt--agttataactttgttaaaagacacc 144  Q
    |||||||| ||||||| ||||||| ||| |||||| |||| |    |||||||| ||||||||| ||||||||  ||||| ||||||| |||||||||||    
T  36779775 ttttgctagaagccatacatgaagttgtcttttagcaatcta----cacctcaatgtgtgatttccactttttttagttaaaactttgctaaaagacacc 36779870  T
Q  145 ttcataaaa 153  Q
    |||||||||    
T  36779871 ttcataaaa 36779879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 14747368 - 14747431
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||||||| ||||||||||||||| |||||| |||||| ||||  |||||||||||||||||||    
T  14747368 ccacaccttaaggtgtgattttcattttttaattataattttgccaaaagacaccttcataaaa 14747431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 29511848 - 29511911
Alignment:
Q  91 cacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||||||||||||||| || || ||||||||||||||| |||| ||||||||||||||||||||    
T  29511848 cacacctcaaggtgtgcttatccactttttagttataattttgctaaaagacaccttcataaaa 29511911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 34125556 - 34125646
Alignment:
Q  88 atccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||||||||||||||||| ||| |||||||||||||  || | |||||||||| ||||||||||| | |||||||  |||||||||||    
T  34125556 atccacacctcaaggtgtgattatcaactttttagttataggtt-gctaaaagacacattcataaaaattacttggtgtaatttaacaaatg 34125646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 27175484 - 27175545
Alignment:
Q  92 acacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||||||||||||||||| || |||||||||||||||||| | ||||||||||||||||||||    
T  27175484 acacctcaaggtgtgattatccactttttagttataactt-gctaaaagacaccttcataaaa 27175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 2969673 - 2969625
Alignment:
Q  120 agttataactttgttaaaagacaccttcataaaaatcagttggtgtctt 168  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  2969673 agttataactttgctaaaagacaccttcataaaaattagtgggtgtctt 2969625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 5601767 - 5601710
Alignment:
Q  96 ctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||    
T  5601767 ctcaaggtgtgattatcaactttttagttataa-tttgctaaaagacaccttcataaaa 5601710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 39434985 - 39435063
Alignment:
Q  134 taaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||| |||||||||||| |||| |||| |||||||||||||   ||| | || |||||||||||||| ||||||    
T  39434985 taaaagacatcttcataaaaattagttagtgtattttaacaaatgtctataggaaaacttgttaaaagacactttcata 39435063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 23387309 - 23387350
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaa 154  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  23387309 actttttagttatatctttgttaaaacacaccttaataaaaa 23387350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 41528078 - 41528130
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgt 165  Q
    ||||||||||||||  |||||||||| ||||||| |||||||| ||| |||||    
T  41528078 actttttagttatatttttgttaaaacacaccttaataaaaattagtgggtgt 41528130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 43939463 - 43939587
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| || |||||    
T  43939463 atccacacctcaaggtgtgattttcactttttagttataattttgttaaaagacaccttcataaaaattaattggtgtcttttaacaaatgctcatagaa 43939562  T
Q  188 taatttgttaaaagacaccttcata 212  Q
    ||| ||| |||||||||||||||||    
T  43939563 taacttgctaaaagacaccttcata 43939587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 24992878 - 24993000
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  || ||||    
T  24992878 ccacacctcaaggtgtgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatataata 24992977  T
Q  190 atttgttaaaagacaccttcata 212  Q
    ||||| |||||||||||||||||    
T  24992978 atttgctaaaagacaccttcata 24993000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 25825270 - 25825433
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||||||||||||||| ||| ||||||    | | ||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||    
T  25825270 ggttttgctagaagccatccatgaaggtgtcttttag----caacccacacctcaaggtgtgatttccactttttagttataactttgctgaaaggcacc 25825365  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    | ||||||||| |||| ||||||||||||||||| || || ||||| ||| |||||||||||||||||    
T  25825366 tccataaaaattagtttgtgtcttttaacaaatgctcataaaataacttgctaaaagacaccttcata 25825433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 1406852 - 1406731
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||||||||| ||||||||    
T  1406852 cacatctcaaagtgtgatttccactttttagttataactttgctaaaagacaccttcacaaaaattagtcggtgtcttttaccaaatgttcatagaataa 1406753  T
Q  191 tttgttaaaagacaccttcata 212  Q
    |||| |||||||||||||||||    
T  1406752 tttgctaaaagacaccttcata 1406731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 25671007 - 25671112
Alignment:
Q  107 attttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacacc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || |||||||| ||| |||||||||||    
T  25671007 attttcactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacacc 25671106  T
Q  207 ttcata 212  Q
    ||||||    
T  25671107 ttcata 25671112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 2964873 - 2964997
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    ||||||| |||||||||| |||| |||||||||||||||| |||| | |||||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  2964873 atccacatctcaaggtgtcatttccactttttagttataattttgcttaaagacaccttcataaaaattagttggtgtcttttagcaaatgttcatagaa 2964972  T
Q  188 taatttgttaaaagacaccttcata 212  Q
    ||| ||| || ||||||||||||||    
T  2964973 taacttgctagaagacaccttcata 2964997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 1627688 - 1627801
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | |||| |||||||||| ||||||||| |||||||    
T  1627688 ccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaagttagtt-gtgtcttttagcaaatgttcatagaata 1627786  T
Q  190 atttgttaaaagaca 204  Q
    | ||| |||||||||    
T  1627787 acttgctaaaagaca 1627801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 8549573 - 8549663
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| |||||||||||||||||    
T  8549573 atccacacctcaaggtgtgattttcactttttagttataactttgctaaaaaacaccttcataaaaattagttagtgtcttttaacaaatg 8549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 44720207 - 44720087
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| ||| || |  ||||||||    
T  44720207 cacaccttaaggtgtgattttcactttttagttataactttgttaaaagacacc-tcataaaaattagttgatgtcttttaccaattgctaatagaataa 44720109  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||||||||||    
T  44720108 cttgctaaaagacaccttcata 44720087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 14463465 - 14463341
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    ||||||| || || |||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || |||||    
T  14463465 atccacatcttaatgtgtgattttcattttttacttataactttgttaaaagacaccttcataaaaattagttagtgtcttttagcaaatgctcatagaa 14463366  T
Q  188 taatttgttaaaagacaccttcata 212  Q
    ||| ||| ||||| |||||||||||    
T  14463365 taacttgctaaaaaacaccttcata 14463341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 1838673 - 1838796
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataacttt-gttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaat 188  Q
    ||||||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||||| || ||||||    
T  1838673 ccacacctcaatgtgtgatttccactttttagttataacttttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaat 1838772  T
Q  189 aatttgttaaaagacaccttcata 212  Q
    || ||  |||||||||| ||||||    
T  1838773 aacttactaaaagacactttcata 1838796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 7336086 - 7336189
Alignment:
Q  105 tgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagaca 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||| |  |||| ||||||| |||||||||    
T  7336086 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatgcttatagagtaatttgctaaaagaca 7336185  T
Q  205 cctt 208  Q
    ||||    
T  7336186 cctt 7336189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 30414115 - 30414237
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||| |||||||||| |||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |  || ||||    
T  30414115 ccacatctcaaggtgttatttccattttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatataata 30414214  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| ||||| |||||||||||    
T  30414215 acttgctaaaaaacaccttcata 30414237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 5226932 - 5226821
Alignment:
Q  101 ggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaa 200  Q
    |||||||||| |||||||| |||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||  || || ||||| |||||||||    
T  5226932 ggtgtgatttccactttttggttatatctttgttaaaacacaccttcataaaaattagttggtgttttttaacaaatactcatataataacttgttaaaa 5226833  T
Q  201 gacaccttcata 212  Q
    ||||||||||||    
T  5226832 gacaccttcata 5226821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 10769780 - 10769890
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||| |||||| |  |||||    
T  10769780 atccacacctgaaggtgtgatttccactttttagttataacttggataaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcttatagaa 10769879  T
Q  188 taatttgttaa 198  Q
    ||| |||||||    
T  10769880 taacttgttaa 10769890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 40461125 - 40461003
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||| | ||| |||||||| ||||||||||||||||||||  ||||||| || ||||||||||| | ||||||||||||||||||||||| || ||||    
T  40461125 ccacactttaagatgtgatttccactttttagttataactttactaaaagatactttcataaaaattacttggtgtcttttaacaaatgttcatataata 40461026  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||||||||||    
T  40461025 acttgctaaaagacaccttcata 40461003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 42470899 - 42470778
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||||||||| || |  ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||||||    
T  42470899 cacacctcaatgtatacttttcactttttaattataattttgttaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataa 42470800  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||||||||  ||| |||||||    
T  42470799 cttgttaaagcacatcttcata 42470778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 26284479 - 26284579
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||||||| ||||    | | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26284479 ggttttgctagaagccacccatgaagatgtctttt----aacaatccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacacc 26284574  T
Q  145 ttcat 149  Q
    |||||    
T  26284575 ttcat 26284579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 26213714 - 26213831
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    |||||||||| ||||| | |||||||||| |||||||||||||||||||||| || ||||| || ||||| ||| |||||||||||| || ||||||||     
T  26213714 acacctcaagctgtgactctcactttttaattataactttgttaaaagacacatttataaatattagttgatgttttttaacaaatgctcatagaataac 26213813  T
Q  192 ttgttaaaagacaccttc 209  Q
    ||| ||||||||||||||    
T  26213814 ttgctaaaagacaccttc 26213831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 9005611 - 9005450
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaag--aca 142  Q
    |||||||||| || ||| ||||||| |||| |||||| |||||     ||||||||||||||||||||||||||||||||||| |||| ||||||  |||    
T  9005611 ggttttgctaaaaaccacccatgaatatgtcttttagcaatccg----cacctcaaggtgtgattttcactttttagttataattttgctaaaagacaca 9005516  T
Q  143 ccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||| |||    || ||||||||||||||||| |  |||||||| ||| |||||||||||||||||    
T  9005515 ccttcatagaaa----ttagtgtcttttaacaaatgctgatagaataacttgctaaaagacaccttcata 9005450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 47921682 - 47921582
Alignment:
Q  112 cactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcat 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | ||||| |||||||||||||||   ||| |||| ||||||||| ||||||||||    
T  47921682 cactttttagttataactttgctaaaagacaccttcataaaaattaattggtatcttttaacaaatgtcaataggataacttgttaaaaaacaccttcat 47921583  T
Q  212 a 212  Q
    |    
T  47921582 a 47921582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 26897397 - 26897311
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaa 176  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||||| ||| |||||||||||| ||||||||||||||| ||||    
T  26897397 ccacaccttaaggtgtgatttccactttttagttataactttgctaaaaaacatcttcataaaaattagttggtgtcttttagcaaa 26897311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 15661119 - 15661211
Alignment:
Q  117 tttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttc 209  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |  || ||||| ||| ||||| ||||||||    
T  15661119 tttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgcttataaaataacttgctaaaaaacaccttc 15661211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 49660430 - 49660366
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaat 155  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49660430 cacacctcaagttgtgatttccactttttagttataactttgttaaaagacaccttcataaaaat 49660366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 42470643 - 42470572
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttgg 162  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  42470643 cacacctcaaggtgtgatttccactttttagttataactttgttaaaagatacattcataaaaattagttgg 42470572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 17452945 - 17453031
Alignment:
Q  126 aactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||| ||||||||||||||| |||||| ||||||||||||||| |||||| || |||||||  ||| |||||||||||||||||    
T  17452945 aactttgctaaaagacaccttcacaaaaattagttggtgtcttttagcaaatgctcatagaatagcttgctaaaagacaccttcata 17453031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 17168301 - 17168177
Alignment:
Q  88 atccacacctcaaggtgtgattttcacttttt-agttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtaga 186  Q
    |||||||||||||  ||||||| ||| ||||| ||||||||||| | |||||||||||||||||||||| |  | |||||||||| ||||||    ||||    
T  17168301 atccacacctcaaaatgtgattatcaattttttagttataactt-gctaaaagacaccttcataaaaattaactagtgtcttttagcaaatgcatataga 17168203  T
Q  187 ataatttgttaaaagacaccttcata 212  Q
    |||| |||||||||||||||||||||    
T  17168202 ataacttgttaaaagacaccttcata 17168177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 1469708 - 1469771
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||||||    
T  1469708 ccacacctcaaggtgtgatttccactttttagttatagcttttctaaaagacaccttcataaaa 1469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 4105635 - 4105534
Alignment:
Q  102 gtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaag 201  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||         |||||| ||||||||||||||  || ||||| |||||||||     
T  4105635 gtgtgattttcactttttagttataactttgctaaaagacaccttcata---------tggtgttttttaacaaatgttgataaaataacttgttaaaaa 4105545  T
Q  202 acaccttcata 212  Q
     ||||||||||    
T  4105544 tcaccttcata 4105534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 26842892 - 26842829
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||||||| ||||||||| || |||||||||||||||||| |||||||||| |||||||||    
T  26842892 ccacacctcaatgtgtgatttccattttttagttataactttgctaaaagacactttcataaaa 26842829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 6813971 - 6813855
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    |||||| |||||| || |||||||||||||||| ||||||||||  ||||||| |||||| | ||||| ||||  |||||||||| ||||  || |||||    
T  6813971 atccacgcctcaaagtatgattttcactttttacttataactttactaaaagataccttcgt-aaaattagtttatgtcttttaaaaaatactcatagaa 6813873  T
Q  188 taatttgttaaaagacac 205  Q
    ||| || |||||||||||    
T  6813872 taacttattaaaagacac 6813855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 30819571 - 30819648
Alignment:
Q  135 aaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||    ||| |||||||| ||||| |||||||||||    
T  30819571 aaaagacaccttcataaaaattagttggtgtcttttagcaaatgcctataggataatttgctaaaaaacaccttcata 30819648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 30289030 - 30289099
Alignment:
Q  143 ccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||||  |||||||| |||||||||||| ||| || ||||| |||||||||||| ||||||||    
T  30289030 ccttcataaaaaatagttggtgccttttaacaaatattcataaaataacttgttaaaagacgccttcata 30289099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 10835664 - 10835582
Alignment:
Q  117 tttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaa 200  Q
    ||||||||||| |||| || || |||| ||||||||||| ||||||||||||||| |||||||   ||| |||||||| |||||    
T  10835664 tttagttataa-tttgctagaacacactttcataaaaattagttggtgtcttttagcaaatgtcaataggataatttgctaaaa 10835582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 20201713 - 20201672
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaa 154  Q
    |||||||||||||| ||||| ||||||||||||| |||||||    
T  20201713 actttttagttatatctttgctaaaagacaccttaataaaaa 20201672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 48875119 - 48875160
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataacttt 131  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  48875119 ccacacctcaagttgtgatttctactttttagttataacttt 48875160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 49659959 - 49659914
Alignment:
Q  166 cttttaacaaatgttcgtagaataatttgttaaaagacaccttcat 211  Q
    |||||||||||||||| |||||||| ||| ||||| ||||||||||    
T  49659959 cttttaacaaatgttcatagaataacttgctaaaaaacaccttcat 49659914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 16005747 - 16005799
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgt 165  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||| ||| |||||    
T  16005747 actttttagttatatctttgctaaaacacaccttaataaaaattagtgggtgt 16005799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 54160571 - 54160410
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| | |||||||||| |||||||||||||    ||||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  54160571 ggttttgctagaagccaccaatgaagatgtcttttagtaatcca----cacctcaaggtg--attttcacttttttgttataactttgttaaaagacacc 54160478  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| |||||||||||||||||||||| |  |||||||| ||| |||||||||||||||||    
T  54160477 ttcataaaaattagttggtgtcttttaacaaatgcttatagaataacttgctaaaagacaccttcata 54160410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 3283247 - 3283410
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||||||||||||||| ||| ||||||    | | |||||||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  3283247 ggttttgctagaagccatccatgaaggtgtcttttag----caacccacacctcaaggtgtgatttttactttttagttatagctttgctaaaagacacc 3283342  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| ||||||||||||||| |||||| || |||||||| ||| |||||||||||||||||    
T  3283343 ttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcata 3283410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 4126159 - 4125996
Alignment:
Q  44 aggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacac 143  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    |||||||||||||||||| ||||||||| ||||||||||| ||||||| ||    
T  4126159 aggttttgctagaagccatccatgaaggtgtcttttagtaatcca----cacctcaaggtgtgatttccactttttaattataactttgctaaaagatac 4126064  T
Q  144 cttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcat 211  Q
     ||||||||||| | ||| ||||||||| |||||| || |||||||| ||||||||||||||||||||    
T  4126063 attcataaaaattaattgatgtcttttagcaaatgctcatagaataacttgttaaaagacaccttcat 4125996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 54253770 - 54253933
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| || |||    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54253770 ggttttgctagaagccacccatgaaggtgtcttttagcaaccca----cacctcaaggtgtgatttccactttttagttataactttgttaaaagacacc 54253865  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| |||||||||||||||  ||||| || |||||||| ||| ||||| |||||||||||    
T  54253866 ttcataaaaattagttggtgtcttttaggaaatgctcatagaataacttgctaaaatacaccttcata 54253933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 41355595 - 41355439
Alignment:
Q  48 tttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttc 147  Q
    ||||||| |||||| |||||||| ||| |||||| || |||    || ||||||||||||||| ||||||||||||||||||||| || |||||||||||    
T  41355595 tttgctagaagccacccatgaaggtgtcttttagcaaccca----caactcaaggtgtgatttccactttttagttataactttgctataagacaccttc 41355500  T
Q  148 ataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacacctt 208  Q
    |||||||| |||||||||||||||||||||| || | |||||| |||||||||||||||||    
T  41355499 ataaaaattagttggtgtcttttaacaaatgctcattgaataacttgttaaaagacacctt 41355439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 20513055 - 20513169
Alignment:
Q  98 caaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgtta 197  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||| || |||||||| ||| ||    
T  20513055 caaggtgtgatttccactttttagttataactttgttaaaaaacaccttcataaaaattaattggtgtcttttaacaaatgctcatagaataaattgcta 20513154  T
Q  198 aaagacaccttcata 212  Q
    |||||||||||||||    
T  20513155 aaagacaccttcata 20513169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 34673319 - 34673482
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||| ||||| ||||||||||||||| ||| ||||||    | | ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  34673319 ggttatgctagaagccatccatgaaggtgtcttttag----caacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacacc 34673414  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| ||||| |||||||||||||||  |  || ||||| ||| |||||||||||||||||    
T  34673415 ttcataaaaattagttgatgtcttttaacaaatactaatataataacttgctaaaagacaccttcata 34673482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 39328597 - 39328434
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||||| |||||| ||| |||||  ||||||    |||||||||||||||||| ||||||||||||||||||||| ||||||||||     
T  39328597 ggttttgctagaagccatcaatgaaggtgtcttttaacaatcca----cacctcaaggtgtgatttccactttttagttataactttgctaaaagacact 39328502  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| |||||||||||||||| ||||||   ||| |||| ||| |||||||||||||||||    
T  39328501 ttcataaaaattagttggtgtcttttaagaaatgtcaataggataacttgctaaaagacaccttcata 39328434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 50 - 212
Target Start/End: Complemental strand, 8674716 - 8674558
Alignment:
Q  50 tgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcat 149  Q
    ||||| ||||||||||||||| ||| |||||| ||| |||    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  8674716 tgctagaagccatccatgaaggtgtcttttagcaattcat----acctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcat 8674621  T
Q  150 aaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||||||| | ||||| |||||| || || ||||| ||| |||||||||| ||||||    
T  8674620 aaaaatcagttggtctgttttagcaaatgctcataaaataacttgctaaaagacactttcata 8674558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 11238810 - 11238690
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||||||||| || |||||||    
T  11238810 ccacacctcaaggtgtgatttctactttttagttataactttgttaaaatacatcttcataaaaattagttgatgtcttttaacaaatgctcatagaata 11238711  T
Q  190 atttgttaaaagacaccttca 210  Q
    | ||| |||||||||||||||    
T  11238710 acttgctaaaagacaccttca 11238690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 13700266 - 13700388
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| ||  ||||||    
T  13700266 ccacacctcaatgtgtgatttccactttttagttataactttgttaaaagataccttcataaaaattagttggtgtcttttagcaaatgctcaaagaata 13700365  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | || |||||| |||||||||||    
T  13700366 acttattaaaaaacaccttcata 13700388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 19228706 - 19228596
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||||||    
T  19228706 cacacttcaaggtgtgattttcactttttaattataattttgttaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataa 19228607  T
Q  191 tttgttaaaag 201  Q
    |||| ||||||    
T  19228606 tttgctaaaag 19228596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 21395877 - 21395999
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||| || |||||| | |||||||||||||||||||||| || |||||||    
T  21395877 ccacgcctcaaggtgtgattttcactttttagttataactttgctaaaagacacatttataaaatttagttggtgtcttttaacaaatgctcatagaata 21395976  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| ||||| |||||||||||    
T  21395977 acttgctaaaaaacaccttcata 21395999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 45408389 - 45408268
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||||| |||||| || ||||||||    
T  45408389 cacacctcaaggtgtgatttccactttttagttataattttggtaaaagacaccttcataaaaattagtttgtgtcttttagcaaatgctcatagaataa 45408290  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||| ||||||    
T  45408289 cttgctaaaagacactttcata 45408268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 35280593 - 35280433
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| || |||    || ||||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  35280593 ggttttgctagaagccacccatgaaggtgtgttttagcaaccca----caactcaaggtgtgatttccactttttagttataactttgctaaaaaacacc 35280498  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttc 209  Q
    ||||||||||| |||| || |||||||||||||| || || ||||| ||| ||||||||||||||    
T  35280497 ttcataaaaattagtttgtatcttttaacaaatgctcatataataacttgctaaaagacaccttc 35280433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 42092993 - 42092829
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaaga-cac 143  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||    ||||||||||| |||||| || |||||||||||||||||| ||||| | |||    
T  42092993 ggttttgctagaagccatccatgaaggtgttttttagcaatcca----cacctcaaggtatgatttccattttttagttataactttgctaaaaaaacac 42092898  T
Q  144 cttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||| |||||||| | ||||||||||||||||||   || |||||||| ||| |||||||||||||||||    
T  42092897 ctttataaaaattaattggtgtcttttaacaaagactcatagaataacttgctaaaagacaccttcata 42092829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 212
Target Start/End: Complemental strand, 52945751 - 52945591
Alignment:
Q  48 tttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttc 147  Q
    ||||||| ||||||||||||||| ||| |||||| ||  ||    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  52945751 tttgctagaagccatccatgaaggtgtcttttagcaactca----cacctcaaagtgtgatttccactttttagttataactttgctaaaagacaccttc 52945656  T
Q  148 ataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||| |||||||| |||||| |||||| || | |||||| ||| |||||||||| ||||||    
T  52945655 ataaaaattagttggtgccttttaccaaatgctcattgaataacttgctaaaagacactttcata 52945591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 9665449 - 9665331
Alignment:
Q  94 acctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataattt 193  Q
    ||||||| |||||||||||||||||||||||||||||||  |||  |||||||||||||||| ||||  ||||||||||||||||||  |||||||| ||    
T  9665449 acctcaatgtgtgattttcactttttagttataactttgcaaaagaacaccttcataaaaattagttaatgtcttttaacaaatgttaatagaataactt 9665350  T
Q  194 gttaaaagacaccttcata 212  Q
    |||||||||||||||||||    
T  9665349 gttaaaagacaccttcata 9665331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 19855596 - 19855486
Alignment:
Q  102 gtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaag 201  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||| ||| ||| ||    
T  19855596 gtgtgatttccactttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcgtagaataacttgctaatag 19855497  T
Q  202 acaccttcata 212  Q
    |||||||||||    
T  19855496 acaccttcata 19855486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 38101164 - 38101327
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||||||||||  ||||||  |||||||||| || | |    |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  38101164 ggttttgctataagccactcatgaaagtgttttttagcaaccta----cacctcaaggtgtgatttccactttttagttataactttgctaaaagacacc 38101259  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    || |||||||| ||||||||||||||| |||||| || |||||||  ||  ||||| |||||||||||    
T  38101260 tttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttactaaaaaacaccttcata 38101327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 103 - 212
Target Start/End: Complemental strand, 8351183 - 8351074
Alignment:
Q  103 tgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaaga 202  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| || |||||||| ||| |||||||    
T  8351183 tgtgatttccattttttagttataactttgttaaaagacacattcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaaga 8351084  T
Q  203 caccttcata 212  Q
    ||||||||||    
T  8351083 caccttcata 8351074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 50090844 - 50090968
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    |||||||||| |||||||||||| |||||||||||||||| |||| ||||| |||| ||||||||||| ||||||||||||| | ||||||||  |||||    
T  50090844 atccacaccttaaggtgtgatttccactttttagttataattttgctaaaaaacactttcataaaaattagttggtgtctttcaccaaatgttaatagaa 50090943  T
Q  188 taatttgttaaaagacaccttcata 212  Q
    ||| ||| |||||||||||||||||    
T  50090944 taacttgctaaaagacaccttcata 50090968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 54411810 - 54411930
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||| |||||| || |||||||      
T  54411810 acacctcaaggtgtgatttccactttttagttataactttgctaaaaaacacctttataaaaattagttggtgtcttttagcaaatgatcatagaatatc 54411909  T
Q  192 ttgttaaaagacaccttcata 212  Q
    ||| ||||| |||||||||||    
T  54411910 ttgctaaaaaacaccttcata 54411930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 27038002 - 27038086
Alignment:
Q  93 cacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaat 177  Q
    |||||||||| ||||||| |||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  27038002 cacctcaaggcgtgatttccactttttagttataattttgctaaaagacaccttcataaaaatgagttggtgtcttttaacaaat 27038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 27026656 - 27026743
Alignment:
Q  93 cacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgtt 180  Q
    ||||||||||||| |||| |||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  27026656 cacctcaaggtgtaatttccactttttagttataattttgctaaaagacaccttcctaaaaattagttggtgtcttttaacaaatgtt 27026743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 35180713 - 35180595
Alignment:
Q  94 acctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataattt 193  Q
    |||||||||||||||||  |||||||| |||||||||||||||||||||  ||||||||||| | ||| ||| |||||||||||| |  || ||||| ||    
T  35180713 acctcaaggtgtgatttctactttttaattataactttgttaaaagacaatttcataaaaattaattgatgtattttaacaaatgctaataaaataactt 35180614  T
Q  194 gttaaaagacaccttcata 212  Q
     ||||||||||||||||||    
T  35180613 tttaaaagacaccttcata 35180595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 35711846 - 35711960
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||||||  |||||||| |||||||||| |||| ||||| |||||||||||||||||||| | || |||||||||||| |||||| || |||||||    
T  35711846 ccacacctcaa--tgtgatttccactttttagctatagctttgctaaaagacaccttcataaaagttagctggtgtcttttagcaaatgctcatagaata 35711943  T
Q  190 atttgttaaaagacacc 206  Q
    | ||| |||||||||||    
T  35711944 acttgctaaaagacacc 35711960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 36418856 - 36418735
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    ||||||| |||||||||| | ||||||||| ||||||||||| ||||||||||||| |||||||  | |||||||||||||||||||||   ||| ||||    
T  36418856 cacaccttaaggtgtgatatccactttttaattataactttgctaaaagacaccttgataaaaaataattggtgtcttttaacaaatgtcaataggataa 36418757  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||| ||||||    
T  36418756 cttgctaaaagacactttcata 36418735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 212
Target Start/End: Complemental strand, 6125957 - 6125792
Alignment:
Q  44 aggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttc-acttttt-agttataactttgttaaaagac 141  Q
    |||||||| || ||| ||||||||||| |||||||||| ||  | |  |||||||||||||||||| || ||||||| ||||||||||| | ||||||||    
T  6125957 aggttttgatagaagtcatccatgaaggtgttttttagcaa--ctt--acacctcaaggtgtgattatccacttttttagttataactt-gctaaaagac 6125863  T
Q  142 accttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||||||| ||||||||||||||| |||||||   ||  |||| ||| |||||||||||||||||    
T  6125862 accttcataaaaattagttggtgtcttttagcaaatgtctataagataacttgctaaaagacaccttcata 6125792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 5232630 - 5232755
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaaga---caccttcataaaaatcagttggtgtcttttaacaaatgttcgtaga 186  Q
    |||||||| |||||||||||  |||||||||||| |||||||| ||| |||   |||||| |||||||| |||||||||||||||||||||| |  ||||    
T  5232630 ccacaccttaaggtgtgattcccactttttagttgtaactttgctaacagagtacacctttataaaaattagttggtgtcttttaacaaatgcttctaga 5232729  T
Q  187 ataatttgttaaaagacaccttcata 212  Q
    |||| ||| |||| ||||||||||||    
T  5232730 ataacttgctaaatgacaccttcata 5232755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 21482016 - 21481947
Alignment:
Q  107 attttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||    
T  21482016 atttccactttttagttataactttgttaaaagacaccttcataaaaattagctggtgtcttttagcaaa 21481947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 37702593 - 37702674
Alignment:
Q  97 tcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||||||| | ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||| ||||||    
T  37702593 tcaaggtgtgatatccactttttagttataactttgctaaaaaacaccttcataaaaattagttggtgtctattagcaaatg 37702674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 53518908 - 53518973
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  53518908 actttttagttataactttgttaaaagacactttcataaaaattaattggtgtcttttaacaaatg 53518973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 46354160 - 46354037
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtg-tcttttaacaaatgttcgtagaat 188  Q
    ||||| || ||| ||| ||||| ||||||||||||||| ||| ||||||||||| ||||||||||| |||||||| | |||||||||||  |  || |||    
T  46354160 ccacatcttaagatgtaatttttactttttagttataattttattaaaagacactttcataaaaattagttggtgtttttttaacaaatacttataaaat 46354061  T
Q  189 aatttgttaaaagacaccttcata 212  Q
    || |||||||||||||| ||||||    
T  46354060 aacttgttaaaagacactttcata 46354037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 52089164 - 52089066
Alignment:
Q  112 cactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttca 210  Q
    ||||||||||||||||  ||| ||||||||||||||||||| || ||||||||| |||||| ||||||   || ||||| ||| |||||||||||||||    
T  52089164 cactttttagttataaacttgctaaaagacaccttcataaatattagttggtgttttttaataaatgtctatacaataacttgctaaaagacaccttca 52089066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 39867131 - 39867208
Alignment:
Q  135 aaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||||||||||||| ||||||| || ||||| |||||||  |||||||||||| |||| ||||||||||||    
T  39867131 aaaagacaccttcataaaaattagttggtatcatttaagaaatgtttatagaataatttgataaatgacaccttcata 39867208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 46969914 - 46969977
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||||| ||||||| |||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  46969914 ccacacatcaaggtatgatttccactttttagttataattttgctaaaagacaccttcataaaa 46969977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 34673466 - 34673544
Alignment:
Q  134 taaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||||||||||||||| ||||| |||||||||||||||  |  || ||||| ||| |||||||||||||||||    
T  34673466 taaaagacaccttcataaaaattagttgatgtcttttaacaaatactaatataataacttgctaaaagacaccttcata 34673544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 34673528 - 34673606
Alignment:
Q  134 taaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||||||||||||||| ||||| |||||||||||||||  |  || ||||| ||| |||||||||||||||||    
T  34673528 taaaagacaccttcataaaaattagttgatgtcttttaacaaatactaatataataacttgctaaaagacaccttcata 34673606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 36227911 - 36227849
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaa 176  Q
    |||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||| ||||    
T  36227911 actttttagttataactt-gctaaaagacaccttcataaaaattaattggtgtcttttagcaaa 36227849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 46770578 - 46770514
Alignment:
Q  88 atccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaa 152  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||| | |||||||||||||||||||    
T  46770578 atccacacctcaagttgtgattatcaactttttagttataactt-gctaaaagacaccttcataaa 46770514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 51614623 - 51614688
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||||||||| |||||||||  ||||||||||||||| |||  ||||||||||||| ||||||    
T  51614623 atccacacctcaatgtgtgatttggactttttagttataattttactaaaagacacctttataaaa 51614688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 4043973 - 4043917
Alignment:
Q  136 aaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatt 192  Q
    |||||| ||||||||||||| |||||||||||||||||| ||| || ||||||||||    
T  4043973 aaagacgccttcataaaaattagttggtgtcttttaacagatgctcatagaataatt 4043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 45408441 - 45408396
Alignment:
Q  125 taactttgttaaaagacaccttcataaaaatcagttggtgtctttta 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  45408441 taactttgttaaaagacac-ttcataaaaattagttggtgtctttta 45408396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 12127713 - 12127765
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgt 165  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||||||| |||||    
T  12127713 actttttagttatatctttgctaaaacacaccttaataaaaatcagtgggtgt 12127765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 27418802 - 27418843
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaat 155  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  27418802 actttttagttataactt-gctaaaagacaccttcataaaaat 27418843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 39866806 - 39866840
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagtta 124  Q
    ||||||||||||||||||||| |||||||||||||    
T  39866806 ccacacctcaaggtgtgatttccactttttagtta 39866840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 53518910 - 53518868
Alignment:
Q  120 agttataactttgttaaaagacaccttcataaaaatcagttgg 162  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||    
T  53518910 agttataactttgctaagagacaccttcataaaaattagttgg 53518868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 23204561 - 23204398
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| ||  ||    |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  23204561 ggttttgctagaagccacccatgaaggtgtcttttagcaagtca----cacctcaaggtgtgatttccactttttagttataactttgctaaaagacacc 23204466  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| ||||| |||||||||||||||| || |||||||| |||||||||||||||||||||    
T  23204465 ttcataaaaattagttgatgtcttttaacaaatgctcatagaataacttgttaaaagacaccttcata 23204398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 38293453 - 38293616
Alignment:
Q  46 gttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacct 145  Q
    |||||||||||||||| |||||||||||| ||||    | | |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |    
T  38293453 gttttgctataagccagccatgaagatgtctttt----aacaatccacacctcatggtgtgatttccactttttagttataactttgttaaaagacacgt 38293548  T
Q  146 tcataaaaatcagttggtgtcttttaa-caaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||| ||||||||||||||||  ||||| || |||||||| |||||||||||||||||||||    
T  38293549 tcataaaaattagttggtgtcttttaataaaatgctcatagaataacttgttaaaagacaccttcata 38293616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 49 - 212
Target Start/End: Complemental strand, 18015823 - 18015664
Alignment:
Q  49 ttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttca 148  Q
    |||||| |||||| |||||||||||| ||||||    | | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  18015823 ttgctagaagccacccatgaagatgtcttttag----caacccacacctcaaggtgtgatttccactttttagttataactttgctaaaaaacaccttca 18015728  T
Q  149 taaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||| ||||||||||||||||||||||||| |  ||||| ||| |||||||||||||||||    
T  18015727 taaaaattagttggtgtcttttaacaaatgttcatgcaataacttgctaaaagacaccttcata 18015664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 37172405 - 37172529
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    ||||| |||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  37172405 atccataccttaaggtgtgattttcactttttagttataatttttctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcgtagaa 37172504  T
Q  188 taatttgttaaaagacaccttcata 212  Q
    ||| |||||||||||||||||||||    
T  37172505 taacttgttaaaagacaccttcata 37172529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 9741869 - 9741747
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||| |||||| || |||||||    
T  9741869 ccacatctcaaggtgtgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttggtgttttttagcaaatgctcatagaata 9741770  T
Q  190 atttgttaaaagacaccttcata 212  Q
    |||||||||||||||||||||||    
T  9741769 atttgttaaaagacaccttcata 9741747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 38758636 - 38758757
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| || |||||||    
T  38758636 ccacatctcaaggtgtgattttcactttttagttataactttgttaaaagacacctttataaaaatcagttggtgtcttttagc-aatgctcatagaata 38758734  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||||||||||    
T  38758735 acttgctaaaagacaccttcata 38758757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 15978945 - 15978824
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||| ||||||||||||||| |||||  || |||| |||    
T  15978945 cacacctcaaggtgtgatttttactttttagttataattttgttaaaagacacttttataaaaattagttggtgtcttttagcaaatactcatagattaa 15978846  T
Q  191 tttgttaaaagacaccttcata 212  Q
    |||| |||||||||||||||||    
T  15978845 tttgctaaaagacaccttcata 15978824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 28813073 - 28813197
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||| |||||||| ||||||||||||||| |||||| || |||||||    
T  28813073 ccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacgcctttataaaaattagttggtgtcttttagcaaatgatcatagaata 28813172  T
Q  190 atttgttaaaagacaccttcataca 214  Q
      ||| ||||| ||| |||||||||    
T  28813173 tcttgctaaaaaacatcttcataca 28813197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 20269366 - 20269255
Alignment:
Q  101 ggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaa 200  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| | ||| ||||||||| ||||||||| |||||||| ||| |||||    
T  20269366 ggtgtgatttccactttttagttataattttattaaaagacaccttcataaaaattaattgttgtcttttagcaaatgttcatagaataacttgctaaaa 20269267  T
Q  201 gacaccttcata 212  Q
    ||||||||||||    
T  20269266 gacaccttcata 20269255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 17689352 - 17689453
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||| |||||| || |||||    
T  17689352 atccacaccttaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattag-tggtgtcttttagcaaatgctcatagaa 17689450  T
Q  188 taa 190  Q
    |||    
T  17689451 taa 17689453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 16994168 - 16994276
Alignment:
Q  104 gtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagac 203  Q
    ||||||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||| || |||||||| ||| ||||  ||    
T  16994168 gtgatttgcactttttagttataactttgctaaaagacatcttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgctaaacaac 16994267  T
Q  204 accttcata 212  Q
    |||||||||    
T  16994268 accttcata 16994276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 19325055 - 19325166
Alignment:
Q  93 cacctcaaggtgtgattttcactttttagttataa-ctttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    |||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| ||||||| ||||||| |||||| || ||||||||     
T  19325055 cacctcaaggtgtgatttccactttttagttataaactttgctaaaagacaccttcataaaaattagttggtttcttttagcaaatgctcatagaataac 19325154  T
Q  192 ttgttaaaagac 203  Q
    ||| ||||||||    
T  19325155 ttgctaaaagac 19325166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 28038226 - 28038341
Alignment:
Q  98 caaggtgtgatttt-cactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgtt 196  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||||| ||||| |||||| || |||||||| ||| |    
T  28038226 caaggtgtgatttttcactttttagttataactttactaaaagacaccttcataaaaattagttggtgtgttttagcaaatgctcatagaataacttgct 28038325  T
Q  197 aaaagacaccttcata 212  Q
    ||||||||| ||||||    
T  28038326 aaaagacactttcata 28038341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 19995460 - 19995322
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| ||||||||  || |||||| ||||||    |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  19995460 ggttttgctagaagccacccatgaaggggtcttttagcaatcca----cacctcaaggtgtgatttccactttttagttataactttgctaaaagacacc 19995365  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||||   ||| ||||||||| |||||||||||| || ||||||||    
T  19995364 ttcat---aattagttggtgttttttaacaaatgctcatagaataa 19995322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 26730322 - 26730407
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  26730322 acacctcaaggtttgattttcactttt-agttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg 26730407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 19323716 - 19323837
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    ||||||| |||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||||||||| |   || ||||    
T  19323716 cacaccttaaggtgtgatatccactttttagttataactttgctaaaagacactttcataaaaattaattggtgtcttttaacaaatgctaaaaggataa 19323815  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||||||||||    
T  19323816 cttgctaaaagacaccttcata 19323837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 27365861 - 27365737
Alignment:
Q  88 atccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtaga 186  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||||| ||||||   || ||||||||||||||||||| || ||||    
T  27365861 atccacacctcaaggtgtgattatcaactttttagttataactt-gctaaaagacacctttataaaacctaggtggtgtcttttaacaaatgctcataga 27365763  T
Q  187 ataatttgttaaaagacaccttcata 212  Q
    |||| ||| |||||||||||||||||    
T  27365762 ataacttgctaaaagacaccttcata 27365737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 16490894 - 16490997
Alignment:
Q  46 gttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacct 145  Q
    ||||||||| ||||||||  || |||||| |||||| |||||    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16490894 gttttgctagaagccatcgctggagatgtattttagcaatcc----acacctcaaggtgtgattttcactttttagttataactttgctaaaagacacct 16490989  T
Q  146 tcataaaa 153  Q
    ||||||||    
T  16490990 tcataaaa 16490997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 5497757 - 5497839
Alignment:
Q  89 tccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtctttta 171  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||| | | |||||||| ||||||||||| |||||||||||||||    
T  5497757 tccacacttcaaggtgtgattatcaactttttagttataactt-gctgaaagacactttcataaaaattagttggtgtctttta 5497839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 16490733 - 16490795
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||||||| |||||||||||| |||||||||| |||||||||| ||||||||| ||||||||||    
T  16490733 ccacaccttaaggtgtgatttccactttttag-tataactttggtaaaagacatcttcataaaa 16490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 16273624 - 16273702
Alignment:
Q  134 taaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||   ||  |||| ||| |||||||||||||||||    
T  16273624 taaaagacaccttcataaaaattagtttgtgtcttttagcaaatgtctataagataacttgctaaaagacaccttcata 16273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 23129610 - 23129675
Alignment:
Q  88 atccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||||||||||||| ||||||| ||| | ||||||||||||||| ||||||||||||||||||||||    
T  23129610 atccacacctcaagatgtgattatcaaccttttagttataactt-gttaaaagacaccttcataaaa 23129675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 13960394 - 13960514
Alignment:
Q  92 acacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||||||||| ||||||| || |||||||||| ||||  ||| |||||||||||||||||||||| || | |||||||||| |||| |    ||| ||||    
T  13960394 acacctcaagatgtgattatccactttttagtcataaacttgctaaaagacaccttcataaaaattagct-gtgtcttttagcaaaggcctataggataa 13960492  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||||||||||    
T  13960493 cttgctaaaagacaccttcata 13960514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 31042562 - 31042626
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    ||||||| |||||||||| | |||||||||| || |||||||| ||||||||||||||||||||||    
T  31042562 acttttttgttataactt-gctaaaagacactttaataaaaattagttggtgtcttttaacaaatg 31042626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 35425249 - 35425306
Alignment:
Q  112 cactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtctttta 171  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  35425249 cactttttcgttataa-tttgttaaaagacaccgtcataaaaatcag-tggtgtctttta 35425306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 19863121 - 19863187
Alignment:
Q  88 atccacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaaa 154  Q
    ||||||| ||||| |||||||| || ||||||||||| |||||| ||||||||||||||||| |||||    
T  19863121 atccacatctcaaagtgtgattatccactttttagttttaactt-gttaaaagacaccttcacaaaaa 19863187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 31056411 - 31056467
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtctttt 170  Q
    |||||||| ||||||||| | |||||||||| || |||||||| ||||||||||||||    
T  31056411 actttttaattataactt-gctaaaagacactttaataaaaattagttggtgtctttt 31056467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 33696220 - 33696261
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaa 154  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  33696220 actttttagttatatctttgttaaaacacaccttaataaaaa 33696261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 17232931 - 17232879
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgt 165  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||| ||| |||||    
T  17232931 actttttagttatatctttgctaaaatacaccttaataaaaattagtaggtgt 17232879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 17421861 - 17421913
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgt 165  Q
    ||||||||||||||  |||||||||| ||||||| |||||||| ||| |||||    
T  17421861 actttttagttatatatttgttaaaacacaccttaataaaaattagtgggtgt 17421913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 6e-46; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 5224441 - 5224321
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  5224441 cacacctcaaggtgtgatttccactttttagttataactttgctaaaa-acaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataa 5224343  T
Q  191 tttgttaaaagacaccttcata 212  Q
     |||||||||||||||||||||    
T  5224342 cttgttaaaagacaccttcata 5224321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 253965 - 254081
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||| ||||||||     
T  253965 acacctcaaggtgtgattttcactttttagttataactttgctaaaagacactttcctaaaaattagttggtgtcttttaacaaatgttcatagaataac 254064  T
Q  192 ttgttaaaagacacctt 208  Q
    |||||||||||||||||    
T  254065 ttgttaaaagacacctt 254081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 661893 - 661777
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||| ||||||||     
T  661893 acacctcaaggtgtgattttcactttttagttataactttgctaaaagacactttcctaaaaattagttggtgtcttttaacaaatgttcatagaataac 661794  T
Q  192 ttgttaaaagacacctt 208  Q
    |||||||||||||||||    
T  661793 ttgttaaaagacacctt 661777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 26912295 - 26912457
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| |||||||     | | | ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  26912295 ggttttgctaaaagccacccatgaaggtgttttt-----agcaacccacacctcaaggtgtgattttcacttttcagttataactttgctaaaagacacc 26912389  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| ||||||||||||||| |||||| || |||||||| |||||||||||||| ||||||    
T  26912390 ttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgttaaaagacacattcata 26912457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 38498265 - 38498385
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||     
T  38498265 acacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatgttaatagaataac 38498364  T
Q  192 ttgttaaaagacaccttcata 212  Q
    ||| |||||||||||||||||    
T  38498365 ttgctaaaagacaccttcata 38498385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 16930776 - 16930939
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||| || |||||||| ||| |||||| |||||    ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||     
T  16930776 ggttttgctagaagtcacccatgaaggtgtcttttagcaatcc----acacctcaaggtgtgatttccactttttagttataactttgctaaaaaacact 16930871  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| |||||||||||||||| ||||| || |||||||| ||| |||||||||||||||||    
T  16930872 ttcataaaaattagttggtgtcttttaaaaaatgctcatagaataacttgctaaaagacaccttcata 16930939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 45 - 208
Target Start/End: Original strand, 33568040 - 33568199
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||| ||| ||| || |||||||| |||||||||| |||||    |||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  33568040 ggttttactagaagtcacccatgaaggtgttttttagcaatcc----acacctcaaggtgtgatttttattttttagttataactttgctaaaagacacc 33568135  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacacctt 208  Q
    ||||||||||  |||||||||||||||||||||| || |||||||| ||| |||||||||||||    
T  33568136 ttcataaaaactagttggtgtcttttaacaaatgctcatagaataacttgataaaagacacctt 33568199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 39077308 - 39077418
Alignment:
Q  102 gtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaag 201  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||    
T  39077308 gtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaag 39077407  T
Q  202 acaccttcata 212  Q
    |||||||||||    
T  39077408 acaccttcata 39077418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 22812335 - 22812452
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  22812335 ccacacctcaagatgtgattttcactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaata 22812434  T
Q  190 atttgttaaaagacacct 207  Q
    |  || ||||||| ||||    
T  22812435 acgtgctaaaagatacct 22812452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 847691 - 847575
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||| | | ||||||| ||||||||||||||||||||||||| ||||||||     
T  847691 acacctcaaggtgtgattttcactttttagttttaactttgctaaaagacacttccctaaaaattagttggtgtcttttaacaaatgttcatagaataac 847592  T
Q  192 ttgttaaaagacacctt 208  Q
    |||||||||||||||||    
T  847591 ttgttaaaagacacctt 847575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 9478897 - 9478745
Alignment:
Q  44 aggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacac 143  Q
    ||||| ||||| |||||| |||||||||| | |||||| || |||    |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  9478897 aggttatgctagaagccacccatgaagatatcttttagcaaccca----cacctcaaagtgtgatttccactttttagttataactttgttaaaagacac 9478802  T
Q  144 cttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaa 200  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||| ||| |||||    
T  9478801 cttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgctaaaa 9478745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 40067566 - 40067687
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    ||||||||||| |||||||| |||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||| ||  ||||||||    
T  40067566 cacacctcaagatgtgatttccactttttagttataattttgttaaaatacaccttcataaaaattagttggtgtcttttaacaaatatttatagaataa 40067665  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||| ||||||    
T  40067666 cttgctaaaagacacattcata 40067687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 10078445 - 10078326
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| |||||||||||||   ||||| |||||||||||||||||||||| ||||||||||||||| |||||| || |||||||    
T  10078445 ccacacctcaaggtgtgatttccactttttagtta---ctttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaata 10078349  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||||||||||    
T  10078348 acttgctaaaagacaccttcata 10078326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 28969113 - 28969233
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| | |||||||||||||||||||| || |||||||    
T  28969113 ccacacttcaaggtgtgatttccactttttagttataactttgttaaaagatactttcataaaaattaattggtgtcttttaacaaatgctcatagaata 28969212  T
Q  190 atttgttaaaagacaccttca 210  Q
    | ||| ||||| |||||||||    
T  28969213 aattgctaaaaaacaccttca 28969233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 38092285 - 38092157
Alignment:
Q  46 gttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacct 145  Q
    ||||||||| ||| |||| || |||||||||||||||||||||    ||| |||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  38092285 gttttgctagaagtcatctataaagatgttttttagtaatcca----cacatcaaggtgtgatttccactttttagttataactttgttaaatgacacgt 38092190  T
Q  146 tcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||||| | ||||||||||||||||||||    
T  38092189 tcataaaaattaattggtgtcttttaacaaatg 38092157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 212
Target Start/End: Complemental strand, 42806394 - 42806231
Alignment:
Q  47 ttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacctt 146  Q
    |||||||||||||  ||||||||  ||| ||||||    | ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  42806394 ttttgctataagcggtccatgaaagtgtcttttag----caatccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacacctt 42806299  T
Q  147 cataaaaatcagttggtgtcttttaacaaatgttc--gtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||| |||| ||||||| ||||||||| ||   || ||||||||| ||||||||| |||||||    
T  42806298 cataaaaattagtttgtgtcttctaacaaatgctcatataaaataatttgctaaaagacatcttcata 42806231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 12295179 - 12295301
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | | ||||| |||||||||||||| |  |||||||    
T  12295179 ccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaatttaattggtatcttttaacaaatgctaatagaata 12295278  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||| ||||||    
T  12295279 acttgctaaaagacacattcata 12295301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 103 - 212
Target Start/End: Complemental strand, 9479545 - 9479436
Alignment:
Q  103 tgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaaga 202  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||| || |||||||| ||| |||||||    
T  9479545 tgtgatttccactttttagttataactttgttaaaagacactttcataaaaattagtttgtgtcttttagcaaatgctcatagaataacttgctaaaaga 9479446  T
Q  203 caccttcata 212  Q
    ||||||||||    
T  9479445 caccttcata 9479436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 14916676 - 14916797
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||| || ||||||||    
T  14916676 cacaccttaaggtgtgattttcacttttttgttataactttgttaaaagataccttcataaaaattagttggtatcttttagcaaatgctcatagaataa 14916775  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| ||||| |||| ||||||    
T  14916776 cttgctaaaaaacacattcata 14916797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 19922695 - 19922566
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| || |||    |||||||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  19922695 ggttttgctagaagccacccatgaaggtgtcttttagcaaccca----cacctcaaggtgtgatttccaccttttagttataactttgctaaaagacacc 19922600  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    ||||||||||| | ||||||||||||||||||||    
T  19922599 ttcataaaaattaattggtgtcttttaacaaatg 19922566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 28539307 - 28539193
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| || || ||||    
T  28539307 ccacatctcaatgtttgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttaacaaatgctcataaaata 28539208  T
Q  190 atttgttaaaagaca 204  Q
    | ||| |||||||||    
T  28539207 acttgctaaaagaca 28539193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 30774269 - 30774147
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||| || |||||||||||||| ||||||| ||||||| |||||| || |||||||    
T  30774269 ccacaccttaaggtgtgatttccactttttagttatacctttgttaaaggataccttcataaaaattagttggtatcttttagcaaatgctcatagaata 30774170  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| ||||| |||||||||||    
T  30774169 acttgctaaaaaacaccttcata 30774147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 1983493 - 1983613
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataat 191  Q
    |||| |||| ||||||||||||| ||||||||||| ||||| |||||||||| ||||||||||| ||||| | | ||||||||||| ||  |||||||||    
T  1983493 acacatcaatgtgtgattttcacattttagttatagctttgctaaaagacactttcataaaaattagttgatattttttaacaaatttttatagaataat 1983592  T
Q  192 ttgttaaaagacaccttcata 212  Q
    |||||||||||||||||||||    
T  1983593 ttgttaaaagacaccttcata 1983613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 14041468 - 14041352
Alignment:
Q  96 ctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgt 195  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||   ||| |||| |||     
T  14041468 ctcaaggtgtgatatccactttttagttataactttgttaaaagacaccttcataaaaattaattggtgttttttaacaaatgtcaataggataacttgc 14041369  T
Q  196 taaaagacaccttcata 212  Q
    ||||| |||||||||||    
T  14041368 taaaaaacaccttcata 14041352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 23472651 - 23472536
Alignment:
Q  96 ctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgt 195  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||| |||||  || ||||||||  ||     
T  23472651 ctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttagcaaatcctcatagaataa-ctgc 23472553  T
Q  196 taaaagacaccttcata 212  Q
    |||||||||||||||||    
T  23472552 taaaagacaccttcata 23472536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 31272793 - 31272909
Alignment:
Q  96 ctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgt 195  Q
    |||||| |||||||| |||||||||||||||| |||| ||||||||| ||| |||||||| ||||| |||||||||||||||  || |||||||||||||    
T  31272793 ctcaagatgtgatttccactttttagttataattttgctaaaagacatctttataaaaattagttgttgtcttttaacaaatactcatagaataatttgt 31272892  T
Q  196 taaaagacaccttcata 212  Q
    ||||| |||||||||||    
T  31272893 taaaaaacaccttcata 31272909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 16784467 - 16784352
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| || |||||||||||||||||| ||       ||||||||||||| ||||||||||||||||||||||||  || ||||    
T  16784467 ccacacctcaaggtgtgatttccattttttagttataactttgcta-------ccttcataaaaattagttggtgtcttttaacaaatgttaatataata 16784375  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||||||||||    
T  16784374 acttgctaaaagacaccttcata 16784352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 41829567 - 41829654
Alignment:
Q  125 taactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| |||||||| ||| ||||||||| |||||||    
T  41829567 taactttgttaaaagacatcttcataaaaattagtttgtgtcttttaacaaatgttcatagaataacttgctaaaagacatcttcata 41829654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 212
Target Start/End: Complemental strand, 44874093 - 44873934
Alignment:
Q  50 tgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcacttt-ttagttataactttgttaaaagacaccttca 148  Q
    ||||| |||||| |||||||| ||| |||||| ||||||    ||||  ||||| |||||| |||||  ||| ||||||||||| |||||||||||||||    
T  44874093 tgctagaagccacccatgaaggtgtcttttagcaatcca----caccctaaggtttgatttccacttcattaattataactttgctaaaagacaccttca 44873998  T
Q  149 taaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||| || |||||||||||| |||||| || |||||||| ||| ||||| |||||||||||    
T  44873997 taaaaattagctggtgtcttttagcaaatgctcatagaataacttgctaaaaaacaccttcata 44873934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 41624623 - 41624737
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    ||||||||||||||||| |||||||  ||| |||||| ||  ||    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41624623 ggttttgctataagccacccatgaaagtgtcttttagcaactca----cacctcaaggtgtgatttttactttttagttataactttgttaaaagacacc 41624718  T
Q  145 ttcataaaaatcagttggt 163  Q
    ||| ||||| | |||||||    
T  41624719 ttcgtaaaatttagttggt 41624737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 3210839 - 3210943
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| || |||    ||||||||||||| |||| ||||||||| ||||||||||| |||||||||||    
T  3210839 ggttttgctagaagccacccatgaaggtgtcttttagcaaccca----cacctcaaggtgttatttccactttttaattataactttgctaaaagacacc 3210934  T
Q  145 ttcataaaa 153  Q
    |||||||||    
T  3210935 ttcataaaa 3210943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 16645497 - 16645556
Alignment:
Q  94 acctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  16645497 acctcaaggtgtgatttccactttttagttataactttactaaaagacaccttcataaaa 16645556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 1271036 - 1271117
Alignment:
Q  91 cacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaa 172  Q
    ||||| ||||||||||||| || |||||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  1271036 cacacttcaaggtgtgattatccactttttaattataactt-gttaaaagacaccttcataaaaattagttggtgtattttaa 1271117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 12176179 - 12176341
Alignment:
Q  46 gttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacacc 144  Q
    |||||||| |||| || |||||||| ||| |||||| ||||||    ||||||||||||||||| ||| ||||||||||||||| | | |||||||||||    
T  12176179 gttttgctgtaagacacccatgaaggtgtcttttagcaatcca----cacctcaaggtgtgattatcaactttttagttataacct-gctaaaagacacc 12176273  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    || |||||||| | ||||||||||||| ||| ||    ||| |||| ||| ||||| |||||||||||    
T  12176274 ttgataaaaattatttggtgtcttttagcaattgcctataggataacttgctaaaacacaccttcata 12176341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 12420607 - 12420769
Alignment:
Q  46 gttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacacc 144  Q
    |||||||| |||| || |||||||| ||| |||||| ||||||    ||||||||||||||||| ||| ||||||||||||||| | | |||||||||||    
T  12420607 gttttgctgtaagacacccatgaaggtgtcttttagcaatcca----cacctcaaggtgtgattatcaactttttagttataacct-gctaaaagacacc 12420701  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    || |||||||| | ||||||||||||| ||| ||    ||| |||| ||| ||||| |||||||||||    
T  12420702 ttgataaaaattatttggtgtcttttagcaattgcctataggataacttgctaaaacacaccttcata 12420769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 13326964 - 13327064
Alignment:
Q  110 ttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttc 209  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||| |||||| |||||||| |||||| || || ||||| ||| ||||||| ||||||    
T  13326964 ttcactttttagttataactt-gataaaagacaacttcataaaaattagttggcgtcttttagcaaatg-tcataaaataacttgctaaaagataccttc 13327061  T
Q  210 ata 212  Q
    |||    
T  13327062 ata 13327064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 39589964 - 39590014
Alignment:
Q  103 tgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  39589964 tgtgaattccactttttagttataactttgctaaaagacaccttcataaaa 39590014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 40067453 - 40067530
Alignment:
Q  44 aggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttat 125  Q
    ||||||||||| ||| || |||||||||||| ||||||||| |||    || ||||||||||||||| ||||||||||||||    
T  40067453 aggttttgctagaagtcacccatgaagatgtcttttagtaaccca----catctcaaggtgtgatttccactttttagttat 40067530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 44473833 - 44473770
Alignment:
Q  148 ataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcat 211  Q
    |||||||| |||||||||||||||||||||  || || ||||| ||| ||||||||||||||||    
T  44473833 ataaaaattagttggtgtcttttaacaaatactcatacaataacttgctaaaagacaccttcat 44473770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 39077208 - 39077162
Alignment:
Q  107 attttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||||    
T  39077208 atttccactttttagttataactttgctaaaagacacattcataaaa 39077162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 35550773 - 35550814
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaa 154  Q
    |||||||| ||||| ||||||||||||||||||| |||||||    
T  35550773 actttttacttatatctttgttaaaagacaccttaataaaaa 35550814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 40301412 - 40301372
Alignment:
Q  112 cactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  40301412 cactttttagttataactt-gctaaaagacaccttcataaaa 40301372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 44508922 - 44508955
Alignment:
Q  94 acctcaaggtgtgattttcactttttagttataa 127  Q
    ||||||||||||||||||||| ||||||||||||    
T  44508922 acctcaaggtgtgattttcaccttttagttataa 44508955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 1201684 - 1201632
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgt 165  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||| ||| |||||    
T  1201684 actttttagttatatctttgctaaaacacaccttaataaaaattagtgggtgt 1201632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 32069037 - 32068985
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgt 165  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||  |||||||||    
T  32069037 actttttagttatatctttgctaaaacacaccttaataaaaactagttggtgt 32068985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 4e-44; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 21993613 - 21993491
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| |  |||||||    
T  21993613 ccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaaaaaatgctaatagaata 21993514  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||||||||||    
T  21993513 acttgctaaaagacaccttcata 21993491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 208
Target Start/End: Original strand, 41378344 - 41378501
Alignment:
Q  47 ttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacctt 146  Q
    |||||||| |||||| |||||||| ||| |||||| || |||    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  41378344 ttttgctagaagccacccatgaaggtgtcttttagcaaccca----cacctcaaggtgtgatttccactttttagttataactttgctaaaagacacctt 41378439  T
Q  147 cataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacacctt 208  Q
    ||||||||| | ||||||||||||| ||||||||| |||||||| ||| ||||| |||||||    
T  41378440 cataaaaattaattggtgtcttttagcaaatgttcatagaataacttgctaaaaaacacctt 41378501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 24611559 - 24611437
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||| ||  ||||||    
T  24611559 ccacacctcaatgtgtgattttcactttttagttataactttgttaaaagacactttcataaaaattagttggtatcttttaataaatgctcagagaata 24611460  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||||||||||    
T  24611459 acttgctaaaagacaccttcata 24611437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 31953301 - 31953180
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||| || |||| |||    
T  31953301 cacacctcaaggtgtgatttccactttttagttataactttgttaaaaaacaccttcataaaaattaattgatgtcttttaacaaatgctcatagactaa 31953202  T
Q  191 tttgttaaaagacaccttcata 212  Q
     ||| |||||||||||||||||    
T  31953201 cttgctaaaagacaccttcata 31953180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 3203259 - 3203425
Alignment:
Q  46 gttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataacttt----gttaaaagac 141  Q
    ||||||||| || |||||||||||| ||| ||||||    | | |||||||||||||||||||||||||||||||||||||| |||    | ||||||||    
T  3203259 gttttgctagaaaccatccatgaaggtgtcttttag----caacccacacctcaaggtgtgattttcactttttagttataaatttgctagctaaaagac 3203354  T
Q  142 accttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||||||| ||||||||||||| |||||||| || |||||||| ||| |||||||||||||||||    
T  3203355 accttcataaaaattagttggtgtctttaaacaaatgctcatagaataacttgctaaaagacaccttcata 3203425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 35983250 - 35983128
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||||||||| |||||| || |||||||    
T  35983250 ccacaccttaaggtgtgattttcactttttagttataactttgctaaaagataccttcataaaaattaattggtgtcttttagcaaatgctcatagaata 35983151  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| ||||||||| |||||||    
T  35983150 acttgctaaaagacatcttcata 35983128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 36004662 - 36004540
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||||||||| |||||| || |||||||    
T  36004662 ccacaccttaaggtgtgattttcactttttagttataactttgctaaaagataccttcataaaaattaattggtgtcttttagcaaatgctcatagaata 36004563  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| ||||||||| |||||||    
T  36004562 acttgctaaaagacatcttcata 36004540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 41037268 - 41037146
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | |||| |||||||||| |||||| || |||||||    
T  41037268 ccacatctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaacttagtttgtgtcttttaccaaatgctcatagaata 41037169  T
Q  190 atttgttaaaagacaccttcata 212  Q
    ||||  |||||||||||||||||    
T  41037168 atttactaaaagacaccttcata 41037146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 45100114 - 45099992
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||| ||||||| |||||||| |||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||| || | |||||    
T  45100114 ccacgcctcaagatgtgatttacactttttagttgtaactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcattgaata 45100015  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||||||||| |||||||||||    
T  45100014 acttgttaaaaaacaccttcata 45099992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 48227243 - 48227365
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||| || |||||||    
T  48227243 ccacacttcaaggtgtgatttccactttttagttataactttgctaaaagacacctttataaaaattagttggtgtcttttagcaaatgatcatagaata 48227342  T
Q  190 atttgttaaaagacaccttcata 212  Q
      ||| ||||| |||||||||||    
T  48227343 tcttgctaaaatacaccttcata 48227365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 212
Target Start/End: Original strand, 5995025 - 5995187
Alignment:
Q  47 ttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttt-tagttataactttgttaaaagacacct 145  Q
    |||||||| ||| ||||||||||| ||| |||||| |||| |    |||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||    
T  5995025 ttttgctagaagtcatccatgaaggtgtcttttagcaatcta----cacctcaaggtgtgatttacacttttttagttataattttgctaaaagacacct 5995120  T
Q  146 tcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||||| ||||||||||||||| |||||| || || ||||| ||| |||||||||| ||||||    
T  5995121 tcataaaaattagttggtgtcttttagcaaatgctcatataataacttgctaaaagacactttcata 5995187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 41585891 - 41585979
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    ||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  41585891 ccacacctcaaggtgtgatttccactttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg 41585979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 3961320 - 3961198
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||||||| ||| ||||||| ||||||||||||| |||| ||||| ||||||| |||||||| |||||||||||||||||||||| || |||||||    
T  3961320 ccacacctcaagatgtcattttcaatttttagttataattttgctaaaaaacaccttaataaaaattagttggtgtcttttaacaaatgatcatagaata 3961221  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||| ||||||    
T  3961220 acttgctaaaagacactttcata 3961198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 9522437 - 9522597
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| | |||| |||||    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  9522437 ggttttgctagaagccacccatgaaggtgtctcttagcaatcc----acacctcaaggtgtgatttccactttttagttataactttgataaaagacacc 9522532  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |   ||||||| |||||||||||||||  ||||  ||||||| ||| ||| ||||||||| |||||||    
T  9522533 t---taaaaattagttggtgtcttttaggaaatcctcgtagattaacttgctaaaagacatcttcata 9522597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 211
Target Start/End: Original strand, 46003753 - 46003866
Alignment:
Q  99 aaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg-ttcgtagaataatttgtta 197  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||| |||||| ||| |||| ||| ||| ||    
T  46003753 aaggtgtaattttcactttttagttataactttgctaaaagacacctttataaaaattagttgatgtcttttagcaaatgcttcatagagtaacttgcta 46003852  T
Q  198 aaagacaccttcat 211  Q
    ||||||||||||||    
T  46003853 aaagacaccttcat 46003866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 26927978 - 26928054
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtct 167  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  26927978 cacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtct 26928054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 90 - 189
Target Start/End: Original strand, 35221677 - 35221776
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||||||||||  ||||  |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  35221677 ccacacctcaaggtgaaatttctactttttagttataacttagctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaata 35221776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 43077514 - 43077627
Alignment:
Q  99 aaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaa 198  Q
    |||||||||| |||| |||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||||||||||||   ||||| || ||| |||    
T  43077514 aaggtgtgatattcattttttagttataactttgctaaaagaaaccttgataaaaattagttggtgtcttttaacaaatgtcaatagaaaaacttgctaa 43077613  T
Q  199 aagacaccttcata 212  Q
    || |||||||||||    
T  43077614 aaaacaccttcata 43077627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 27131142 - 27131052
Alignment:
Q  88 atccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||||    
T  27131142 atccacacctcaaggtgtgattatcaactttttagttataactt-gctaaaagacaccttcataaaaattagttggtgtcttttagcaaatg 27131052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 14656597 - 14656532
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaat 155  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14656597 ccacacctcaatgtgtgattttcaccttttagttataactttgttaaaagacaccttcataaaaat 14656532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 12362868 - 12362966
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    |||||||| |||||| |||||||||||||| ||||||||||||  |||| |||||||||||||||||   |||||||| |||||||||||||| ||||||    
T  12362868 actttttaattataa-tttgttaaaagacatcttcataaaaatttgttgatgtcttttaacaaatgtctatagaataacttgttaaaagacacattcata 12362966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 20009197 - 20009256
Alignment:
Q  94 acctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20009197 acctcaagatgtgatttttactttttagttataactttgttaaaagacaccttcataaaa 20009256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 28333734 - 28333835
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||||||  ||||||| ||| |||||| || |||   |||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  28333734 ggttttgctagaagccactcatgaaggtgtcttttagcaa-cca---acacgtcaaggtgtgattttcactttttagttataactttgctaaaagacacc 28333829  T
Q  145 ttcata 150  Q
    ||||||    
T  28333830 ttcata 28333835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 3350026 - 3350104
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtctt 168  Q
    ||||| ||||||||||||||| |||||||||||||||| |||| |||||||||||||||| ||||  ||||||||||||    
T  3350026 ccacatctcaaggtgtgatttccactttttagttataattttgctaaaagacaccttcattaaaagtagttggtgtctt 3350104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 20568404 - 20568279
Alignment:
Q  88 atccacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaaa-tcagttggtgtcttttaacaaatgttcgtag 185  Q
    |||||||||||||||||||||| || ||||||||||||||| |||| || |||||||||| ||||||| | | ||||||||||||| ||||||||  |||    
T  20568404 atccacacctcaaggtgtgattatccactttttagttataa-tttgctacaagacaccttgataaaaaattacttggtgtcttttagcaaatgttaatag 20568306  T
Q  186 aataatttgttaaaagacaccttcata 212  Q
     |||| ||| |||||||||| ||||||    
T  20568305 gataacttgctaaaagacacattcata 20568279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 42373471 - 42373592
Alignment:
Q  91 cacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||  ||||||| || |||||||||||| ||||| | ||||||||| |||||||||||| | |||||||||||||||||||||   ||| |||    
T  42373471 cacacctcaatatgtgattatccactttttagttagaactt-gctaaaagacatcttcataaaaattaattggtgtcttttaacaaatgtcaataggata 42373569  T
Q  190 atttgttaaaagacaccttcata 212  Q
    ||||| |||||||||| ||||||    
T  42373570 atttgctaaaagacacattcata 42373592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 27946861 - 27946957
Alignment:
Q  115 tttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||     |||||||| ||| |||||||||||| ||||    
T  27946861 tttttagttataa-tttgttaaaagacaccttcataaaaattagttggtgtgttttaacaaatagctatagaataacttgctaaaagacacctccata 27946957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 48709045 - 48709135
Alignment:
Q  88 atccacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||||||||||||||| | || |||||||||| ||||||| | |||||||||||||||||||||| |||| |||||||||| ||||||    
T  48709045 atccacacctcaaggtgtgactatccactttttagtaataactt-gctaaaagacaccttcataaaaattagttagtgtcttttagcaaatg 48709135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 24251948 - 24251884
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| ||||||    
T  24251948 actttttagttataactt-gttaaaagacaccttcataaaaattaattggtgtcttttagcaaatg 24251884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 38368302 - 38368213
Alignment:
Q  91 cacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgtt 180  Q
    ||||||||||||| || || || | |||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  38368302 cacacctcaaggtatgtttatccaatttttagttataactt-gctaaaatacaccttcataaaaattagttggtgtcttttagcaaatgtt 38368213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 32392208 - 32392313
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacac 143  Q
    |||||||||| |||||| |||||||| ||| |||||| || |||    |||||||||||| |||| || |||||||||||||||  ||| ||||||||||    
T  32392208 ggttttgctagaagccacccatgaaggtgtcttttagcaaccca----cacctcaaggtgagattatccactttttagttataaacttgctaaaagacac 32392303  T
Q  144 cttcataaaa 153  Q
    ||||||||||    
T  32392304 cttcataaaa 32392313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 7596892 - 7596953
Alignment:
Q  91 cacacctcaaggtgtgattttc-actttttagttataactttgttaaaagacaccttcataaa 152  Q
    |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  7596892 cacacctcaatgtgtgattatccactttttagttataa-tttgttaaaagacaccttcataaa 7596953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 36343110 - 36343024
Alignment:
Q  127 actttgttaaaagacacc-ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||| |||||| ||||| || |||||||| |||||||||||||||||||||| || || ||||| ||||||||| ||| |||||||    
T  36343110 acttttttaaaaaacaccatttataaaaattagttggtgtcttttaacaaatgctcataaaataacttgttaaaaaacatcttcata 36343024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 48624971 - 48625021
Alignment:
Q  103 tgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    |||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  48624971 tgtgatttccattttttagttataactttgctaaaagacaccttcataaaa 48625021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 3875283 - 3875209
Alignment:
Q  88 atccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaaatcagttggt 163  Q
    ||||| |||||||||||||||| ||| ||||||| ||||||||| ||||||||| |||||||||||||| |||||||    
T  3875283 atccatacctcaaggtgtgattatcaacttttta-ttataactt-gttaaaagaaaccttcataaaaattagttggt 3875209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 44868036 - 44868091
Alignment:
Q  112 cactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtctt 168  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||| ||| ||||||||    
T  44868036 cactttttagttataactt-gttaaaaaacactttcataaaaattagtgggtgtctt 44868091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 8953301 - 8953365
Alignment:
Q  91 cacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaaat 155  Q
    ||||| ||||||||||||| ||| ||||||||||||||| || |||||||||| ||||||| ||||    
T  8953301 cacacatcaaggtgtgattatcaactttttagttataac-ttattaaaagacatcttcatacaaat 8953365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 3407179 - 3407222
Alignment:
Q  110 ttcactttttagttataactttgttaaaagacaccttcataaaaa 154  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||    
T  3407179 ttcactttttagttataac-ttgctaaaagacagcttcataaaaa 3407222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 9401669 - 9401617
Alignment:
Q  113 actttttagttataactttgttaaaagacaccttcataaaaatcagttggtgt 165  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||| ||| |||||    
T  9401669 actttttagttatatctttgctaaaacacaccttaataaaaattagtgggtgt 9401617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 15081305 - 15081142
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| || |||    |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  15081305 ggttttgctagaagccacccatgaaggtgtcttttagcaaccca----cacctcaaggtgtgatttccactttttagttataactttgctaaaagacacc 15081210  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||| ||| | |||||||||||||||||||| || |||||||| ||| |||||||||||||||||    
T  15081209 ttcataacaattaattggtgtcttttaacaaatgctcatagaataacttgctaaaagacaccttcata 15081142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 10075135 - 10075014
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataa 190  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||    
T  10075135 cacacctcaaggtgtgatttccactttttaattataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatattcataaaataa 10075036  T
Q  191 tttgttaaaagacaccttcata 212  Q
     |||||||||||||| ||||||    
T  10075035 cttgttaaaagacactttcata 10075014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 12159461 - 12159583
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| |  || ||||    
T  12159461 ccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttctaacaaatgctaatataata 12159560  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| |||||||||||||||||    
T  12159561 acttgctaaaagacaccttcata 12159583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 17347018 - 17347181
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||| ||||| ||||||||||||||| |||||||||| |||||||    || | |||||||||||| ||||||||||||||||||||| ||||||||| |    
T  17347018 ggttatgctagaagccatccatgaaggtgttttttagcaatccat----actttaaggtgtgatttccactttttagttataactttgctaaaagacatc 17347113  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| |||||||||||||||||||||| |  || ||||| ||| |||||||||||||||||    
T  17347114 ttcataaaaattagttggtgtcttttaacaaatgctaatataataacttgctaaaagacaccttcata 17347181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 6322674 - 6322511
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||||||||||||||| ||| |||||| ||||||    ||||| |||||||| ||| ||||||||||||||||||||| |||||||||||    
T  6322674 ggttttgctagaagccatccatgaaggtgtcttttagcaatcca----caccttaaggtgtggtttccactttttagttataactttgctaaaagacacc 6322579  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||| | || |||| |||||||||||| |  |||||||| ||||||||| ||||| |||||    
T  6322578 ttcataaaaattaatttgtgttttttaacaaatgctaatagaataacttgttaaaaaacaccctcata 6322511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 18096468 - 18096354
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||      ||||||||||||| |||||||||||||||||||||| || |||||||    
T  18096468 ccacacctcaaggtgtgatttccactttttagttataactctgctaa------ccttcataaaaattagttggtgtcttttaacaaatgctcatagaata 18096375  T
Q  190 atttgttaaaagacaccttca 210  Q
    | ||| |||||||||||||||    
T  18096374 acttgctaaaagacaccttca 18096354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 19104310 - 19104409
Alignment:
Q  107 attttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacacc 206  Q
    |||| ||||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||||||| || || ||||||||| |||||||||||    
T  19104310 atttccactttttagttataactttgctaaaacacaccttcgtaaaaattagttggtgtcttttaacaaatgctcataaaataatttgctaaaagacacc 19104409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 9533513 - 9533424
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  9533513 atccacacctcaaggtgtgatttccacttttaa-ttataactttgttaaaagacaccttcataaaaatttgttagtgtcttttaacaaatg 9533424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 18102588 - 18102475
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||      ||||||||||||| |||||||||||||||||||||| || |||||||    
T  18102588 ccacacctcaaggtgtgatttccactttttagttataactctgctaa------ccttcataaaaattagttggtgtcttttaacaaatgctcatagaata 18102495  T
Q  190 atttgttaaaagacaccttc 209  Q
    | ||| ||||| ||||||||    
T  18102494 acttgctaaaaaacaccttc 18102475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 9891494 - 9891398
Alignment:
Q  112 cactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacacctt 208  Q
    |||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||||||||||||    ||| |||||||| |||||||||||||    
T  9891494 cactttttagttataaatttgctaaaagacacattcataaaaattagttggtgtcttttaacaaatgacaataggataatttgctaaaagacacctt 9891398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 29427245 - 29427304
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttc 147  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  29427245 atccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacaccttc 29427304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 25090546 - 25090624
Alignment:
Q  102 gtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgtt 180  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||||||||||| | ||||||| |||| |||||||||    
T  25090546 gtgtgatttccactttttagttataactttgctgaaagacaccttcataaaaattaattggtgttttttgacaaatgtt 25090624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 178
Target Start/End: Original strand, 14975378 - 14975505
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| || |||    ||||| ||||| |||||||||| |||||||||||| |||| ||||| |||||    
T  14975378 ggttttgctagaagccacccatgaaggtgtcttttagcaaccca----caccttaaggtatgattttcaccttttagttataa-tttgctaaaaaacacc 14975472  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    ||||| ||||| |||||||||||||||| |||||    
T  14975473 ttcat-aaaattagttggtgtcttttaaaaaatg 14975505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 32645783 - 32645707
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtc 166  Q
    |||||||||||||| |||| | ||||||||||| | |||||||||||||||||| ||||||||||| ||||||||||    
T  32645783 ccacacctcaaggtatgatatccactttttagtaagaactttgttaaaagacactttcataaaaattagttggtgtc 32645707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 19143739 - 19143648
Alignment:
Q  56 aagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||||||||||| | | |||||| |||||||    ||||||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||    
T  19143739 aagccatccatgaaggtttcttttagaaatccat----acctcaaggtgtgatttccactttttagttata--tttgctaaaagacaccttcataaaa 19143648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 24553222 - 24553285
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaat 155  Q
    |||||| ||||| |||||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  24553222 acaccttaaggtatgatttccactttttagttataactttattaaaaaacaccttcataaaaat 24553285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 28295635 - 28295569
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgtt---aaaagacaccttcataaaa 153  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||   |||||||||||||||||||    
T  28295635 ccacacctcaaggtgtgatatccactttttggttataactttgttaaaaaaagacaccttcataaaa 28295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 28516438 - 28516504
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgtt---aaaagacaccttcataaaa 153  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||   |||||||||||||||||||    
T  28516438 ccacacctcaaggtgtgatatccactttttggttataactttgttaaaaaaagacaccttcataaaa 28516504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 7190739 - 7190635
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||| |||||||||||||||| ||||||| ||||||||        |||||||||||||||| |||||||||||||||| ||||  |  |||||||    
T  7190739 ccacaccttaaggtgtgattttcaccttttagtcataacttt--------acaccttcataaaaattagttggtgtcttttaataaatacttatagaata 7190648  T
Q  190 atttgttaaaaga 202  Q
    | ||| |||||||    
T  7190647 acttgataaaaga 7190635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 29375269 - 29375231
Alignment:
Q  116 ttttagttataactttgttaaaagacaccttcataaaaa 154  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  29375269 ttttagttataactttattaaaagacatcttcataaaaa 29375231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 8062132 - 8062088
Alignment:
Q  110 ttcactttttagttataactttgttaaaagacaccttcataaaaat 155  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  8062132 ttcactttttaattataactt-gttaaaagacacctttataaaaat 8062088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 35199 - 35075
Alignment:
Q  88 atccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaa 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||| |||||| || |||||    
T  35199 atccacacctcaaggtgtgattttcactttttagttataactttgctaaaagacaccttcataaaaattagtcggtgtctcttagcaaatgctcatagaa 35100  T
Q  188 taatttgttaaaagacaccttcata 212  Q
    ||| ||| |||||||||||||||||    
T  35099 taacttgctaaaagacaccttcata 35075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 478438 - 478331
Alignment:
Q  105 tgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||||| |||    
T  478438 tgattttcactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaaaaca 478339  T
Q  205 ccttcata 212  Q
    ||||||||    
T  478338 ccttcata 478331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 94781 - 94909
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| ||||||||||||||| ||| ||||||    | | ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  94781 ggttttgctagaagccatccatgaaggtgtcttttag----caacccacacctcaaggtgtgatttccactttttagttataactttgctaaaagacacc 94876  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaat 177  Q
    ||||||||||| |||||||||||||||||||||    
T  94877 ttcataaaaattagttggtgtcttttaacaaat 94909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 231154 - 231264
Alignment:
Q  102 gtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaag 201  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  231154 gtgtgatttccactttttaattataactttgttataagacaccttcataaaaattagttggtatcttttaacaaatgttcatagaataatttgttaaaag 231253  T
Q  202 acaccttcata 212  Q
    |||||||||||    
T  231254 acaccttcata 231264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 9335 - 9173
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||||||||||||||||||| ||| |||| |    | ||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||    
T  9335 ggttttgctataagccatccatgaaggtgtcttttcg----caatccacacctcaaggtgtgatttccactttttagttataattttgctaaaagacacc 9240  T
Q  145 ttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||| ||||| ||||||| ||||||| |||||| || |||||||| ||| ||||| |||||||||||    
T  9239 ttcat-aaaattagttggtatcttttagcaaatgctcatagaataacttgctaaaatacaccttcata 9173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 47 - 212
Target Start/End: Original strand, 121607 - 121768
Alignment:
Q  47 ttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacctt 146  Q
    |||||||| ||||||  ||||||| |||||||||| |||||||    |  |||||||||||||| |||||||||||||||| |||| |||||||| | ||    
T  121607 ttttgctagaagccactcatgaaggtgttttttagcaatccat----atttcaaggtgtgatttccactttttagttataattttgctaaaagactcatt 121702  T
Q  147 cataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||| | ||||||||||||| |||||| || |||||||| |||||||||||||||||||||    
T  121703 cataaaaattaattggtgtcttttagcaaatgctcatagaataacttgttaaaagacaccttcata 121768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 392549 - 392427
Alignment:
Q  90 ccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaata 189  Q
    |||||||| |||||||||||| |||||||||||||||  |||| |||||||||||||||||| ||| ||||||||||||||| |||||| || |||||||    
T  392549 ccacaccttaaggtgtgatttccactttttagttatacatttgctaaaagacaccttcataataattagttggtgtcttttagcaaatgctcatagaata 392450  T
Q  190 atttgttaaaagacaccttcata 212  Q
    | ||| ||||||||| |||||||    
T  392449 acttgctaaaagacatcttcata 392427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 17924 - 17839
Alignment:
Q  95 cctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgtt 180  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  17924 cctcaaggtgtgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttgatgtcttttaacaaatgtt 17839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 8500 - 8604
Alignment:
Q  45 ggttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacc 144  Q
    |||||||||| |||||| |||||||| ||| |||||| ||||||    ||||| |||||||||||| ||||||||||||||||||||||||||||||| |    
T  8500 ggttttgctagaagccacccatgaaggtgtcttttagcaatcca----cacctgaaggtgtgatttccactttttagttataactttgttaaaagacaac 8595  T
Q  145 ttcataaaa 153  Q
    |||||||||    
T  8596 ttcataaaa 8604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 3859 - 3773
Alignment:
Q  91 cacacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatg 178  Q
    |||||||||||||||||||| |  |||||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||    
T  3859 cacacctcaaggtgtgatttcctttttttagttataactttgctaaaa-acaccttcataaaaattagttggtgtctattaacaaatg 3773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 75105 - 75002
Alignment:
Q  47 ttttgctataagccatccatgaagatgttttttagtaatccatccacacctcaaggtgtgattttcactttttagttataactttgttaaaagacacctt 146  Q
    |||||||| |||||| |||||||| ||| |||||| || ||||    ||| ||||||||||||| ||||||||||||||||||||  |||||||||||||    
T  75105 ttttgctagaagccacccatgaaggtgtattttagcaacccat----accccaaggtgtgatttccactttttagttataactttactaaaagacacctt 75010  T
Q  147 cataaaaa 154  Q
     |||||||    
T  75009 aataaaaa 75002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 103259 - 103348
Alignment:
Q  90 ccacacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgt 179  Q
    |||||||||||| ||||||| ||| |||||||||||||||||  | |||| |||||||||||||| | ||||||||||||||| |||||||    
T  103259 ccacacctcaagttgtgattatcaactttttagttataacttcctaaaaa-acaccttcataaaagttagttggtgtcttttagcaaatgt 103348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 88185 - 88245
Alignment:
Q  92 acacctcaaggtgtgattttca-ctttttagttataactttgttaaaagacaccttcataaa 152  Q
    |||||||||||||||||| ||| |||||||||||||||||  | ||||||||||||||||||    
T  88185 acacctcaaggtgtgattatcaactttttagttataacttcct-aaaagacaccttcataaa 88245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 49934 - 49842
Alignment:
Q  119 tagttataactttgttaaaagacaccttcataaaaatcagttggtgtcttttaacaaatgttcgtagaataatttgttaaaagacaccttcata 212  Q
    ||||||||||||||||||||||||| || |||||||| | ||||| | ||||||||||||||| || ||||| ||| ||||||| || ||||||    
T  49934 tagttataactttgttaaaagacacatttataaaaattaattggtat-ttttaacaaatgttcataaaataacttgctaaaagatacattcata 49842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 35914 - 35975
Alignment:
Q  92 acacctcaaggtgtgattttcactttttagttataactttgttaaaagacaccttcataaaa 153  Q
    ||||||| ||||||| |||  ||||||||||||||| |||| ||||||||||||||||||||    
T  35914 acacctccaggtgtgttttctactttttagttataattttgctaaaagacaccttcataaaa 35975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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