View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14703_low_3 (Length: 415)
Name: NF14703_low_3
Description: NF14703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14703_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 3 - 398
Target Start/End: Complemental strand, 7199426 - 7199042
Alignment:
| Q |
3 |
atacaagtagggctttctcattattgttgtaggtaaaagaatgcatgtgtacattataatttattttcaggtgtaaacaatatactacaaaatgtatatt |
102 |
Q |
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| T |
7199426 |
atacaagtagggctttctcattattgttgtaggtaaaagaatgcatgtgtacattataatt-attttcaggtgtaaacaatat----------------t |
7199344 |
T |
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| Q |
103 |
catagatatagcatatggaaaaataatgtatacttacaatctgcatctgttttgatccaatgctctctgtaagaagatggatcttcttctggatgcacaa |
202 |
Q |
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| T |
7199343 |
catagacatagcatatgaaaaaataatgtatacttacaatctgcatctgttttgatccaatgctctctgtaagaagatggatcttcttctggatgcacaa |
7199244 |
T |
|
| Q |
203 |
ggtagcctttgttgtgacctccatcattcatatttttcttcttgttctcattctttcgatgtttaccagatttgtgtccaactgttgaattttctggatg |
302 |
Q |
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| T |
7199243 |
ggtagcctttgttgggacctccatcattcatatttttcttcttgttctcattctttcgatgtttaccagatttgtgtccaactgttgaattttctggatg |
7199144 |
T |
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| Q |
303 |
aacttttttccggaacatatggagaatctagaaaccaaaacca------aaactcataatcatgaacagaacaataccatttatctaccaagaccaaaaa |
396 |
Q |
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| T |
7199143 |
aacttttttcctgaacatatggagaatctagaaaccaaaaccaaaaccaaaacttataatcatgaacagaacaataccatttatctaccaagaccaaaaa |
7199044 |
T |
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