View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14703_low_8 (Length: 290)
Name: NF14703_low_8
Description: NF14703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14703_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 35446175 - 35445918
Alignment:
| Q |
19 |
gacactatctttttctaccgtcgtatgctttcttcccctcacaaaccttcttcctacaccttcacctccgttttcaaagcatgtgctcatctttctgctc |
118 |
Q |
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| T |
35446175 |
gacactatctttttctaccgtcgtatgctttcttcccctcacaaaccttcttcctacactttcacctccgttttcaaagcatgtgctcatctttctgctc |
35446076 |
T |
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| Q |
119 |
ttaaaataggaaccattcttcattctcatgttttcgtttctgggtttggttctaattcatttgtacaagctgcaattgttgctttttatgctaaatcgag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35446075 |
ttaaaataggaaccattcttcattctcatgttttcgtttctgggtttggttctaattcatttgtacaagctgcaattgttgctttttatgctaaatcgag |
35445976 |
T |
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| Q |
219 |
tgcattgtgtgttgcacgtaaggtgtttgataaaatgcctcaacgaagtgttgttgct |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35445975 |
tgcattgtgtgttgcacgtaaggtgtttgataaaatgcctcaacgaagtgttgttgct |
35445918 |
T |
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