View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14704_low_10 (Length: 331)

Name: NF14704_low_10
Description: NF14704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14704_low_10
NF14704_low_10
[»] chr8 (1 HSPs)
chr8 (23-313)||(10852425-10852710)


Alignment Details
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 23 - 313
Target Start/End: Original strand, 10852425 - 10852710
Alignment:
Q  23 ttgttgttgttatagtagaaaatccctctaaaggcatctagtcacatatccccttcatatgtctcccttattgttccttttttaagaataaaattgttca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10852425 ttgttgttgttatagtagaaaatccctctaaaggcatctagtcacatatccccttcatatgtctcccttattgttccttttttaagaataaaattattca 10852524  T
Q  123 aagttccacattggatgttatatggcccaaaattaggttttataagtgggagacatccctcacctctaagctagttttgtgggattgagtttggtacatc 222  Q
    || |||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10852525 aacttccacattggat-----atggcccaaaattaggttttataagtgggagacatccctcacctctaagctagttttgtgggattgagtttggtacatc 10852619  T
Q  223 ccaaattctaagatagttttagagcctattcaaaattcattgggcaaccttctggcgggccatccatatcatgtccaattgtaggcgtgag 313  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10852620 ccaaattctaagatagttttagagcctattcaaaatccattgggcaaccttctggcgggccatccatatcatgtccaattgtaggcgtgag 10852710  T

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