View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14704_low_11 (Length: 327)

Name: NF14704_low_11
Description: NF14704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14704_low_11
NF14704_low_11
[»] chr7 (65 HSPs)
chr7 (40-243)||(43113674-43113877)
chr7 (40-220)||(9392730-9392910)
chr7 (40-243)||(19217627-19217830)
chr7 (40-243)||(44417457-44417660)
chr7 (40-220)||(29187945-29188125)
chr7 (40-243)||(29186664-29186867)
chr7 (45-215)||(44230455-44230625)
chr7 (40-245)||(27072569-27072774)
chr7 (40-245)||(27205539-27205744)
chr7 (40-244)||(13750551-13750755)
chr7 (40-243)||(44420438-44420640)
chr7 (40-243)||(48793431-48793634)
chr7 (40-247)||(18787144-18787351)
chr7 (40-243)||(18788475-18788678)
chr7 (40-244)||(37237143-37237344)
chr7 (40-249)||(43962484-43962693)
chr7 (40-243)||(7011633-7011837)
chr7 (40-243)||(7026991-7027195)
chr7 (40-246)||(9391516-9391722)
chr7 (40-246)||(45399925-45400131)
chr7 (40-243)||(48792443-48792646)
chr7 (40-247)||(44746722-44746929)
chr7 (42-240)||(3537429-3537627)
chr7 (42-227)||(32519666-32519851)
chr7 (40-247)||(3538488-3538685)
chr7 (40-225)||(12630581-12630767)
chr7 (40-220)||(13597167-13597346)
chr7 (40-228)||(32518436-32518615)
chr7 (40-176)||(43961000-43961136)
chr7 (40-164)||(44748478-44748602)
chr7 (38-164)||(26005430-26005556)
chr7 (115-227)||(37235829-37235941)
chr7 (150-244)||(45688866-45688960)
chr7 (40-162)||(43115002-43115124)
chr7 (132-239)||(12630507-12630614)
chr7 (150-243)||(42611435-42611528)
chr7 (155-243)||(26006773-26006861)
chr7 (40-165)||(13599172-13599298)
chr7 (40-100)||(19218899-19218959)
chr7 (175-245)||(44231892-44231962)
chr7 (40-88)||(37235939-37235987)
chr7 (155-242)||(7057359-7057446)
chr7 (40-164)||(13749082-13749205)
chr7 (153-243)||(19008931-19009021)
chr7 (153-243)||(19016725-19016815)
chr7 (1-38)||(9357659-9357696)
chr7 (155-220)||(27071043-27071108)
chr7 (155-220)||(27207205-27207270)
chr7 (1-38)||(44231721-44231758)
chr7 (40-100)||(29409156-29409216)
chr7 (35-99)||(42520360-42520424)
chr7 (43-99)||(47536771-47536827)
chr7 (196-243)||(43960945-43960992)
chr7 (40-82)||(44231776-44231818)
chr7 (131-164)||(7057395-7057428)
chr7 (1-38)||(9392672-9392709)
chr7 (1-38)||(12630782-12630819)
chr7 (199-248)||(24653745-24653794)
chr7 (1-38)||(43114950-43114987)
chr7 (131-164)||(44231908-44231941)
chr7 (40-76)||(36395975-36396011)
chr7 (132-164)||(43960964-43960996)
chr7 (1-37)||(44746946-44746982)
chr7 (1-37)||(44747139-44747175)
chr7 (132-164)||(45688886-45688918)
[»] chr8 (30 HSPs)
chr8 (40-245)||(26364739-26364944)
chr8 (40-243)||(9244065-9244268)
chr8 (40-242)||(522012-522214)
chr8 (42-244)||(41638070-41638271)
chr8 (40-220)||(9245346-9245526)
chr8 (40-243)||(20308923-20309126)
chr8 (40-243)||(21095556-21095759)
chr8 (40-240)||(30644620-30644819)
chr8 (52-248)||(43584403-43584599)
chr8 (40-243)||(41636831-41637034)
chr8 (40-220)||(26366109-26366289)
chr8 (40-240)||(30640801-30641000)
chr8 (40-221)||(34642687-34642867)
chr8 (40-222)||(20309966-20310149)
chr8 (40-222)||(21096599-21096782)
chr8 (40-249)||(34643880-34644083)
chr8 (111-240)||(43585930-43586059)
chr8 (155-243)||(3714550-3714638)
chr8 (141-245)||(31202964-31203068)
chr8 (155-245)||(3713061-3713149)
chr8 (155-243)||(43134079-43134167)
chr8 (40-100)||(20066216-20066276)
chr8 (1-38)||(11080896-11080933)
chr8 (1-38)||(22012361-22012398)
chr8 (40-100)||(22012280-22012340)
chr8 (40-100)||(22013174-22013234)
chr8 (40-100)||(35462907-35462967)
chr8 (40-100)||(11080950-11081010)
chr8 (1-37)||(30644572-30644608)
chr8 (40-84)||(43133983-43134027)
[»] chr3 (67 HSPs)
chr3 (40-241)||(43393968-43394170)
chr3 (42-245)||(31938224-31938427)
chr3 (42-243)||(31937035-31937236)
chr3 (42-243)||(54354308-54354509)
chr3 (40-243)||(28777602-28777805)
chr3 (44-240)||(5691014-5691209)
chr3 (44-222)||(17742211-17742390)
chr3 (44-222)||(19043531-19043710)
chr3 (40-242)||(35759146-35759348)
chr3 (41-245)||(2233221-2233425)
chr3 (40-240)||(46902334-46902534)
chr3 (42-249)||(52525276-52525483)
chr3 (40-240)||(47431102-47431302)
chr3 (40-243)||(17116202-17116404)
chr3 (40-243)||(23073289-23073492)
chr3 (40-247)||(46903539-46903746)
chr3 (40-227)||(55209798-55209984)
chr3 (40-242)||(37609322-37609524)
chr3 (40-243)||(2232602-2232805)
chr3 (40-222)||(52521948-52522129)
chr3 (40-242)||(53180719-53180920)
chr3 (40-243)||(21727910-21728113)
chr3 (40-242)||(11346813-11347015)
chr3 (40-242)||(53765881-53766083)
chr3 (45-243)||(54353023-54353221)
chr3 (40-229)||(21729103-21729292)
chr3 (40-189)||(28776502-28776651)
chr3 (40-243)||(5689725-5689922)
chr3 (40-184)||(17740889-17741033)
chr3 (40-184)||(19042209-19042353)
chr3 (108-247)||(50881092-50881231)
chr3 (40-243)||(10979090-10979293)
chr3 (40-221)||(47917528-47917708)
chr3 (43-243)||(11348390-11348589)
chr3 (40-160)||(37610678-37610798)
chr3 (110-246)||(53178698-53178834)
chr3 (40-222)||(47429648-47429825)
chr3 (112-220)||(23091214-23091322)
chr3 (108-220)||(53764452-53764563)
chr3 (131-239)||(43392630-43392738)
chr3 (40-164)||(35758083-35758207)
chr3 (111-243)||(17117387-17117517)
chr3 (112-240)||(15290476-15290604)
chr3 (111-243)||(46986077-46986208)
chr3 (42-155)||(10978093-10978206)
chr3 (113-182)||(33113306-33113376)
chr3 (42-148)||(50879782-50879888)
chr3 (40-162)||(55210823-55210945)
chr3 (150-227)||(27749122-27749199)
chr3 (131-247)||(23072056-23072171)
chr3 (155-243)||(34014508-34014596)
chr3 (143-222)||(50879515-50879594)
chr3 (155-243)||(24376458-24376546)
chr3 (155-220)||(27750461-27750526)
chr3 (155-243)||(34015798-34015886)
chr3 (1-37)||(43392824-43392860)
chr3 (42-97)||(53764896-53764951)
chr3 (1-38)||(23072257-23072294)
chr3 (1-38)||(48337992-48338029)
chr3 (40-83)||(43392766-43392809)
chr3 (131-165)||(50879512-50879546)
chr3 (132-165)||(17742360-17742393)
chr3 (132-165)||(19043680-19043713)
chr3 (131-164)||(34014527-34014560)
chr3 (1-38)||(37610626-37610663)
chr3 (1-38)||(55210002-55210039)
chr3 (132-164)||(47429646-47429678)
[»] chr5 (28 HSPs)
chr5 (42-243)||(39350562-39350763)
chr5 (40-243)||(18654296-18654500)
chr5 (40-243)||(18655567-18655770)
chr5 (41-227)||(9081995-9082181)
chr5 (45-247)||(9083216-9083418)
chr5 (40-241)||(19228840-19229041)
chr5 (40-240)||(13278146-13278346)
chr5 (40-243)||(12372314-12372517)
chr5 (40-243)||(19229988-19230191)
chr5 (40-246)||(6803540-6803745)
chr5 (40-243)||(39349480-39349683)
chr5 (40-243)||(12373632-12373839)
chr5 (40-208)||(39164091-39164257)
chr5 (64-243)||(13276819-13276998)
chr5 (40-161)||(4031903-4032024)
chr5 (142-222)||(6801995-6802075)
chr5 (139-227)||(8447093-8447181)
chr5 (40-165)||(4032940-4033065)
chr5 (168-242)||(25001643-25001717)
chr5 (153-220)||(35952464-35952531)
chr5 (193-247)||(4031877-4031931)
chr5 (41-83)||(25001781-25001823)
chr5 (131-164)||(8447096-8447129)
chr5 (1-38)||(14357746-14357783)
chr5 (1-34)||(18654518-18654551)
chr5 (1-38)||(30673535-30673572)
chr5 (1-38)||(30915982-30916019)
chr5 (1-37)||(12372532-12372568)
[»] chr1 (33 HSPs)
chr1 (42-227)||(50484913-50485098)
chr1 (40-246)||(5488782-5488988)
chr1 (40-243)||(51693147-51693350)
chr1 (40-227)||(7111390-7111577)
chr1 (40-247)||(51468335-51468542)
chr1 (40-243)||(52759363-52759566)
chr1 (40-243)||(7110226-7110429)
chr1 (40-227)||(17244191-17244378)
chr1 (42-242)||(5488502-5488702)
chr1 (45-243)||(18819262-18819460)
chr1 (40-221)||(52087689-52087870)
chr1 (40-240)||(45229518-45229718)
chr1 (45-243)||(40187603-40187800)
chr1 (42-243)||(52086627-52086826)
chr1 (40-243)||(51468816-51469019)
chr1 (40-227)||(45228291-45228478)
chr1 (40-162)||(52761511-52761633)
chr1 (40-227)||(38235065-38235251)
chr1 (44-243)||(1823215-1823410)
chr1 (111-243)||(17245651-17245782)
chr1 (40-221)||(47533769-47533950)
chr1 (40-243)||(50483511-50483713)
chr1 (40-229)||(1821922-1822112)
chr1 (148-247)||(25181497-25181596)
chr1 (112-227)||(47532973-47533088)
chr1 (40-130)||(21203124-21203214)
chr1 (1-38)||(18820632-18820669)
chr1 (196-243)||(52761607-52761654)
chr1 (175-227)||(18820806-18820858)
chr1 (40-83)||(49619736-49619779)
chr1 (1-39)||(1822129-1822167)
chr1 (131-164)||(25181520-25181553)
chr1 (132-164)||(18820823-18820855)
[»] scaffold0141 (2 HSPs)
scaffold0141 (42-247)||(35202-35407)
scaffold0141 (42-243)||(31033-31234)
[»] scaffold0049 (2 HSPs)
scaffold0049 (42-247)||(79405-79610)
scaffold0049 (42-243)||(83578-83779)
[»] chr6 (24 HSPs)
chr6 (40-256)||(34996676-34996892)
chr6 (40-243)||(32348952-32349155)
chr6 (40-219)||(32713798-32713977)
chr6 (40-244)||(3000708-3000912)
chr6 (40-243)||(11801257-11801460)
chr6 (40-244)||(34995351-34995554)
chr6 (40-243)||(32347808-32348011)
chr6 (40-243)||(18572885-18573087)
chr6 (40-240)||(32712358-32712558)
chr6 (45-243)||(29479122-29479312)
chr6 (40-240)||(19383070-19383262)
chr6 (131-248)||(18574299-18574416)
chr6 (40-133)||(27719846-27719938)
chr6 (40-142)||(21094506-21094608)
chr6 (40-94)||(21095294-21095348)
chr6 (175-245)||(29477757-29477827)
chr6 (1-38)||(29477964-29478001)
chr6 (42-99)||(7628469-7628526)
chr6 (1-38)||(18574176-18574213)
chr6 (1-37)||(682480-682516)
chr6 (1-38)||(32712570-32712607)
chr6 (40-76)||(13562214-13562250)
chr6 (132-164)||(29477778-29477810)
chr6 (1-37)||(34995569-34995605)
[»] chr2 (21 HSPs)
chr2 (40-244)||(16602724-16602928)
chr2 (40-243)||(27892251-27892454)
chr2 (40-243)||(38243870-38244073)
chr2 (45-244)||(23832967-23833165)
chr2 (40-243)||(27891106-27891309)
chr2 (65-241)||(26388220-26388396)
chr2 (139-245)||(43814519-43814625)
chr2 (131-227)||(16604195-16604291)
chr2 (40-182)||(38242944-38243083)
chr2 (153-243)||(23833898-23833988)
chr2 (155-243)||(5034846-5034934)
chr2 (42-132)||(44800983-44801073)
chr2 (1-38)||(16604072-16604109)
chr2 (155-245)||(5033476-5033566)
chr2 (40-100)||(5034750-5034810)
chr2 (258-309)||(29505053-29505104)
chr2 (158-227)||(19577359-19577428)
chr2 (1-38)||(26388422-26388459)
chr2 (40-100)||(5033602-5033662)
chr2 (40-100)||(12365936-12365996)
chr2 (1-37)||(27892200-27892236)
[»] chr4 (41 HSPs)
chr4 (40-243)||(22621867-22622070)
chr4 (40-245)||(38032335-38032540)
chr4 (40-243)||(8815272-8815475)
chr4 (40-222)||(34095574-34095756)
chr4 (46-243)||(17356361-17356558)
chr4 (40-243)||(18091580-18091783)
chr4 (40-227)||(7261458-7261645)
chr4 (40-244)||(10802888-10803092)
chr4 (42-222)||(48499385-48499565)
chr4 (40-243)||(38031168-38031371)
chr4 (40-212)||(22623058-22623230)
chr4 (40-243)||(8814135-8814337)
chr4 (40-242)||(23757885-23758088)
chr4 (53-243)||(35191817-35192007)
chr4 (40-240)||(17357778-17357978)
chr4 (40-243)||(10804110-10804313)
chr4 (40-239)||(48501239-48501437)
chr4 (69-222)||(35193140-35193293)
chr4 (108-228)||(56233739-56233859)
chr4 (40-243)||(56234936-56235138)
chr4 (40-220)||(5433322-5433502)
chr4 (139-243)||(48080270-48080374)
chr4 (132-240)||(48081597-48081705)
chr4 (150-243)||(34122827-34122920)
chr4 (147-222)||(48081552-48081627)
chr4 (155-243)||(34121299-34121387)
chr4 (155-243)||(48463014-48463102)
chr4 (40-222)||(36074709-36074891)
chr4 (40-142)||(35927031-35927133)
chr4 (40-99)||(35925835-35925894)
chr4 (1-38)||(37642401-37642438)
chr4 (40-100)||(48081295-48081355)
chr4 (1-35)||(17356579-17356613)
chr4 (40-94)||(48081482-48081536)
chr4 (199-248)||(5574195-5574244)
chr4 (1-38)||(8815214-8815251)
chr4 (131-164)||(34122868-34122901)
chr4 (1-37)||(22622082-22622118)
chr4 (1-37)||(35192034-35192070)
chr4 (132-164)||(48463051-48463083)
chr4 (40-100)||(54372884-54372944)
[»] scaffold1425 (2 HSPs)
scaffold1425 (42-243)||(1518-1719)
scaffold1425 (42-243)||(134-335)
[»] scaffold0878 (3 HSPs)
scaffold0878 (40-243)||(2941-3145)
scaffold0878 (40-164)||(1848-1971)
scaffold0878 (1-37)||(2888-2924)
[»] scaffold0018 (1 HSPs)
scaffold0018 (40-244)||(25259-25464)
[»] scaffold0026 (4 HSPs)
scaffold0026 (139-248)||(104296-104405)
scaffold0026 (40-89)||(104405-104454)
scaffold0026 (131-164)||(104320-104353)
scaffold0026 (1-38)||(104469-104506)
[»] scaffold0349 (1 HSPs)
scaffold0349 (40-133)||(9268-9360)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-38)||(98252-98289)
[»] scaffold0081 (1 HSPs)
scaffold0081 (40-82)||(42925-42967)
[»] scaffold0035 (1 HSPs)
scaffold0035 (131-164)||(21155-21188)
[»] scaffold0065 (1 HSPs)
scaffold0065 (40-100)||(35500-35560)


Alignment Details
Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 43113877 - 43113674
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  43113877 ataaattaggtgctggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 43113778  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||||||||||||||||| ||||||  ||||||||    
T  43113777 tgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccgacagatcaatta 43113678  T
Q  240 agcc 243  Q
    ||||    
T  43113677 agcc 43113674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 40 - 220
Target Start/End: Original strand, 9392730 - 9392910
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  9392730 ataaattaggtgccggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttctaggggattaaaattatcaaaattggaccaaat 9392829  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||   | ||||||||||||||||||||||||||    
T  9392830 tgaataaaagaaataagttaagggacatgtttgagaaagttaagacttataggaataaattaaataaaagaaataagttaa 9392910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 19217830 - 19217627
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||       |||| ||||||||||||||||||| ||||| |    
T  19217830 ataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatcaaaattgtaccaaat 19217731  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||  || ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  19217730 tgaataaaagaaataagttaatggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 19217631  T
Q  240 agcc 243  Q
    ||||    
T  19217630 agcc 19217627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 44417660 - 44417457
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||  ||||       |||||||||||||||||||||||||||||| |    
T  44417660 ataaattaggtgttggtgatagactataaaatctgatagacctccgtaatccaacaatctctttttttaggggattaaaattatcaaaattggaccaaat 44417561  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||| |||| ||||||||||||||| ||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  44417560 tgaagaaaataaataagttaagggacgtgtttgagaatgttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 44417461  T
Q  240 agcc 243  Q
    ||||    
T  44417460 agcc 44417457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 220
Target Start/End: Original strand, 29187945 - 29188125
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||| || |    
T  29187945 ataaattaggtgttggtgatgcactataaaatctgatagacctctgcaatccaacggtctctttttttaggggattaaaattatcaaaattggactaaat 29188044  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||||||  || ||||| |||||||||||||||||||    
T  29188045 tgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaa 29188125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 29186867 - 29186664
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||       | |||||||||||||||||||||| ||||| |    
T  29186867 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaaaattgaaccaaat 29186768  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| |||||||  || ||||| ||||||||||||||||||||| |||  |  ||||||||    
T  29186767 tgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaatta 29186668  T
Q  240 agcc 243  Q
    ||||    
T  29186667 agcc 29186664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 44230625 - 44230455
Alignment:
Q  45 ttaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaat 144  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||| ||||||||||||| ||||||    
T  44230625 ttaggtgttgatgatacactgtaaaatctgatagacctctgtaatccaacggtctcttttcgtaggggattgaaattattaaaattggaccaaattgaat 44230526  T
Q  145 aaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataa 215  Q
    |||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  44230525 aaaagaaataagttaaaggacgtgattgagaaagttaaaacttatggaactaaattgaataaaagaaataa 44230455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 40 - 245
Target Start/End: Original strand, 27072569 - 27072774
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |        || |||||||||||||||||||| |||||| |    
T  27072569 ataaattaggtgttggtgataaactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttgaccaaat 27072668  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||  |  ||||| |||||||||||||| |||||| ||||||  ||||||||    
T  27072669 tgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 27072768  T
Q  240 agccaa 245  Q
    ||||||    
T  27072769 agccaa 27072774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 27205744 - 27205539
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |        || |||||||||||||||||||| |||||| |    
T  27205744 ataaattaggtgttggtgatagactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttgaccaaat 27205645  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||  |  ||||| |||||||||||||| |||||| ||||||  ||||||||    
T  27205644 tgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 27205545  T
Q  240 agccaa 245  Q
    ||||||    
T  27205544 agccaa 27205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 13750551 - 13750755
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| || || ||||||||| |||||||| ||||||||  |||||||||||||||        |||||||||||||||||||||||||||||| |    
T  13750551 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacggtctgtttttttaggggattaaaattatcaaaattggaccaaat 13750650  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||  |  ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  13750651 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgtgatcaaattgaataaaagaaataagttaagggaccggcagatcaatta 13750750  T
Q  240 agcca 244  Q
    |||||    
T  13750751 agcca 13750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 44420438 - 44420640
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||  ||||||||||||| ||       |||| |||||||||||||||||||||| || |    
T  44420438 ataaattagatgttggtgatacactataaa-tctgatagaccttcgtaatccaacggtatctttttttagggcattaaaattatcaaaattggactaaat 44420536  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| | | || | |||||||||    
T  44420537 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaaggatcggcatatcaatta 44420636  T
Q  240 agcc 243  Q
    ||||    
T  44420637 agcc 44420640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 48793431 - 48793634
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||||||||||||||| |||||||| ||| |||| |||||||||||||||||       ||| |||||||||||||||||||||| ||| |    
T  48793431 ataaatttggtgttggtgatacactataaaatcttatacacctttgtaatccaacggtctctttttttaggagattaaaattatcaaaattggatcaaat 48793530  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||  || ||| | ||||||||||||||||||||| |||| |  ||||||||    
T  48793531 tgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaaataagttaagggaccggcaaatcaatta 48793630  T
Q  240 agcc 243  Q
    ||||    
T  48793631 agcc 48793634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 247
Target Start/End: Complemental strand, 18787351 - 18787144
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||| |||||||||||||||  |||||||||||| ||||| |||||||||||||||        |||||||||||||||||||||||||||||| |    
T  18787351 ataaattaagtgttggtgatacaccataaaatctgataaacctccgtaatccaacggtctatttttttaggggattaaaattatcaaaattggaccaaat 18787252  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||||  | ||||| |||||||||| |||||  || |||||||| ||||||||||| |||||| ||||||  ||||||||    
T  18787251 tgaataaaagaaataagttaagggacatatttgaaaaagttaagatttatgggaccaaattaaacaaaagaaataaattaagggaccgacagatcaatta 18787152  T
Q  240 agccaaaa 247  Q
    ||| ||||    
T  18787151 agctaaaa 18787144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 18788475 - 18788678
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||| | |||||||||||||||||  |||||||||||||||        || ||||||||||||||||||||||||||| |    
T  18788475 ataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaacggtctatttttttagaggattaaaattatcaaaattggaccaaat 18788574  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||   || | ||| |||||||||||||| |||||| |||| | |||||||||    
T  18788575 tgaataaaagaaataagttaagggacatgtttgagaaagttaagatttataggaccatattgaataaaagaaataaattaagggaccggcatatcaatta 18788674  T
Q  240 agcc 243  Q
    ||||    
T  18788675 agcc 18788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 37237143 - 37237344
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||       || ||||| ||||||||||||||||||||| |    
T  37237143 ataaattaggtgttggtcatacactataaaatctgatagacctccgtaatccaacgatctctttttttagaggatt-aaattatcaaaattggaccaaat 37237241  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    | ||||||  |||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||| || | |  ||||||||    
T  37237242 ttaataaa--aaataagttaagggatgtgtttgagagagttaagacttatgagaccaaattaaataaaagaaataaattaagggacgggcagatcaatta 37237339  T
Q  240 agcca 244  Q
    |||||    
T  37237340 agcca 37237344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 40 - 249
Target Start/End: Original strand, 43962484 - 43962693
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||| |||||| ||| |||||||||||||||||  |||||||||||||||        ||  |||||||||||||||||||||| ||| |    
T  43962484 ataaattaggtgttagtgatatactataaaatctgatagaccttcgtaatccaacggtctgtttttttagatgattaaaattatcaaaattggatcaaat 43962583  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||  || ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  43962584 tgaataaaagaaataagttaagggacatgtttgagaaagctaagacttatgtgaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 43962683  T
Q  240 agccaaaatt 249  Q
    |||| |||||    
T  43962684 agcctaaatt 43962693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 7011837 - 7011633
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnn-aggggattaaaattatcaaaattggaccaat 138  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||         |  |||||||||||||||||||||||||||     
T  7011837 ataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattggaccaaa 7011738  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    |||||||||||||||||| |||||||  ||||||| ||||||||||||||||| |  ||||| ||||||||||||||||||||| || |||  |||||||    
T  7011737 ttgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacagatcaatt 7011638  T
Q  239 aagcc 243  Q
    |||||    
T  7011637 aagcc 7011633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 7027195 - 7026991
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnn-aggggattaaaattatcaaaattggaccaat 138  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||         |  |||||||||||||||||||||||||||     
T  7027195 ataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattggaccaaa 7027096  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    |||||||||||||||||| |||||||  ||||||| ||||||||||||||||| |  ||||| ||||||||||||||||||||| || |||  |||||||    
T  7027095 ttgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacagatcaatt 7026996  T
Q  239 aagcc 243  Q
    |||||    
T  7026995 aagcc 7026991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 246
Target Start/End: Complemental strand, 9391722 - 9391516
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||  ||||||||||||||||       |  ||||||||||||||||||||| ||||| |    
T  9391722 ataaatttggtgttgatgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaaaggattaaaattatcaaaattgtaccaaat 9391623  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||| |||||| |||||||||||| |||||| ||||   || ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  9391622 tgaataaaagaaataagtgaagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 9391523  T
Q  240 agccaaa 246  Q
    |||||||    
T  9391522 agccaaa 9391516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 246
Target Start/End: Original strand, 45399925 - 45400131
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||       ||||||||||||||||||||||||||||||      
T  45399925 ataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaag 45400024  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    | ||||||||||||||||||||||| |||||||  |||||||||| |||||| || |||| |||  ||| ||||||||||||| |||| |  ||||||||    
T  45400025 taaataaaagaaataagttaagggacgtgtttgcaaaagttaagagttatgagaccaaatcaaaataaacaaataagttaagggaccggcagatcaatta 45400124  T
Q  240 agccaaa 246  Q
    | |||||    
T  45400125 aaccaaa 45400131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 48792646 - 48792443
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||||||||||||||| |||||||| ||| |||  |||||||||||||||||       ||| ||||||||||||||||||| || ||| |    
T  48792646 ataaatttggtgttggtgatacactataaaatcttatacacccttgtaatccaacggtctctttttttaggagattaaaattatcaaaattagatcaaat 48792547  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||||  ||||||| |||||||| |||||||  || ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  48792546 tgaataaaagaaataagttaagggacatgtttgaaaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 48792447  T
Q  240 agcc 243  Q
    ||||    
T  48792446 agcc 48792443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 40 - 247
Target Start/End: Complemental strand, 44746929 - 44746722
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| | ||||||| |||||| ||||||||||| ||||||||||||||||       | ||||||||||||||||||||| |||||| |    
T  44746929 ataaattaggtgttgataatacactataaaatatgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaatttgaccaaat 44746830  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||| | |  ||||||||||| ||||||||||| | |  ||||| ||||||| ||||||||||||  ||||||  ||||||||    
T  44746829 tgaataaaagaaataagttaacgaacatgtttgagaaaattaagacttataagatcaaattgaataaaaaaaataagttaagagaccgacagatcaatta 44746730  T
Q  240 agccaaaa 247  Q
    | ||||||    
T  44746729 aaccaaaa 44746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 3537627 - 3537429
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    |||||||||| |||||||| ||| |||||| | ||||||||  ||||||||||||| ||       |||||||||||||||| |||||| ||| || |||    
T  3537627 aaattaggtgatggtgatatactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaaattagactaaattg 3537528  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaa 240  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||  || ||||| ||||||||||||||||||||| |||| |  |||||||||    
T  3537527 aataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaa 3537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 32519666 - 32519851
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||||| ||||| || |||||| |||||||  ||||| ||||||||||       | |||||||||||||| ||||||| ||||| |||    
T  32519666 aaattaggtgttggtgacacactatacaatctggtagaccttcgtaattcaacggtctctttttttaagggattaaaattattaaaattgaaccaaattg 32519765  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||  || ||||| |||||||||||||| |||||| ||||    
T  32519766 aataaaagaaataatttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccg 32519851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 40 - 247
Target Start/End: Original strand, 3538488 - 3538685
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| |||||||||||||| ||||||| ||||||| ||| ||||||||||||||||       |||||| |||||||||||||||||            
T  3538488 ataaattagatgttggtgatacaccgtaaaatttgatagatctccgtaatccaacggtctctttttttaggggactaaaattatcaaaattg-------- 3538579  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
      |||||||||||||||| ||  || |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||| || ||||||||    
T  3538580 --aataaaagaaataagtgaaaagacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcggatcaatta 3538677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 12630767 - 12630581
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||| ||||| ||   |||||||||||| |||||||||||||||| |||||       ||||||||||||||||||||||| |||||| |    
T  12630767 ataaattaggtgttagtgatccataataaaatctgatatacctctgtaatccaacagtctctttttctaggggattaaaattatcaaaattagaccaaat 12630668  T
Q  140 tgaataaaagaaataag-ttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaac 225  Q
    ||||||||| ||| ||| |||||||| |||||||||||| ||||||||| ||| || ||||| || |||||| ||||||||||||||    
T  12630667 tgaataaaaaaaaaaaggttaagggacgtgtttgagaaaattaagacttttgagaccaaattgaagaaaagacataagttaaggaac 12630581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 13597346 - 13597167
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||| |||||||||  |||||||||| | ||       || |||||||||||||||||||||  | ||||    
T  13597346 ataaattaggtgttggtgatacactataaaatcttatagacctccctaatccaacgatatctttttttagaggattaaaattatcaaaattgatcaaatt 13597247  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    | ||||||||||||||||| ||||| ||||||||||||||||||||||||   || ||||| ||||||||||||| |||||    
T  13597246 t-aataaaagaaataagttcagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaatacgttaa 13597167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 228
Target Start/End: Complemental strand, 32518615 - 32518436
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||        ||||||||||||||         | ||||| |    
T  32518615 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaatt---------gaaccaaat 32518525  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccga 228  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| |||||  || ||||| |||||||||||||| |||||| |||||    
T  32518524 tgaataaaagaaataatttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccga 32518436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 176
Target Start/End: Complemental strand, 43961136 - 43961000
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||        || ||||||||||||||||||||||| ||| |    
T  43961136 ataaattaggtgttagtgatacactataaaatctgatagacctttgtaatccaacggtctgtttttgtagaggattaaaattatcaaaattggatcaaat 43961037  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaa 176  Q
    |||||||||||||||| |||||||| |||||||||||    
T  43961036 tgaataaaagaaataaattaagggacgtgtttgagaa 43961000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 44748478 - 44748602
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||  |||||||||| |||||       |||||||||||||||||||||||||||||  |    
T  44748478 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacagtctccttttctaggggattaaaattatcaaaattggaccatat 44748577  T
Q  140 tgaataaaagaaataagttaaggga 164  Q
    |||||||||||||||| ||||||||    
T  44748578 tgaataaaagaaataaattaaggga 44748602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 38 - 164
Target Start/End: Complemental strand, 26005556 - 26005430
Alignment:
Q  38 acataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaa 137  Q
    |||||||||| |||||||||||||||| |||||||| |||||||| |||||||||||||||||       || ||| ||||||||||||||||| |||||    
T  26005556 acataaattacgtgttggtgatacactataaaatcttatagacctttgtaatccaacggtctctttttttagtggagtaaaattatcaaaattgaaccaa 26005457  T
Q  138 tttgaataaaagaaataagttaaggga 164  Q
     ||||||||||||||||||||||||||    
T  26005456 attgaataaaagaaataagttaaggga 26005430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 37235941 - 37235829
Alignment:
Q  115 taaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaata 214  Q
    ||||||| ||||||||||||||| |||||| ||||||||||||||||||| | |||||||||||||  || ||||| ||| |||||||||||||||||||    
T  37235941 taaaattctcaaaattggaccaaattgaatcaaagaaataagttaagggacgcgtttgagaaagttgggatttatggaaccaaattaaataaaagaaata 37235842  T
Q  215 agttaaggaaccg 227  Q
    |||||||| ||||    
T  37235841 agttaagggaccg 37235829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 45688960 - 45688866
Alignment:
Q  150 aaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcca 244  Q
    |||| ||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||||||||||||| ||||||  |||||||||||||    
T  45688960 aaatgagttaagggatgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcca 45688866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 43115002 - 43115124
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||  || |||| |||| ||||||||||||||| || |||||||||||||||        | |||||||||||||||||||||||| ||| |    
T  43115002 ataaattaggttatgatgatgcactataaaatctgatagacttcagtaatccaacggtcttcttttttaagggattaaaattatcaaaattggatcaaat 43115101  T
Q  140 tgaataaaagaaataagttaagg 162  Q
    |||||||||||||||||||||||    
T  43115102 tgaataaaagaaataagttaagg 43115124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 12630614 - 12630507
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgt 231  Q
    |||||| ||||| |||||| ||||||||||| |  ||||||||||||||||||||||||| || ||||| ||||||||| ||||||||| | |||||| |    
T  12630614 gaccaaattgaagaaaagacataagttaaggaacatgtttgagaaagttaagacttatgagaccaaattgaataaaagacataagttaaaggaccgacat 12630515  T
Q  232 atcaatta 239  Q
    ||||||||    
T  12630514 atcaatta 12630507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 42611528 - 42611435
Alignment:
Q  150 aaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||| ||||||||  |||||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||| | |||| |  ||||||||||||    
T  42611528 aaatgagttaaggagtgtgtttgagaaagttaaaacttatggaaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 42611435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 26006773 - 26006861
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||||||||| || |||||| |||||||  || ||||| || |||||||||||||||||| ||||||  ||||||||||||    
T  26006773 agttaagggatgtgtttgtgatagttaaaacttatgggaccaaattgaacaaaagaaataagttaagggaccgacagatcaattaagcc 26006861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 13599172 - 13599298
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnn-aggggattaaaattatcaaaattggaccaat 138  Q
    ||||||||||||||  ||||||||| |||||||||||||||||| ||||||||||  | |         | |  ||||||||||||||||||||| |||     
T  13599172 ataaattaggtgttactgatacactataaaatctgatagacctccgtaatccaacaattttttttttttaagatattaaaattatcaaaattggagcaaa 13599271  T
Q  139 ttgaataaaagaaataagttaagggat 165  Q
    |||||||||||||||||||||| ||||    
T  13599272 ttgaataaaagaaataagttaaaggat 13599298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 19218899 - 19218959
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    ||||||||||||||||||||||||||| |||||| || ||||||| | |||||||||||||    
T  19218899 ataaattaggtgttggtgatacactgttaaatctcatggacctcttttatccaacggtctc 19218959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 44231892 - 44231962
Alignment:
Q  175 aaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagccaa 245  Q
    |||||||||| |||||  || ||||| ||||||||||||||||||||| ||||||  ||||||||||||||    
T  44231892 aaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagccaa 44231962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 37235987 - 37235939
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaa 88  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  37235987 ataaattaggtgttggtgatacattgtaaaatctgattgacctccgtaa 37235939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 7057359 - 7057446
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagc 242  Q
    |||| ||||||||||||| ||  ||||| |||||||  || ||||| ||||||||||||||||||||| |||| |  |||||||||||    
T  7057359 agttgagggatgtgtttgtgacggttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 7057446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 13749205 - 13749082
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||||||||  ||| | | ||||||||  ||||| ||||||||||       || ||||||||||||||||||||  | ||| |    
T  13749205 ataaattaggtgttggtgatacactagaaatttt-atagacctacgtaattcaacggtctcattttttagaggattaaaattatcaaaattaaatcaaat 13749107  T
Q  140 tgaataaaagaaataagttaaggga 164  Q
    | |||| ||||||||||||| ||||    
T  13749106 taaatataagaaataagttatggga 13749082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 19009021 - 19008931
Alignment:
Q  153 taagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||| | | |||| ||| |||| |||||||  || ||||| || |||||||||||||||||| ||||||  ||||||||||||    
T  19009021 taagttaagggacgcgattgacaaatttaatacttatgggaccaaattgaaaaaaagaaataagttaagggaccgacagatcaattaagcc 19008931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 19016725 - 19016815
Alignment:
Q  153 taagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||| ||| |||| ||| |||| |||||||  || ||||| || ||||||||||| |||||| ||||||  ||||||||||||    
T  19016725 taagttaagggacgtggttgacaaatttaatacttatgggaccaaattgaaaaaaagaaataaattaagggaccgacagatcaattaagcc 19016815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9357696 - 9357659
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  9357696 ttctttcctcatcttcatcttcattcaaccttcatcaa 9357659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 27071108 - 27071043
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    |||||||||||||||||| ||  ||||| |||||||  || ||||| |||||||||||||||||||    
T  27071108 agttaagggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaa 27071043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 27207205 - 27207270
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    |||||||||||||||||| ||  ||||| |||||||  || ||||| |||||||||||||||||||    
T  27207205 agttaagggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaa 27207270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44231758 - 44231721
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  44231758 ttcttccctcatcttcatcttcattcaaccttcgtcaa 44231721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 29409156 - 29409216
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    ||||||||||||||||| ||||||||| | |||||||||| |||  | |||||||||||||    
T  29409156 ataaattaggtgttggttatacactgttagatctgatagatctcatttatccaacggtctc 29409216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 42520424 - 42520360
Alignment:
Q  35 tcaacataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtct 99  Q
    |||| |||||||| ||||||||||||||| || | ||||||||||||||  | ||||||||||||    
T  42520424 tcaatataaattatgtgttggtgatacaccgttagatctgatagacctcctttatccaacggtct 42520360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 47536771 - 47536827
Alignment:
Q  43 aattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtct 99  Q
    |||||||||||||||||||||  | | ||||||||||||||| | ||||||||||||    
T  47536771 aattaggtgttggtgatacaccattagatctgatagacctcttttatccaacggtct 47536827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 43960992 - 43960945
Alignment:
Q  196 aaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||| ||||||||||||||||||||| ||||||  ||||||||||||    
T  43960992 aaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 43960945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 44231776 - 44231818
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacct 82  Q
    |||||| |||||||||||||||||| ||||||||| |||||||    
T  44231776 ataaatcaggtgttggtgatacactataaaatctggtagacct 44231818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 7057395 - 7057428
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaaggga 164  Q
    ||||||| ||||||||||||||||||||||||||    
T  7057395 ggaccaaattgaataaaagaaataagttaaggga 7057428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9392709 - 9392672
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  9392709 ttcttccctcatcttcatctacattcatccttcatcaa 9392672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12630782 - 12630819
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  12630782 ttcttccctcatcttcatctacattcatccttcatcaa 12630819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 24653745 - 24653794
Alignment:
Q  199 ttaaataaaagaaataagttaaggaaccgacgtatcaattaagccaaaat 248  Q
    ||||||||||||| |||||||||| ||||  | |||||||||||||||||    
T  24653745 ttaaataaaagaattaagttaagggaccggaggatcaattaagccaaaat 24653794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 43114987 - 43114950
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  43114987 ttcttccctcatcttcattttcattcatccttcatcaa 43114950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 44231908 - 44231941
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaaggga 164  Q
    ||||||| ||||||||||||||||||||||||||    
T  44231908 ggaccaaattgaataaaagaaataagttaaggga 44231941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 36396011 - 36395975
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgat 76  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  36396011 ataaattagatgttggtgatacactgttaaatctgat 36395975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 43960996 - 43960964
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaaggga 164  Q
    |||||| ||||||||||||||||||||||||||    
T  43960996 gaccaaattgaataaaagaaataagttaaggga 43960964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44746946 - 44746982
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  44746946 ttcttccctcatctccatcttcatacaaccttcatca 44746982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44747139 - 44747175
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  44747139 ttcttccctcatctccatcttcatacaaccttcatca 44747175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 45688918 - 45688886
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaaggga 164  Q
    |||||| ||||||||||||||||||||||||||    
T  45688918 gaccaaattgaataaaagaaataagttaaggga 45688886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 26364944 - 26364739
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||| ||| |    
T  26364944 ataaattaggtgttggtgatacattataaaatctgatagacctctgtaatccaacggtctctttttttagaggattaaaattatcaaaattggatcaaat 26364845  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  26364844 tgaataaaagaaataagttaaaggatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 26364745  T
Q  240 agccaa 245  Q
    ||||||    
T  26364744 agccaa 26364739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 9244268 - 9244065
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||       | |||||||||||||||||||||| ||||| |    
T  9244268 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaaaattgaaccaaat 9244169  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| |||||||  || ||||| ||||||||||||||||||||| |||  |  ||||||||    
T  9244168 tgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaatta 9244069  T
Q  240 agcc 243  Q
    ||||    
T  9244068 agcc 9244065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 522012 - 522214
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||| |||||||||||||| |||||| ||||||||||| |||||||||| |||||       ||||||||||||||||||||||| || ||| |    
T  522012 ataaattaggggttggtgatacactataaaatttgatagacctccgtaatccaacagtctctttttctaggggattaaaattatcaaaattagatcaaat 522111  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||  || |||||    
T  522112 tgaataaaataaataagttaagggacatgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccgacagattaatta 522211  T
Q  240 agc 242  Q
    |||    
T  522212 agc 522214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 42 - 244
Target Start/End: Original strand, 41638070 - 41638271
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||||  |||||       |||||||||||||||| ||||||||||||| |||    
T  41638070 aaattaggtgttggtgatacactataaaacatgatagacctctgtaatccaattgtctctttttt-aggggattaaaattattaaaattggaccaaattg 41638168  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  41638169 aataaaagaaataagttaaaggacatgtttgagaaagttaagacttatgagaataaattgaataaaagaaataagttaagggaccggcagatcaattaag 41638268  T
Q  242 cca 244  Q
    |||    
T  41638269 cca 41638271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 220
Target Start/End: Original strand, 9245346 - 9245526
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||       |||||||||||||||| |||||||||| || |    
T  9245346 ataaattaggtgttggtgatacactataaaatctgatagacctcagcaatccaacggtctctttttttaggggattaaaattataaaaattggactaaat 9245445  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||||||  || ||||| |||||||||||||||||||    
T  9245446 tgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaa 9245526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 20309126 - 20308923
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| || |||||||||||||       ||||||| |||||||||||||||||||||| |    
T  20309126 ataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaaaattggaccaaat 20309027  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||  ||||| |||||||| ||||||||||||||||| |||||||  ||| |||| ||||||||||||||||||||| |||| |  ||||||||    
T  20309026 tgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccggcagatcaatta 20308927  T
Q  240 agcc 243  Q
    ||||    
T  20308926 agcc 20308923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 21095759 - 21095556
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| || |||||||||||||       ||||||| |||||||||||||||||||||| |    
T  21095759 ataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaaaattggaccaaat 21095660  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||  ||||| |||||||| ||||||||||||||||| |||||||  ||| |||| ||||||||||||||||||||| |||| |  ||||||||    
T  21095659 tgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccggcagatcaatta 21095560  T
Q  240 agcc 243  Q
    ||||    
T  21095559 agcc 21095556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 30644620 - 30644819
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||| || | |||||| ||||||||||| ||||||||||||||||       || ||||||||||||||||||||||| ||| |    
T  30644620 ataaattaggtgttggtgatccattataaaatttgatagacctccgtaatccaacggtctctttttt-agaggattaaaattatcaaaattggatcaaat 30644718  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||  || |||||||||||||||||||| |||||||||||||  ||||||||    
T  30644719 tgaataaaagaaataagttaagagacgtgtttgagaaagttaagatttatgggaccaaattaaataaaagaaataaattaaggaaccgacagatcaatta 30644818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 52 - 248
Target Start/End: Complemental strand, 43584599 - 43584403
Alignment:
Q  52 ttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaataaaagaa 151  Q
    ||||||||||| | ||||||||||||||| | |||||||||||||||||       |   |||||||||||||||||||||| ||| |||||||||||||    
T  43584599 ttggtgatacattataaaatctgatagacttttgtaatccaacggtctctttttttaaaagattaaaattatcaaaattggatcaaattgaataaaagaa 43584500  T
Q  152 ataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagccaaaat 248  Q
    ||||||||||||| |||||||||||||||||||||||||| |  ||||| ||||||||||||||||||| | ||||||  |||||||||||| ||||    
T  43584499 ataagttaagggacgtgtttgagaaagttaagacttatgagatcaaattgaataaaagaaataagttaatggaccgacagatcaattaagcctaaat 43584403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 41637034 - 41636831
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||  ||||||||||||||| || ||||||||||||||||       |||||||||||||||| ||| ||||||||| |    
T  41637034 ataaattaggtgttggtgatacacgataaaatctgatagacttccgtaatccaacggtctctttttttaggggattaaaattataaaagttggaccaaat 41636935  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||| |||||||| |||||| ||||||||||||||||||  || ||||| ||| |||||||||||| || | |||| |  ||||||||    
T  41636934 tgaataaaagaaataaattaagggacgtgttttagaaagttaagacttatgggaccaaattgaatgaaagaaataagtaaaaggaccggcaaatcaatta 41636835  T
Q  240 agcc 243  Q
    ||||    
T  41636834 agcc 41636831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 220
Target Start/End: Original strand, 26366109 - 26366289
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||| |||||||||||||||| |||||||| ||||||||| |||||| ||||||||        |||||||||||||||| |||| |||||||| |    
T  26366109 ataaattatgtgttggtgatacactataaaatctaatagacctccgtaatctaacggtctttttttttaggggattaaaattattaaaaatggaccaaat 26366208  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    |||||||||||||||||||| || |  ||||||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  26366209 tgaataaaagaaataagttatggaacatgtttgataaggttaagacttatgaaaccaaattaaataaaagaaataagttaa 26366289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 30641000 - 30640801
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||       |||||||||||||||| ||||||||| ||| |    
T  30641000 ataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattattaaaattggatcaaat 30640901  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||  || |||||||| || ||||| |||||||  || ||||| ||||||||||||||||||| | |||| | |||||||||    
T  30640900 tgaataaaagaaataagttaa-tgacgtgtttgataaggttaaaacttatgggaccaaattgaataaaagaaataagttaaaggaccggcatatcaatta 30640802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 34642867 - 34642687
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||| | ||||||||||| |        |||||||||||||||||||||||  ||||| |    
T  34642867 ataaattagatgttggtgatatactataaaatctgatagacctccgcaatccaacggttt-tttttttaggggattaaaattatcaaaattaaaccaaat 34642769  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaag 221  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||   || ||||| ||||||||||||||||||||    
T  34642768 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataagttaag 34642687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 222
Target Start/End: Original strand, 20309966 - 20310149
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnn-aggggattaaaattatcaaaattggaccaat 138  Q
    |||| |||||||| ||||||||||| |||||||||| ||||||   ||||||||||||||         | |||||||||||||||||||||| |||||     
T  20309966 ataagttaggtgtaggtgatacactataaaatctgacagaccttcataatccaacggtcttttttttctaagggattaaaattatcaaaattgaaccaaa 20310065  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    | |||||||||||||||||||||||| |||||||||||| ||||||||||||| || ||| | |||||||||||||||||||||    
T  20310066 tcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaataaaagaaataagttaagg 20310149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 222
Target Start/End: Original strand, 21096599 - 21096782
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnn-aggggattaaaattatcaaaattggaccaat 138  Q
    |||| |||||||| ||||||||||| |||||||||| ||||||   ||||||||||||||         | |||||||||||||||||||||| |||||     
T  21096599 ataagttaggtgtaggtgatacactataaaatctgacagaccttcataatccaacggtcttttttttctaagggattaaaattatcaaaattgaaccaaa 21096698  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    | |||||||||||||||||||||||| |||||||||||| ||||||||||||| || ||| | |||||||||||||||||||||    
T  21096699 tcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaataaaagaaataagttaagg 21096782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 249
Target Start/End: Original strand, 34643880 - 34644083
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||||| |  ||||||||||||||||||   |||||||||||||        |||||||||||||||||||||||| || || |    
T  34643880 ataaattaggtgttggtgatacgccataaaatctgatagacctc---aatccaacggtct--ttttttaggggattaaaattatcaaaattgaactaaat 34643974  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    | |||||||||||||| ||||  || ||||||||||||||||||| |||||  || ||||| |||||||||||||||| |||| ||||||| ||||||||    
T  34643975 taaataaaagaaataaattaatagaggtgtttgagaaagttaagatttatgggac-aaattgaataaaagaaataagtcaagggaccgacggatcaatta 34644073  T
Q  240 agccaaaatt 249  Q
    ||| ||||||    
T  34644074 agctaaaatt 34644083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 111 - 240
Target Start/End: Original strand, 43585930 - 43586059
Alignment:
Q  111 ggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaaga 210  Q
    ||||||||||||| ||||||||| ||| ||||||||| ||||||| ||||  ||  ||||||||||| ||||||||||||| |  |||||||||||||||    
T  43585930 ggattaaaattattaaaattggatcaaattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgagatcaaattaaataaaaga 43586029  T
Q  211 aataagttaaggaaccgacgtatcaattaa 240  Q
    |||||||||||| ||||||  |||||||||    
T  43586030 aataagttaagggaccgacagatcaattaa 43586059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 3714550 - 3714638
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||||||||||||||||||| |||||||  || ||||| |||||||||||||||||||||||||| |  ||||||||||||    
T  3714550 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaaggaaccggcagatcaattaagcc 3714638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 31203068 - 31202964
Alignment:
Q  141 gaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaa 240  Q
    |||||||||||||||||||||||| |||||||||||| |||||| |||||  || ||| | ||||||||||||||||||||||| ||||  || ||||||    
T  31203068 gaataaaagaaataagttaagggacgtgtttgagaaacttaagatttatgggaccaaaatgaataaaagaaataagttaaggaaacgacagattaattaa 31202969  T
Q  241 gccaa 245  Q
    |||||    
T  31202968 gccaa 31202964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 3713149 - 3713061
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagccaa 245  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||  ||||||  ||||||||||||||    
T  3713149 agttaagggatgtgtttgagaaagttaaaacttatg-aaccaaattaaataaaagaaataa-ttaagagaccgacagatcaattaagccaa 3713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 43134079 - 43134167
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||||||||||||||| |||||||||| | ||||   || ||||| ||||||||||||||||||| | |||||| |||||||||||||    
T  43134079 agttaagggatgtgtttaagaaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggaccgacatatcaattaagcc 43134167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 20066276 - 20066216
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    ||||||||||||||||||||||||||| ||||||||| || |||| | |||||||||||||    
T  20066276 ataaattaggtgttggtgatacactgttaaatctgatggatctcttttatccaacggtctc 20066216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11080933 - 11080896
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11080933 ttcttccctcatcttcatcttcatacaaccttcatcaa 11080896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22012361 - 22012398
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  22012361 ttcttccctcatctttatcttcattcaaccttcatcaa 22012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 22012340 - 22012280
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    |||||| |||||||||||||||||| ||||||||| ||||||||  | |||||||| ||||    
T  22012340 ataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctc 22012280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 22013174 - 22013234
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    |||||| |||||||||||||||||| ||||||||| ||||||||  | |||||||| ||||    
T  22013174 ataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctc 22013234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 35462907 - 35462967
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||  | |||||||| ||||    
T  35462907 ataaattaggtgttggtgatacactgttagatcagatagacctcatttatccaacgatctc 35462967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 11080950 - 11081010
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    |||||| ||||||||||||||||| || | ||||||||||||||  | |||||| ||||||    
T  11080950 ataaatcaggtgttggtgatacacagttagatctgatagacctcatttatccaaaggtctc 11081010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30644608 - 30644572
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||||||||| |||||| |||||||||    
T  30644608 ttcttccctcatcttcatctacattcatccttcatca 30644572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 43133983 - 43134027
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctct 84  Q
    |||||| | |||||||||||||||| ||||||||| |||||||||    
T  43133983 ataaatcaagtgttggtgatacactataaaatctggtagacctct 43134027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 40 - 241
Target Start/End: Original strand, 43393968 - 43394170
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||| ||||||||||||||||||||||||||    
T  43393968 ataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagggggttaaaattatcaaaattggaccaatt 43394067  T
Q  140 tgaataaaag-aaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||| |  |||||||    
T  43394068 tgaataaaagaaaataagttaagggacgtctttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaatt 43394167  T
Q  239 aag 241  Q
    |||    
T  43394168 aag 43394170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 42 - 245
Target Start/End: Original strand, 31938224 - 31938427
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||       |||||||||||||||| |||||||||| || |||    
T  31938224 aaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctctttttttaggggattaaaattattaaaattggactaaattg 31938323  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  31938324 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31938423  T
Q  242 ccaa 245  Q
    ||||    
T  31938424 ccaa 31938427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 42 - 243
Target Start/End: Complemental strand, 31937236 - 31937035
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||  ||    
T  31937236 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaaatg 31937137  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||||  || ||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  31937136 aataaaataaataagtgaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31937037  T
Q  242 cc 243  Q
    ||    
T  31937036 cc 31937035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 42 - 243
Target Start/End: Original strand, 54354308 - 54354509
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||       |||| ||||||||||||||||||||||||| |||    
T  54354308 aaattaggtgttggtgatacactgtaaaatctgatagacctctataatccaatggtctctttttatagggaattaaaattatcaaaattggaccaaattg 54354407  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||| |  || ||||||||||||||||||| ||||||| |||| |  ||||||||||    
T  54354408 aatcaaagaaataagttaagggacgtgtttgagaaagttaagacttaagggaccaaattaaataaaagaaataggttaagggaccggcagatcaattaag 54354507  T
Q  242 cc 243  Q
    ||    
T  54354508 cc 54354509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 28777602 - 28777805
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  28777602 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 28777701  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||   || ||||| |||||||||||||| |||||| |||| |  ||||||||    
T  28777702 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 28777801  T
Q  240 agcc 243  Q
    ||||    
T  28777802 agcc 28777805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 5691014 - 5691209
Alignment:
Q  44 attaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaa 143  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||||||| |||||||||||||||||| | ||| ||    
T  5691014 attaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttaggggatttaaattatcaaaattggacaagttt-aa 5691112  T
Q  144 taaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaa 240  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||| |||| |  |||||||||    
T  5691113 taaaagaaataagttaagggacgtgtttgagaaaattaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaa 5691209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 44 - 222
Target Start/End: Original strand, 17742211 - 17742390
Alignment:
Q  44 attaggtgttggtgatacactgta-aaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttga 142  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||| ||| || |    
T  17742211 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 17742310  T
Q  143 ataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  17742311 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagg 17742390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 44 - 222
Target Start/End: Original strand, 19043531 - 19043710
Alignment:
Q  44 attaggtgttggtgatacactgta-aaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttga 142  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||| ||| || |    
T  19043531 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 19043630  T
Q  143 ataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  19043631 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagg 19043710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 35759146 - 35759348
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||            |||||||||||||||||||||||||| |    
T  35759146 ataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtctgttttttttttagattaaaattatcaaaattggaccaaat 35759245  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||| |  ||||||||    
T  35759246 tgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcagatcaatta 35759345  T
Q  240 agc 242  Q
    |||    
T  35759346 agc 35759348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 41 - 245
Target Start/End: Original strand, 2233221 - 2233425
Alignment:
Q  41 taaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaattt 140  Q
    ||||||||||||||||||||| || |||||||| ||||| |||  |||||||||| ||||       || ||||||||||||||||||||||||||| ||    
T  2233221 taaattaggtgttggtgatacgctataaaatcttatagatctccataatccaacgatctctttttttagaggattaaaattatcaaaattggaccaaatt 2233320  T
Q  141 gaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaa 240  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||  |||| ||||||||||||||||||||| ||||||  |||||||||    
T  2233321 gaataaaagaaataagttaagggacatgtttgacaaagttaagacttatgagaccgaattgaataaaagaaataagttaagggaccgacagatcaattaa 2233420  T
Q  241 gccaa 245  Q
    |||||    
T  2233421 gccaa 2233425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 46902534 - 46902334
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| |||||| |||||||||| |||||||||||||||||| |||||| |||  ||||       |||||||||||||||||||||||| ||||| |    
T  46902534 ataaatttggtgttagtgatacactataaaatctgatagacctccgtaatctaacaatctcttcttttaggggattaaaattatcaaaattgcaccaaat 46902435  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||  || ||||| ||||||||||||||||||||| ||||||  ||||||||    
T  46902434 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaatta 46902335  T
Q  240 a 240  Q
    |    
T  46902334 a 46902334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 42 - 249
Target Start/End: Original strand, 52525276 - 52525483
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||| ||||||||| ||| | |||||||| ||  ||||   |||||||||||||||       |||||||||||||||| |||||||||| || |||    
T  52525276 aaattagatgttggtgacacattataaaatcttattaaccttcataatccaacggtctctttttttaggggattaaaattattaaaattggactaaattg 52525375  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||  ||||||||||    
T  52525376 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgacaaatcaattaag 52525475  T
Q  242 ccaaaatt 249  Q
     |||||||    
T  52525476 tcaaaatt 52525483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 47431102 - 47431302
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||  |||||||||||||||       |||||||||||||||||||||||||||||| |    
T  47431102 ataaattaggtgtgggtgatacactataaaatctaatagacctccataatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 47431201  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||| |||||||||||||||||| | |||||||| |||||||| |||||||| || ||||| |||||||||||||| |||||| || |||  ||||||||    
T  47431202 tgaacaaaagaaataagttaaggaacgtgtttgaaaaagttaaaacttatgagaccaaattgaataaaagaaataaattaagggactgacaaatcaatta 47431301  T
Q  240 a 240  Q
    |    
T  47431302 a 47431302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 17116404 - 17116202
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||| |||||| |||||| ||||||||||||| ||       |||| ||||||||||||||||||| ||||| |    
T  17116404 ataaattaggtgttggtgatacactataaactctgatggacctccgtaatccaacggtgtcattttttaggg-attaaaattatcaaaattgaaccaaat 17116306  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||||||||||| |||| |||||||| || ||||| ||||||||||||||||||||| | || |  ||||||||    
T  17116305 tgaataaaagaaataagttaagggacgtgtttgagaaacttaacacttatgagaccaaattgaataaaagaaataagttaagggatcggcagatcaatta 17116206  T
Q  240 agcc 243  Q
    ||||    
T  17116205 agcc 17116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 23073289 - 23073492
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||| ||||| ||||||||||       |||||||||||||||||||||||| |||| ||    
T  23073289 ataaattaggtgttggtgatacaccgtaaaatttgatacacctccgtaattcaacggtctctttttttaggggattaaaattatcaaaattgaaccagtt 23073388  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||||  | |||||||||||||||| |||||  || ||||| ||||||||||||||||||| | |||| |  ||||||||    
T  23073389 tgaataaaagaaataagttaagggacatctttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaaaggaccggcagatcaatta 23073488  T
Q  240 agcc 243  Q
    ||||    
T  23073489 agcc 23073492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 247
Target Start/End: Original strand, 46903539 - 46903746
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||        ||||||||||||| |||||||||| ||||| |    
T  46903539 ataaattaggtgttggtgatacactataaaatctaatagacctccgtaatccaacggtctttttttttaggggattaaaatcatcaaaattgtaccaaat 46903638  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||| ||| |||||||| ||| |||||| |||||  || ||||| ||||||||||||||||||||| || ||   ||||||||    
T  46903639 tgaataaaagaaataagttaaaggacgtgtttgaaaaacttaagatttatgggaccaaattgaataaaagaaataagttaagggactgaaagatcaatta 46903738  T
Q  240 agccaaaa 247  Q
    ||||||||    
T  46903739 agccaaaa 46903746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 40 - 227
Target Start/End: Complemental strand, 55209984 - 55209798
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||| ||||||        | ||||||||||||||||||||||||||| |    
T  55209984 ataaattaggtgttggtaatacactataaattctgatagacctccgtaatccaatggtctcttttttc-gtggattaaaattatcaaaattggaccaaat 55209886  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    | |||||||||||||| |||||||| ||||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||||| ||||    
T  55209885 taaataaaagaaataaattaagggacgtgtttgagaaagttaaaacttatggaaccaaattgaataaaagaaataagttaagggaccg 55209798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 242
Target Start/End: Complemental strand, 37609524 - 37609322
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||| ||||| | |||||| |||||||||  |||||||||||||||       |||||||||||||||| ||||||||| ||| |    
T  37609524 ataaattaggtgttgatgagacactattaaatcttatagacctccctaatccaacggtctctttttttaggggattaaaattattaaaattggatcaaat 37609425  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||   || ||||||||||||||||||||||||| | |||| |  ||||||||    
T  37609424 tgaataaaagaaataagttgagggacgtgtttgagaaagttaagacttatatgaccaaattaaataaaagaaataagttaaaggaccggcagatcaatta 37609325  T
Q  240 agc 242  Q
    |||    
T  37609324 agc 37609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 2232805 - 2232602
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||| |||||        |||||||||||||||| |||||||||  || |    
T  2232805 ataaattaggtgttgctgatacaccgtaaaatctcatagacctccgtaatccaatggtctttttttctaggggattaaaattattaaaattggattaaat 2232706  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||| |||||||| || ||||||||||||||||||||||  || ||||| ||||||||||||||||||||| | || |  ||||||||    
T  2232705 tgaataaaagaaataaattaagggacgtatttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggatcggcagatcaatta 2232606  T
Q  240 agcc 243  Q
    ||||    
T  2232605 agcc 2232602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 40 - 222
Target Start/End: Complemental strand, 52522129 - 52521948
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||        ||||||||||| |||||||||||||||||| |    
T  52522129 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaactgtct-tttttttaggggattaaagttatcaaaattggaccaaat 52522031  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    ||||||||| |||||||| || ||| |||||||||||||||||||  ||||| || ||||| ||| |||||||||||||||||    
T  52522030 tgaataaaataaataagtgaaaggacgtgtttgagaaagttaagatctatgagaccaaattgaattaaagaaataagttaagg 52521948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 53180719 - 53180920
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||       || ||||||||||||| |||||||||| || |    
T  53180719 ataaattaggtgttggtgatacactatacaatctgatagacctccgtaatccaacggtctccttttttagaggattaaaattattaaaattggactaaat 53180818  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||| ||||||||||| | | |||||||||||||||| ||||||||| |  ||||| ||||||| ||||||||||||| |||| |  ||||||||    
T  53180819 tgaataaaaaaaataagttaaagaacgtgtttgagaaagttacgacttatgagatcaaattgaataaaa-aaataagttaagggaccggcaaatcaatta 53180917  T
Q  240 agc 242  Q
    |||    
T  53180918 agc 53180920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 21728113 - 21727910
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||| | ||||||  |||||||||  |||||| ||| ||||        ||| |||||||||||||||||||| | ||| |    
T  21728113 ataaattaggtgttggtgatacattataaaatgagatagaccttcgtaatctaacagtctacttttttaggagattaaaattatcaaaattgaatcaaat 21728014  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| || ||||| |||||||||||||||||| || |||| |  ||||||||    
T  21728013 tgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttatgggaccggcagatcaatta 21727914  T
Q  240 agcc 243  Q
    ||||    
T  21727913 agcc 21727910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 40 - 242
Target Start/End: Complemental strand, 11347015 - 11346813
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| || ||| || |||||||   |||||||| ||||||       |||||||||||||||||||||||||| ||| |    
T  11347015 ataaattaggtgttggtgatacactatacaatatggtagaccttcataatccaatggtctctcttttcaggggattaaaattatcaaaattggaacaaat 11346916  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||| |||||| | |||||||| |||||||||| ||||   || |||||||||||||||||||| |||||| ||||||  ||||||||    
T  11346915 tgaataaaagaaataaattaaggcacgtgtttgataaagttaagatttatatgaccaaattaaataaaagaaataaattaagggaccgacagatcaatta 11346816  T
Q  240 agc 242  Q
    |||    
T  11346815 agc 11346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 53765881 - 53766083
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||| || || |||||||||||||||||||||  |||||||| |||||||||  || ||       |||||||||||||||| ||||||||| ||| |    
T  53765881 ataaatcagatggtggtgatacactgtaaaatctcgtagacctccgtaatccaatagtttctctttttaggggattaaaattattaaaattggatcaaat 53765980  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||| | ||| ||||| ||||||||||||||||||||| |||  |  ||||||||    
T  53765981 tgaataaaagaaataagttaagggacgtgtttgagaaaattaagacttacggaaccaaattgaataaaagaaataagttaagggacccgcagatcaatta 53766080  T
Q  240 agc 242  Q
    |||    
T  53766081 agc 53766083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 243
Target Start/End: Complemental strand, 54353221 - 54353023
Alignment:
Q  45 ttaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaat 144  Q
    ||||||||| |||||||||  |||||||||||||||||  ||||||||||||||||        ||||||||||||||| ||||||||||||| |||| |    
T  54353221 ttaggtgttagtgatacacgataaaatctgatagaccttcgtaatccaacggtctctttttttcggggattaaaattataaaaattggaccaaattgagt 54353122  T
Q  145 aaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||  |  ||||| ||||||||||||||||||| | |||| |  ||||||||||||    
T  54353121 aaaagaaataagttaagggacatgtttgataaagttaagacttatgggatcaaattgaataaaagaaataagttaaaggaccgtcagatcaattaagcc 54353023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 40 - 229
Target Start/End: Original strand, 21729103 - 21729292
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||||| |||||| || |||||||   |||||||| ||||||       || ||||||||||||||||||||| | ||| |    
T  21729103 ataaattaggtgttgatgatacactataaaatatggtagaccttcataatccaatggtctcattttttagaggattaaaattatcaaaattgaatcaaat 21729202  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgac 229  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||  |||||||| |||||||||||||| |||||| ||||||    
T  21729203 tgaataaaagaaataagttaagggacgtgtttgagaaagttagaacttatgggactaaattgaataaaagaaataaattaagggaccgac 21729292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 28776651 - 28776502
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||| | |||||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  28776651 ataaattaggtgttgatgatacattataaaatctgatagacctccgtaatccaacggtctctgtttttaggggattaaaattatcaaaattggaccaaat 28776552  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttat 189  Q
    |||||||||||||| ||||||||||  ||||||||||| |||||| ||||    
T  28776551 tgaataaaagaaatcagttaagggacttgtttgagaaaattaagatttat 28776502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 5689922 - 5689725
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||       |  ||||||||||||||||||||||||||| |    
T  5689922 ataaattaagtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctcttgttttaaaggattaaaattatcaaaattggaccaaat 5689823  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    | ||||||||||||||||||||||| ||||||| ||||       ||||||  || ||||| ||||||||||||||| ||||| | ||||  ||||||||    
T  5689822 ttaataaaagaaataagttaagggacgtgtttgggaaa------tcttatgggaccaaatttaataaaagaaataagctaagggagcgacagatcaatta 5689729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 17741033 - 17740889
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||       |  ||||||||||||||||||||||| ||| |    
T  17741033 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatcaaaattggatcaaat 17740934  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaaga 184  Q
    | |||||||||||||||||||||||  ||||||||||||||||||    
T  17740933 ttaataaaagaaataagttaagggacatgtttgagaaagttaaga 17740889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 19042353 - 19042209
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||       |  ||||||||||||||||||||||| ||| |    
T  19042353 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatcaaaattggatcaaat 19042254  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaaga 184  Q
    | |||||||||||||||||||||||  ||||||||||||||||||    
T  19042253 ttaataaaagaaataagttaagggacatgtttgagaaagttaaga 19042209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 50881092 - 50881231
Alignment:
Q  108 aggggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaa 207  Q
    |||||||||||||||||||||||| || || ||||||||||||||||| |||||||| |||||||||||||||||||||||||     ||||| ||||||    
T  50881092 aggggattaaaattatcaaaattgaactaaattgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtggtcaaattgaataaa 50881191  T
Q  208 agaaataagttaaggaaccgacgtatcaattaagccaaaa 247  Q
    ||||||||||||||| ||||||  ||||||||||||||||    
T  50881192 agaaataagttaagggaccgacacatcaattaagccaaaa 50881231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 10979090 - 10979293
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| |||||||||||||| ||||||| ||||| ||||| ||||||||| ||||||       | |||| ||||||||||||||||| | ||| |    
T  10979090 ataaattagatgttggtgatacaccgtaaaatttgataaacctccgtaatccaatggtctcttttttaaagggactaaaattatcaaaattgaatcaaat 10979189  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||| ||  || |||||||||||| |||||| |||||  || ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  10979190 tgaataaaagaaataagtgaaatgacgtgtttgagaaatttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 10979289  T
Q  240 agcc 243  Q
    ||||    
T  10979290 agcc 10979293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 47917528 - 47917708
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||||||| ||||||| |||||||||||| ||||| ||||||||||  |||        |||||||||||||||| |||||| || ||| |    
T  47917528 ataaattcggtgttggtaatacactataaaatctgataaacctccgtaatccaacaatctttatttttaggggattaaaattattaaaattagatcaaat 47917627  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaag 221  Q
    |||||||||||||||||||| |||| ||||||||||||  ||||| |||||| || ||||||||||||||||||||||||||    
T  47917628 tgaataaaagaaataagtta-gggacgtgtttgagaaaactaagatttatgagaccaaattaaataaaagaaataagttaag 47917708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 243
Target Start/End: Original strand, 11348390 - 11348589
Alignment:
Q  43 aattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttga 142  Q
    |||||||||| ||||||| ||| |||||||||||||||||| ||||| ||||||||||       | || ||||||||||||||||||||| ||| || |    
T  11348390 aattaggtgt-ggtgatatactataaaatctgatagacctccgtaattcaacggtctctttttctaaggaattaaaattatcaaaattggatcaaattaa 11348488  T
Q  143 ataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagc 242  Q
    ||||||||||| |||||||| |  ||| ||| |||||||| |||||||| || ||||| ||||||||||||||||||||| |||| |  |||||||||||    
T  11348489 ataaaagaaattagttaaggaacatgtatgataaagttaatacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 11348588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 37610678 - 37610798
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||| |    
T  37610678 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaattatcaaaattggaccaaat 37610777  T
Q  140 tgaataaaagaaataagttaa 160  Q
    ||||||||| |||||||||||    
T  37610778 tgaataaaaaaaataagttaa 37610798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 246
Target Start/End: Complemental strand, 53178834 - 53178698
Alignment:
Q  110 gggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaag 209  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||| |||||||||  ||||| |||||||     
T  53178834 gggattaaaatgatcaaaattggatcaaattgaataaaagaaataagttaaggaacgtgtttgagaaagttaaggcttatgaaatcaaattgaataaaaa 53178735  T
Q  210 aaataagttaaggaaccgacgtatcaattaagccaaa 246  Q
    ||||||||||||| | || |  |||||||||||||||    
T  53178734 aaataagttaagggatcggcagatcaattaagccaaa 53178698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 222
Target Start/End: Complemental strand, 47429825 - 47429648
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnn--aggggattaaaattatcaaaattggaccaa 137  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||| ||||          ||||||||||||||||||||||||||||||    
T  47429825 ataaattagatgttggtgatacactataaaatctaatagacctccgtaatccaacagtctttttttttttaggggattaaaattatcaaaattggaccaa 47429726  T
Q  138 tttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
     ||||| ||||||       ||| ||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  47429725 attgaacaaaaga-------taaaggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagg 47429648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 23091322 - 23091214
Alignment:
Q  112 gattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaa 211  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||||||| || |||||||||||||||||||||||||  || ||||| ||||||||||    
T  23091322 gattaaaattatcaaagttggaccaaattgaataaaagaattaagttaagagacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaa 23091223  T
Q  212 ataagttaa 220  Q
    |||||||||    
T  23091222 ataagttaa 23091214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 53764563 - 53764452
Alignment:
Q  108 aggggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaa 207  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||| ||||||    
T  53764563 aggggattaaaattatcaaaatttgactaaattgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgagaccaaattgaataaa 53764464  T
Q  208 agaaataagttaa 220  Q
    | |||||||||||    
T  53764463 a-aaataagttaa 53764452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 43392738 - 43392630
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacg 230  Q
    ||||||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||     
T  43392738 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgaca 43392639  T
Q  231 tatcaatta 239  Q
     ||||||||    
T  43392638 gatcaatta 43392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 35758207 - 35758083
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||| |           ||||||||||||||||||||||||||| |    
T  35758207 ataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtttgttttttttttggattaaaattatcaaaattggaccaaat 35758108  T
Q  140 tgaataaaagaaataagttaaggga 164  Q
    |||||||||||||||||||||||||    
T  35758107 tgaataaaagaaataagttaaggga 35758083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 111 - 243
Target Start/End: Original strand, 17117387 - 17117517
Alignment:
Q  111 ggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaaga 210  Q
    |||||||||| ||||||||| | |||| |||||||||| ||| |  |||||||| |||||||||||| ||||||||||||| || ||||| |||||||||    
T  17117387 ggattaaaatcatcaaaatttgcccaaattgaataaaaaaaaaa--ttaagggacgtgtttgagaaacttaagacttatgagaccaaattgaataaaaga 17117484  T
Q  211 aataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||| ||||||  ||||||||||||    
T  17117485 aataagttaagggaccgacagatcaattaagcc 17117517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 112 - 240
Target Start/End: Original strand, 15290476 - 15290604
Alignment:
Q  112 gattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaa 211  Q
    |||||||||||| ||||||||| ||| ||||||||| ||||||| ||||  ||  ||||||||||| ||||||||||||  |  ||||||||||||||||    
T  15290476 gattaaaattattaaaattggatcaaattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgtgatcaaattaaataaaagaa 15290575  T
Q  212 ataagttaaggaaccgacgtatcaattaa 240  Q
    ||||||||||| ||||||  |||||||||    
T  15290576 ataagttaagggaccgacagatcaattaa 15290604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 111 - 243
Target Start/End: Original strand, 46986077 - 46986208
Alignment:
Q  111 ggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaaga 210  Q
    |||||||||||||||||||| |||||| || ||||| | ||||||||||||||| |||||||||| |||||||||||||   || ||||| |||||||||    
T  46986077 ggattaaaattatcaaaatttgaccaaatttaataaga-aaataagttaagggacgtgtttgagagagttaagacttattggaccaaattgaataaaaga 46986175  T
Q  211 aataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||| ||||||  ||| |  ||||||||||||    
T  46986176 aataaattaaggggccggcaaatcaattaagcc 46986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 10978206 - 10978093
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    |||||||||| |||||||||||| |||||| | ||||||||  ||||||||||||| ||       |||||||||||||||| |||||||||| || |||    
T  10978206 aaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaaattggactaagttg 10978107  T
Q  142 aataaaagaaataa 155  Q
    ||||||||||||||    
T  10978106 aataaaagaaataa 10978093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 33113306 - 33113376
Alignment:
Q  113 attaaaattatcaaaattggaccaatttgaat-aaaagaaataagttaagggatgtgtttgagaaagttaa 182  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||    
T  33113306 attaaaattatcaaaattggaccaaattgaataaaaagaaataagttaagggacgtgtttgaaaaagttaa 33113376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 50879888 - 50879782
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| |||| | |        | ||||||||||||||||||||||||| || |||    
T  50879888 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatctaacgatttttttttctatgggattaaaattatcaaaattggacaaaattg 50879789  T
Q  142 aataaaa 148  Q
    |||||||    
T  50879788 aataaaa 50879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 55210823 - 55210945
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||| |||||||||||||| | |||||||||||||| ||| ||||| |||| || ||       || |||||||||||||||||||||  |||| |    
T  55210823 ataaattatgtgttggtgatacattataaaatctgatagatctccgtaattcaacagtatctttttttagtggattaaaattatcaaaattgatccaaat 55210922  T
Q  140 tgaataaaagaaataagttaagg 162  Q
    | |||||||||||||||||||||    
T  55210923 ttaataaaagaaataagttaagg 55210945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 27749199 - 27749122
Alignment:
Q  150 aaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    |||| |||||||||||  |||| ||||||||||||||||||  |||||||| ||||||||| ||||||||||||||||    
T  27749199 aaatgagttaagggatacgtttaagaaagttaagacttatgtgactaaattgaataaaagacataagttaaggaaccg 27749122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 23072171 - 23072056
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacg 230  Q
    ||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||  || ||||| |||||| ||||| | |||||| |||  |     
T  23072171 ggaccaaattgaataaaagaaataagttaa-ggacgtctttgagaaagttaagacttatgggaccaaattgaataaatgaaatgaattaagggaccagca 23072073  T
Q  231 tatcaattaagccaaaa 247  Q
     ||||||||| ||||||    
T  23072072 gatcaattaaaccaaaa 23072056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 34014596 - 34014508
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||||||||| || |||||||| |||||  || ||||| ||||||||||||||||||||| |||| |  ||||||||||||    
T  34014596 agttaagggatgtgtttgcgacagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 34014508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 50879594 - 50879515
Alignment:
Q  143 ataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    |||||| |||||| |||||||| |||||| |||||||||||| |||||  || ||||| |||||||||||||||||||||    
T  50879594 ataaaaaaaataatttaagggacgtgtttaagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagg 50879515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 24376458 - 24376546
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||||||||| ||  ||||| |||||||| || ||||| ||||||||||||||||||| | |||| |  ||||||||||||    
T  24376458 agttaagggatgtgtttgtgactgttaaaacttatgagaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 24376546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 27750461 - 27750526
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    ||||||||||||||||||| ||| |||| |||||||| || ||||| |||||||||||||| ||||    
T  27750461 agttaagggatgtgtttgaaaaaattaaaacttatgagaccaaattgaataaaagaaataaattaa 27750526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 34015798 - 34015886
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||| ||||||||||| || | ||| ||||||||  || ||||| |||||||||||||| |||||| ||||||  ||||||||||||    
T  34015798 agttaaaggatgtgtttgcgacatttatgacttatgggaccaaattgaataaaagaaataacttaagggaccgacaaatcaattaagcc 34015886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43392824 - 43392860
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  43392824 ttcttccctcatcttcatcttcattcaaccttcatca 43392860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 53764951 - 53764896
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggt 97  Q
    |||||| |||||||||||||||  |||||||||||||||||| ||||| |||||||    
T  53764951 aaattaagtgttggtgatacaccataaaatctgatagacctccgtaattcaacggt 53764896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23072257 - 23072294
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||||||||||| |||||||||    
T  23072257 ttcttccctcatcttcatcttcattcaagcttcatcaa 23072294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48338029 - 48337992
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  48338029 ttcttccctcatcttcatcttcatacaaccttcatcaa 48337992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 43392809 - 43392766
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctc 83  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||    
T  43392809 ataaatttggtgttggtggtacactataaaatctgatagacctc 43392766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 50879546 - 50879512
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaagggat 165  Q
    ||||||| |||||||||||||||||||||||||||    
T  50879546 ggaccaaattgaataaaagaaataagttaagggat 50879512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 17742360 - 17742393
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaagggat 165  Q
    |||||| |||||||||||||||||||||||||||    
T  17742360 gaccaaattgaataaaagaaataagttaagggat 17742393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 19043680 - 19043713
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaagggat 165  Q
    |||||| |||||||||||||||||||||||||||    
T  19043680 gaccaaattgaataaaagaaataagttaagggat 19043713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 34014560 - 34014527
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaaggga 164  Q
    ||||||| ||||||||||||||||||||||||||    
T  34014560 ggaccaaattgaataaaagaaataagttaaggga 34014527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37610663 - 37610626
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  37610663 ttcttccctcatcttcgtcttcattcatccttcatcaa 37610626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 55210002 - 55210039
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  55210002 ttcttccctcatcttcatctacattcatccttcatcaa 55210039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 47429678 - 47429646
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaaggga 164  Q
    |||||| ||||||||||||||||||||||||||    
T  47429678 gaccaaattgaataaaagaaataagttaaggga 47429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 9e-67; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 42 - 243
Target Start/End: Original strand, 39350562 - 39350763
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       || ||||||||||||| ||||||||||||| ||     
T  39350562 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagaggattaaaattataaaaattggaccaaatta 39350661  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||| | |||||||||||    
T  39350662 agtaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcatatcaattaag 39350761  T
Q  242 cc 243  Q
    ||    
T  39350762 cc 39350763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 18654500 - 18654296
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaa-t 138  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       | ||||||||||| |||||||||||||||| |    
T  18654500 ataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctcttttttaatgggattaaaatgatcaaaattggaccaaat 18654401  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    || ||||||||||||||||||||||| |||||||||||||||||||||||||  || ||||| |||||||||||||| |||||| |||| |  |||||||    
T  18654400 tttaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccggcagatcaatt 18654301  T
Q  239 aagcc 243  Q
    |||||    
T  18654300 aagcc 18654296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 18655567 - 18655770
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||  |||||||||||||| |||||||||||||||| |  ||||| ||||||||||       |||||||||||||||||||| ||||||||| |    
T  18655567 ataaattaattgttggtgatacaccgtaaaatctgatagactttcgtaattcaacggtctctttttttaggggattaaaattatcaaagttggaccaaat 18655666  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||||| |  ||||||||    
T  18655667 tgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaaggaaccggcagatcaatta 18655766  T
Q  240 agcc 243  Q
    ||||    
T  18655767 agcc 18655770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 41 - 227
Target Start/End: Complemental strand, 9082181 - 9081995
Alignment:
Q  41 taaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaattt 140  Q
    ||||||||||||| | |||| ||| ||||||||||||||| || || |||||||||||||       |||||||||||||||||||||||||||||| ||    
T  9082181 taaattaggtgttagcgatatactataaaatctgatagacatccgtgatccaacggtctcattttctaggggattaaaattatcaaaattggaccaaatt 9082082  T
Q  141 gaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||  ||||| |||||||||||| |||||||||||||    
T  9082081 gaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaatcaaattgaataaaagaaatgagttaaggaaccg 9081995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 247
Target Start/End: Original strand, 9083216 - 9083418
Alignment:
Q  45 ttaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaat 144  Q
    |||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||       |||||||||||||||||||||||||||||| ||||||    
T  9083216 ttaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctccttttttaggggattaaaattatcaaaattggaccaaattgaat 9083315  T
Q  145 aaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcca 244  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||  || ||||| |||||||||||| | ||||| ||||| |  |||||||||||||    
T  9083316 aaaataaaaaagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaatgaattaagaaaccggcagatcaattaagcca 9083415  T
Q  245 aaa 247  Q
    |||    
T  9083416 aaa 9083418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 40 - 241
Target Start/End: Complemental strand, 19229041 - 19228840
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  19229041 ataaattaggtgttgatgatacactataaaatctaatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 19228942  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||||   || ||||| |||||||||||||| |||||| |||| |  ||||||||    
T  19228941 tgaataaaagaaatcagttaaggaacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 19228842  T
Q  240 ag 241  Q
    ||    
T  19228841 ag 19228840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 13278146 - 13278346
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||       | |||||||||||||||||||||||| ||| |    
T  13278146 ataaattaggtgttggtgatacactataaaatctgatagacctccctaatccaacggtctctttttctatgggattaaaattatcaaaattggatcaaat 13278245  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||  ||| ||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||| |||||| |||||| ||||||  ||||||||    
T  13278246 tgaagtaaaaaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataaattaagggaccgacagatcaatta 13278345  T
Q  240 a 240  Q
    |    
T  13278346 a 13278346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 12372517 - 12372314
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||| |        |||| ||||||||||||||||||||| ||| |    
T  12372517 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtatgtttttttagggtattaaaattatcaaaattggatcaaat 12372418  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||| |||| |  ||||||||    
T  12372417 tgaataaaacaaataagttaagagacgtgtttgagaaagttaagacttatgagaccaaattgaataaaacaaataagttaagggaccggcagatcaatta 12372318  T
Q  240 agcc 243  Q
    ||||    
T  12372317 agcc 12372314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 19229988 - 19230191
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||| |||||| ||||||||| |||||| ||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  19229988 ataaattaagtgttgatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaaattggaccaaat 19230087  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||   || ||||| |||||||||||||| |||||| | || |  ||||||||    
T  19230088 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggatcggcagatcaatta 19230187  T
Q  240 agcc 243  Q
    ||||    
T  19230188 agcc 19230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 246
Target Start/End: Original strand, 6803540 - 6803745
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| ||||||||||||||| ||||||||||||||| | ||||||| ||||||||        |  ||||||||||||||||||||||||||| |    
T  6803540 ataaattagatgttggtgatacactataaaatctgatagactt-tgtaatctaacggtctgtttttttaaaggattaaaattatcaaaattggaccaaat 6803638  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||  |  ||||||||||| ||||||||||||  || |||||||||||||||||||| |||||| ||||||  ||||||||    
T  6803639 tgaataaaagaaataagttaagaaacatgtttgagaaaattaagacttatgtgaccaaattaaataaaagaaataaattaagggaccgacagatcaatta 6803738  T
Q  240 agccaaa 246  Q
    |||||||    
T  6803739 agccaaa 6803745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 39349683 - 39349480
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||| |||  |||||||| ||||||||| |||||| ||||||| |       |||||||||||||||| ||||||| ||||| |    
T  39349683 ataaattaggtgttggtgatccacgataaaatctaatagacctccgtaatcaaacggtcactttttttaggggattaaaattataaaaattgaaccaaat 39349584  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||| ||||||||||||||||| ||| ||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||| | |||| |  ||||||||    
T  39349583 tgagtaaaagaaataagttaaaggacgtgtttgagaaagttaagagttatggaaccaaattgaataaaagaaataagttaaaggaccgtcagatcaatta 39349484  T
Q  240 agcc 243  Q
    ||||    
T  39349483 agcc 39349480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 12373632 - 12373839
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggg----gattaaaattatcaaaattggacc 135  Q
    ||||||||||||||||||||||| ||||||||||||||||| |  |||||||||||||||                ||||||||||||||||||||||||    
T  12373632 ataaattaggtgttggtgatacagtgtaaaatctgatagacattcgtaatccaacggtctgtttttttttttttttgattaaaattatcaaaattggacc 12373731  T
Q  136 aatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatca 235  Q
    || |||||||||| ||||||||||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||||||| | |||| || ||||    
T  12373732 aaattgaataaaataaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaaaggaccggcggatca 12373831  T
Q  236 attaagcc 243  Q
    ||||||||    
T  12373832 attaagcc 12373839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 39164257 - 39164091
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||| |||||| |||| ||||| |||| ||||        |||| |||||||| |||||||||||||||| |    
T  39164257 ataaattaggtgttggtgatacactataaaatttgataggcctccgtaattcaacagtcttttttttaaggg-attaaaat-atcaaaattggaccaaat 39164160  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaa 208  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||    
T  39164159 tgaataaaagaaataagttaagggacgtgtttgataaagttaagacttatgagactaaattgaataaaa 39164091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 13276998 - 13276819
Alignment:
Q  64 tgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaaggg 163  Q
    |||||||| ||||| ||||| |||||||||||||||        | ||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  13276998 tgtaaaatgtgatacacctccgtaatccaacggtctttttttttaagggattaaaattatcaaaatttgaccaaattgaataaaagaaataagttaaggg 13276899  T
Q  164 atgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    | |||||||||||| |||||| ||||   || ||||| ||||||||||||||||||||| |||| |  ||||||||||||    
T  13276898 acgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 13276819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 4032024 - 4031903
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| ||||||||| ||||| || ||||| ||||||||||       || |||||||||||||||||||||||| || |    
T  4032024 ataaattaggtgttggtgatacactataaaatctggtagacttccgtaattcaacggtctctttttttagtggattaaaattatcaaaattggactaaat 4031925  T
Q  140 tgaataaaagaaataagttaag 161  Q
    ||||||||||||||||||||||    
T  4031924 tgaataaaagaaataagttaag 4031903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 6802075 - 6801995
Alignment:
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||    
T  6802075 aataaaagaaataagttaagggacgtgtttgagaaaattaagacttatgagaccaaattaaaaaaaagaaataagttaagg 6801995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 8447181 - 8447093
Alignment:
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||  || ||||| ||||||||||||||||||||| ||||    
T  8447181 ttgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccg 8447093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 4032940 - 4033065
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||| ||||||||  ||||||| | |||||||||||||||||| ||||||||||||||||       || ||||||||||||| ||||||||||||| |    
T  4032940 ataaactaggtgttaatgatacattataaaatctgatagacctccgtaatccaacggtctctttttttagtggattaaaattattaaaattggaccaagt 4033039  T
Q  140 tgaataaaagaaataagttaagggat 165  Q
    | ||||||| ||||||||||| ||||    
T  4033040 taaataaaaaaaataagttaaaggat 4033065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 25001717 - 25001643
Alignment:
Q  168 gtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagc 242  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||||| | |||||| ||||||||||||    
T  25001717 gtttgcgaaagttaagacttatgaaatcaaattgaataaaagaaataagttaaaggaccgacatatcaattaagc 25001643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 35952464 - 35952531
Alignment:
Q  153 taagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    |||||||||||| | |||||| |||||||||| |||||| || ||||| |||||||||||||||||||    
T  35952464 taagttaagggacgcgtttgacaaagttaagatttatgagaccaaattgaataaaagaaataagttaa 35952531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 4031931 - 4031877
Alignment:
Q  193 actaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagccaaaa 247  Q
    |||||||| ||||||||||||||||||||  |||| |  ||||||||||||||||    
T  4031931 actaaattgaataaaagaaataagttaagtgaccggcagatcaattaagccaaaa 4031877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 25001823 - 25001781
Alignment:
Q  41 taaattaggtgttggtgatacactgtaaaatctgatagacctc 83  Q
    ||||||||||||| |||||||||||||| |||| |||||||||    
T  25001823 taaattaggtgtttgtgatacactgtaagatcttatagacctc 25001781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 8447129 - 8447096
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaaggga 164  Q
    ||||||| ||||||||||||||||||||||||||    
T  8447129 ggaccaaattgaataaaagaaataagttaaggga 8447096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14357783 - 14357746
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  14357783 ttcttccctcatcttcatattcatacaaccttcatcaa 14357746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18654518 - 18654551
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttca 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  18654518 ttcttccctcatcttcatcttcattcatccttca 18654551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 30673535 - 30673572
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  30673535 ttcttccctcatcttcatcttcatacaagcttcatcaa 30673572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30916019 - 30915982
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  30916019 ttcttccctcatcttcatcttcatactaccttcatcaa 30915982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12372532 - 12372568
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||||||||| |||||| |||||||||    
T  12372532 ttcttccctcatcttcatctacattcatccttcatca 12372568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 9e-67; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 50484913 - 50485098
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||       |||||||||||||||||||||||||||||| |||    
T  50484913 aaattaggtgttggtgatacactgtaaaatctgatagacctatgtaatccaatggtctctttttttaggggattaaaattatcaaaattggaccaaattg 50485012  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||| |||||||||||||| ||||    
T  50485013 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaatgaaataagttaagggaccg 50485098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 40 - 246
Target Start/End: Original strand, 5488782 - 5488988
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||       | |||||||||||||||||||||||||||| |    
T  5488782 ataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggaccaaat 5488881  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| | || || ||||||||    
T  5488882 tgaataaaagaaataagttaatgaacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggatcggcggatcaatta 5488981  T
Q  240 agccaaa 246  Q
    |||||||    
T  5488982 agccaaa 5488988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 51693350 - 51693147
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||       |||| ||||||||||||||||||| ||||| |    
T  51693350 ataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatcaaaattgaaccaaat 51693251  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||  || ||||| ||||||||||||||||||||| ||||||  ||||||||    
T  51693250 tgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaatta 51693151  T
Q  240 agcc 243  Q
    ||||    
T  51693150 agcc 51693147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 40 - 227
Target Start/End: Original strand, 7111390 - 7111577
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  7111390 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 7111489  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||   || ||||| |||||||||||||| |||||||||||    
T  7111490 tgaataaaagaaatcagttaatggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaaggaaccg 7111577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 40 - 247
Target Start/End: Complemental strand, 51468542 - 51468335
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| |||||||| |  |||        |||||||||||||||| ||||||||||||| |    
T  51468542 ataaattgggtgttggtgatacactataaaatctgatagacctccgtaatccatcaatctttttttttaggggattaaaattattaaaattggaccaaat 51468443  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||| |||| |  ||||||||    
T  51468442 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataagttaagggaccggcagatcaatta 51468343  T
Q  240 agccaaaa 247  Q
    ||||||||    
T  51468342 agccaaaa 51468335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 52759566 - 52759363
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||       | | ||||||||||||||||||||||| || |    
T  52759566 ataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaattatcaaaattggactaaat 52759467  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||| | ||||||||| ||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | || |  ||||||||    
T  52759466 tgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcggcagatcaatta 52759367  T
Q  240 agcc 243  Q
    ||||    
T  52759366 agcc 52759363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 7110429 - 7110226
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||| |||| ||||||||| |||||||||||||||||| | ||||||||| ||||       |||||||||||||||||||||||||||||| |    
T  7110429 ataaattaggcgttgatgatacactataaaatctgatagacctccgcaatccaacgatctctttttttaggggattaaaattatcaaaattggaccaaat 7110330  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||   || |||||||||||||||||||| |||||| |||| |  ||||||||    
T  7110329 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattaaataaaagaaataaattaagggaccggcagatcaatta 7110230  T
Q  240 agcc 243  Q
    ||||    
T  7110229 agcc 7110226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 40 - 227
Target Start/End: Complemental strand, 17244378 - 17244191
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||| | ||||||||| | |||||||||||||||||| ||||||||||||||||       ||| |||||||||||||||||||||||||| |    
T  17244378 ataaattaggtatcggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttttaggagattaaaattatcaaaattggaccaaat 17244279  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||||||  || ||||| ||||||||||||||||||||||||||    
T  17244278 tgaatcaaagaaataagttaagggacgtgtttgagaaagttgagacttatgggaccaaattgaataaaagaaataagttaaggaaccg 17244191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 42 - 242
Target Start/End: Complemental strand, 5488702 - 5488502
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||       | |||||||||||||||||||||||| ||| |||    
T  5488702 aaattacgtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggatcaaattg 5488603  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    ||||||||||||||||||| ||| |||||||||||||||||| |||||| ||  ||||| |||||||||||||| |||||| ||| ||  ||||||||||    
T  5488602 aataaaagaaataagttaaaggacgtgtttgagaaagttaagtcttatggaatcaaattgaataaaagaaataaattaagggaccaacagatcaattaag 5488503  T
Q  242 c 242  Q
    |    
T  5488502 c 5488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 243
Target Start/End: Complemental strand, 18819460 - 18819262
Alignment:
Q  45 ttaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaat 144  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||||| ||       |||||||||||||||| |||||||| |||| ||||||    
T  18819460 ttaggtgttggtgatacactataaaatctgatatacctccgtaatccaacggtttcttttcataggggattaaaattattaaaattgggccaaattgaat 18819361  T
Q  145 aaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||  |  ||||| ||||||| |||||| ||||||||||| |  ||||||||||||    
T  18819360 aaaagaaataaattaagggacgtgattgagaaagttaagacttatgggatcaaattgaataaaaaaaataatttaaggaaccggcagatcaattaagcc 18819262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 52087689 - 52087870
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||| ||||| ||||||||||       |||||| ||||||||||||||||| | ||| |    
T  52087689 ataaattagatgttggtgatacaccgtaaaatttgatagacctccgtaattcaacggtctctttttttaggggactaaaattatcaaaattgaatcaaat 52087788  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaag 221  Q
    |||||||||||||||||| || ||| |||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||    
T  52087789 tgaataaaagaaataagtgaaaggacgtgtttgagaaagttaagacatatgagaccaaattgaataaaagaaataagttaag 52087870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 45229518 - 45229718
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||| || | |||||||||||||||||| ||||||||||  |||        |  ||||||||||||||||||||||| ||| |    
T  45229518 ataaattaggtgttggtgatccattataaaatctgatagacctccgtaatccaacaatctttttttttataggattaaaattatcaaaattggatcaaat 45229617  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||||||||||| |||||| |||||| || ||||| |||||||||||||| |||||| ||||||  ||||||||    
T  45229618 tgaataaaagaaataagttaagggacgtgtttgagaaaattaagatttatgagaccaaattgaataaaagaaataaattaagggaccgacagatcaatta 45229717  T
Q  240 a 240  Q
    |    
T  45229718 a 45229718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 243
Target Start/End: Complemental strand, 40187800 - 40187603
Alignment:
Q  45 ttaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaat 144  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||       |||||||||||||||| ||||||||||||| |||| |    
T  40187800 ttaggtgttggtgatacacgataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattataaaaattggaccaaattgagt 40187701  T
Q  145 aaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||||||| |||  ||||||| ||||||||||||||||  || ||||| |||||||||||||||| || | |||| |  ||||||||||||    
T  40187700 aaaagaaataagttaa-ggacatgtttgataaagttaagacttatgggaccaaattgaataaaagaaataagtgaaaggaccgtcagatcaattaagcc 40187603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 42 - 243
Target Start/End: Complemental strand, 52086826 - 52086627
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    |||||||||| |||||||||||| |||||| | ||||||||  ||||||||||||| |        |||||||||||||||| |||||||||| || |||    
T  52086826 aaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggttt--ttttttaggggattaaaattattaaaattggactaaattg 52086729  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||  || ||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  52086728 aataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 52086629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 51468816 - 51469019
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||| | | |        |||||||||||||||| ||||||||||||| |    
T  51468816 ataaattaggtgttggtgatacactgtaaaatctaatagatctccgtaatccaatgctttttttttttaggggattaaaattattaaaattggaccaaat 51468915  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||| |||||||||||| ||||| |||||||| |||||||||| |||||  || ||||| ||||||| ||||||||||||| || |||  ||||||||    
T  51468916 tgaatagaagaaataagtttagggacgtgtttgaaaaagttaagatttatgggaccaaattgaataaaaaaaataagttaagggactgacagatcaatta 51469015  T
Q  240 agcc 243  Q
    ||||    
T  51469016 agcc 51469019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 40 - 227
Target Start/End: Complemental strand, 45228478 - 45228291
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||| | ||| |||||||||| |||||| ||||||| ||| ||||||||||||||||       |||||||||||||||| ||||||||||||| |    
T  45228478 ataaattaagcgtttgtgatacactataaaatttgatagatctccgtaatccaacggtctctttttttaggggattaaaattattaaaattggaccaaat 45228379  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    ||||||||||||||||||||| | | |||||||| || ||||| | |||||  || ||||||||||||||||||||||||| ||||||    
T  45228378 tgaataaaagaaataagttaaagaacgtgtttgataaggttaaaatttatgggacaaaattaaataaaagaaataagttaaagaaccg 45228291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 52761511 - 52761633
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||       |||||||||||||||||||||||||||||| |    
T  52761511 ataaattaggtgttggtgatacactataaaatctgatagacctccgcaatccaacggtctcttttttcaggggattaaaattatcaaaattggaccaaat 52761610  T
Q  140 tgaataaaagaaataagttaagg 162  Q
    |||||||||||||||||||||||    
T  52761611 tgaataaaagaaataagttaagg 52761633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 227
Target Start/End: Original strand, 38235065 - 38235251
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||| |         ||| |||||| |||| ||||||||||||| |    
T  38235065 ataaattaggtgttggtgatacactgtaaaatcttatagacattcgtaatccaacggtttgttttttttggg-attaaacttattaaaattggaccaaat 38235163  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||   || ||||| |||||||||||||| |||||| ||||    
T  38235164 ttaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaagggaccg 38235251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 44 - 243
Target Start/End: Original strand, 1823215 - 1823410
Alignment:
Q  44 attaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaa 143  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||||||||||| |        ||  |||||||||||||||||||||| ||| |||||    
T  1823215 attaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtttatctttttagaagattaaaattatcaaaattggatcaaattgaa 1823314  T
Q  144 taaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||| |||||||||||| ||  |||||||||   ||||||||||||  |||||||| ||||||||||||||||||||| |||| |  ||||||||||||    
T  1823315 taaaa-aaataagttaagcgacatgtttgaga---ttaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 1823410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 111 - 243
Target Start/End: Original strand, 17245651 - 17245782
Alignment:
Q  111 ggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaaga 210  Q
    |||||||||| |||||||||||||||| || ||||||| |||||||||||||||  ||||||||| ||||||||||||||| || ||||| |||||||||    
T  17245651 ggattaaaatgatcaaaattggaccaaatttaataaaa-aaataagttaagggacttgtttgagagagttaagacttatgagaccaaattgaataaaaga 17245749  T
Q  211 aataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||| ||||||||||| || ||||||||||||    
T  17245750 aataaattaaggaaccggcggatcaattaagcc 17245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 47533769 - 47533950
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||  ||||||||         | |||||| |||||||||||||| | ||| |    
T  47533769 ataaattaggtgttggtgatacactataaaatctgatagatctctctaatttaacggtctatttttttggaggattataattatcaaaattgaatcaaat 47533868  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaag 221  Q
    ||||| || ||||||| ||||| || || ||||| |||||||| |||||||  ||||||||||||||||||||||| |||||    
T  47533869 tgaatgaatgaaataatttaagagacgtatttgaaaaagttaaaacttatgggactaaattaaataaaagaaataatttaag 47533950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 50483713 - 50483511
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnn-aggggattaaaattatcaaaattggaccaat 138  Q
    ||||||||||||||||| ||||||  ||||||||| ||||| || |||||||||| |||||        |||||| ||||||||| |||||||||||||     
T  50483713 ataaattaggtgttggttatacacgataaaatctg-tagacttccgtaatccaacagtctcttttttttaggggagtaaaattataaaaattggaccaaa 50483615  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    ||||||||||||||||| ||||  || || ||| ||||| ||||||||||||| || ||||| |||| |||||||||||||| | ||||||  |||||||    
T  50483614 ttgaataaaagaaataaattaaatgacgtttttaagaaaattaagacttatgagaccaaattgaatacaagaaataagttaaag-accgacagatcaatt 50483516  T
Q  239 aagcc 243  Q
    |||||    
T  50483515 aagcc 50483511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 1822112 - 1821922
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||  ||||||||| ||||||| |||||||||  |||| |||||||||||       |  |||||||||||||||||||| ||| || |    
T  1822112 ataaattaggtgttaatgatacactataaaatcagatagaccttcgtaacccaacggtctctttttttaaaggattaaaattatcaaaattagactaaat 1822013  T
Q  140 tgaataaaagaaa-taagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgac 229  Q
    | ||||||| ||| |||||||||||| ||||||||||||||||| | ||||   || ||||| ||||||| |||||| |||||||||||||    
T  1822012 taaataaaaaaaaataagttaagggacgtgtttgagaaagttaaaatttataggacaaaattgaataaaaaaaataaattaaggaaccgac 1821922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 25181596 - 25181497
Alignment:
Q  148 agaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagccaaaa 247  Q
    ||||||||||||||||| ||||||||||||||||||||||||   || ||||| ||||||||||||||||||||| |||| |  ||||||||||| ||||    
T  25181596 agaaataagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcaaaaa 25181497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 47533088 - 47532973
Alignment:
Q  112 gattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaa 211  Q
    |||||||||||||||||||| | ||| ||||||||| ||||||| |||||| | |||||||| |||||||||| |||||| || ||||| ||||||| ||    
T  47533088 gattaaaattatcaaaattgaatcaaattgaataaatgaaataatttaaggaacgtgtttgataaagttaagatttatgagaccaaattgaataaaaaaa 47532989  T
Q  212 ataagttaaggaaccg 227  Q
    |||| |||||| ||||    
T  47532988 ataacttaagggaccg 47532973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 21203214 - 21203124
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaatt 130  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||       ||||||||| |||||| ||||||    
T  21203214 ataaattaggtgttgatgatacactataaaatctgatagacctttgtaatccaacggtctctttttttaggggattagaattatgaaaatt 21203124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18820669 - 18820632
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18820669 ttcttccctcatcttcatcttcattcaaccttcatcaa 18820632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 52761607 - 52761654
Alignment:
Q  196 aaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||||    
T  52761607 aaattgaataaaagaaataagttaaggaaccggcatatcaattaagcc 52761654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 18820806 - 18820858
Alignment:
Q  175 aaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    |||||||||| |||||| || ||||| ||||||||||||||||||||| ||||    
T  18820806 aaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccg 18820858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 49619736 - 49619779
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctc 83  Q
    |||||| ||||||||||||||||| || ||||||||||||||||    
T  49619736 ataaatcaggtgttggtgatacacagttaaatctgatagacctc 49619779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1822129 - 1822167
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaac 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  1822129 ttcttccctcatctccatcttcatacaaccttcatcaac 1822167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 25181553 - 25181520
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaaggga 164  Q
    ||||||| ||||||||||||||||||||||||||    
T  25181553 ggaccaaattgaataaaagaaataagttaaggga 25181520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 18820823 - 18820855
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaaggga 164  Q
    |||||| ||||||||||||||||||||||||||    
T  18820823 gaccaaattgaataaaagaaataagttaaggga 18820855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 42 - 247
Target Start/End: Original strand, 35202 - 35407
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||| ||||||||||||| |||    
T  35202 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 35301  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    | ||||||||||||||| ||||| |||||||||||||||||||||||||  || ||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  35302 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaag 35401  T
Q  242 ccaaaa 247  Q
    ||||||    
T  35402 ccaaaa 35407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 243
Target Start/End: Complemental strand, 31234 - 31033
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||        |||||||||||||||| |||| |||||||| |||    
T  31234 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 31135  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    | ||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  31134 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31035  T
Q  242 cc 243  Q
    ||    
T  31034 cc 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 42 - 247
Target Start/End: Complemental strand, 79610 - 79405
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||| ||||||||||||| |||    
T  79610 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 79511  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    | ||||||||||||||| ||||| |||||||||||||||||||||||||  || ||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  79510 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaag 79411  T
Q  242 ccaaaa 247  Q
    ||||||    
T  79410 ccaaaa 79405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 243
Target Start/End: Original strand, 83578 - 83779
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||        |||||||||||||||| |||| |||||||| |||    
T  83578 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 83677  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    | ||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  83678 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 83777  T
Q  242 cc 243  Q
    ||    
T  83778 cc 83779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 9e-64; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 40 - 256
Target Start/End: Original strand, 34996676 - 34996892
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||        ||| |||||||||||||||||||||||||| |    
T  34996676 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtctgtttttttaggagattaaaattatcaaaattggaccaaat 34996775  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||  |||||||| ||||||||||||||||| ||| ||||||  ||||||||    
T  34996776 tgaataaaagaaataagttaagggacgtatttgagaaagttaagacttatgggactaaattgaataaaagaaataagttcagggaccgacaaatcaatta 34996875  T
Q  240 agccaaaattcattaat 256  Q
    || | ||||| ||||||    
T  34996876 agtctaaattaattaat 34996892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 32348952 - 32349155
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  32348952 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 32349051  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||| | || ||||| |||||||||||||| |||||| |||| |  ||||||||    
T  32349052 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataagaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 32349151  T
Q  240 agcc 243  Q
    ||||    
T  32349152 agcc 32349155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 32713798 - 32713977
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |       |||||||||||||||||||||||||||||| |    
T  32713798 ataaattaggtgttggtgatacactgtaaaatcttatagacctccgtaatccaacggtcactttttttaggggattaaaattatcaaaattggaccaaat 32713897  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagtta 219  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||| | ||||||||||||||||||    
T  32713898 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatggaaccaaactgaataaaagaaataagtta 32713977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 3000708 - 3000912
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||| |||||||||| |||||||||||||||||  ||||||||||| |||        ||||||||||||||||||||||||||| || |    
T  3000708 ataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacgatctgtgtttttaggggattaaaattatcaaaattggactaaat 3000807  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||  || ||||| ||||||||||||||||||||| ||||||  ||||||||    
T  3000808 tgaataaaagaaataagttaagggaggtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacaaatcaatta 3000907  T
Q  240 agcca 244  Q
    |||||    
T  3000908 agcca 3000912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 11801257 - 11801460
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||  ||||||||| |||||| ||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  11801257 ataaattaggtgttaatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaaattggaccaaat 11801356  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||   || ||||| |||||||||||||| |||||| |||| |  ||||||||    
T  11801357 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 11801456  T
Q  240 agcc 243  Q
    ||||    
T  11801457 agcc 11801460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 244
Target Start/End: Complemental strand, 34995554 - 34995351
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||||        |||||||||||||||| ||||||||||||| |    
T  34995554 ataaattagatgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttaggggattaaaattattaaaattggaccaaat 34995455  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| | ||||||  ||||||||    
T  34995454 tgaataaaagaaataagttaaag-acgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaaggaccgacagatcaatta 34995356  T
Q  240 agcca 244  Q
    |||||    
T  34995355 agcca 34995351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 32348011 - 32347808
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||| | ||||||||||| ||||       |||||||||||||||||||||||||||||| |    
T  32348011 ataaattaggtgttgatgatacactataaaatctgatagacccccgtaatccaacgttctctttttttaggggattaaaattatcaaaattggaccaaat 32347912  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||||||   || ||||| |||||||||||||| ||||||||||  |  ||||||||    
T  32347911 tgaataaaagaaatcacttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaaggaaccagcagatcaatta 32347812  T
Q  240 agcc 243  Q
    ||||    
T  32347811 agcc 32347808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 18573087 - 18572885
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| || ||       ||||||||||||||||||||||||| ||||||    
T  18573087 ataaattatgtgttggtgatacactgtaaaatttgatagacctccgtaatccaacagtgtctttttt-aggggattaaaattatcaaaattggcccaatt 18572989  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||  || ||||| ||||||||||||||||||| | |||| |  ||||||||    
T  18572988 tgaataaaagaaataagttaagggacgtttttaagaaagttaagacttatgggaccaaattgaataaaagaaataagttaacggaccggcagatcaatta 18572889  T
Q  240 agcc 243  Q
    ||||    
T  18572888 agcc 18572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 32712558 - 32712358
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||| ||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  32712558 ataagttaggtgttggtggtacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 32712459  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||| || || |||||||||  ||||| ||||   || ||| | ||||||||||||||||||||| ||||||  ||||||||    
T  32712458 tgaataaaagaaataagttaagagacgtatttgagaaatgtaagatttataggaccaaactgaataaaagaaataagttaagggaccgacagatcaatta 32712359  T
Q  240 a 240  Q
    |    
T  32712358 a 32712358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 243
Target Start/End: Original strand, 29479122 - 29479312
Alignment:
Q  45 ttaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaat 144  Q
    |||||||||||||||||||||||||        ||||||||||||||||| |||||       |||||||| ||||||| ||||||||||||| ||||||    
T  29479122 ttaggtgttggtgatacactgtaaa--------gacctctgtaatccaactgtctcttttcgtaggggattgaaattattaaaattggaccaaattgaat 29479213  T
Q  145 aaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||||||| ||| ||| ||||||||||||| |||||||  || | ||| |||||||||||||| |||||| | || |  ||||||||||||    
T  29479214 aaaagaaataagttaaaggacgtgattgagaaagttaaaacttatgggaccagattgaataaaagaaataatttaagggatcggcagatcaattaagcc 29479312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 19383070 - 19383262
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||   ||||||||||||||||       |||| |||||||||||||||||| || ||| |    
T  19383070 ataaattagatgttg-tgatacactataaaatctgatagaccatcgtaatccaacggtctcttttt--agggcattaaaattatcaaaattagatcaaat 19383166  T
Q  140 tgaataaaagaaa--taagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaat 237  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||||||||       |||| ||||||||||||||||||||| |||| || ||||||    
T  19383167 tgaataaaaaaaaaataagttaagggacgtgtttgagaaagttaagacttat-------aattgaataaaagaaataagttaagggaccggcggatcaat 19383259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 18574299 - 18574416
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacg 230  Q
    ||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||| ||||| |||||||||||||||| |||| |||| |     
T  18574299 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatggaaccaaattgaataaaagaaataagtcaagggaccggca 18574398  T
Q  231 tatcaattaagccaaaat 248  Q
     |||||||||||||||||    
T  18574399 gatcaattaagccaaaat 18574416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 27719938 - 27719846
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattgga 133  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||       ||||||||||||| ||||||||||||    
T  27719938 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctc-ttttttaggggattaaaatcatcaaaattgga 27719846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 21094608 - 21094506
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||       ||||||||||| |||||||||||||| ||| |    
T  21094608 ataaattaggtgttggtgatacactataaaatctagtagacctccgtaatccaacggtctctttttttaggggattaaagttatcaaaattggatcaaat 21094509  T
Q  140 tga 142  Q
    |||    
T  21094508 tga 21094506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 21095294 - 21095348
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaac 94  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  21095294 ataaattaggtgttggtgatacactataaaatctggtagacctccgtaatccaac 21095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 29477827 - 29477757
Alignment:
Q  175 aaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagccaa 245  Q
    |||||||||| |||||| || ||||| ||||||||||||||||||||| |||| |  ||||||||||||||    
T  29477827 aaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagccaa 29477757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29477964 - 29478001
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29477964 ttcttccctcatcttcatcttcattcaaccttcatcaa 29478001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 7628526 - 7628469
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtct 99  Q
    ||||||||||||||||||||||||| ||||||| |||| |||  ||||| ||||||||    
T  7628526 aaattaggtgttggtgatacactgtgaaatctggtagatctccataatctaacggtct 7628469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18574213 - 18574176
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  18574213 ttcttccctcatcctcatcttcattcaaccttcatcaa 18574176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 682480 - 682516
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  682480 ttcttccctcatcttcatcttcatacaaccttcatca 682516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32712570 - 32712607
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  32712570 ttcttccctcatcttcatctacattcatccttcatcaa 32712607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 13562214 - 13562250
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgat 76  Q
    ||||||||||||||||||||||||||| | |||||||    
T  13562214 ataaattaggtgttggtgatacactgttagatctgat 13562250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 29477810 - 29477778
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaaggga 164  Q
    |||||| ||||||||||||||||||||||||||    
T  29477810 gaccaaattgaataaaagaaataagttaaggga 29477778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34995569 - 34995605
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||||||||| |||||| |||||||||    
T  34995569 ttcttccctcatcttcatctgcattcatccttcatca 34995605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 9e-64; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 40 - 244
Target Start/End: Complemental strand, 16602928 - 16602724
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||          ||||||||||||||||||||||||||||||    
T  16602928 ataaattaggtgttggtgatacactgtaaaatctgatagacatccgtaatccaacggtcttttttttttagggattaaaattatcaaaattggaccaatt 16602829  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    | ||||||||||||||||||||||| |||||||||||||||||||||||||  || ||||| |||||||||||||| |||||| ||||||  ||||||||    
T  16602828 taaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccgacagatcaatta 16602729  T
Q  240 agcca 244  Q
    |||||    
T  16602728 agcca 16602724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 27892251 - 27892454
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||  |||||| ||||||||            |||||||||||||||||||||| ||| |    
T  27892251 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttttttgattaaaattatcaaaattggatcaaat 27892350  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  27892351 tgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 27892450  T
Q  240 agcc 243  Q
    ||||    
T  27892451 agcc 27892454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 38243870 - 38244073
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||||||| |||||||||||||||| ||| |||| ||||||||||| || ||       ||| |||||||||||||||||||||||||| |    
T  38243870 ataaatttggtgttggtaatacactgtaaaatcttatacacctttgtaatccaacagtatctttttttaggagattaaaattatcaaaattggaccaaat 38243969  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||  || ||| | |||||||||||||| |||||| ||||||  ||||||||    
T  38243970 tgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaaataaattaagggaccgacagatcaatta 38244069  T
Q  240 agcc 243  Q
    ||||    
T  38244070 agcc 38244073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 244
Target Start/End: Complemental strand, 23833165 - 23832967
Alignment:
Q  45 ttaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaat 144  Q
    |||||||||| ||||||||| ||||||||  |||||||| |||||||||||||||        ||||||||||||||||||||||||||| || ||||||    
T  23833165 ttaggtgttgatgatacactataaaatcttctagacctccgtaatccaacggtcttcttttttaggggattaaaattatcaaaattggactaaattgaat 23833066  T
Q  145 aaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcca 244  Q
    |||| ||| ||||||||| | |||||||||||||||||||||||||  || ||||  ||||||| ||||||||||||| ||||||  |||||||||||||    
T  23833065 aaaataaaaaagttaagg-acgtgtttgagaaagttaagacttatgggaccaaatggaataaaataaataagttaagggaccgacaaatcaattaagcca 23832967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 27891309 - 27891106
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||||||||| |||||||||||||| |  |||||| ||||||||             ||||||||||||||||||| |||||      
T  27891309 ataaattaggtgttggtgatacactggaaaatctgatagacattcgtaatctaacggtctgttttttttttttattaaaattatcaaaattgaaccaaaa 27891210  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  27891209 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacctatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 27891110  T
Q  240 agcc 243  Q
    ||||    
T  27891109 agcc 27891106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 65 - 241
Target Start/End: Complemental strand, 26388396 - 26388220
Alignment:
Q  65 gtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaaggga 164  Q
    ||||||||||||||||||| |||||| ||||||||        | |||||||||||||||||||||| | ||| || ||||||||||||||||||| |||    
T  26388396 gtaaaatctgatagacctccgtaatcaaacggtctttttttatatgggattaaaattatcaaaattgaatcaaattaaataaaagaaataagttaaagga 26388297  T
Q  165 tgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
     |||||||||||||||||||||||||| |  ||||| ||||||| ||||||||||||  ||||||  ||||||||||    
T  26388296 cgtgtttgagaaagttaagacttatgagatcaaattgaataaaaaaaataagttaagagaccgacagatcaattaag 26388220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 43814625 - 43814519
Alignment:
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||  |||||||    
T  43814625 ttgaataaaagaaataagttaaaggacgtatttgagaaagttaagacttatgagacgaaattgaataaaagaaataagttaagggaccgacaaatcaatt 43814526  T
Q  239 aagccaa 245  Q
    |||||||    
T  43814525 aagccaa 43814519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 16604195 - 16604291
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    ||||||| |||||||||||||||||||| ||||| ||| |||||||| ||||||||||||  || ||||| ||||||||||||||||||||| ||||    
T  16604195 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaacttaagacttatgggaccaaattgaataaaagaaataagttaagggaccg 16604291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 38243083 - 38242944
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||||||||||||| | |||||||| |||   || |||||||||||||||||       ||| |||||||||||||||||||||| ||| |    
T  38243083 ataaatttggtgttggtgatacattataaaatcttata---ctttgtaatccaacggtctctttttttaggagattaaaattatcaaaattggatcaaat 38242987  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaa 182  Q
    | |||||||||||||||||||| ||  ||||||| ||||||||    
T  38242986 taaataaaagaaataagttaagagacatgtttgaaaaagttaa 38242944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 23833898 - 23833988
Alignment:
Q  153 taagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||| |||||||||||||||||||||||||  |  ||||| ||||||||||||||||||||| |||| |  ||||||||||||    
T  23833898 taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 23833988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 5034846 - 5034934
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||||||||||||||||||| | ||||  ||| ||||||||||||||||||||||||| | |||| |  ||||||||||||    
T  5034846 agttaagggatgtgtttgagaaagttaaaagttatagaaccaaattaaataaaagaaataagttaaaggaccggcaaatcaattaagcc 5034934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 44801073 - 44800983
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattgg 132  Q
    |||| |||||||||||||||||||| ||||||| || |||||| ||||||||||||||        |||||||| ||||||||||||||||    
T  44801073 aaatcaggtgttggtgatacactgtgaaatctggtaaacctctataatccaacggtcttgttttttaggggattgaaattatcaaaattgg 44800983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16604109 - 16604072
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16604109 ttcttccctcatcttcatcttcattcaaccttcatcaa 16604072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 5033566 - 5033476
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagccaa 245  Q
    ||||||||||||| |||||||||||||| | ||||   || ||||| ||||||||||||||||||| | || |||  ||| ||||||||||    
T  5033566 agttaagggatgtatttgagaaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggactgacagatctattaagccaa 5033476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 5034750 - 5034810
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    |||||| | |||||||||||||||| ||||||||| ||||||||| | |||||||| ||||    
T  5034750 ataaatcaagtgttggtgatacactctaaaatctgttagacctctcttatccaacgatctc 5034810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 29505104 - 29505053
Alignment:
Q  258 atacgtatacttttgctggcaaattcattaattatgaaaaatatcccactat 309  Q
    |||| |||||||||||||| || |||||| || |||||||||||||||||||    
T  29505104 atacttatacttttgctggaaagttcattgatgatgaaaaatatcccactat 29505053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 19577359 - 19577428
Alignment:
Q  158 taagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    |||||||||| ||||  |||||||||| |||||  || ||||| | ||||||||||||||||||| ||||    
T  19577359 taagggatgtctttgttaaagttaagagttatgggaccaaattgactaaaagaaataagttaagggaccg 19577428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26388422 - 26388459
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  26388422 ttcttccctcatcttcatctacattcatccttcatcaa 26388459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 5033662 - 5033602
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    ||||||||  ||||||||||||||| ||||||||| |||| |||| | |||||||| ||||    
T  5033662 ataaattaaatgttggtgatacactataaaatctggtagatctctcttatccaacgatctc 5033602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 12365936 - 12365996
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    |||||| ||||||||||||||||| || | |||||||||| |||  | |||||||||||||    
T  12365936 ataaatcaggtgttggtgatacacagttatatctgatagatctcatttatccaacggtctc 12365996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27892236 - 27892200
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||||||||| |||||| |||||||||    
T  27892236 ttcttccctcatcttcatctacattcatccttcatca 27892200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 22622070 - 22621867
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  22622070 ataaattcggtgtcggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 22621971  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| || | |  ||||||||    
T  22621970 tgaataaaagaaataagtaaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggactggcagatcaatta 22621871  T
Q  240 agcc 243  Q
    ||||    
T  22621870 agcc 22621867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 40 - 245
Target Start/End: Original strand, 38032335 - 38032540
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  38032335 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 38032434  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||   || ||||| |||||||||||||| |||||| |||| |  ||||||||    
T  38032435 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 38032534  T
Q  240 agccaa 245  Q
    ||||||    
T  38032535 agccaa 38032540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 8815272 - 8815475
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| |        || |||||||||||||||||||||||||||||    
T  8815272 ataaatttggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtttttttttttagaggattaaaattatcaaaattggaccaatt 8815371  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| | |||| |  ||||||||    
T  8815372 tgaatagaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaacggaccggcaaatcaatta 8815471  T
Q  240 agcc 243  Q
    ||||    
T  8815472 agcc 8815475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 40 - 222
Target Start/End: Original strand, 34095574 - 34095756
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||       |||||||||||||||||||||||||||||| |    
T  34095574 ataaattaggtgtgggtgatacactataaaatctgatagacctccgtaattcaacggtctccttttttaggggattaaaattatcaaaattggaccaaat 34095673  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||| |||||||||||||    
T  34095674 tgaacaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataagttaagg 34095756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 46 - 243
Target Start/End: Complemental strand, 17356558 - 17356361
Alignment:
Q  46 taggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaata 145  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||| ||| |||||||    
T  17356558 taggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaacaaattgaata 17356459  T
Q  146 aaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||  |  ||||| ||||||||||||||||||||| ||||||  ||||||||||||    
T  17356458 aaagaaataagttaagggacgtgtttgagaaagttaagatttctggcatcaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 17356361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 18091783 - 18091580
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||       | | ||||||||||||||||||||||| || |    
T  18091783 ataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaattatcaaaattggactaaat 18091684  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||| | ||||||||| ||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | || |  ||||||||    
T  18091683 tgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcggcagatcaatta 18091584  T
Q  240 agcc 243  Q
    ||||    
T  18091583 agcc 18091580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 40 - 227
Target Start/End: Original strand, 7261458 - 7261645
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| |||||||| ||||||||  ||||||||| |||||        |||||||||||||||||||||||||||||| |    
T  7261458 ataaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaatggtctatttttttaggggattaaaattatcaaaattggaccaaat 7261557  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccg 227  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||  |  ||||| ||||||||||||||||||||| ||||    
T  7261558 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccg 7261645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 244
Target Start/End: Complemental strand, 10803092 - 10802888
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||| ||||||||||||||| | |||||||||||| ||||| ||||||||||||||||       |||| ||||||||||||||||||||||||| |    
T  10803092 ataaattcggtgttggtgatacaatataaaatctgataaacctccgtaatccaacggtctctttttttagggtattaaaattatcaaaattggaccaaat 10802993  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | |||||  || ||||| ||||||||||||||||||||| | || |  ||||||||    
T  10802992 tgaataaaagaaataagttaagggacgtgtttgagaaagttaaaatttatgggaccaaattgaataaaagaaataagttaagggatcggcagatcaatta 10802893  T
Q  240 agcca 244  Q
    |||||    
T  10802892 agcca 10802888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 42 - 222
Target Start/End: Complemental strand, 48499565 - 48499385
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||| |||    
T  48499565 aaattagatgttggtgatacaccgtaaaatctgatagacctctgtaatccaacgatctctttttttaggggattaaaattatcaaaattggaccaaattg 48499466  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    ||||||| |||||||||||||||  ||||||| |||||||||| |||||  || ||||| |||||||||||||||||||||    
T  48499465 aataaaataaataagttaagggacatgtttgaaaaagttaagaattatgggaccaaattgaataaaagaaataagttaagg 48499385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 38031371 - 38031168
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||        | |||||||||||||||||||||||||||| |    
T  38031371 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaattcaacggtctttttttttatgggattaaaattatcaaaattggaccaaat 38031272  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||   || ||||| |||||||||||||| |||||| |||| |  ||||||||    
T  38031271 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 38031172  T
Q  240 agcc 243  Q
    ||||    
T  38031171 agcc 38031168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 40 - 212
Target Start/End: Original strand, 22623058 - 22623230
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |    
T  22623058 ataaattagatgttggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttgtaggggattaaaattatcaaaattggaccaaat 22623157  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaa 212  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||||||  || ||||| |||||||||||    
T  22623158 tgaataaaagaaataagtaaagggacgtgcttgagaaagttaagacttatgggaccaaattgaataaaagaaa 22623230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 8814337 - 8814135
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||        |||| |||||||||||||||||| |||||| |    
T  8814337 ataaattaggtgttggtgttacactataaaatctgatagacctccgtaatccaacagtct-attttttagggtattaaaattatcaaaattcgaccaaat 8814239  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||||  |||||||||||| ||||| |||||  |||||||| ||||||||||||||||||||| |||||   ||||||||    
T  8814238 tgaataaaagaaataagttaagggacatgtttgagaaagataagatttatgggactaaattgaataaaagaaataagttaagggaccgatagatcaatta 8814139  T
Q  240 agcc 243  Q
    ||||    
T  8814138 agcc 8814135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 23757885 - 23758088
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaat- 138  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||        | ||||||||||||||||||||||| |||      
T  23757885 ataaattaggtgttggtgatacaccataaaatctgatagacctccgtaattcaacggtctctttttttggaggattaaaattatcaaaattggatcaaaa 23757984  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    || ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||| |||| |||||| |  |||||||    
T  23757985 tttaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagactaaattgaataaaagaaataaattaaagaaccggcagatcaatt 23758084  T
Q  239 aagc 242  Q
    ||||    
T  23758085 aagc 23758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 53 - 243
Target Start/End: Complemental strand, 35192007 - 35191817
Alignment:
Q  53 tggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaataaaagaaa 152  Q
    ||||| |||||| |||||| |||||||| || ||||||||||| ||||       |||||||||||||||||||||||| || || ||||||||||||||    
T  35192007 tggtggtacactataaaatttgatagacttccgtaatccaacgttctctttttttaggggattaaaattatcaaaattgaactaaattgaataaaagaaa 35191908  T
Q  153 taagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||| | | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| || ||||||||||||    
T  35191907 taagttaatgaacgtgtttgagaaagttaagacttatgaaaccaaattgaataaaagaaataagttaagggaccggcgaatcaattaagcc 35191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 17357778 - 17357978
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||| || ||| ||||||| | ||||||||| |||||||| ||||| ||||||||||       ||| |||||||||||||||||||||| ||  |    
T  17357778 ataaattaagtattgctgatacattataaaatctggtagacctccgtaattcaacggtctcttttttcaggagattaaaattatcaaaattggatcatat 17357877  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  17357878 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 17357977  T
Q  240 a 240  Q
    |    
T  17357978 a 17357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 10804110 - 10804313
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||        || ||||||||||||||||||||| ||||| |    
T  10804110 ataaattaggcgttgatgatacactgtaaaatctgatagacctccgtaatccaacggtctttttttttagtggattaaaattatcaaaattgaaccaaat 10804209  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||||| |  | ||| |||||||||| ||||||   || ||||| ||||||||||||||||||||| |||| |  ||||||||    
T  10804210 tgaataaaagaaataagttaaggaacttatttaagaaagttaaaacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 10804309  T
Q  240 agcc 243  Q
    ||||    
T  10804310 agcc 10804313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 48501239 - 48501437
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||| ||||||||  |||||||||| ||||||| |||||| |||||||||       ||||||||||||| || |||||| |||||| |    
T  48501239 ataaattaggtgttgatgatacacaataaaatctgacagacctccgtaatctaacggtctctttttttaggggattaaaat-attaaaattagaccaaat 48501337  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    ||||||||||||||||||||| |||  |||||||||||||||||| |||||||||  |||| ||||||||||||||||||| ||||||||  ||||||||    
T  48501338 tgaataaaagaaataagttaaaggacatgtttgagaaagttaagaattatgaaacctaattgaataaaagaaataagttaaagaaccgacagatcaatta 48501437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 69 - 222
Target Start/End: Original strand, 35193140 - 35193293
Alignment:
Q  69 aatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtg 168  Q
    ||||||||||||||| ||||||||||||||||       ||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||    
T  35193140 aatctgatagacctccgtaatccaacggtctctttttctaggggattaaaattatcaaaaatggaccaaattgaataaaagaaataagttaaaggacgtg 35193239  T
Q  169 tttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    |||||||||||||||  |||||| || ||||| |||||||||||||| ||||||    
T  35193240 tttgagaaagttaagttttatgagaccaaattgaataaaagaaataaattaagg 35193293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 56233859 - 56233739
Alignment:
Q  108 aggggattaaaattatcaaaattggaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaa 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||| |||||||||  || ||||| ||||||    
T  56233859 aggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttgagacttatgcgaccaaattgaataaa 56233760  T
Q  208 agaaataagttaaggaaccga 228  Q
    ||||||||||||||| |||||    
T  56233759 agaaataagttaagggaccga 56233739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 56234936 - 56235138
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||| | |||||||||||||||||  ||||| ||  |||||        || ||||||||| |||||||||| |||| | |    
T  56234936 ataaattaggtgttggtgatacattataaaatctgatagaccttcgtaattcattggtct-gttttttagaggattaaaagtatcaaaattagaccgaat 56235034  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatta 239  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| |  ||||| |||||||||||||| |||||| || |||  ||||||||    
T  56235035 tgaataaaagaaataagttaaggggtgtgtttgataaagttaagacttatgagatcaaattgaataaaagaaataaattaagggactgacagatcaatta 56235134  T
Q  240 agcc 243  Q
    ||||    
T  56235135 agcc 56235138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 220
Target Start/End: Original strand, 5433322 - 5433502
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||| |||||||| | |||||||||||||||||| ||||| |||| |||||       |||| |||||||||||||||||||||  || |    
T  5433322 ataaattaggtgtttgtgatacattataaaatctgatagacctccgtaatacaacagtctcaatttttagggtattaaaattatcaaaattggagtaaat 5433421  T
Q  140 tgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaa 220  Q
    ||||||||| ||||||||||||| |  |||||||||||||||| ||||||   || ||||| |||||||||||||||||||    
T  5433422 tgaataaaataaataagttaaggcacatgtttgagaaagttaaaacttataggaccaaattgaataaaagaaataagttaa 5433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 48080374 - 48080270
Alignment:
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    |||||||||||||||||||||| |||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||  |||||||    
T  48080374 ttgaataaaagaaataagttaaaggacaagtttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagtgaccgacagatcaatt 48080275  T
Q  239 aagcc 243  Q
    |||||    
T  48080274 aagcc 48080270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 48081597 - 48081705
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgt 231  Q
    |||||| ||||||||||||||||||||||||||  | ||||| |||||||||||||||| ||| ||||| |||||||| |||||||||||| ||||||      
T  48081597 gaccaaattgaataaaagaaataagttaagggacatatttgaaaaagttaagacttatggaaccaaattgaataaaaggaataagttaagggaccgacac 48081696  T
Q  232 atcaattaa 240  Q
    |||||||||    
T  48081697 atcaattaa 48081705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 34122827 - 34122920
Alignment:
Q  150 aaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||| |||||||||||||||||||||||||||||| |||||  || ||||| ||||||||||||||||||||| ||||||  ||||||||||||    
T  34122827 aaatgagttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 34122920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 48081552 - 48081627
Alignment:
Q  147 aagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  48081552 aagaaataacttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagg 48081627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 34121387 - 34121299
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||| |||| |  ||||||||||||    
T  34121387 agttaagtgatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 34121299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 48463014 - 48463102
Alignment:
Q  155 agttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaagcc 243  Q
    |||||||||||||||||||||||||||| |||||||| || ||||| ||||||||||||||||||||| |||  |  ||||||||||||    
T  48463014 agttaagggatgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcc 48463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 222
Target Start/End: Original strand, 36074709 - 36074891
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattat-caaaattggaccaat 138  Q
    ||||||||||||||||||||||||| |||||| ||||||||||  ||||||||||| |||        | | |||||||| |||  |||||| ||||||     
T  36074709 ataaattaggtgttggtgatacactataaaatatgatagaccttcgtaatccaacgatct--ttttttatgagattaaaaatataaaaaattagaccaaa 36074806  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaa-agttaagacttatgaaactaaattaaataaaagaaataagttaagg 222  Q
    |||||||||| ||||||||||||| | ||| ||||||| |||||| | |||||  |||||||| ||||||| ||||||| |||||    
T  36074807 ttgaataaaaaaaataagttaaggaacgtgcttgagaagagttaaaatttatgggactaaattgaataaaataaataagataagg 36074891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 35927031 - 35927133
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    ||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||| |||        ||| |||||||||||||||||||||| ||| |    
T  35927031 ataaattaggtgttggtgatacactataaaatctggtagaccttcgtaatccaacgatctttttttttaggagattaaaattatcaaaattggatcaaat 35927130  T
Q  140 tga 142  Q
    |||    
T  35927131 tga 35927133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 35925894 - 35925835
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtct 99  Q
    |||||||||||||||  |||||||| |||||||||||||| ||| |||||||||| ||||    
T  35925894 ataaattaggtgttgacgatacactataaaatctgatagatctccgtaatccaacagtct 35925835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37642438 - 37642401
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  37642438 ttcttccctcatcttcatcttcatacaaccttcatcaa 37642401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 48081295 - 48081355
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    ||||||||||||||||||||||| | |||| ||| |||||  |||| ||||||||||||||    
T  48081295 ataaattaggtgttggtgatacagtataaactctcatagatatctggaatccaacggtctc 48081355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 17356579 - 17356613
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcat 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  17356579 ttcttccctcatcttcatcttcattcatccttcat 17356613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 48081482 - 48081536
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaac 94  Q
    ||||||||||||||||||||||| | |||| ||||| ||||||| | ||||||||    
T  48081482 ataaattaggtgttggtgatacattataaactctgaaagacctccgcaatccaac 48081536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 5574244 - 5574195
Alignment:
Q  199 ttaaataaaagaaataagttaaggaaccgacgtatcaattaagccaaaat 248  Q
    ||||||||||||| |||||||||| ||||  | |||||||||||||||||    
T  5574244 ttaaataaaagaattaagttaagggaccggaggatcaattaagccaaaat 5574195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8815251 - 8815214
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  8815251 ttcttccctcatcttcatctacattcatccttcatcaa 8815214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 34122868 - 34122901
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaaggga 164  Q
    ||||||| ||||||||||||||||||||||||||    
T  34122868 ggaccaaattgaataaaagaaataagttaaggga 34122901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22622082 - 22622118
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||||||||| |||||| |||||||||    
T  22622082 ttcttccctcatcttcatctacattcatccttcatca 22622118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35192034 - 35192070
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  35192034 ttcttccctcatctccatcttcatacaaccttcatca 35192070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 48463051 - 48463083
Alignment:
Q  132 gaccaatttgaataaaagaaataagttaaggga 164  Q
    |||||| ||||||||||||||||||||||||||    
T  48463051 gaccaaattgaataaaagaaataagttaaggga 48463083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 54372944 - 54372884
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    |||||| ||||||||||||||||| || | |||| |||||||||  | |||||||||||||    
T  54372944 ataaatcaggtgttggtgatacacagttagatctaatagacctcatttatccaacggtctc 54372884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 42 - 243
Target Start/End: Original strand, 1518 - 1719
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||        | |||||||||||||||||||||||||||| |||    
T  1518 aaattaggtgttggttatacaccgtaaaatctgatagacctctataatccaacggtctgtttttttaagggattaaaattatcaaaattggaccaaattg 1617  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    |||||| ||||||| |||| ||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  1618 aataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 1717  T
Q  242 cc 243  Q
    ||    
T  1718 cc 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 42 - 243
Target Start/End: Complemental strand, 335 - 134
Alignment:
Q  42 aaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatttg 141  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       | || |||||||||||||||||| |||||| |||    
T  335 aaattaggtgttggtgatacgctgtaaaatctgatagacctctgtaatccaacggtctctttttttaaggaattaaaattatcaaaatttgaccaaattg 236  T
Q  142 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaattaag 241  Q
    |||||| ||||||| |||| ||| |||||||||||||||||||||||||  |  ||||| ||||||||||||||||||||| || | |  ||||||||||    
T  235 aataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggactggcagatcaattaag 136  T
Q  242 cc 243  Q
    ||    
T  135 cc 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 96; Significance: 5e-47; HSPs: 3)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 2941 - 3145
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnagg-ggattaaaattatcaaaattggaccaat 138  Q
    ||||||||||||||||||||||||| |||||||||||||||||  |||||| ||||||||            |||||||||||||||||||||||||||     
T  2941 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttttttggattaaaattatcaaaattggaccaaa 3040  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||  || ||||| ||||||||||||||||||||| || | |  |||||||    
T  3041 ttgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggactggcagatcaatt 3140  T
Q  239 aagcc 243  Q
    |||||    
T  3141 aagcc 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 1971 - 1848
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattggaccaatt 139  Q
    |||||||||||||||||||||||||| ||||||| |||||| |  |||||| ||||||||           ||||||||||||| ||||||||||||| |    
T  1971 ataaattaggtgttggtgatacactggaaaatctaatagacattcgtaatctaacggtctatattttttttggattaaaattat-aaaattggaccaaat 1873  T
Q  140 tgaataaaagaaataagttaaggga 164  Q
    |||||||||||||||||||||||||    
T  1872 tgaataaaagaaataagttaaggga 1848  T

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Target: scaffold0878; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2924 - 2888
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatca 37  Q
    |||||||||||||||||||| |||||| |||||||||    
T  2924 ttcttccctcatcttcatctacattcatccttcatca 2888  T

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Target: scaffold0018 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 25259 - 25464
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtc-tcnnnnnnnaggggattaaaattatcaaaattggaccaat 138  Q
    ||||||||||||||| | ||||||| |||||| ||||| ||||| |||||||||| ||| ||       |   ||||||||||||||||||||||||||     
T  25259 ataaattaggtgttgataatacactataaaatgtgataaacctccgtaatccaactgtcctcttgttttaaatgattaaaattatcaaaattggaccaaa 25358  T
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    || |||||||||||||| |||||||| |||||||||||||||||||||||||  || ||||| ||||||||||||||||||||| | || |  |||||||    
T  25359 tttaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggagcggcagatcaatt 25458  T
Q  239 aagcca 244  Q
    ||||||    
T  25459 aagcca 25464  T

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Target: scaffold0026 (Bit Score: 62; Significance: 9e-27; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 104405 - 104296
Alignment:
Q  139 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgaaactaaattaaataaaagaaataagttaaggaaccgacgtatcaatt 238  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |||||||  || ||||| ||||||||||||||||||||| |||| |  |||||||    
T  104405 ttgaataaaagaaataagttaagggacgtgtttgagaatgttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccgtcaaatcaatt 104306  T
Q  239 aagccaaaat 248  Q
    ||||| ||||    
T  104305 aagcctaaat 104296  T

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Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 104454 - 104405
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaat 89  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  104454 ataaattagatgttggtgatacactataaaatctgatagacctccgtaat 104405  T

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Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 104353 - 104320
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaaggga 164  Q
    ||||||| ||||||||||||||||||||||||||    
T  104353 ggaccaaattgaataaaagaaataagttaaggga 104320  T

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Target: scaffold0026; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 104469 - 104506
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  104469 ttcttccctcatcttcatctacattcatccttcatcaa 104506  T

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Target: scaffold0349 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 9360 - 9268
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctcnnnnnnnaggggattaaaattatcaaaattgga 133  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||       ||||||||||||| ||||||||||||    
T  9360 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctc-ttttttaggggattaaaatcatcaaaattgga 9268  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 98252 - 98289
Alignment:
Q  1 ttcttccctcatcttcatcttcattcaaccttcatcaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  98252 ttcttccctcatcttcatcttcatacaaccttcatcaa 98289  T

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Target: scaffold0081 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 42925 - 42967
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacct 82  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  42925 ataaattaggtgttggtgatacactgttaaatctcatggacct 42967  T

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Target: scaffold0035 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 21188 - 21155
Alignment:
Q  131 ggaccaatttgaataaaagaaataagttaaggga 164  Q
    ||||||||||||||||||||| ||||||||||||    
T  21188 ggaccaatttgaataaaagaattaagttaaggga 21155  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 35560 - 35500
Alignment:
Q  40 ataaattaggtgttggtgatacactgtaaaatctgatagacctctgtaatccaacggtctc 100  Q
    |||||||||||||||||||||||| || | |||||||| |||||  | |||||| ||||||    
T  35560 ataaattaggtgttggtgatacacagttagatctgataaacctcatttatccaatggtctc 35500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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