View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14704_low_14 (Length: 312)
Name: NF14704_low_14
Description: NF14704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14704_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 20 - 281
Target Start/End: Complemental strand, 8822326 - 8822065
Alignment:
| Q |
20 |
cttctgactcgccacggaggttgatgtcggtgacacggccggtggtggagtcgcaactaacgccgtaccagtttacgcagcagttttcgccggaccatgt |
119 |
Q |
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| T |
8822326 |
cttctgactcgccacggaggttgatgtcggtgacacggccggtggtggagtcgcaactaacgccgtaccagtttacgcagcagttttcgccggaccatgt |
8822227 |
T |
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| Q |
120 |
attgaagatgccgtggtagggttctttgagggatgctttgaaggataagagtgcggttctgtctgaaggagaacaaccgtgtacggtgagaatgacggtg |
219 |
Q |
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| T |
8822226 |
attgaagatgccgtggtagggttctttgagggatgctttgaaggataagagtgcggttctgtctgacggagaacaaccgtgtacggtgagaatgacggtg |
8822127 |
T |
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| Q |
220 |
gcgagaaaaacggttacgacggagaacgtgaatgaagaagccattggattgggttaagtgat |
281 |
Q |
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| T |
8822126 |
gcgagaaaaacggttacgacggagaacgtgaatgaagaagccattggattgggttaagtgat |
8822065 |
T |
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