View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14704_low_18 (Length: 267)
Name: NF14704_low_18
Description: NF14704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14704_low_18 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 3039642 - 3039892
Alignment:
| Q |
17 |
acttggtctcccactttaccctttttctaggacctttataaaaaattaaagattcttcatgatccttatgtttcactataatatctacctgggatcaata |
116 |
Q |
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| T |
3039642 |
acttggtctcccactttaccctttttctaggacctttataaaaaattaaagattcttcatgatccttatgttgcactataatatctacctgggatcaata |
3039741 |
T |
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| Q |
117 |
ccttaactaacatatataaagcatcatatcatgtttttatggtttgtcgagtttatataagaaattaattaattcatgtgtttcattttatttgtttgtt |
216 |
Q |
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| T |
3039742 |
ccttaactaacatatataaagcatcatatcatgtttttatggtttgtcgagtttatataagaaattaattaattcatgtgtttcattttatttgtttgtt |
3039841 |
T |
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| Q |
217 |
tagaatataaaagaaatggacttgctaaaaagttctaattcttactgcttt |
267 |
Q |
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| T |
3039842 |
tagaatataaaagaaatggacttgctaaaaagttcaaattcttactgcttt |
3039892 |
T |
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