View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14704_low_6 (Length: 343)
Name: NF14704_low_6
Description: NF14704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14704_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 12 - 326
Target Start/End: Complemental strand, 14346656 - 14346342
Alignment:
| Q |
12 |
caatataaaggaaacaatggcttaccatcatccctattcaaaagaaaataaggttcacctggaacagcccaaattttaaaaaacctagctttaaagtttt |
111 |
Q |
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| T |
14346656 |
caatataaaggaaacaatggcttaccatcatccttattcaaaagaaaataaggttcacctggaacagcccaaattttaaaaaacctagctttaaagtttt |
14346557 |
T |
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| Q |
112 |
tataagattgatcaaagctctccaacaattttcgacccggaataccattaatcgaaacccaacccacttgttttccaatcttaacctgnnnnnnncagaa |
211 |
Q |
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| T |
14346556 |
tataagattgatcaaagctctcaaacaattttcgacccggaataccattaatcgaaacccaacccacttgttttccaatcttaacctgaaaaaaacagaa |
14346457 |
T |
|
| Q |
212 |
aaacaaagcagcagacacttccaaaccataataggtaagaaggcattcgaaagcgcgagcaaaagcccaactgttaggatgaagttgagtcggagaaata |
311 |
Q |
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| T |
14346456 |
aaacaaagcagcagacacttccaaaccataataggtaagaaggcattcgaacgcgctagcaaaagcccaactgttaggatgaagttgagacggagaaata |
14346357 |
T |
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| Q |
312 |
ttcaaccagttcagt |
326 |
Q |
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| T |
14346356 |
ttcaaccagttcagt |
14346342 |
T |
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