View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14704_low_8 (Length: 335)
Name: NF14704_low_8
Description: NF14704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14704_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 9 - 335
Target Start/End: Complemental strand, 45699963 - 45699641
Alignment:
| Q |
9 |
tatgagttctttaatatacttgatttcttttttgaattcttctgagcaattatgaagaaatata----atacagttttccaaagtgctcatactctcgac |
104 |
Q |
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| T |
45699963 |
tatgagttctttaatatacttgatttcttttttgaattcttctgagcaattatgaagaaatatatataatacaattttccaaagtgctcatactctcgac |
45699864 |
T |
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| Q |
105 |
aatcttaggtgttatatttatatggtaggtaggtagatgcataacaaatgtatcaattctaattctaaatatggtggtacttctctatctgcccacgcta |
204 |
Q |
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| T |
45699863 |
aatcttaggtcttatatttatatggtagttag----atgcataacaaatgtatcaattctaattctaaatatggtggtacttctctatctgcccacgcta |
45699768 |
T |
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| Q |
205 |
tatatatattaattatctgaagtattgtgtttattattgttcttaggcaccatagattatagtaataatgataaaaagatgttgattgactgcttccaac |
304 |
Q |
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| T |
45699767 |
tatatat--taattatctgaagtattgtgtttattattgttcttaggcaccatagattatagtaataatgataaaaagatgttgattgactgcttccaac |
45699670 |
T |
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| Q |
305 |
aacctcctatatgtgtttctgctctgataaa |
335 |
Q |
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| T |
45699669 |
aacctcc--tatgtgtttctgctctgataaa |
45699641 |
T |
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