View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14705_low_12 (Length: 335)
Name: NF14705_low_12
Description: NF14705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14705_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 17894339 - 17894542
Alignment:
| Q |
1 |
actactacacttcttcatcctcctgagaaatctgtggataaaataagtaacaaagagaacaaacaaagaaggtgttagtacattcagatatgtgtttagt |
100 |
Q |
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| T |
17894339 |
actactacacttcttcatcctcctgagaaatctgtggataaaataagtaacaaagaaaacaaacaaagaaggtgttagtacattcagatatatgtttagt |
17894438 |
T |
|
| Q |
101 |
atttaaaattaaagtatatgaattagaattcataataatcatgtataaataataaaaacactcataattacatatattatctcttgttatataattcaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
17894439 |
atttaaaattaaagtatatgaattagaattcataataatcatatataaataataaaaacactcataattacatatattatctcttgttatctaattcaaa |
17894538 |
T |
|
| Q |
201 |
tgat |
204 |
Q |
| |
|
|||| |
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| T |
17894539 |
tgat |
17894542 |
T |
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