View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14705_low_30 (Length: 241)

Name: NF14705_low_30
Description: NF14705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14705_low_30
NF14705_low_30
[»] chr5 (34 HSPs)
chr5 (14-223)||(7160856-7161065)
chr5 (19-217)||(12084133-12084334)
chr5 (19-169)||(11181789-11181941)
chr5 (19-134)||(33030898-33031013)
chr5 (19-217)||(17003917-17004118)
chr5 (19-150)||(6741860-6741991)
chr5 (19-148)||(10281761-10281891)
chr5 (23-150)||(2630239-2630366)
chr5 (19-148)||(11916929-11917059)
chr5 (19-217)||(14520168-14520369)
chr5 (19-170)||(15464517-15464672)
chr5 (19-148)||(19588756-19588886)
chr5 (19-169)||(9353290-9353443)
chr5 (72-169)||(36932361-36932461)
chr5 (19-217)||(42127368-42127568)
chr5 (19-135)||(3880322-3880439)
chr5 (74-217)||(28832198-28832343)
chr5 (77-191)||(28537593-28537707)
chr5 (74-217)||(24553520-24553664)
chr5 (19-135)||(38192196-38192313)
chr5 (19-135)||(38219421-38219538)
chr5 (80-169)||(31300615-31300705)
chr5 (70-135)||(24135871-24135936)
chr5 (70-135)||(35387685-35387750)
chr5 (92-148)||(4410239-4410295)
chr5 (19-85)||(213486-213553)
chr5 (23-85)||(13695771-13695835)
chr5 (94-135)||(15044709-15044750)
chr5 (19-85)||(33831701-33831768)
chr5 (92-148)||(15552462-15552518)
chr5 (92-148)||(31179377-31179433)
chr5 (92-148)||(31542951-31543007)
chr5 (92-148)||(31545297-31545353)
chr5 (92-120)||(36263847-36263875)
[»] chr4 (38 HSPs)
chr4 (20-215)||(1983259-1983454)
chr4 (19-207)||(39774262-39774452)
chr4 (14-202)||(5112193-5112381)
chr4 (19-174)||(18377343-18377499)
chr4 (63-212)||(34495825-34495975)
chr4 (19-217)||(6743373-6743573)
chr4 (19-217)||(10047318-10047519)
chr4 (19-217)||(38152396-38152596)
chr4 (19-169)||(16623250-16623402)
chr4 (19-169)||(36315187-36315338)
chr4 (19-169)||(36329396-36329547)
chr4 (19-220)||(3796476-3796681)
chr4 (56-212)||(24333753-24333911)
chr4 (19-217)||(5396629-5396830)
chr4 (19-169)||(31985591-31985744)
chr4 (58-217)||(39245933-39246094)
chr4 (19-217)||(37781802-37782001)
chr4 (19-214)||(3777492-3777688)
chr4 (24-223)||(16630642-16630844)
chr4 (19-144)||(5143273-5143399)
chr4 (19-148)||(5147687-5147817)
chr4 (74-217)||(5269204-5269349)
chr4 (19-217)||(42599530-42599732)
chr4 (74-217)||(25862035-25862180)
chr4 (74-217)||(28468542-28468686)
chr4 (19-217)||(54867123-54867323)
chr4 (70-135)||(24741963-24742028)
chr4 (70-135)||(29760664-29760729)
chr4 (92-148)||(22132398-22132454)
chr4 (19-114)||(873476-873571)
chr4 (100-130)||(5336805-5336835)
chr4 (19-85)||(379401-379468)
chr4 (19-85)||(52467434-52467501)
chr4 (92-148)||(16931795-16931851)
chr4 (92-148)||(16934149-16934205)
chr4 (92-148)||(22780379-22780435)
chr4 (92-148)||(44599844-44599900)
chr4 (33-85)||(51337100-51337152)
[»] chr7 (30 HSPs)
chr7 (14-222)||(28617178-28617388)
chr7 (19-223)||(3047189-3047394)
chr7 (20-169)||(5817229-5817379)
chr7 (19-217)||(29159742-29159943)
chr7 (19-169)||(33332407-33332559)
chr7 (19-169)||(46516267-46516419)
chr7 (19-217)||(20284028-20284228)
chr7 (19-217)||(55887-56087)
chr7 (19-217)||(2647653-2647854)
chr7 (19-217)||(49091601-49091801)
chr7 (19-170)||(2479322-2479475)
chr7 (19-169)||(9189965-9190117)
chr7 (19-169)||(35960804-35960956)
chr7 (19-148)||(21983294-21983425)
chr7 (19-148)||(44848642-44848771)
chr7 (74-169)||(2580378-2580474)
chr7 (19-194)||(18408727-18408903)
chr7 (23-217)||(4796628-4796825)
chr7 (74-148)||(9185178-9185252)
chr7 (70-217)||(18413580-18413727)
chr7 (80-170)||(47263663-47263754)
chr7 (27-135)||(21639831-21639940)
chr7 (27-135)||(21646029-21646138)
chr7 (70-135)||(2057988-2058053)
chr7 (92-148)||(7351658-7351714)
chr7 (19-134)||(23402971-23403086)
chr7 (14-49)||(23565179-23565214)
chr7 (70-135)||(1533453-1533518)
chr7 (94-135)||(31109604-31109645)
chr7 (92-148)||(31155917-31155973)
[»] chr6 (25 HSPs)
chr6 (19-216)||(24435928-24436127)
chr6 (14-135)||(4629977-4630099)
chr6 (19-169)||(5572198-5572350)
chr6 (23-135)||(31076903-31077015)
chr6 (19-169)||(31979501-31979653)
chr6 (19-217)||(10077122-10077323)
chr6 (19-169)||(31086430-31086582)
chr6 (19-169)||(5757436-5757589)
chr6 (19-170)||(21356021-21356176)
chr6 (19-135)||(21801301-21801418)
chr6 (59-135)||(27165706-27165782)
chr6 (18-157)||(14521675-14521813)
chr6 (74-217)||(5017482-5017626)
chr6 (19-135)||(18232868-18232985)
chr6 (19-217)||(22963639-22963838)
chr6 (19-217)||(23824555-23824754)
chr6 (74-169)||(22709004-22709102)
chr6 (20-116)||(1115063-1115159)
chr6 (74-169)||(31936575-31936671)
chr6 (70-135)||(5674779-5674844)
chr6 (14-121)||(30518081-30518188)
chr6 (19-85)||(2973019-2973086)
chr6 (94-135)||(11856997-11857038)
chr6 (94-135)||(14742457-14742498)
chr6 (92-148)||(12195521-12195577)
[»] chr1 (34 HSPs)
chr1 (20-215)||(22819370-22819567)
chr1 (19-217)||(9023797-9023990)
chr1 (19-217)||(19072866-19073068)
chr1 (19-217)||(19120756-19120958)
chr1 (19-217)||(29651750-29651951)
chr1 (20-169)||(9476249-9476400)
chr1 (19-148)||(47703893-47704023)
chr1 (19-217)||(26644855-26645056)
chr1 (19-169)||(16124473-16124625)
chr1 (19-217)||(13598337-13598538)
chr1 (20-217)||(47102800-47102999)
chr1 (19-148)||(3281718-3281847)
chr1 (19-217)||(47098782-47098982)
chr1 (19-169)||(13604580-13604734)
chr1 (70-169)||(19361441-19361542)
chr1 (70-169)||(19380081-19380182)
chr1 (19-150)||(17345477-17345607)
chr1 (27-136)||(19358808-19358918)
chr1 (56-217)||(27104367-27104530)
chr1 (73-217)||(775611-775757)
chr1 (19-141)||(32736954-32737076)
chr1 (19-144)||(32889453-32889579)
chr1 (72-217)||(37069708-37069856)
chr1 (27-135)||(24202734-24202843)
chr1 (19-169)||(21536527-21536680)
chr1 (21-104)||(48382441-48382524)
chr1 (19-90)||(40816771-40816843)
chr1 (19-85)||(4552717-4552784)
chr1 (19-80)||(35109495-35109556)
chr1 (92-148)||(9459425-9459481)
chr1 (92-148)||(9463252-9463308)
chr1 (19-83)||(11032278-11032342)
chr1 (92-148)||(16226384-16226440)
chr1 (92-148)||(47177579-47177634)
[»] chr2 (43 HSPs)
chr2 (19-215)||(15903848-15904043)
chr2 (19-191)||(27149252-27149424)
chr2 (19-217)||(2869650-2869852)
chr2 (19-215)||(40014868-40015065)
chr2 (19-217)||(31055981-31056184)
chr2 (19-217)||(13569268-13569468)
chr2 (19-217)||(20522159-20522360)
chr2 (19-148)||(10707209-10707339)
chr2 (19-217)||(8390107-8390307)
chr2 (19-217)||(23078428-23078629)
chr2 (19-170)||(28259135-28259289)
chr2 (19-146)||(10445401-10445529)
chr2 (19-169)||(14698965-14699116)
chr2 (19-169)||(39482919-39483071)
chr2 (23-148)||(2837992-2838117)
chr2 (19-148)||(8040070-8040202)
chr2 (20-214)||(35397453-35397648)
chr2 (19-169)||(21629932-21630083)
chr2 (19-217)||(33528583-33528779)
chr2 (19-169)||(34682291-34682443)
chr2 (14-134)||(17865227-17865348)
chr2 (19-145)||(33118149-33118276)
chr2 (56-217)||(34388798-34388960)
chr2 (19-135)||(25398518-25398635)
chr2 (19-135)||(25403656-25403773)
chr2 (56-148)||(1345535-1345628)
chr2 (27-135)||(3491773-3491882)
chr2 (18-116)||(27139844-27139942)
chr2 (19-118)||(25407662-25407762)
chr2 (40-131)||(16388449-16388540)
chr2 (19-144)||(42039626-42039752)
chr2 (20-114)||(18674360-18674454)
chr2 (70-135)||(9296410-9296475)
chr2 (70-135)||(11098936-11099001)
chr2 (70-135)||(14291511-14291576)
chr2 (19-131)||(28770732-28770844)
chr2 (19-85)||(723824-723891)
chr2 (19-85)||(11151671-11151738)
chr2 (19-85)||(11690522-11690589)
chr2 (74-135)||(40738866-40738926)
chr2 (19-85)||(42362373-42362440)
chr2 (92-148)||(35215592-35215648)
chr2 (92-148)||(35217969-35218025)
[»] scaffold0078 (2 HSPs)
scaffold0078 (19-223)||(23462-23671)
scaffold0078 (74-223)||(43198-43338)
[»] chr3 (51 HSPs)
chr3 (61-217)||(25929433-25929590)
chr3 (19-137)||(4386875-4386993)
chr3 (19-217)||(8370434-8370635)
chr3 (19-169)||(1736252-1736404)
chr3 (19-148)||(18552830-18552960)
chr3 (19-217)||(21711162-21711362)
chr3 (19-217)||(30709737-30709939)
chr3 (19-144)||(25795795-25795921)
chr3 (19-169)||(27974899-27975053)
chr3 (19-169)||(3715949-3716101)
chr3 (19-177)||(29100140-29100299)
chr3 (19-135)||(6794660-6794777)
chr3 (19-217)||(26298927-26299128)
chr3 (19-148)||(36029103-36029233)
chr3 (19-217)||(40592729-40592931)
chr3 (23-169)||(47923856-47924005)
chr3 (19-144)||(48438228-48438354)
chr3 (19-116)||(21353604-21353701)
chr3 (74-182)||(27986449-27986562)
chr3 (18-144)||(16264364-16264490)
chr3 (19-145)||(40844665-40844791)
chr3 (27-169)||(32143307-32143453)
chr3 (19-169)||(3328304-3328455)
chr3 (70-182)||(27452929-27453046)
chr3 (19-169)||(37466279-37466430)
chr3 (74-170)||(33386669-33386768)
chr3 (19-169)||(24695111-24695263)
chr3 (70-217)||(1305888-1306036)
chr3 (74-220)||(1417493-1417641)
chr3 (70-135)||(26928600-26928665)
chr3 (92-148)||(38210567-38210623)
chr3 (70-135)||(2671595-2671660)
chr3 (19-135)||(3323638-3323754)
chr3 (70-135)||(7167267-7167332)
chr3 (70-135)||(8477385-8477450)
chr3 (70-135)||(8739072-8739137)
chr3 (70-135)||(9091310-9091375)
chr3 (74-217)||(39039995-39040141)
chr3 (70-135)||(40372804-40372869)
chr3 (19-98)||(5366272-5366351)
chr3 (61-104)||(25929363-25929406)
chr3 (19-85)||(760868-760935)
chr3 (19-85)||(5433956-5434024)
chr3 (19-103)||(8126685-8126770)
chr3 (19-85)||(22835082-22835149)
chr3 (19-85)||(23391989-23392056)
chr3 (19-85)||(46860495-46860562)
chr3 (92-148)||(6063450-6063506)
chr3 (14-70)||(25517070-25517126)
chr3 (92-148)||(38890237-38890293)
chr3 (92-148)||(50494196-50494252)
[»] chr8 (33 HSPs)
chr8 (23-217)||(6813621-6813818)
chr8 (19-135)||(9054795-9054911)
chr8 (18-215)||(28307503-28307702)
chr8 (19-148)||(7412351-7412480)
chr8 (19-188)||(3051085-3051259)
chr8 (19-169)||(23799534-23799686)
chr8 (19-145)||(6127234-6127361)
chr8 (19-169)||(26403187-26403339)
chr8 (19-217)||(19752351-19752552)
chr8 (19-169)||(5702440-5702592)
chr8 (23-135)||(5990523-5990634)
chr8 (19-100)||(7493131-7493212)
chr8 (19-217)||(31071186-31071388)
chr8 (70-135)||(1261963-1262028)
chr8 (19-217)||(4455966-4456167)
chr8 (92-217)||(9765850-9765978)
chr8 (82-169)||(4696617-4696705)
chr8 (72-217)||(19175765-19175913)
chr8 (70-135)||(4760084-4760149)
chr8 (63-148)||(18870564-18870648)
chr8 (74-135)||(26287924-26287985)
chr8 (74-135)||(26301181-26301242)
chr8 (74-135)||(26313175-26313236)
chr8 (19-85)||(30291627-30291695)
chr8 (70-135)||(36979400-36979465)
chr8 (63-135)||(18853170-18853242)
chr8 (41-83)||(8863604-8863646)
chr8 (19-85)||(18141842-18141908)
chr8 (70-135)||(10689152-10689217)
chr8 (70-135)||(30655669-30655734)
chr8 (92-148)||(18810980-18811036)
chr8 (92-148)||(43079875-43079931)
chr8 (92-148)||(43082246-43082302)
[»] scaffold0148 (1 HSPs)
scaffold0148 (20-148)||(10739-10868)
[»] scaffold0176 (1 HSPs)
scaffold0176 (14-217)||(17202-17408)
[»] scaffold0140 (1 HSPs)
scaffold0140 (14-170)||(8371-8531)
[»] scaffold0006 (3 HSPs)
scaffold0006 (19-217)||(5622-5823)
scaffold0006 (19-217)||(2431-2632)
scaffold0006 (19-169)||(133237-133391)
[»] scaffold0184 (1 HSPs)
scaffold0184 (74-223)||(29506-29646)
[»] scaffold0087 (2 HSPs)
scaffold0087 (19-169)||(43919-44072)
scaffold0087 (19-169)||(36790-36943)
[»] scaffold0036 (1 HSPs)
scaffold0036 (19-148)||(85693-85822)
[»] scaffold0188 (2 HSPs)
scaffold0188 (70-194)||(24054-24179)
scaffold0188 (70-135)||(17961-18026)
[»] scaffold0098 (1 HSPs)
scaffold0098 (82-169)||(45239-45329)
[»] scaffold0016 (1 HSPs)
scaffold0016 (19-148)||(102452-102581)
[»] scaffold0267 (1 HSPs)
scaffold0267 (92-148)||(267-323)
[»] scaffold0002 (1 HSPs)
scaffold0002 (35-83)||(14757-14805)


Alignment Details
Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 7160856 - 7161065
Alignment:
Q  14 aatatgtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctc 113  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7160856 aatatgtagaaattaagtcttgttctttgtgagctttaaatctaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgatctc 7160955  T
Q  114 tcccctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgctttcttatcttgttgctttgattatgcatgtgg 213  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  7160956 tcccctatagtaggtcatattgaatcaaactggattaccattttggtgtgtttgttttctttcttgctttcttattttgttgctttgattatgcctgtgg 7161055  T
Q  214 tgttacttta 223  Q
    |||| |||||    
T  7161056 tgttgcttta 7161065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 12084133 - 12084334
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||| |||||||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||| ||    
T  12084133 gtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctgcc 12084231  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacc---attttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtgg 213  Q
    | ||| ||||||||| || | |||||||||| | |   ||||||||||||||| || ||||||| | || ||||||||  |||||||||||||| |||||    
T  12084232 ccatattaggtcatagtggaccgaactgggtcaacaatattttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgattatgcttgtgg 12084330  T
Q  214 tgtt 217  Q
    ||||    
T  12084331 tgtt 12084334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 11181789 - 11181941
Alignment:
Q  19 gtagaaattaggtcttgttc-tttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctct-cc 116  Q
    |||||||||||||||||||| |||| ||||||| | | |||||| ||||||| | |||||||||||||||||| |||||||||||| | |||||||| ||    
T  11181789 gtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggttgctctctccc 11181888  T
Q  117 cctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgtt 169  Q
    |||| |||||||||||||  | |||||| ||||||||| ||||||||||||||    
T  11181889 cctagagtaggtcatattagaccgaactaggttaccatcttggtgtgtttgtt 11181941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 33030898 - 33031013
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||||||| || |||||||||||||||||| ||| |||||| |||||||||| ||| ||||||||||||| |||| ||||||||||||||||||||||    
T  33030898 gtagaaattatgttttgttctttgtgagcttttaagctaatttcttgtaaccccattgcatcactttcatcttagtgaattggagagctgctctctcccc 33030997  T
Q  119 tatagtaggtcatatt 134  Q
     | |||| ||||||||    
T  33030998 cagagtatgtcatatt 33031013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 17003917 - 17004118
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  |||||||||||||||||| | |||| |  |||||||||  ||||||||| ||||||||||||||||    
T  17003917 gtagaaattaggtcttgttcttgtgtaagcttgtaagttaattttttgtaactcttttgaaatactttcatcatagtggattgaagagctgctctctccc 17004016  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | ||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||||||||||||||| ||||||    
T  17004017 ccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatcttttttgctttgattatgcttgtggt 17004115  T
Q  215 gtt 217  Q
    |||    
T  17004116 gtt 17004118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 6741991 - 6741860
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||||| |||||||||||||| ||  ||| |||||| |||||||  ||||||||||||| ||||| | ||||||||||||||||||| |||||    
T  6741991 gtagaaattaggttttgttctttgtgagtttgcaagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctgctctatcccc 6741892  T
Q  119 tatagtaggtcatattgaatcgaactgggtta 150  Q
     | |||| ||||||||||| ||||||| ||||    
T  6741891 cagagtatgtcatattgaaccgaactgtgtta 6741860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 10281891 - 10281761
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  10281891 gtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctccc 10281792  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | | |  ||||||||||| | ||||||||||    
T  10281791 ccagatcaggtcatattggaccgaactgggt 10281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 2630366 - 2630239
Alignment:
Q  23 aaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctata 122  Q
    ||||||||| |||||||||||| | ||| ||| |||||| ||||||||| |||||||||||||||||  ||||||||| ||||||||| ||||||  | |    
T  2630366 aaattaggttttgttctttgtgtgtttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctgctatctccctcaaa 2630267  T
Q  123 gtaggtcatattgaatcgaactgggtta 150  Q
    | ||||||||||| | |||||| |||||    
T  2630266 gcaggtcatattggaccgaactaggtta 2630239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 11916929 - 11917059
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||  || ||| ||||||| | |||||| |||||||||   ||||||||||||||||||||||||||    
T  11916929 gtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctccc 11917028  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | ||| |||||||||||| | ||||||||||    
T  11917029 ccatattaggtcatattggaccgaactgggt 11917059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 14520369 - 14520168
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| || ||| ||||||| | |||||| ||||||||||  ||||||||| |||||||||||| |||    
T  14520369 gtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattgaagagctgctctccccc 14520271  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtgg 213  Q
    ||| | |||||||||||| | |||||||||| | ||   |||||||||||||| || ||||||| |  | ||||||||  ||||||| |||||| |||||    
T  14520270 ctagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcagtgcttatctttgtgctttgtttatgcttgtgg 14520172  T
Q  214 tgtt 217  Q
    ||||    
T  14520171 tgtt 14520168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 15464672 - 15464517
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||||||||||||| ||| |||||  ||| || |||| ||||||| | |||||| ||||||||||  |||||||||||||||||||||||||    
T  15464672 gtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcc 15464574  T
Q  117 cctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttt 170  Q
    || | | ||| |||||||| | |||||||||| | ||   |||||||||||||||||    
T  15464573 cccagattagatcatattggaccgaactgggtcaacaatcttttggtgtgtttgttt 15464517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 19588886 - 19588756
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  19588886 gtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 19588787  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
      | | ||| |||||||| | ||||||||||    
T  19588786 taagattagttcatattggaccgaactgggt 19588756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 9353290 - 9353443
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||| |||||||||| ||| |||||  ||| |  ||| |||||| | ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  9353290 gtagaaattagatcttgttcttgtgtaagcttgcaagcttttttcttgtaa-ctctttgtaacactttcatcatagtggattggagagctgctctctccc 9353388  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    | | | |||||||||||| | |||||||||| | ||   ||||||||||||||||    
T  9353389 ccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt 9353443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 36932361 - 36932461
Alignment:
Q  72 ctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgt 168  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||| | | |||||||||||| | |||||||||| | ||   |||||||||||||||    
T  36932361 ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgt 36932460  T
Q  169 t 169  Q
    |    
T  36932461 t 36932461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 42127368 - 42127568
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||| |||| |||||||||| || |||||  ||| |||||| ||||||| | || ||| ||||||||||| |||||||||| | |||||||||||||    
T  42127368 gtagaaagtaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggggggctgctctctccc 42127466  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||  ||||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||| ||||||||||| ||||||    
T  42127467 ccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgcttgtggt 42127565  T
Q  215 gtt 217  Q
    |||    
T  42127566 gtt 42127568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 3880439 - 3880322
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||  |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||| ||    
T  3880439 gtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctgcc 3880340  T
Q  118 ctatagtaggtcatattg 135  Q
      | | ||||||||||||    
T  3880339 tcagattaggtcatattg 3880322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 217
Target Start/End: Complemental strand, 28832343 - 28832198
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttaccatt-ttggtgtgtttgttttc 172  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||| | | |||||||||||| | ||||| |||| | || | |||||||||||||||      
T  28832343 ttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtcaacaatcttggtgtgtttgtttg- 28832245  T
Q  173 tttcttgcttt-cttatcttg-ttgctttgattatgcatgtggtgtt 217  Q
    |||||| | || ||||||||  ||| ||||||||||| |||||||||    
T  28832244 tttctttcattgcttatctttattgatttgattatgcttgtggtgtt 28832198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 28537707 - 28537593
Alignment:
Q  77 tatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggtta-ccattttggtgtgtttgttttcttt 175  Q
    ||||||||| |||| |||||||||||||||||||||||| | ||||| ||||  ||||| |||||  || |||| | || ||||| |||||| |||| ||    
T  28537707 tatcacttttatcttagtggattggagagctgctctctctcttataggaggttctattggatcgagttgagttatcaatcttggtctgtttg-tttcatt 28537609  T
Q  176 cttgctttcttatctt 191  Q
    ||||||||||||||||    
T  28537608 cttgctttcttatctt 28537593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 24553520 - 24553664
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttc 172  Q
    ||||| ||||||||||| |||||| ||||| ||||||||||||| || | |||||||||||| | |||||||| |  || || |||||||||||| || |    
T  24553520 ttgtaacactttcatcttagtggagtggag-gctgctctctcccatagattaggtcatattggaccgaactggatcaacaatcttggtgtgtttg-ttcc 24553617  T
Q  173 tttcttgc-tttcttatc-ttgttgctttgattatgcatgtggtgtt 217  Q
    |||||| | || |||||| || ||||||||||||||| |||||||||    
T  24553618 tttctttcattgcttatctttattgctttgattatgcttgtggtgtt 24553664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 38192313 - 38192196
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||| |||| ||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||||    
T  38192313 gtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 38192215  T
Q  117 cctatagtaggtcatattg 135  Q
    || | | |||| |||||||    
T  38192214 cccagattaggccatattg 38192196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 38219538 - 38219421
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||| |||| ||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||||    
T  38219538 gtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 38219440  T
Q  117 cctatagtaggtcatattg 135  Q
    || | | |||| |||||||    
T  38219439 cccagattaggccatattg 38219421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 31300615 - 31300705
Alignment:
Q  80 cactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    ||||||||||| |||||||||||||| | |||||||||  | | |||||||||||| | ||||||||||  || || ||||||||||||||    
T  31300615 cactttcatcttagtggattggagagtttctctctccctcagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 31300705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 24135936 - 24135871
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||| |||| |||||| ||||||||||||||| | | |||| |||||||    
T  24135936 ccctttgtaacactttcatcttagtgcattggatagctgctctctcccccagattaggccatattg 24135871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 35387750 - 35387685
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  ||| ||||||||||||||||||||||| | | |||| |||||||    
T  35387750 ccctttgtaacactttcatcatagtagattggagagctgctctctcccccagattaggccatattg 35387685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 4410239 - 4410295
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    ||||||||||||||||||||||||||| | | ||||||| |||| | ||||||||||    
T  4410239 agtggattggagagctgctctctcccccagactaggtcagattggaccgaactgggt 4410295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 213486 - 213553
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||  ||||||||||||||||  |||||| |||||| ||||||||| |||||||| ||||    
T  213486 gtagaaattaggg-ttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctcttt 213553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 13695835 - 13695771
Alignment:
Q  23 aaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||  ||||||||||||||||  |||||| |||||| ||||||||| |||||||| ||||    
T  13695835 aaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttgtatctcttt 13695771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 15044750 - 15044709
Alignment:
Q  94 tggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||||||||||||||||||| ||| |||| |||||||    
T  15044750 tggattggagagctgctctctcccccatattaggccatattg 15044709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 33831701 - 33831768
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| ||||||||||||||||  || ||| |||||| ||||||||| |||||||| ||||    
T  33831701 gtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 15552462 - 15552518
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  15552462 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 15552518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 31179433 - 31179377
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  31179433 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 31179377  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 31542951 - 31543007
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  31542951 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 31543007  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 31545297 - 31545353
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  31545297 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 31545353  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 120
Target Start/End: Complemental strand, 36263875 - 36263847
Alignment:
Q  92 agtggattggagagctgctctctccccta 120  Q
    |||||||||||||||||||||||||||||    
T  36263875 agtggattggagagctgctctctccccta 36263847  T

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Target: chr4 (Bit Score: 124; Significance: 7e-64; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 1983259 - 1983454
Alignment:
Q  20 tagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccct 119  Q
    ||||||||| || |||||||||||||||||  ||| |||||| ||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||     
T  1983259 tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctagtggattggagagctgctatctccccc 1983358  T
Q  120 atagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgctttcttatcttgttgctttgattatgcatgtggtg 215  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||  |||||||    
T  1983359 atagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatattgttgttttgattatgtttgtggtg 1983454  T

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Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 39774262 - 39774452
Alignment:
Q  19 gtagaaattaggtcttgtt-ctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||| ||||||||  |||||||||||||||| | ||||||||||||||||||||| ||||    
T  39774262 gtagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaacctatttgtatcactttcattttagtggattggagagctgctctatccc 39774361  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccattttg-gtgtgtttgttttctttcttgctttcttatcttgttgctttgattatgc 207  Q
    | | |||||||||||||| | ||||||| |||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  39774362 ccagagtaggtcatattggaccgaactgagttaccatcttgtgtgtgtttgttttctttcttgctatcttatcttgttgttttgattatgc 39774452  T

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Target: chr4; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 5112381 - 5112193
Alignment:
Q  14 aatatgtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctc 113  Q
    |||| ||| ||||||||||| ||| ||| |||| ||| ||| |||||| ||||||||| |||||| ||||||||| | ||||||||||||||||||||||    
T  5112381 aataggtacaaattaggtctcgttttttatgagtttttaagctaatttcttgtaacccatttgtaacactttcatattagtggattggagagctgctctc 5112282  T
Q  114 tcccctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgctttcttatcttgttgctttgat 202  Q
     |||| | ||||| |||||||| | |||||||||||||||| ||||||||||||||||||||| | ||||||||| |||||||||||||    
T  5112281 acccccaaagtagatcatattggaccgaactgggttaccatcttggtgtgtttgttttctttcgtactttcttatattgttgctttgat 5112193  T

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Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 18377499 - 18377343
Alignment:
Q  19 gtagaaattaggtcttgtt-ctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||| |||||| ||||||||||||| ||| | |||| || |||||| |||||||||||||||||| |||||| ||||| ||||||||||||     
T  18377499 gtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataacccatttgtatcactttcatcttagtggaatggagggctgctctctcct 18377400  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctt 174  Q
    | | |||||||||||| |||  ||||||||||||||| |||||||||||||||||||    
T  18377399 ccagagtaggtcatatagaactgaactgggttaccatcttggtgtgtttgttttctt 18377343  T

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Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 34495825 - 34495975
Alignment:
Q  63 ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttaccattttggtgt 162  Q
    ||||||||| |||||||||||||||||| |||||||||||| |||||||||||||| | |||| ||||| ||| | |||||| ||||||||| |||||||    
T  34495825 ttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagagtaagtcatgttggaccgaactaggttaccatcttggtgt 34495924  T
Q  163 gtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtg 212  Q
    |||||||||||||||| | || ||| | || ||||||||||||||| ||||    
T  34495925 gtttgttttctttctttcattgcttgttttattgctttgattatgcttgtg 34495975  T

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Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 6743373 - 6743573
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||||||| || |||| ||| | |||||||||||| | | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  6743373 gtagaaattaggtcttgttcttttgtaagctataa-gctaattttttgtagctcttttgtaacactttcatcatagtggattggagggctgctctctccc 6743471  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgc-tttcttatct-tgt-tgctttgattatgcatgtggt 214  Q
     || | |||||||||||| | |||||||||| | ||| ||||||||||||||  ||||||| | |||||||||| | | |||||||||||||| ||||||    
T  6743472 gtagattaggtcatattggaccgaactgggtcaacatcttggtgtgtttgttc-ctttcttccatttcttatctctatatgctttgattatgcttgtggt 6743570  T
Q  215 gtt 217  Q
    |||    
T  6743571 gtt 6743573  T

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Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 10047519 - 10047318
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  10047519 gtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 10047420  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | ||||||||||  || || |||||||||||| || ||||||| | ||  ||||| || ||||||||||||||| ||||||    
T  10047419 ccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgtttatctttattgctttgattatgcttgtggt 10047321  T
Q  215 gtt 217  Q
    |||    
T  10047320 gtt 10047318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 38152396 - 38152596
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| || |||| | |||||| |||||||| |  ||||||||||||||||||||||||||    
T  38152396 gtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataactcttttgtaacactttcaccatagtggattggagagctgctctctccc 38152495  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtggtg 215  Q
    | | | || ||||||||| | ||||||||||  || || |||||||||||| || ||||||| | || ||||||||  |||||||||||||| |||||||    
T  38152496 ccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgattatgcttgtggtg 38152594  T
Q  216 tt 217  Q
    ||    
T  38152595 tt 38152596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 16623250 - 16623402
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||   || |||||| ||||||| | |||||| ||||||||||  |||||||||||||||||||||||||     
T  16623250 gtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcct 16623349  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||||| ||||||||||  || || ||||||||||||||    
T  16623350 ccagattaggtcatattgaaccgaactgggtcaacaatcttggtgtgtttgtt 16623402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 36315187 - 36315338
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||| |||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  36315187 gtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctccc 36315285  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccatt-ttggtgtgtttgtt 169  Q
    | | | |||||||||||| | |||||||||| | |||| ||||||||||||||    
T  36315286 ccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgtt 36315338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 36329396 - 36329547
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||| |||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  36329396 gtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctccc 36329494  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccatt-ttggtgtgtttgtt 169  Q
    | | | |||||||||||| | |||||||||| | |||| ||||||||||||||    
T  36329495 ccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgtt 36329547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 3796476 - 3796681
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||  |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||| ||||| |||||||||||    
T  3796476 gtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctccc 3796575  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca--ttttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtgg 213  Q
    | ||| |||||||||||| |  ||||||||| | ||   ||||||||||||| || || |||| | || |||||| || ||||||||||||||| ||||     
T  3796576 ccatattaggtcatattggacggaactgggtcaacaatctttggtgtgtttg-ttcctctctttcattgcttatctttattgctttgattatgcttgtga 3796674  T
Q  214 tgttact 220  Q
    |||||||    
T  3796675 tgttact 3796681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 24333911 - 24333753
Alignment:
Q  56 taattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggtt-accat 154  Q
    ||||||||| |||| | |||||| ||| ||||||  ||||||||||||||||||||||||||| | | |||||||||||| | ||||||| ||| || ||    
T  24333911 taattttttataactcttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgagttaacaat 24333812  T
Q  155 tttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtg 212  Q
     |||||||||||| |||||||||| | || |||||| || ||||||||||||||| ||||    
T  24333811 cttggtgtgtttg-tttctttctttcattgcttatctttattgctttgattatgcttgtg 24333753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 5396629 - 5396830
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| || ||| ||||||| | |||| | ||||||||||  |||||||||||||||||||||||||     
T  5396629 gtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgcaacactttcatcatagtggattggagagctgctctctcct 5396727  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtgg 213  Q
    | | | |||||||||||| | |||||||||| | ||   |||||||||||||  || ||||||| | || ||||||||  ||||||| |||||| |||||    
T  5396728 ccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgttt-cttcctttctttcattgcttatctttgtgctttgtttatgcttgtgg 5396826  T
Q  214 tgtt 217  Q
    ||||    
T  5396827 tgtt 5396830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 31985591 - 31985744
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||| ||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||||    
T  31985591 gtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 31985689  T
Q  117 cctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    || | | |||||||||||| | |||||||||| | ||   ||||||||||||||||    
T  31985690 cc-agattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt 31985744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 217
Target Start/End: Complemental strand, 39246094 - 39245933
Alignment:
Q  58 attttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattt 156  Q
    |||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||| | | |||||||||||| | ||||||||||  || || |    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 39245995  T
Q  157 tggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggtgtt 217  Q
    ||||||||||| || ||||||| | || |||||| || ||| ||||||||||| |||||||||    
T  39245994 tggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgcctgtggtgtt 39245933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 37782001 - 37781802
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||||||| |  |||||||||||||| ||| ||| |||||| |||||||| |||||||||||||| ||   |||||||||||||| | ||||||| ||    
T  37782001 gtagaaattaagatttgttctttgtgagtttttaagctaatttcttgtaacctctttgtatcacttttattatagtggattggagagttactctctctcc 37781902  T
Q  119 tatagtaggtcata-ttgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgctttcttatc-ttgttgctttgattatgcatgtggtg 215  Q
     | ||||||||||| || || ||||||||||  || || ||||| || ||||||||||   |  ||||||||| |||||||||||| ||||| |||||||    
T  37781901 ga-agtaggtcatatttaaaccgaactgggtaaacaatattggtttg-ttgttttcttctattatttcttatctttgttgctttgaatatgcttgtggtg 37781804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 3777688 - 3777492
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||| |||||||||| ||| || ||  ||| || ||| |||||| | ||||||| ||||||||||  |||||||||||||||| ||||||||     
T  3777688 gtagaaattagatcttgttcttgtgtaagtttgcaagctattttcttgtaa-ctctttgtaacactttcatcatagtggattggagagctactctctcct 3777590  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtggt 214  Q
    ||| | ||||| |||||| | ||||||||||  || || | |||||||||| || ||||||| | || ||||||||  |||||||||||||| ||||||    
T  3777589 ctagattaggttatattggaccgaactgggtcaacaatctcggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgattatgcttgtggt 3777492  T

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Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 16630642 - 16630844
Alignment:
Q  24 aattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctata 122  Q
    |||||| |||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||| ||||||| | | |    
T  16630642 aattagatcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccaga 16630741  T
Q  123 gtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtggtgttact 220  Q
     || ||||||||| | |||||| |||  || |  ||||||||||||||   |||||| | || ||||||||  | |||||||||||| ||||||||| ||    
T  16630742 ttatgtcatattggaccgaactaggtcaacaaccttggtgtgtttgttccttttctttcattgcttatctttgttctttgattatgcttgtggtgttgct 16630841  T
Q  221 tta 223  Q
    |||    
T  16630842 tta 16630844  T

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Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 5143399 - 5143273
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| |||  ||||  ||| || ||| ||||||    |||||| ||||||||||  ||||| ||||||||||||||||||||    
T  5143399 gtagaaattaggtcttgttcttgtgtatgcttgcaagctattttcttgtaaattttttgtaacactttcatcatagtgggttggagagctgctctctccc 5143300  T
Q  118 ctatagtaggtcatattgaatcgaact 144  Q
    | | | |||||||||||| | ||||||    
T  5143299 ccagattaggtcatattggaccgaact 5143273  T

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Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 5147817 - 5147687
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||| ||||||||| ||| |||||  ||| || ||| |||||||   |||||| ||||||||||  | |||| ||||||||||||| |||||    
T  5147817 gtagaaattaggccttgttcttgtgtaagcttgcaagctattttcttgtaactattttgtaacactttcatcataatggactggagagctgctccctccc 5147718  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | | | |||||||||||| | ||||||||||    
T  5147717 ccaaattaggtcatattggaccgaactgggt 5147687  T

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Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 5269204 - 5269349
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttc 172  Q
    ||||| ||||||||||  |||||||||||| |||||||||||||| | | |||||||||||| | |||||| |||  || || ||| |||||||| || |    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttgttgtgtttg-ttcc 5269302  T
Q  173 tttcttgc-tttcttat-cttgttgctttgattatgcatgtggtgtt 217  Q
    |||||| | ||||||||  || ||||||||||||||| |||||||||    
T  5269303 tttctttcatttcttatatttattgctttgattatgcttgtggtgtt 5269349  T

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Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 42599530 - 42599732
Alignment:
Q  19 gtagaaattaggtcttgttc-tttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctg--ctctctc 115  Q
    |||||||||||||||||||| ||||| |||||  ||| |||||| |||||| | | ||||| || |||||||| |||||||||||| | ||  |||||||    
T  42599530 gtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaa-ctcattgtaacattttcatcttagtggattggagggttgctctctctc 42599628  T
Q  116 ccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtg 212  Q
    ||| ||| || ||||||||| |  ||| |||||  || || |||||||||||| || ||||||| | || |||||| || ||||||||||||||| ||||    
T  42599629 ccccatattatgtcatattggactgaattgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtg 42599727  T
Q  213 gtgtt 217  Q
    |||||    
T  42599728 gtgtt 42599732  T

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Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 25862035 - 25862180
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttc 172  Q
    ||||| ||||||||||  |||||||||||| || ||||||| ||| ||| |||||||||||| | ||||||| ||  || || |||||||||||  || |    
T  25862035 ttgtaacactttcatcatagtggattggagggccgctctcttccccatattaggtcatattggaccgaactgagtcaacaatcttggtgtgttt-attcc 25862133  T
Q  173 tttcttgc-tttcttatc-ttgttgctttgattatgcatgtggtgtt 217  Q
    |||||| | || |||||| || ||||||||||||||| |||||||||    
T  25862134 tttctttcattgcttatctttattgctttgattatgcttgtggtgtt 25862180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 28468542 - 28468686
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttt 170  Q
    ||||| ||||||||||  ||||||||||||||||||||||||| | | | ||||||||||||  | ||||||||| | ||   ||||||||||||||  |    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggct-gaactgggtcaacaatcttttggtgtgtttg--t 28468638  T
Q  171 tctttcttgctttcttatctt-gttgctttgattatgcatgtggtgtt 217  Q
    |||| ||| ||| |||||||| |||||||||  | ||| |||||||||    
T  28468639 tcttcctttcttgcttatcttggttgctttgtatttgcttgtggtgtt 28468686  T

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Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 54867323 - 54867123
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||| |||||||| ||| |||||  ||| |||||| || ||||   |||||| || |||||||  ||| ||||| || |||||||||||||    
T  54867323 gtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactattttgtaacattttcatcatagttgattgaagggctgctctctccc 54867224  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccatt-ttggtgtgtttgttttctttcttgcttt-cttatcttg-ttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | |||||||||| | || | ||||||||||||||  ||||||| | || ||||||||  || |||||||||||| ||||||    
T  54867223 c-agactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttc-ctttctttcattgcttatctttattactttgattatgcttgtggt 54867126  T
Q  215 gtt 217  Q
    |||    
T  54867125 gtt 54867123  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 24742028 - 24741963
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  24742028 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 24741963  T

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Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 29760729 - 29760664
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  29760729 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 29760664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 22132454 - 22132398
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||||||| |||||||  ||| | ||||||||||    
T  22132454 agtggattggagggctgctctctcccctatactaggtcaatttggaccgaactgggt 22132398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 873476 - 873571
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctct 114  Q
    ||||||||||||  ||||| |||| ||||||| |||||||||| ||||||||  || |||||| | | |||  ||||||| |||||| ||||||||    
T  873476 gtagaaattaggatttgttatttgcgagcttttaagttaatttcttgtaacctattggtatcattctaatcatagtggatcggagagttgctctct 873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 130
Target Start/End: Complemental strand, 5336835 - 5336805
Alignment:
Q  100 ggagagctgctctctcccctatagtaggtca 130  Q
    |||||||||||||||||||||||||||||||    
T  5336835 ggagagctgctctctcccctatagtaggtca 5336805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 379401 - 379468
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| ||||||||||||||||  || ||| |||||| ||||||||| |||||||| ||||    
T  379401 gtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgcttt 379468  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 52467501 - 52467434
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctt--taaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| |||||||||||||||||  | ||| |||| | ||||||||| |||||||||||||    
T  52467501 gtagaaattaggt-ttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcacttt 52467434  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 16931851 - 16931795
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  16931851 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 16931795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 16934205 - 16934149
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  16934205 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 16934149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 22780435 - 22780379
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  22780435 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 22780379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 44599900 - 44599844
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  44599900 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 44599844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 51337100 - 51337152
Alignment:
Q  33 ttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    |||||||||||||||||| ||| |||||| || |||||| |||||||| ||||    
T  51337100 ttgttctttgtgagcttttaagataatttattataacccttttgtatctcttt 51337152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 28617178 - 28617388
Alignment:
Q  14 aatatgtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctc 113  Q
    |||| ||||||||||||| |||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  28617178 aataggtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctgctctc 28617277  T
Q  114 tcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgctttcttatc-ttgttgctttgattatgcatgt 211  Q
    ||||| | |||||||||||||| | ||||||||||  || || ||||||||||||||||||| ||| ||| |||||| |||||||||||| ||||| |||    
T  28617278 tcccccagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttttcttcctttcttgcttatctttgttgctttgaatatgcttgt 28617377  T
Q  212 ggtgttacttt 222  Q
    |||||| ||||    
T  28617378 ggtgttgcttt 28617388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 3047394 - 3047189
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||| | |||||| ||||||||| | ||||||||||| | | |||||||||||    
T  3047394 gtagaaattaggtcttgttctttgtgagcttttaagttgatttcttgtaactcatttgtaccactttcatattagtggattggataacggctctctcccc 3047295  T
Q  119 t-atagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgctttcttatcttgttgctttgattatgcatgtggtgtt 217  Q
      | || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  3047294 ccagagcaggtcatattggaccgaactgggttacgatcttggtgtgtttgttttctttcttgctttattatcttgttgatttgattatgcttgtggtgtt 3047195  T
Q  218 acttta 223  Q
     |||||    
T  3047194 gcttta 3047189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 5817229 - 5817379
Alignment:
Q  20 tagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccct 119  Q
    |||||||||||| |||||||||||||||| | | |  ||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||     
T  5817229 tagaaattaggttttgttctttgtgagctcttatgcaaatttcttgtaacccctttgtatcactttcatattagtggattggagagctgctctctcccc- 5817327  T
Q  120 atagtaggtcatattgaatcgaactgggttacca--ttttggtgtgtttgtt 169  Q
    | |||||||||||||| | ||||||| |||| ||   |||||||||||||||    
T  5817328 agagtaggtcatattggaccgaactgagttaacaatctttggtgtgtttgtt 5817379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 29159943 - 29159742
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  29159943 gtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctccc 29159844  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    ||| | |||||||||||| | ||||||||||  || || |||||||||||| || || |||| | || |||||| || ||||||||||||||| ||||||    
T  29159843 ctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcattgcttatctttattgctttgattatgcttgtggt 29159745  T
Q  215 gtt 217  Q
    |||    
T  29159744 gtt 29159742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 33332407 - 33332559
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||||||| || |||||  ||| |||||| ||||||| | |||||| ||||||||||| |||||||||||| |||||||||||||    
T  33332407 gtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctccc 33332506  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||  ||||||||||||  || || ||||||||||||||    
T  33332507 ccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttgtt 33332559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 46516267 - 46516419
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| |||||| ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  46516267 gtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 46516366  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    ||| | |||||||||||| | ||||||||||  || || ||||||||||||||    
T  46516367 ctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 46516419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 20284228 - 20284028
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||| |||||||||| || |||||  ||| |||||| ||||||| | || ||| ||||||||||| |||||||||||| |||||||||||||    
T  20284228 gtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaacgcatt-gtaacactttcatcttagtggattggagggctgctctctccc 20284130  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | ||||||||||  || || |||||||||||| || ||||||| | ||||||||| || ||||||||||||||| ||||||    
T  20284129 ccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcatttcttatctttattgctttgattatgcttgtggt 20284031  T
Q  215 gtt 217  Q
    |||    
T  20284030 gtt 20284028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 56087 - 55887
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  56087 gtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 55988  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtggtg 215  Q
    | | | |||||||||||| | ||||||||||  |  || ||||||||||||||   || ||| | || ||||||||  |||||||||||||| |||||||    
T  55987 c-agattaggtcatattggaccgaactgggtcaataatcttggtgtgtttgttcctttccttccattgcttatctttgtgctttgattatgcttgtggtg 55889  T
Q  216 tt 217  Q
    ||    
T  55888 tt 55887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 2647653 - 2647854
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  2647653 gtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 2647752  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | ||||||||||||   |||| |||||  || || ||| |||||||| || ||||||| | || |||||| || ||||||||||||||| ||||||    
T  2647753 ccagaataggtcatattgggccgaattgggtcaacaatcttgatgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtggt 2647851  T
Q  215 gtt 217  Q
    |||    
T  2647852 gtt 2647854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 49091801 - 49091601
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||||| |||||||| ||    
T  49091801 gtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctcttcc 49091702  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtggtg 215  Q
    | | | |||||||||||| |   ||||||||  || || |||||| ||||| || ||||||| | || ||||||||  |||||||||||||| |||||||    
T  49091701 ccagattaggtcatattggactaaactgggtcaacaatcttggtgcgtttg-ttcctttctttcattgcttatctttgtgctttgattatgcttgtggtg 49091603  T
Q  216 tt 217  Q
    ||    
T  49091602 tt 49091601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 2479475 - 2479322
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| || ||| || ||| | ||||||| ||||||||||  |||||||| ||||||||||||| |||    
T  2479475 gtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttataa-ctctttgtaacactttcatcatagtggatttgagagctgctctc-ccc 2479378  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttt 170  Q
    ||| | |||||||||||||| |||||||||| | ||   |||||||||||||||||    
T  2479377 ctagattaggtcatattgaaccgaactgggtcaacaatcttttggtgtgtttgttt 2479322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 9189965 - 9190117
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||| ||||||||| ||| |||||  ||| || |||| |||||| | | ||||| ||||||||||| |||||||||||||||||||||||||    
T  9189965 gtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaa-ctcattgtaacactttcatcttagtggattggagagctgctctctcc 9190063  T
Q  117 cctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    || | | |||||||||||| | ||||||||||  || || ||||||||||||||    
T  9190064 cccagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 9190117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 35960956 - 35960804
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||| ||||||||| || |||||  ||| |||||| || |||| | |||||| ||||||||||  ||||| |||||| |||||||||||||    
T  35960956 gtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtggtttggagggctgctctctccc 35960857  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||||| |||||| |||  || || ||||||||||||||    
T  35960856 ccagattaggtcatattgaaccgaactcggtcaacaatcttggtgtgtttgtt 35960804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 21983425 - 21983294
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaaccccttt-gtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||| |||||||||||||| ||| |||||  ||| || ||| ||||||| | ||| ||| ||||||||||  |||||||||||||||||||||||||    
T  21983425 gtagaaactaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtggattggagagctgctctctcc 21983326  T
Q  117 cctatagtaggtcatattgaatcgaactgggt 148  Q
    || | | |||||||||||| | ||||||||||    
T  21983325 cccagattaggtcatattggaccgaactgggt 21983294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 44848642 - 44848771
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||| ||||| ||| |||||  ||| |  ||| |||||| | ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  44848642 gtagaaattaggtcttattcttgtgtaagcttgcaagcttttttcttgtaa-ctctttgtaacactttcatcatagtggattggagagctgctctctccc 44848740  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | |   |||||||||||||| ||||||||||    
T  44848741 ccaggttaggtcatattgaaccgaactgggt 44848771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 2580474 - 2580378
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| | | |||||||||||| | |||| |||||  || || ||||||||||||||    
T  2580474 ttgtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgtt 2580378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 18408903 - 18408727
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||| |||| ||||||||| ||| |||||  |||||| |||| ||||||||| |||||| ||||||||||  | |||||||||||||||||||||||    
T  18408903 gtagaaactaggacttgttcttgtgtaagcttgcaagttatttttcttgtaaccc-tttgtaacactttcatcatactggattggagagctgctctctcc 18408805  T
Q  117 cctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttttctttcttgctttcttatcttgtt 194  Q
    || | | |||| |||||||  | ||||||||| | ||   ||||||||||||||  ||||||||| ||| |||||||||||    
T  18408804 cccagattaggccatattggct-gaactgggtcaacaatcttttggtgtgtttg--ttctttctttcttgcttatcttgtt 18408727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 217
Target Start/End: Original strand, 4796628 - 4796825
Alignment:
Q  23 aaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctat 121  Q
    |||| ||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| || |||||||  |||||||| ||| |||||| ||||||| |     
T  4796628 aaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccag 4796727  T
Q  122 agtaggtcatattgaatcgaactgggtt-accattttggtgtgtttgttttctttct-tgctttcttatc-ttgttgctttgattatgcatgtggtgtt 217  Q
    | |||||||| ||| | ||||||||||| || || |||||||||||| || |||||| |  || |||||| || ||||||||||||||| |||||||||    
T  4796728 attaggtcattttggaccgaactgggttaacaatcttggtgtgtttg-ttcctttctctcattgcttatctttattgctttgattatgcttgtggtgtt 4796825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 9185178 - 9185252
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| | | ||||| |||||| | ||||||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggt 9185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 217
Target Start/End: Complemental strand, 18413727 - 18413580
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgttt 166  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||| | | |||| |||||||  | ||||||||| | ||   |||||||||||||    
T  18413727 ccctttgtaacactttcatcatagtggattggagagctgctctctcccc-agattaggccatattggct-gaactgggtcaacaatcttttggtgtgttt 18413630  T
Q  167 gttttctttcttgctttcttatctt-gttgctttgattatgcatgtggtgtt 217  Q
    |  ||||||||| ||| |||||||| |||||||||  | ||| |||||||||    
T  18413629 g--ttctttctttcttgcttatcttggttgctttgtatttgcttgtggtgtt 18413580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 47263754 - 47263663
Alignment:
Q  80 cactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttt 170  Q
    ||||||||||  ||||||||||||||||||  ||||||| ||| |||||||||||| | |||||||||| | ||   |||||||||||||||||    
T  47263754 cactttcatcatagtggattggagagctgc--tctcccccatattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttt 47263663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 21639940 - 21639831
Alignment:
Q  27 taggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagt 124  Q
    |||||||||||||| ||| |||||  ||| || |||| ||||||||| |||||| |||||||||   ||||||||||||||||||||||||||| | | |    
T  21639940 taggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcattatagtggattggagagctgctctctcccccagatt 21639842  T
Q  125 aggtcatattg 135  Q
    ||| |||||||    
T  21639841 aggccatattg 21639831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 21646138 - 21646029
Alignment:
Q  27 taggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagt 124  Q
    |||||||||||||| ||| |||||  ||| || |||| ||||||||| ||| || ||||||||||  ||||||||||||||||||||||| ||||| | |    
T  21646138 taggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttt-taacactttcatcatagtggattggagagctgctctcttccctagatt 21646040  T
Q  125 aggtcatattg 135  Q
    ||| |||||||    
T  21646039 aggccatattg 21646029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 2058053 - 2057988
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  2058053 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 2057988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 7351714 - 7351658
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| ||| ||||||| |||| | ||||||||||    
T  7351714 agtggattggagggctgctctctcccccatactaggtcagattggaccgaactgggt 7351658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 23402971 - 23403086
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||| |||||||||| || |||||  ||| |||||| ||||||| | || ||| ||||||||||| ||| |||||||| ||||||| |||||    
T  23402971 gtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtagattggagggctgctcactccc 23403069  T
Q  118 ctatagtaggtcatatt 134  Q
      | | |||||||||||    
T  23403070 tcagattaggtcatatt 23403086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 23565214 - 23565179
Alignment:
Q  14 aatatgtagaaattaggtcttgttctttgtgagctt 49  Q
    |||| |||||||||||||||||||||||||||||||    
T  23565214 aataggtagaaattaggtcttgttctttgtgagctt 23565179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 1533453 - 1533518
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | |||||||||||| |||||||||||| | | |||| |||||||    
T  1533453 ccctttgtaacactttcatcatattggattggagagatgctctctcccccagattaggccatattg 1533518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 31109604 - 31109645
Alignment:
Q  94 tggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||||||||||||||||||||| | |||| |||||||    
T  31109604 tggattggagagctgctctctcccctagattaggccatattg 31109645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 31155973 - 31155917
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  31155973 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 31155917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 24435928 - 24436127
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||| ||| || |||||  ||| |||||| ||||||  | |||||| || |||||||  ||||||| |||| |||||||||||||    
T  24435928 gtagaaattaggtcttgtttttttgtaagcttataagctaatttcttgtaattcatttgtaacattttcatcctagtggatcggagggctgctctctccc 24436027  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgctttcttatc-ttgttgctttgattatgcatgtggtgt 216  Q
    ||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| ||||    
T  24436028 ctagagtaggtcatattggatcgaactgggttaccatcttggtgtgtttgttttctttcttgctttcttatctttgttgctttgtttatgcttgttgtgt 24436127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 4630099 - 4629977
Alignment:
Q  14 aatatgtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctct 112  Q
    |||| ||||||||||||||||||||||| || |||||  |||||||||| |||||||   |||||| ||||||||||| |||||||||||||||||||||    
T  4630099 aataggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactattttgtaacactttcatcttagtggattggagagctgctct 4630000  T
Q  113 ctcccctatagtaggtcatattg 135  Q
    || ||||| | ||||||||||||    
T  4629999 cttccctagattaggtcatattg 4629977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 5572198 - 5572350
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  5572198 gtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 5572297  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    ||| | |||||||||||| | |||| |||||  || || ||||||||||||||    
T  5572298 ctagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgtt 5572350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 31076903 - 31077015
Alignment:
Q  23 aaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctata 122  Q
    ||||||||||||||||||||||| || | ||| |||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||   | |    
T  31076903 aaattaggtcttgttctttgtgaactcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctatctcctagaga 31077002  T
Q  123 gtaggtcatattg 135  Q
    |||||||||||||    
T  31077003 gtaggtcatattg 31077015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 31979653 - 31979501
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||||||| || |||||  |||||||||| ||||||| | |||| | ||||||||||| |||||||||||| |||||||||||||    
T  31979653 gtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctctccc 31979554  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | || ||||||||| | ||||||||||  || || ||||||||||||||    
T  31979553 ccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 31979501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 10077122 - 10077323
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||||||| || |||||  ||| |||||| |||||||   |||||| ||||||||||  |||||||||||| |||||||||||||    
T  10077122 gtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctctctccc 10077221  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | |||| |||||  || || |||||||||||| || ||||||| | || |||||| || ||||||||||||||| ||||||    
T  10077222 ccagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtggt 10077320  T
Q  215 gtt 217  Q
    |||    
T  10077321 gtt 10077323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 31086430 - 31086582
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||| |||| ||| |||||  ||| |||||| ||||||| |||||||| ||||||||||  |||||||||||||| |||||||||||    
T  31086430 gtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctctctccc 31086529  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    ||| | ||| |||||||| |  |||||||||  || || ||||||||||||||    
T  31086530 ctagattagatcatattggactgaactgggtcaacaatcttggtgtgtttgtt 31086582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 5757436 - 5757589
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| | | |||||  ||| || ||| |||||| | ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  5757436 gtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaa-ctctttgtaacactttcatcatagtggattggagagctgctctctccc 5757534  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    | | | |||||||||||| | |||||||||| | ||   ||||||||||||||||    
T  5757535 ccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt 5757589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 21356176 - 21356021
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||||||||||||| ||| |||||  |||||| |||| ||||||| | || ||| ||||||||||  |||||||||||||||||||||||||    
T  21356176 gtagaaattaggtcttgttcttgtgtaagcttgcaagttatttttcttgtaactc-ttagtaacactttcatcatagtggattggagagctgctctctcc 21356078  T
Q  117 cctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttt 170  Q
     | | | |||||||||||| | |||||||||| | ||   |||||||||||||||||    
T  21356077 tccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttt 21356021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 21801301 - 21801418
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| |||||||||||| || |||||  ||| |||||| ||||||| | |||||| |||||| |||| |||||||||||||||||||| |||||    
T  21801301 gtagaaattaagtcttgttcttttgtaagcttataagataatttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctccc 21801400  T
Q  118 ctatagtaggtcatattg 135  Q
    | | | ||||||||||||    
T  21801401 ccagattaggtcatattg 21801418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 27165782 - 27165706
Alignment:
Q  59 ttttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||| ||| |||| ||||| ||||||||||||||||    
T  27165782 ttttttgtaaccccgttgtatcactttcatcttagttgattggagggctactctgtcccccatagtaggtcatattg 27165706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 14521813 - 14521675
Alignment:
Q  18 tgtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||  ||||||||||||||| |   | ||| |||||||||| | |||||||||||||||||| | || ||||||||| ||||||||||     
T  14521813 tgtagaaattaggttgtgttctttgtgagctcttgtgctaa-tttttgtaactcatttgtatcactttcatcttattgaattggagaggtgctctctcct 14521715  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccatttt 157  Q
    | | |||||||||||||| | |||||| ||| | ||||||    
T  14521714 cgagagtaggtcatattggaccgaactaggtcaacatttt 14521675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 5017482 - 5017626
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttc 172  Q
    ||||| ||||||||||  ||| |||||||| | |||||||||||||| | |||||||||||  | ||||||||||  || || |||||||||||| || |    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatttgaccgaactgggtcaacaatcttggtgtgtttg-ttcc 5017580  T
Q  173 tttcttgc-tttcttatcttgttgctttgattatgcatgtggtgtt 217  Q
    |||||| | || ||||||||  |||||||||||||| |||||||||    
T  5017581 tttctttcattgcttatctttgtgctttgattatgcttgtggtgtt 5017626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 18232985 - 18232868
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| | |||| ||||||| | |||||| ||||||||||  |||| ||||||| | |||||||||||    
T  18232985 gtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgctctctccc 18232886  T
Q  118 ctatagtaggtcatattg 135  Q
    | | | ||||||||||||    
T  18232885 ccagattaggtcatattg 18232868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 22963838 - 22963639
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||||||| | |||||| | ||| || ||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| ||||||||||||||    
T  22963838 gtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccc 22963739  T
Q  119 tatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatct-tgttgctttgattatgcatgtggtg 215  Q
     | | | |||||||||| | ||||||||||  || || |||||||||||| || ||||||| | |  ||||||| | ||||||||||||||| |||||||    
T  22963738 -agatttggtcatattgcaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcatagcttatctctattgctttgattatgcttgtggtg 22963641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 23824555 - 23824754
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||||||| | |||||| | ||| || ||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| ||||||||||||||    
T  23824555 gtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccc 23824654  T
Q  119 tatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatct-tgttgctttgattatgcatgtggtg 215  Q
     | | | |||||||||| | ||||||||||  || || |||||||||||| || ||||||| | |  ||||||| | ||||||||||||||| |||||||    
T  23824655 -agatttggtcatattgcaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcatagcttatctctattgctttgattatgcttgtggtg 23824752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 22709102 - 22709004
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||| | | ||| |||||||||| |||||| ||| | ||   ||||||||||||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgaaccgaactaggtcaacaattttttggtgtgtttgtt 22709004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 1115063 - 1115159
Alignment:
Q  20 tagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||  ||||| ||| |||||||| ||||| |||| ||||||||  ||||||||| | | |||  ||||||||||||| |||||||||||    
T  1115063 tagaaattagggtttgttatttttgagcttttaagttgatttcttgtaacctatttgtatcattcttatcatagtggattggagatctgctctctcc 1115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 31936671 - 31936575
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    ||||| ||||||||| | |||||||||||||||||||||||| || | | |||||||||||| | |||||| |||  || || ||||||||||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgtt 31936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 5674779 - 5674844
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  5674779 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 5674844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 30518081 - 30518188
Alignment:
Q  14 aatatgtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctc 113  Q
    |||| |||||||||| |  ||||||||||||| |||| |||||| |||  ||||||| |||||||||||| | |||  |||||||  ||||| |  ||||    
T  30518081 aataggtagaaattaaggtttgttctttgtgaacttttaagttagtttcatgtaacctctttgtatcactcttatcatagtggatcagagagtttatctc 30518180  T
Q  114 tcccctat 121  Q
    ||||||||    
T  30518181 tcccctat 30518188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 2973086 - 2973019
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| ||||||||||||||||  || ||| |||||| ||||||||| |||||||| ||||    
T  2973086 gtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 11857038 - 11856997
Alignment:
Q  94 tggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||||||||||||||||||| ||| |||| |||||||    
T  11857038 tggattggagagctgctctctcccccatattaggccatattg 11856997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 14742457 - 14742498
Alignment:
Q  94 tggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||||||||||||||||||| | | ||||||||||||    
T  14742457 tggattggagagctgctctctcccccaaattaggtcatattg 14742498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 12195577 - 12195521
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  12195577 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 12195521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 215
Target Start/End: Complemental strand, 22819567 - 22819370
Alignment:
Q  20 tagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctct-cccc 118  Q
    ||||||||| ||||| |||||||||||||  |||| |||||| ||||||| | ||||||||||||||||||  ||||||||||| ||| |||||| ||||    
T  22819567 tagaaattatgtcttattctttgtgagctaaaaagctaatttcttgtaactcatttgtatcactttcatcttggtggattggagggctactctctccccc 22819468  T
Q  119 tatagtaggtcatattgaatcgaactgggttaccattttg-gtgtgtttgttttctttcttgctttcttatcttgttgctttgattatgcatgtggtg 215  Q
     | |||||||||||||| | | || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  22819467 cagagtaggtcatattggaccaaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttatcttgttgatttgattatgcttgtggtg 22819370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 9023797 - 9023990
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||||||||||||| ||||||||||||||| | | |||||| ||||| ||| |||||||||||||||||| |||||||||||||||| || | | |||    
T  9023797 gtagaaattaggtcttattctttgtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagagctactatattccc 9023896  T
Q  119 tatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgctttcttatc-ttgttgctttgattatgcatgtggtgtt 217  Q
     ||| |||||||||||| | |||||| ||||||||      |||||||||||||||||||||||||||||| || |||| |||||||||| |||||||||    
T  9023897 cataataggtcatattggagcgaactaggttacca------tgtgtttgttttctttcttgctttcttatctttattgcattgattatgcttgtggtgtt 9023990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 19073068 - 19072866
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||| ||||||||| || |||||  ||| |||||| ||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||    
T  19073068 gtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctccc 19072969  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca--ttttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtgg 213  Q
    | | | |||||||||||| | |||||||||| | ||   ||||||||||||| || ||||||| | || |||||| || ||| ||||||||||| |||||    
T  19072968 ccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgcttgtgg 19072870  T
Q  214 tgtt 217  Q
    ||||    
T  19072869 tgtt 19072866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 19120958 - 19120756
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||| ||||||||| || |||||  ||| |||||| ||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||    
T  19120958 gtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctccc 19120859  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca--ttttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtgg 213  Q
    | | | |||||||||||| | |||||||||| | ||   ||||||||||||| || ||||||| | || |||||| || ||| ||||||||||| |||||    
T  19120858 ccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgcttgtgg 19120760  T
Q  214 tgtt 217  Q
    ||||    
T  19120759 tgtt 19120756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 29651951 - 29651750
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  |||||||||| ||||||  | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  29651951 gtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgctctctccc 29651852  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | ||||||||||  |  || |||||||||||| || ||||||| | || |||||| || ||||||||||||||| ||||||    
T  29651851 ccagattaggtcatattggaccgaactgggtcaaaaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtggt 29651753  T
Q  215 gtt 217  Q
    |||    
T  29651752 gtt 29651750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 9476400 - 9476249
Alignment:
Q  20 tagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||||||||||||| ||| |||||  ||| |||||| || |||| | ||||||  |||||||||  |||||||||||||||||||||||||||    
T  9476400 tagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgctctctcccc 9476301  T
Q  119 tatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    || | |||||||||||| | ||||||||||  || || ||||||||||||||    
T  9476300 tagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 9476249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 47703893 - 47704023
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||  | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  47703893 gtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagagctgctctctccc 47703992  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | | | |||||||||||| | ||||||||||    
T  47703993 ccagattaggtcatattggaccgaactgggt 47704023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 26644855 - 26645056
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| || ||| ||||||| | |||||| ||||||||||  | ||||||||||||||||||||||||    
T  26644855 gtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcataatggattggagagctgctctctccc 26644953  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtgg 213  Q
    | | | |||||||||||| | |||||||||| | ||   |||||||||||||| || ||||||| | || ||||||||  ||||||| |||||| |||||    
T  26644954 ccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgtttatgcttgtgg 26645052  T
Q  214 tgtt 217  Q
    ||||    
T  26645053 tgtt 26645056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 16124473 - 16124625
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  16124473 gtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 16124572  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||| | ||||||| ||  || || ||||||||||||||    
T  16124573 ccagattaggtcatattggaccgaactgagtcaacaatcttggtgtgtttgtt 16124625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 13598538 - 13598337
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| |||||  ||| |||||| ||||| | | |||||| ||||||||||  ||||||||| || |||||||||||||    
T  13598538 gtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctccc 13598439  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | ||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||||||||||||||| ||||||    
T  13598438 ccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtggt 13598340  T
Q  215 gtt 217  Q
    |||    
T  13598339 gtt 13598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 47102800 - 47102999
Alignment:
Q  20 tagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||| |||||||||| ||  ||||  |||||||||| ||||||| | || ||| || |||||||| |||||||||||  ||||||||||||||    
T  47102800 tagaaattaggacttgttcttttgtatgcttataagttaatttcttgtaactcatt-gtaacattttcatcttagtggattggatggctgctctctcccc 47102898  T
Q  119 tatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttc-ttgctttcttatc-ttgttgctttgattatgcatgtggtg 215  Q
    || | |||||||||||| | ||||||||||  || ||||||||||||||| || ||||| ||| || |||||| || ||||||||||||| | |||||||    
T  47102899 tagattaggtcatattggaccgaactgggtcaacaattttggtgtgtttg-ttcctttctttgattgcttatctttattgctttgattatacttgtggtg 47102997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 3281847 - 3281718
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| || ||| ||||||| | |||||| ||||||||||   |||||||||||||||||||||||||    
T  3281847 gtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatcgtggattggagagctgctctctccc 3281749  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | | | |||||||||||| | ||||||||||    
T  3281748 ccagattaggtcatattggaccgaactgggt 3281718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 47098782 - 47098982
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||| |||||||||| || |||||  ||| |||||| ||||||| | || ||| ||||||||||| |||||||||||| |||||||||||||    
T  47098782 gtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgctctctccc 47098880  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttc-ttgctttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | | |||||||||| | ||||||||||  || || |||||||||||| || ||||| ||| || |||||| || ||||||||||||| | ||||||    
T  47098881 ccagattcggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttgattgcttatctttattgctttgattatacttgtggt 47098979  T
Q  215 gtt 217  Q
    |||    
T  47098980 gtt 47098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 13604580 - 13604734
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||||||||||||| ||| || ||  ||| || |||| ||||||| | |||||| || |||||||  |||||||||||||||||||||||||    
T  13604580 gtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgctctctcc 13604678  T
Q  117 cctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    || ||| |||||||||||||| | |||||||| | ||   ||||||||||||||||    
T  13604679 cccatattaggtcatattgaacctaactgggtcaacaatcttttggtgtgtttgtt 13604734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 19361441 - 19361542
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgttt 166  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||| | ||||||||| | ||   |||||||||||||    
T  19361441 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgact-gaactgggtcaacaatcttttggtgtgttt 19361539  T
Q  167 gtt 169  Q
    |||    
T  19361540 gtt 19361542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 19380081 - 19380182
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgttt 166  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||| | ||||||||| | ||   |||||||||||||    
T  19380081 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgact-gaactgggtcaacaatcttttggtgtgttt 19380179  T
Q  167 gtt 169  Q
    |||    
T  19380180 gtt 19380182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 17345477 - 17345607
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||||| |||||||||||| ||| | | | |||||| ||||| | | |||||| ||| ||||||| |||||||||||||||| |||| |||||    
T  17345477 gtagaaattaggttttgttctttgtgggctcttatgctaatttcttgtagcacatttgtaccacgttcatcttagtggattggagagctcctctttcccc 17345576  T
Q  119 tatagtaggtcatattgaatcgaactgggtta 150  Q
     | |||||||||||||  | ||||||||||||    
T  17345577 -agagtaggtcatattagaccgaactgggtta 17345607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 19358808 - 19358918
Alignment:
Q  27 taggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagt 124  Q
    |||||||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||| ||| |    
T  19358808 taggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccatatt 19358906  T
Q  125 aggtcatattga 136  Q
    ||||||||||||    
T  19358907 aggtcatattga 19358918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 217
Target Start/End: Original strand, 27104367 - 27104530
Alignment:
Q  56 taattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccat 154  Q
    |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||| | | ||||| |||||| | ||||||| ||  || ||    
T  27104367 taatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtcaacaat 27104466  T
Q  155 tttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggtgtt 217  Q
     |||||||||||| || |||| || | || |||||| || ||||||||||||||| |||||||||    
T  27104467 cttggtgtgtttg-ttcctttatttcattgcttatctttattgctttgattatgcttgtggtgtt 27104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 775757 - 775611
Alignment:
Q  73 tttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtttt 171  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||| | | |||||||||||| | |||| |||||  || || ||| |||||||| ||     
T  775757 tttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatcttgatgtgtttg-ttc 775659  T
Q  172 ctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggtgtt 217  Q
    ||||||| | || |||||| || ||||||||||||||| |||||||||    
T  775658 ctttctttcattgcttatctttattgctttgattatgcttgtggtgtt 775611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 32736954 - 32737076
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||||  ||||||||| ||| |||| ||| ||||||||||||||| ||||||||||| ||||||  ||| |||  ||||| | ||||||| ||    
T  32736954 gtagaaattagggtttgttctttatgaacttttaagctaattttttgtaacctctttgtatcaccttcatcatagttgatcagagagtttctctctctcc 32737053  T
Q  119 tatagtaggtcatattgaatcga 141  Q
     | |||||||||| ||| |||||    
T  32737054 cagagtaggtcattttggatcga 32737076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 32889579 - 32889453
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||| ||||||||| ||| |||||  ||| || |||| |||||| | | ||||| ||||||||||| ||||||||||||||||||||| |||    
T  32889579 gtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaa-ctcattgtaacactttcatcttagtggattggagagctgctctatcc 32889481  T
Q  117 cctatagtaggtcatattgaatcgaact 144  Q
    || | | |||||||||||| | ||||||    
T  32889480 cccagactaggtcatattggaccgaact 32889453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 217
Target Start/End: Complemental strand, 37069856 - 37069708
Alignment:
Q  72 ctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgt 168  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||| | | |||||||||||| | |||||||||| | ||   ||||||||||||||     
T  37069856 ctttgtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg- 37069758  T
Q  169 tttctttcttgc-tttcttatcttgttgctttgattatgcatgtggtgtt 217  Q
    || |||| || | || ||||||||  ||||||| |||||| |||||||||    
T  37069757 ttcctttatttcgttgcttatctttgtgctttgtttatgcttgtggtgtt 37069708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 24202734 - 24202843
Alignment:
Q  27 taggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagt 124  Q
    |||||||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||| | | |    
T  24202734 taggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagatt 24202832  T
Q  125 aggtcatattg 135  Q
    ||| |||||||    
T  24202833 aggccatattg 24202843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 21536527 - 21536680
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| || |||||||| ||| |||||  ||| || ||| ||||||| | |||||| |||||||||   ||||||||||||||||||||||||||    
T  21536527 gtagaaattaagtattgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcattatagtggattggagagctgctctctccc 21536625  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    | | | |||||||| ||  | |||||||||| | ||   ||||||||||||||||    
T  21536626 ccagattaggtcattttttaccgaactgggtcaacaatcttttggtgtgtttgtt 21536680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 48382441 - 48382524
Alignment:
Q  21 agaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggaga 104  Q
    ||||||||||  ||| ||||||||| |||  |||||||||| ||||||||  |||||||||||||||||  | |||||||||||    
T  48382441 agaaattagggtttgatctttgtgaacttgtaagttaatttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 40816771 - 40816843
Alignment:
Q  19 gtagaaattaggtcttgttc-tttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatct 90  Q
    |||||||||||||||||||| ||||| |||||  ||| |||||| ||||||| | |||||| |||||||||||    
T  40816771 gtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatct 40816843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 4552784 - 4552717
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctt--taaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| |||| ||||||||||||  | ||| |||||| |||||||||||||||||| ||||    
T  4552784 gtagaaattaggt-ttgtcctttgtgagcttgttgaagctaatttcttgtaacccctttgtatcccttt 4552717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 35109495 - 35109556
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatc 80  Q
    |||||||||| |  |||||||||||||||||| ||| |||||| ||||||||  ||||||||    
T  35109495 gtagaaattaaggtttgttctttgtgagcttttaagctaatttcttgtaacctatttgtatc 35109556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 9459481 - 9459425
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  9459481 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 9459425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 9463308 - 9463252
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  9463308 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 9463252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 11032278 - 11032342
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcact 83  Q
    |||||||||| || |||||||||||||| ||| ||  |||||| |||||||| |||| |||||||    
T  11032278 gtagaaattatgttttgttctttgtgagtttttaatctaatttcttgtaacctctttatatcact 11032342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 16226384 - 16226440
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  16226384 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 16226440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 47177579 - 47177634
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| ||||||||||||    
T  47177579 agtggattggagggctgctctctcccc-agactaggtcagattggatcgaactgggt 47177634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 15903848 - 15904043
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||||||||   |||||||||||||||||  ||| || ||| ||||||||||||||||||||||| |||| |||||||||||||  | ||||||||      
T  15903848 gtagaaattagaatttgttctttgtgagcttgtaagcta-tttcttgtaacccctttgtatcacttttatcttagtggattggagattttctctctccgt 15903946  T
Q  119 tatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgctttcttatcttgttgctttgattatgcatgtggtg 215  Q
     | |||||||||||||| |||||||| ||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||| |||||| |||||||    
T  15903947 cagagtaggtcatattggatcgaactaggttaccatcttggtgtatttgttttctttcttgatttcttatcttgttcctttggttatgcttgtggtg 15904043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 27149252 - 27149424
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||| ||| ||||||||||||||||||||| ||| |||||| |||| |||||||||||||||||||||   |||||||||||||||||||||||||||    
T  27149252 gtagaagttaagtcttgttctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccc 27149351  T
Q  119 tatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgctttcttatctt 191  Q
     |||||||||||||||| | | |||| |||||||| | | |||||||||||||| || ||||| |||||||||    
T  27149352 catagtaggtcatattggaccaaacttggttaccagtcttgtgtgtttgttttcattattgctctcttatctt 27149424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 2869650 - 2869852
Alignment:
Q  19 gtagaaattaggtctt-gttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||| || |||||||||||||||| ||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||| |||||||||    
T  2869650 gtagaaattaggtttttgttctttgtgagcttttaagctaatttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctctccc 2869749  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgcttt-cttatc-ttgttgctttgattatgcatgtggt 214  Q
    ||| |||||||||||||| | ||||||||||  || || |||||||||||||| |||| |||  ||| |||||| |||||||||||| ||||| | ||||    
T  2869750 ctagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttctcttcctttatttgcttatctttgttgctttgaatatgcttatggt 2869849  T
Q  215 gtt 217  Q
    |||    
T  2869850 gtt 2869852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 40015065 - 40014868
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||||||| ||||| ||| ||| |||||| | | ||| | |||||||||||||||||| |||||||||||| | || ||||||||    
T  40015065 gtagaaattaggtcttgttcttttgtgagtttttaagctaatttctcgcaactcatttgtatcactttcatcttagtggattggagggatgttctctccc 40014966  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgtttt-ctttcttgctttcttatcttgttgctttgattatgcatgtggtg 215  Q
      | |||| ||||||||| ||| |||||||||||||| || || | |||||||| |||||||| ||||||||||||||||||||||||||| |||||||    
T  40014965 tcagagtatgtcatattggatctaactgggttaccatctt-gtatatttgttttcctttcttggtttcttatcttgttgctttgattatgcttgtggtg 40014868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 31056184 - 31055981
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||||||| || |||||  ||| |||||| ||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||    
T  31056184 gtagaaattaggtcttgttcttttgtaagcttataagctaatttattgtaactcttttgtaacactttcatcttagtggattggagagctgctctctccc 31056085  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca--ttttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtgg 213  Q
    ||| | |||||||||||||| |||||| ||| | ||   |||||||||||||||   |||||| | || |||||| || ||||||||||||||| |||||    
T  31056084 ctagattaggtcatattgaaccgaactaggtcaacaatctttggtgtgtttgttccttttctttcattgcttatctttattgctttgattatgcttgtgg 31055985  T
Q  214 tgtt 217  Q
    ||||    
T  31055984 tgtt 31055981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 13569468 - 13569268
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| | |||  ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  13569468 gtagaaattaggtcttgttcttgtgtaaacttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctccc 13569369  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtggtg 215  Q
    | | | |||||||||||| | ||||||||||  || ||||||||||||||  || ||||||| | ||  |||||||  |||||||||||||| |||||||    
T  13569368 ccagattaggtcatattggaccgaactgggtcaacaattttggtgtgttt-attcctttctttcattgattatctttgtgctttgattatgcttgtggtg 13569270  T
Q  216 tt 217  Q
    ||    
T  13569269 tt 13569268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 20522360 - 20522159
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| |||||||||||| || |||||  ||  |||||| ||||||||| |||||| ||||||||||  |||||||||||| | |||||||||||    
T  20522360 gtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctccc 20522261  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | ||||||||||  || || |||||||||||| || ||||||| | ||||||||| || ||||||||||||||| ||||||    
T  20522260 ccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcatttcttatctttattgctttgattatgcttgtggt 20522162  T
Q  215 gtt 217  Q
    |||    
T  20522161 gtt 20522159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 10707209 - 10707339
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||||| || ||||||||    
T  10707209 gtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctccc 10707308  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | ||| |||||||||||| | ||||||||||    
T  10707309 ccatattaggtcatattggaccgaactgggt 10707339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 8390107 - 8390307
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||  |||||  ||| |||||| ||||||| | ||| || ||||||||||  ||||||||||||||||||||||||||    
T  8390107 gtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctccc 8390206  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtggtg 215  Q
    | | | |||||||| ||| | ||||||||||  || ||||||||||||||| ||  |||||| | |  ||||||||  |||||||||||||| |||||||    
T  8390207 ccaaattaggtcattttggaccgaactgggtcaacaattttggtgtgtttg-ttcatttctttcatcgcttatctttgtgctttgattatgcttgtggtg 8390305  T
Q  216 tt 217  Q
    ||    
T  8390306 tt 8390307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 23078428 - 23078629
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| |||||  ||| || ||| ||||||| | ||| || ||||||||||  |||||||||||||| || ||||||||    
T  23078428 gtagaaattaagtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttctaacactttcatcatagtggattggagagttgttctctccc 23078526  T
Q  118 ctatagtaggtcatattgaatcgaactgggttaccatt---ttggtgtgtttgttttctttcttgcttt-cttatcttgttgctttgattatgcatgtgg 213  Q
    | ||| |||||||||||| |||||||||||| | ||||   ||||||||||||||  | ||||| | || ||||||||  |||||||||||||| |||||    
T  23078527 ccatattaggtcatattggatcgaactgggtcaacattcttttggtgtgtttgttc-cattctttcattgcttatctttgtgctttgattatgcttgtgg 23078625  T
Q  214 tgtt 217  Q
    ||||    
T  23078626 tgtt 23078629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 28259135 - 28259289
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||| |||||||||| ||| |||||  ||| || ||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  28259135 gtagaaattagatcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctccc 28259233  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttt 170  Q
    | | | |||||||||||| | |||||||||| | ||   |||||||||||||||||    
T  28259234 ccaaattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttt 28259289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 10445401 - 10445529
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| || ||  ||| |||||| ||||||| | |||||| |||||||||   ||||||||||||||||||||||||||    
T  10445401 gtagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctccc 10445500  T
Q  118 ctatagtaggtcatattgaatcgaactgg 146  Q
    | | | |||||||||||| | ||||||||    
T  10445501 ccagattaggtcatattggaccgaactgg 10445529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 14698965 - 14699116
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| | ||||||||  |||||||||||| |||||||||||||    
T  14698965 gtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctccc 14699063  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||| | ||||||||||  || || ||||||||||||||    
T  14699064 ccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 14699116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 39483071 - 39482919
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| || |||||||  ||||||||||||  ||||||||||||    
T  39483071 gtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctctccc 39482972  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | ||| |||||||||||| | |||||| |||  || || ||||||||||||||    
T  39482971 ccatattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgtt 39482919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 2837992 - 2838117
Alignment:
Q  23 aaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctata 122  Q
    |||||||||  ||||||||||||||| |     |||||| ||||||| | |||||||||||||||| | |||||||||||||  |||||||||||| | |    
T  2837992 aaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcattttagtggattggagatgtgctctctcccccaga 2838091  T
Q  123 gtaggtcatattgaatcgaactgggt 148  Q
    ||||||||||||| | ||||||||||    
T  2838092 gtaggtcatattggaccgaactgggt 2838117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 8040202 - 8040070
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccc--tttgtatcactttcatctgagtggattggagagctgctctctc 115  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| |   |||||| ||||||||||  ||||||||||||||||||||||||    
T  8040202 gtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagagctgctctctc 8040103  T
Q  116 ccctatagtaggtcatattgaatcgaactgggt 148  Q
    ||| | | |||||||||||| |  |||||||||    
T  8040102 ccccagattaggtcatattggactgaactgggt 8040070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 35397648 - 35397453
Alignment:
Q  20 tagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccct 119  Q
    |||||||||||| ||||||||| ||| |||| ||| |||||||  |||||| |||| |||||||||||||| ||||||||| ||||||||| ||||| |     
T  35397648 tagaaattaggt-ttgttctttatgaccttttaagctaattttc-gtaacctctttatatcactttcatcttagtggattgaagagctgctatctcctcc 35397551  T
Q  120 ata-gtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgctttcttatcttg-ttgctttgattatgcatgtggt 214  Q
    | | |||||| | |||||| ||||||||||  || || ||||||||||||||| |||  ||  || ||||| ||| ||||||||||||||| ||||||    
T  35397550 agatgtaggttagattgaaccgaactgggtaaacaatattggtgtgtttgtttccttctttcattgcttatattgattgctttgattatgcttgtggt 35397453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 21630083 - 21629932
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| |||||  ||  |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  21630083 gtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctccc 21629984  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||| |  |||||||||  || || ||||||||||||||    
T  21629983 c-agattaggtcatattggactgaactgggtcaacaatcttggtgtgtttgtt 21629932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 33528583 - 33528779
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||||||||||||||    |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| | ||||||||  ||    
T  33528583 gtagaaattaggtcttgttctt----agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcc 33528678  T
Q  119 tatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggtg 215  Q
     ||| |||||||||||| | ||||||||||  || || |||||||||||| || ||||||| | ||  ||||| || ||||||||||||||| |||||||    
T  33528679 catattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgtttatctttattgctttgattatgcttgtggtg 33528777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 34682291 - 34682443
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| ||| |  ||| |||||| ||||||| | |||||| |||||||||   ||||||||||||||||||||||||||    
T  34682291 gtagaaattaagtcttgttcttgtgtaagcctgtaagctaatttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctccc 34682390  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | || ||||||||| | ||||||||||  || || ||||||||||||||    
T  34682391 ccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 34682443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 17865348 - 17865227
Alignment:
Q  14 aatatgtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctct 112  Q
    |||| |||||||||| ||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| | ||||||    
T  17865348 aataggtagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctct 17865249  T
Q  113 ctcccctatagtaggtcatatt 134  Q
    |||||| | | |||||||||||    
T  17865248 ctcccccagattaggtcatatt 17865227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 33118276 - 33118149
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| |||||  ||| |||||| |||||||   |||||| | ||||||||  |||||||||||| |||||||||||||    
T  33118276 gtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactattttgtaactctttcatcatagtggattggagggctgctctctccc 33118177  T
Q  118 ctatagtaggtcatattgaatcgaactg 145  Q
    | | | |||||||||||| | |||||||    
T  33118176 ccaaattaggtcatattggaccgaactg 33118149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 217
Target Start/End: Complemental strand, 34388960 - 34388798
Alignment:
Q  56 taattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccat 154  Q
    |||||| ||||||| | |||||| ||||||||||  |||||||||||||||| |||||||||| | | |||||||||||| | |||| |||||  || ||    
T  34388960 taatttcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaat 34388861  T
Q  155 tttggtgtgtttgttttctttcttgcttt-cttatcttgttgctttgattatgcatgtggtgtt 217  Q
     | |||||||||| || ||||||| ||||  |||||||  |||||||||| ||| |||||||||    
T  34388860 ctcggtgtgtttg-ttcctttctttctttgtttatctttgtgctttgattttgcttgtggtgtt 34388798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 25398635 - 25398518
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||| |||| ||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||||    
T  25398635 gtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 25398537  T
Q  117 cctatagtaggtcatattg 135  Q
    || | | ||||||||||||    
T  25398536 cccagattaggtcatattg 25398518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 25403773 - 25403656
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||| |||| ||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||||    
T  25403773 gtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 25403675  T
Q  117 cctatagtaggtcatattg 135  Q
    || | | ||||||||||||    
T  25403674 cccagattaggtcatattg 25403656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 1345535 - 1345628
Alignment:
Q  56 taattttttgtaacccctttgtatcactttcatctga-gtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||| ||| ||| | |||||||||||||||||| | |||||| |||||| |||||||||||| | |||||||||||||| | ||||||||||    
T  1345535 taatttcttgcaactcatttgtatcactttcatcttaagtggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggt 1345628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 3491882 - 3491773
Alignment:
Q  27 taggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagt 124  Q
    |||||||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||| | | |    
T  3491882 taggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagatt 3491784  T
Q  125 aggtcatattg 135  Q
    ||| |||||||    
T  3491783 aggccatattg 3491773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 27139942 - 27139844
Alignment:
Q  18 tgtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||||  |||| |||||||||||||||| |||||||  ||||||   ||||||||||| |  ||  |||| ||||||||||||||||||||    
T  27139942 tgtagaaattagggtttgtactttgtgagctttaaatttaatttcctgtaacatttttgtatcactattttcatagtgaattggagagctgctctctcc 27139844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 25407762 - 25407662
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||| |||| ||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||||    
T  25407762 gtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 25407664  T
Q  117 cc 118  Q
    ||    
T  25407663 cc 25407662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 16388449 - 16388540
Alignment:
Q  40 ttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcat 131  Q
    ||||||||||| ||| |||||| |||||||| |||| |||| || | |||  ||||||  ||||||||||||||||| ||| ||||||||||    
T  16388449 ttgtgagcttttaagctaatttcttgtaacctctttctatctctcttatcaaagtggaaaggagagctgctctctcctctagagtaggtcat 16388540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 42039626 - 42039752
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||||||||||||||| || ||| |||||  ||| ||||||| ||||||| | || ||| ||||||||||  |||||||| ||||||||||||||||    
T  42039626 gtagaaattaggtcttgtttttgtgtaagcttgcaagctaattttcttgtaactc-ttcgtaacactttcatcatagtggattagagagctgctctctcc 42039724  T
Q  117 cctatagtaggtcatattgaatcgaact 144  Q
    |  | | |||||||||||| | ||||||    
T  42039725 cacagattaggtcatattggaccgaact 42039752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 18674360 - 18674454
Alignment:
Q  20 tagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctct 114  Q
    ||||||||| |  |||||||||||||||||| ||  |||||| |||||||||||| |||||||| |  ||  ||| ||| |||||||||||||||    
T  18674360 tagaaattatggtttgttctttgtgagcttttaaactaatttcttgtaaccccttggtatcactcttgtcatagtagatcggagagctgctctct 18674454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 9296410 - 9296475
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  9296410 ccctttgtaacactttcatcatattggattggagagctgctctctcccccaaattaggccatattg 9296475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 11098936 - 11099001
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  11098936 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 11099001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 14291576 - 14291511
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  14291576 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 14291511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 28770732 - 28770844
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||||||||   |||||||||||||||||| ||| |||||| ||||||   |||||||||| | | |||  || |||| ||||||||||||| ||| |    
T  28770732 gtagaaattagagtttgttctttgtgagcttttaagctaatttcttgtaatatctttgtatcattcttatcgtagaggatcggagagctgctctatcctc 28770831  T
Q  119 tatagtaggtcat 131  Q
     | ||||||||||    
T  28770832 cagagtaggtcat 28770844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 723891 - 723824
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| ||||||||||||||||  || ||| |||||| ||||||||| |||||||| ||||    
T  723891 gtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 723824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 11151738 - 11151671
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctt--taaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||| | |||||||||||||||||  | ||| |||||| ||||||||| |||||||||||||    
T  11151738 gtagaaattagat-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 11690522 - 11690589
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| ||||||||||||||||  || ||| |||||| ||||||||| |||||||| ||||    
T  11690522 gtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 11690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 40738926 - 40738866
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||| ||||||||||  |||||||||||||||||||||| |||| | | ||||||||||||    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctc-cccccagattaggtcatattg 40738866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 42362373 - 42362440
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| ||||||||||||||||  || ||| |||||| ||||||||| |||||||| ||||    
T  42362373 gtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 42362440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 35215648 - 35215592
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  35215648 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 35215592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 35218025 - 35217969
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  35218025 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 35217969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 23671 - 23462
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaa----cccctttgtatcactttcatctgagtggattggagagctgctctct 114  Q
    ||||||||||| ||||||| |||||||||||  |||  ||||| ||||||    ||  |||||||||||||||||| |||| |||||| |||| || |||    
T  23671 gtagaaattagatcttgttttttgtgagcttctaagaaaatttcttgtaattaacctatttgtatcactttcatcttagtgaattggatagcttctttct 23572  T
Q  115 cccctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttctttcttgctttcttatcttgttgctttgat--tatgcatgtg 212  Q
    |||||| |||||||||||||| | |||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||  ||||| ||||    
T  23571 cccctaaagtaggtcatattggaccgaactaggttaccatcttggt-tgtttgttttctttcttgctttcttatcttgttgctttaattatatgcttgtg 23473  T
Q  213 gtgttacttta 223  Q
    ||||| |||||    
T  23472 gtgttgcttta 23462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 43338 - 43198
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttct 173  Q
    ||||||||||||||||| |||||||| ||||  || ||||||| ||| |||||||||||||| |  || ||||||         ||||| ||||| ||||    
T  43338 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatattggacggatctgggt---------ggtgtatttgtcttct 43248  T
Q  174 ttcttgctttcttatcttgttgctttgattatgcatgtggtgttacttta 223  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||| |||||    
T  43247 ttcttacttttttatcttgttgctttgattatgcttgtggtgttgcttta 43198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 61 - 217
Target Start/End: Original strand, 25929433 - 25929590
Alignment:
Q  61 ttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttaccattttggt 160  Q
    ||||||||| | |||||||||||||||||| |||||||||||| ||||||||| |||| | |||||||| ||||| | |||||||||||||||| |||||    
T  25929433 ttttgtaactcatttgtatcactttcatcttagtggattggagggctgctctc-cccccagagtaggtcgtattggaccgaactgggttaccatcttggt 25929531  T
Q  161 gtgtttg-ttttctttcttgctttcttatc-ttgttgctttgattatgcatgtggtgtt 217  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||  |||||||||    
T  25929532 gtgtttgtttttctttcttgctttcttatctttgttgctttgattatgtttgtggtgtt 25929590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 4386875 - 4386993
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||||| |||||||||||||||||| ||| |||||| ||||||||| ||||||||||||| |||| | |||||||||||||||||||||||||    
T  4386875 gtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttattggattggagagctgctctctcccc 4386974  T
Q  119 tatagtaggtcatattgaa 137  Q
     | ||||||||||| ||||    
T  4386975 cagagtaggtcatactgaa 4386993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 8370434 - 8370635
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| |||||| ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  8370434 gtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctccc 8370532  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtgg 213  Q
    | | | |||||||||||| | |||||||||| | ||   |||||||||||||| || ||||||| | || ||||||||  |||||||||||||| |||||    
T  8370533 ccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgattatgcttgtgg 8370631  T
Q  214 tgtt 217  Q
    ||||    
T  8370632 tgtt 8370635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 1736252 - 1736404
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  |||||||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  1736252 gtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 1736351  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||| | ||||||||||  || || ||||||||||||||    
T  1736352 ccagattaggtcatattggaccgaactgggtcaacaatattggtgtgtttgtt 1736404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 18552830 - 18552960
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  18552830 gtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 18552929  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | | | |||||||||||| | ||||||||||    
T  18552930 ccagattaggtcatattggaccgaactgggt 18552960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 21711362 - 21711162
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||| |||| ||| |||||| ||| |||||| ||||||| | |||||| ||||||||||  |||||||| |||||||||||||||||    
T  21711362 gtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggatttgagagctgctctctccc 21711264  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatct-tgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | ||||||||||  || || |||||||||||| || ||||||| | || ||||||| | ||||||||||||||| | ||||    
T  21711263 ccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctctattgctttgattatgcctatggt 21711165  T
Q  215 gtt 217  Q
    |||    
T  21711164 gtt 21711162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 30709737 - 30709939
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||| |||| ||| |||||  ||| |||||| ||||||| | |||||| || |||||||  |||||||||||| |||||||||||||    
T  30709737 gtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctctccc 30709836  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtgg 213  Q
    | | | |||||||||||| | |||||||||| | ||   |||||||||||||| || ||||||| | || ||||||||  |||||||||||||| | |||    
T  30709837 ccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgattatgcttatgg 30709935  T
Q  214 tgtt 217  Q
    ||||    
T  30709936 tgtt 30709939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 25795921 - 25795795
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||||||| || |||||  ||| |||||| ||||||| | || ||| ||||||||||| ||| ||||||||||||||||||||||    
T  25795921 gtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctctccc 25795822  T
Q  118 ctatagtaggtcatattgaatcgaact 144  Q
    | | | |||||||||||| | ||||||    
T  25795821 ccagattaggtcatattggaccgaact 25795795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 27974899 - 27975053
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||||||||||||| ||| |||||  ||| || |||| ||||||| | |||||| ||||||||||  |||||||||||||||||||||||||    
T  27974899 gtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcc 27974997  T
Q  117 cctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    || | | |||||||||||| | |||||||||| | ||   ||||||||||||||||    
T  27974998 cccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt 27975053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 3715949 - 3716101
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| || ||  ||| |||||| ||||||| | |||||| ||||||||||  ||| |||||||||||||||||||| |    
T  3715949 gtagaaattaagtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctc 3716048  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    ||| | |||||||||||| | ||||||||||  || || ||||||||||||||    
T  3716049 ctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 3716101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 29100299 - 29100140
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcact-ttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||  |||||||||||||| ||| ||| |||||| || ||||| |||||||||||| || |||  |||||| |||||||||||||||| ||    
T  29100299 gtagaaattagggtttgttctttgtgagtttttaagctaatttcttataacctctttgtatcactctttatcatagtggaatggagagctgctctcttcc 29100200  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttct 177  Q
    ||||||| ||| || ||| | ||||||||||  || || |||||||| |||||||||||||    
T  29100199 ctatagtgggtaattttggaccgaactgggtaaacaatattggtgtg-ttgttttctttct 29100140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 6794660 - 6794777
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||| ||||||||| ||| |||||  ||| ||||||| ||||||| | |||||| ||||||||||  |||||||||||||||||||||||||    
T  6794660 gtagaaattaggacttgttcttgtgtaagcttgcaagctaattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcc 6794758  T
Q  117 cctatagtaggtcatattg 135  Q
    || ||| ||||||||||||    
T  6794759 cccatattaggtcatattg 6794777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 26299128 - 26298927
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| | | || ||  ||| |||||| ||||||| | |||||| ||||||||||  ||| |||||||| |||||||||||||    
T  26299128 gtagaaattaggtcttgttcttgtctaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctccc 26299029  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | || ||||||||||| ||||||||||  || || |||||||||||| || || |||| | || |||||| || ||||||||||||||| ||||||    
T  26299028 ccagattatgtcatattgaaccgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcgttgcttatctttattgctttgattatgcttgtggt 26298930  T
Q  215 gtt 217  Q
    |||    
T  26298929 gtt 26298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 36029233 - 36029103
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| || ||  ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||| ||||||    
T  36029233 gtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctccc 36029134  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | | | |||||||||||| |  |||||||||    
T  36029133 ccagattaggtcatattggacagaactgggt 36029103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 40592729 - 40592931
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||| | |||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  ||| |||||||||||| |||||||||    
T  40592729 gtagaaattagattttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctccc 40592828  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatct-tgttgctttgattatgcatgtggt 214  Q
      | | |||||||||||| | ||||||||||  || || ||||||||||||||   |||||| | || ||||||| | ||||||||||||||| ||||||    
T  40592829 acagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttccttttctttcattgcttatctatattgctttgattatgcttgtggt 40592928  T
Q  215 gtt 217  Q
    |||    
T  40592929 gtt 40592931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 47923856 - 47924005
Alignment:
Q  23 aaattaggtcttgttctttgtg--agctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccccta 120  Q
    ||||||||| ||| ||||||||  | |||| ||| |||||| ||||||| | |||||| ||||||||||  ||| ||||| || ||||||||||||||||    
T  47923856 aaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctccccta 47923955  T
Q  121 tagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
     | |||||||||||| ||||||||||||  || || ||||||||||||||    
T  47923956 gattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgtt 47924005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 48438354 - 48438228
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  | | |||||| ||||||| | |||||| ||||||||||  |||||||||||| |||||||||||||    
T  48438354 gtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccc 48438255  T
Q  118 ctatagtaggtcatattgaatcgaact 144  Q
    | | | |||||||||||| | ||||||    
T  48438254 ccagattaggtcatattggaccgaact 48438228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 21353701 - 21353604
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||||  ||||||||||||||| |   | |||||| ||||||| | |||||||||||||||||| |||||||||||||| ||||||||||    
T  21353701 gtagaaattaggttgtgttctttgtgagctcttgtgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 21353604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 27986449 - 27986562
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt- 169  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||| | | |||||||||||| | |||||||||| | ||   ||||||||||||||||     
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttc 27986548  T
Q  170 -ttctttcttgctt 182  Q
     |||||||||||||    
T  27986549 attctttcttgctt 27986562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 16264490 - 16264364
Alignment:
Q  18 tgtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||||||||||||||||||| ||  |||||  ||| || ||| |||||| | ||||||| ||||||||||  |||||||||||||||||||||||||    
T  16264490 tgtagaaattaggtcttgttcttgtggaagcttgcaagctattttcttgtaa-ctctttgtaacactttcatcatagtggattggagagctgctctctcc 16264392  T
Q  117 cctatagtaggtcatattgaatcgaact 144  Q
    || | | |||||||||||| | ||||||    
T  16264391 cccagattaggtcatattggaccgaact 16264364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 40844791 - 40844665
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||| ||| |||||||||||||    
T  40844791 gtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctctctccc 40844692  T
Q  118 ctatagtaggtcatattgaatcgaactg 145  Q
    | | | |||||||||||| | |||||||    
T  40844691 c-agattaggtcatattggaccgaactg 40844665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 32143453 - 32143307
Alignment:
Q  27 taggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagt 124  Q
    |||||||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||| | | |    
T  32143453 taggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagatt 32143355  T
Q  125 aggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    ||||||||||| | |||||| ||| | ||   ||||||||||||||||    
T  32143354 aggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgtt 32143307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 3328304 - 3328455
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||| |||||||||| || |||||  ||| |||||| ||||||| | || ||| ||||||||||| ||||||||| || ||||||||||||     
T  3328304 gtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattgaagggctgctctctcct 3328402  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    ||| | |||||||||||| |  |||||||||  || || ||||||||||||||    
T  3328403 ctagattaggtcatattggaatgaactgggtcaacaatcttggtgtgtttgtt 3328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 182
Target Start/End: Complemental strand, 27453046 - 27452929
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgttt 166  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||||||   | |||||||||||| | |||||||| | | ||   |||||||||||||    
T  27453046 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaatcttttggtgtgttt 27452947  T
Q  167 gtt--ttctttcttgctt 182  Q
    |||  |||||||||||||    
T  27452946 gttccttctttcttgctt 27452929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 37466430 - 37466279
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||| |||||||||| || |||||  || ||||||| ||||||| | || ||| ||||||||||| |||||||||||| ||| |||||||||    
T  37466430 gtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctactctctccc 37466332  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||| | ||||||| ||  || || ||||||||||||||    
T  37466331 ccagattaggtcatattggaccgaactgtgtcaacaatcttggtgtgtttgtt 37466279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 33386669 - 33386768
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttt 170  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||| | | |||||||||||| | |||||||| | | ||   |||||||||||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatcttttggtgtgtttgttt 33386768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 24695111 - 24695263
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||||||| || || ||  ||| |||||| ||||||| | |||||| ||||||||||  || ||||| ||| | |||||||||||    
T  24695111 gtagaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctccc 24695210  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
     || | |||||||||||| | |||||| |||  || || ||||||||||||||    
T  24695211 gtagattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgtt 24695263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 217
Target Start/End: Complemental strand, 1306036 - 1305888
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgttt 166  Q
    ||||||||| ||||||||||  ||||||||||||||||||| ||||||||| | |||| |||||||  | ||||||||| | ||   |||||||||||||    
T  1306036 ccctttgtaacactttcatcgtagtggattggagagctgctatctcccctagattaggccatattggct-gaactgggtcaacaatcttttggtgtgttt 1305938  T
Q  167 gttttctttcttgctttcttatctt-gttgctttgattatgcatgtggtgtt 217  Q
    |  ||||| ||| ||| |||||||| |||||||||  | ||| |||||||||    
T  1305937 g--ttcttcctttcttgcttatcttggttgctttgtatttgcttgtggtgtt 1305888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 1417493 - 1417641
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttc 172  Q
    ||||| ||||||| ||| |||||||||||| | |||||||||||| | | |||||||||||| | ||||||||||  || || |||||||||||| || |    
T  1417493 ttgtaacactttcttcttagtggattggagggatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcc 1417591  T
Q  173 tttcttgc-tttcttatc-ttgttgctttgattatgcatgtggtgttact 220  Q
    | |||| | || |||||| || ||||||||||||||| |||| |||||||    
T  1417592 tctctttcattgcttatctttattgctttgattatgcttgtgatgttact 1417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 26928600 - 26928665
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  |||||||||||||| |||||||||||| | | ||||||||||||    
T  26928600 ccctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattg 26928665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 38210567 - 38210623
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||| | ||||||||||    
T  38210567 agtggattggagagctgctctctcccccatactaggtcagattggaccgaactgggt 38210623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 2671595 - 2671660
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  2671595 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 2671660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 3323638 - 3323754
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| | |||||||||| || |||||  ||| |||||| ||||||| | || ||| ||||||||||| |||||||||||| |||| |||||| |    
T  3323638 gtagaaattatgacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgttctctctc 3323736  T
Q  118 ctatagtaggtcatattg 135  Q
    | | | ||||||||||||    
T  3323737 ccagattaggtcatattg 3323754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 7167332 - 7167267
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  7167332 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 7167267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 8477450 - 8477385
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  8477450 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 8477385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 8739072 - 8739137
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  8739072 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 8739137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 9091310 - 9091375
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  9091310 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 9091375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 39039995 - 39040141
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttt 170  Q
    ||||| ||||||||||  |||||||||||||| || ||||| ||| | | |||||||||||| | |||||| ||| | ||   |||||||||||||| ||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttg-tt 39040093  T
Q  171 tctttcttgc-tttcttatcttgttgctttgattatgcatgtggtgtt 217  Q
     ||||||| | || ||||||||  ||||||| |||||| |||||||||    
T  39040094 cctttctttcattgcttatctttgtgctttgtttatgcttgtggtgtt 39040141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 40372804 - 40372869
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  40372804 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 40372869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 5366272 - 5366351
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggat 98  Q
    |||||||||| |  || ||| ||||||| ||| ||| |||||| |||||||| ||||||||||||||||||  |||||||    
T  5366272 gtagaaattaagattttttcattgtgagattttaagataatttcttgtaacctctttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 25929363 - 25929406
Alignment:
Q  61 ttttgtaacccctttgtatcactttcatctgagtggattggaga 104  Q
    ||||||||| | |||||||||||||||||| |||||||||||||    
T  25929363 ttttgtaactcatttgtatcactttcatcttagtggattggaga 25929406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 760868 - 760935
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||||| ||||||||||||||  || ||| |||||| ||||||||| |||||||| ||||    
T  760868 gtagaaattaggtct-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 5434024 - 5433956
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||  ||||||||||||||||  |||||| |||||| ||||||||| ||| |||| ||||    
T  5434024 gtagaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttatatctcttt 5433956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 8126770 - 8126685
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggag 103  Q
    |||||||||| || ||||||||| || |||||  ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||    
T  8126770 gtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcgtagtggattggag 8126685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 22835149 - 22835082
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| ||||||||||||||||  || ||| |||||| ||||||||| |||||||| ||||    
T  22835149 gtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 22835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 23392056 - 23391989
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctt--taaagttaattttttgtaacccctttgtatcacttt 85  Q
    |||||||||| || |||||||||||||||||  | ||| |||||| ||||||||| |||||||||||||    
T  23392056 gtagaaattaagt-ttgttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcacttt 23391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 46860495 - 46860562
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| ||||||||||||||||  || ||| |||||| ||||||||| |||||||| ||||    
T  46860495 gtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 46860562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 6063506 - 6063450
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  6063506 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 6063450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 25517126 - 25517070
Alignment:
Q  14 aatatgtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacc 70  Q
    |||| ||||||||||||  |||||||||||||||||| ||| |||||| || |||||    
T  25517126 aataagtagaaattagggtttgttctttgtgagcttttaagctaatttcttataacc 25517070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 38890237 - 38890293
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    ||||||| |||| |||||||||||||||||| |||||||  ||| | ||||||||||    
T  38890237 agtggatcggagggctgctctctcccctatactaggtcaatttggaccgaactgggt 38890293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 50494196 - 50494252
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  50494196 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 50494252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 217
Target Start/End: Complemental strand, 6813818 - 6813621
Alignment:
Q  23 aaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctata 122  Q
    ||||||||| |||||||||||||||||  ||| |||||| ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||      
T  6813818 aaattaggttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattggattggagagctgctctctcccctagt 6813719  T
Q  123 gtaggtcatattgaatcgaactgggttacca--ttttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggtgtt 217  Q
    |||||| |||||| | |||||||||||| ||   |||||| |||||| || ||||||| | ||||||||| || ||||||||||||||| |||| ||||    
T  6813718 gtaggttatattggaccgaactgggttaacaatctttggtatgtttg-ttcctttctttcatttcttatctttattgctttgattatgcttgtgatgtt 6813621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 9054795 - 9054911
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||| | |||||||||||| ||||| ||| |||||| |||||||| ||||||||||||||||||| |||||||| |||||||||||||||| |    
T  9054795 gtagaaattagattttgttctttgtgcgcttttaagctaatttcttgtaaccactttgtatcactttcatcttagtggattagagagctgctctctcctc 9054894  T
Q  119 tatagtaggtcatattg 135  Q
     | ||||||||||||||    
T  9054895 cagagtaggtcatattg 9054911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 28307702 - 28307503
Alignment:
Q  18 tgtagaaattaggtcttgttctttgtgagcttt-aaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||| ||||||||||||||| |||||||| |||  |||||| ||||||||| | ||||| |||| ||||| ||||||||||||||||||||||  |    
T  28307702 tgtagaaagtaggtcttgttctttatgagcttttaaaactaatttcttgtaacccatgtgtattacttccatcttagtggattggagagctgctctcatc 28307603  T
Q  117 cctatagtaggtcatattgaatcgaactgggttacc-attttggtgtgtttgttttctttcttgctttcttat-cttgttgctttgattatgcatgtggt 214  Q
    || | |||||||||| ||| | |||||||||||||| || |||| ||||||  |||| |||||||||||||||  || |||||||| |||||| ||||||    
T  28307602 cccagagtaggtcattttggaccgaactgggttaccaatcttggcgtgttt-atttcattcttgctttcttatatttattgctttgtttatgcttgtggt 28307504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 7412480 - 7412351
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  |||||| ||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  7412480 gtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctccc 7412382  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | ||| |||||||||||| | ||||||||||    
T  7412381 ccatattaggtcatattggaccgaactgggt 7412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 3051259 - 3051085
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    |||||||||| || |||||||||||||||| | | | |||||| ||||||| | |||||||||||||||||| |||||||||||||| |||||||||| |    
T  3051259 gtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctc 3051160  T
Q  119 tatagtaggtcatattgaatcgaactgggttacca--ttttggtgtgt---ttgttttctttcttgctttcttat 188  Q
     | || |||| |||||  | |||| |||||||| |   ||||||||||   ||||||||||||||||||||||||    
T  3051159 cagaggaggttatattagaccgaattgggttactaatctttggtgtgtttgttgttttctttcttgctttcttat 3051085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 23799534 - 23799686
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  |||||||||||| ||||||||||||     
T  23799534 gtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcct 23799633  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||| | ||||||||||  || || ||||||||||||||    
T  23799634 ccaaattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 23799686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 6127361 - 6127234
Alignment:
Q  19 gtagaaattaggtcttgttcttt-gtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||||||||| || |||||  ||| |||||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||||| ||    
T  6127361 gtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctcttcc 6127262  T
Q  118 ctatagtaggtcatattgaatcgaactg 145  Q
    | | | |||||||||||| | |||||||    
T  6127261 ccaaattaggtcatattggaccgaactg 6127234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 26403187 - 26403339
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| ||  |||||  ||| ||||||  | |||| | |||||| ||||||||||  ||||||||||||||||||||||||||    
T  26403187 gtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtggattggagagctgctctctccc 26403286  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | | | |||||||||||| | ||||||||||  || || ||||||||||||||    
T  26403287 ccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 26403339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 19752351 - 19752552
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||| ||||||||| ||| |||||  ||| || |||| |||||| | | ||||| ||||||||||| |||||||||||||||||||||||||    
T  19752351 gtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaa-ctcattgtaacactttcatcttagtggattggagagctgctctctcc 19752449  T
Q  117 cctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatct-tgttgctttgattatgcatgtgg 213  Q
    |||| | |||||||||||| | |||||| |||  || || |||||||||||| || || |||| | || ||||||| | ||||||||||||||| |||||    
T  19752450 cctagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttg-ttcctctctttcattacttatctctattgctttgattatgcttgtgg 19752548  T
Q  214 tgtt 217  Q
    ||||    
T  19752549 tgtt 19752552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 5702440 - 5702592
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||| ||| |||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  || ||||||||| | |||||||||||    
T  5702440 gtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctccc 5702539  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    | ||| |||||||||||| | ||||||||||  || || ||||||||||||||    
T  5702540 ccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 5702592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 5990523 - 5990634
Alignment:
Q  23 aaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctata 122  Q
    |||| ||||| ||||||||||||||||| ||| |||||| |||||||  ||||||||||||||||||| |||  |||||||||| ||||||||||| | |    
T  5990523 aaatgaggtcgtgttctttgtgagcttttaagctaatttcttgtaacatctttgtatcactttcatcttagt-aattggagagccgctctctcccccaca 5990621  T
Q  123 gtaggtcatattg 135  Q
     || |||||||||    
T  5990622 atatgtcatattg 5990634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 7493131 - 7493212
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattg 100  Q
    ||||||||||||| ||||||| |||||||||| | |||||||| || ||||  ||||||||||||||||||| |||||||||    
T  7493131 gtagaaattaggttttgttctgtgtgagcttttatgttaatttcttataacttctttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 31071186 - 31071388
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    ||||||| |||| ||||||||| ||| |||||  ||| || |||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||||    
T  31071186 gtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 31071284  T
Q  117 cctatagtaggtcatattgaatcgaactgggttacca----ttttggtgtgtttgttttctttcttgctttcttatctt-gttgctttgattatgcatgt 211  Q
    || | | |||||||||||| | |||||| ||| | ||    ||||||||||||||  ||||| ||| ||| |||||||| |||||||||  | ||| |||    
T  31071285 cccagattaggtcatattggaccgaactcggtcaacaatctttttggtgtgtttg--ttcttcctttcttgcttatcttggttgctttgtatttgcttgt 31071382  T
Q  212 ggtgtt 217  Q
    ||||||    
T  31071383 ggtgtt 31071388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 1261963 - 1262028
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||| | | ||||||||||||    
T  1261963 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattg 1262028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 4456167 - 4455966
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| |||||   || || ||| |||||| | ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  4456167 gtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttgtaa-ctctttgtaacactttcatcatagtggattggagagctgctctctccc 4456069  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttttctttcttgc-tttcttatcttgttgctttgattatgcatgtgg 213  Q
    | | | |||| ||||||| | ||||| |||| | ||   |||||||||||||| || ||||||| | || ||||||||  ||||||| |||||| ||| |    
T  4456068 ccagattaggccatattggaccgaaccgggtcagcaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgtttatgcttgttg 4455970  T
Q  214 tgtt 217  Q
    ||||    
T  4455969 tgtt 4455966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 9765850 - 9765978
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttaccatt--ttggtgtgtttgttttctttcttgctttcttatc 189  Q
    ||||||||||||||||||||||||||| | | |||||||||||| | |||||||||| | || |  ||||||||||||||  |||  ||  || ||||||    
T  9765850 agtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcattggtgtgtttgttcccttctttcattgcttatc 9765949  T
Q  190 -ttgttgctttgattatgcatgtggtgtt 217  Q
     || ||||||||||||||| |||||||||    
T  9765950 tttattgctttgattatgcttgtggtgtt 9765978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 4696617 - 4696705
Alignment:
Q  82 ctttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgtt 169  Q
    ||||||||  |||||||||||| |||||||||||||| | | |||||||||||| ||||||||||||  || || ||||||||||||||    
T  4696617 ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgtt 4696705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 19175765 - 19175913
Alignment:
Q  72 ctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgt 168  Q
    ||||||| ||||||||||  |||||||||||||| |||||||||||| | | |||||||||||| | |||||| ||| | ||   |||| |||||||||     
T  19175765 ctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctttttgtgtgtttg- 19175863  T
Q  169 tttctttcttgc-tttcttatcttgttgctttgattatgcatgtggtgtt 217  Q
    || ||||||| | || ||||||||  ||||||| |||||| |||||||||    
T  19175864 ttcctttctttcattgcttatctttgtgctttgtttatgcttgtggtgtt 19175913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 4760084 - 4760149
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| ||| |||| |||||||    
T  4760084 ccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattg 4760149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 18870564 - 18870648
Alignment:
Q  63 ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    ||||||||| |||||| |||||||||   | ||||||||||||||||||||||||| | | |||| ||||||| || |||||||||    
T  18870564 ttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggat-gaactgggt 18870648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 26287985 - 26287924
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||| | | |||| |||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattg 26287924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 26301242 - 26301181
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||| | | |||| |||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattg 26301181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 26313236 - 26313175
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||| | | |||| |||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattg 26313175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 30291627 - 30291695
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagct--ttaaagttaattttttgtaacccctttgtatcacttt 85  Q
    ||||||||||||| ||||||||||||||||  || ||| |||||| ||||||| | |||||||||||||    
T  30291627 gtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt 30291695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 36979465 - 36979400
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  36979465 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 36979400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 18853170 - 18853242
Alignment:
Q  63 ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| |||||| |||||||||   | ||||||||||||||||||||||||| | | |||| |||||||    
T  18853170 ttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattg 18853242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 8863604 - 8863646
Alignment:
Q  41 tgtgagctttaaagttaattttttgtaacccctttgtatcact 83  Q
    |||||||||| |||||||||| |||||||| ||||||||||||    
T  8863604 tgtgagcttttaagttaatttcttgtaacctctttgtatcact 8863646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 18141842 - 18141908
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctt--taaagttaattttttgtaacccctttgtatcacttt 85  Q
    |||||||||||||  ||||||||||||||||  | ||| |||||| ||||||||| |||||||||||||    
T  18141842 gtagaaattaggt--tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcacttt 18141908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 10689152 - 10689217
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    |||| |||| ||||||||||  | ||||||||||||||||||||||||| | | |||| |||||||    
T  10689152 ccctctgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattg 10689217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 30655734 - 30655669
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  | | ||||||||||||||||||||||| | | |||| |||||||    
T  30655734 ccctttgtaacactttcatcatattagattggagagctgctctctcccccagattaggccatattg 30655669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 18810980 - 18811036
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | |||||||  ||||| ||||||||||    
T  18810980 agtggattggagggctgctctctcccccagattaggtcaatttgaaccgaactgggt 18811036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 43079875 - 43079931
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  43079875 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 43079931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 43082246 - 43082302
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  43082246 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 43082302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 10868 - 10739
Alignment:
Q  20 tagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||||||||||||| ||| |||||  ||  |||||| ||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||    
T  10868 tagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccc 10769  T
Q  119 tatagtaggtcatattgaatcgaactgggt 148  Q
     | | |||||||||||| | ||||||||||    
T  10768 caaattaggtcatattggaccgaactgggt 10739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 17408 - 17202
Alignment:
Q  14 aatatgtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctct 112  Q
    |||| |||||||||||||||||||||| ||| |||||  ||| |||||| ||||||| | |||||| ||||||||||  | |||||||||| | ||||||    
T  17408 aataggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataatggattggagggttgctct 17309  T
Q  113 ctcccctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcat 209  Q
    ||  || ||| |||||||||||||| ||||||||||  || |||||||||||||||  | ||||||| | ||||||||| || ||||||| ||||||| |    
T  17308 ctttcccatattaggtcatattgaaccgaactgggtcaacaattttggtgtgtttg-ctcctttctttcatttcttatctttattgctttaattatgctt 17210  T
Q  210 gtggtgtt 217  Q
    ||||||||    
T  17209 gtggtgtt 17202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 8371 - 8531
Alignment:
Q  14 aatatgtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctc 111  Q
    |||| |||||||||||||||||||||| ||| |||||  ||| || |||| ||||||| | |||||| ||||||||||  ||||||||||||||||||||    
T  8371 aatacgtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 8469  T
Q  112 tctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgttt 170  Q
    ||||||| | | |||||||||||| | |||||||||| | ||   |||||||||||||||||    
T  8470 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttt 8531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 5823 - 5622
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||| ||||||||||| ||| |||||  ||| |||||| ||||| | | |||||| ||||||||||  ||||||||| || |||||||||||||    
T  5823 gtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctccc 5724  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | ||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||||||||||||||| ||||||    
T  5723 ccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtggt 5625  T
Q  215 gtt 217  Q
    |||    
T  5624 gtt 5622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 2632 - 2431
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||| |||||||||| ||| |||||  ||| |||||| || |||  | |||||| ||||||||||  |||||||||||| |||||| ||||||    
T  2632 gtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttgtaacactttcatcatagtggattggagggctgctgtctccc 2533  T
Q  118 ctatagtaggtcatattgaatcgaactgggt-taccattttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgctttgattatgcatgtggt 214  Q
    | | | |||||||||||| | ||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||||||||||||||| ||||||    
T  2532 ccagattaggtcatattggagcgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtggt 2434  T
Q  215 gtt 217  Q
    |||    
T  2433 gtt 2431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 133237 - 133391
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaatttt-ttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcc 116  Q
    |||||||||||||||||||||| ||| || ||  ||| || |||| ||||||| | |||||| || |||||||  |||||||||||||||||||||||||    
T  133237 gtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgctctctcc 133335  T
Q  117 cctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    || ||| |||||||||||||| | |||||||| | ||   ||||||||||||||||    
T  133336 cccatattaggtcatattgaacctaactgggtcaacaatcttttggtgtgtttgtt 133391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 29506 - 29646
Alignment:
Q  74 ttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttaccattttggtgtgtttgttttct 173  Q
    ||||||||||||||||| |||||||| ||||  || ||||||| ||| |||||||||||||| |  || ||||||         ||||| ||||| ||||    
T  29506 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatattggacggatctgggt---------ggtgtatttgtcttct 29596  T
Q  174 ttcttgctttcttatcttgttgctttgattatgcatgtggtgttacttta 223  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||| |||||    
T  29597 ttcttacttttttatcttgttgctttgattatgcttgtggtgttgcttta 29646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 43919 - 44072
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||||||||||||||||| | | |||||  ||| || ||| |||||| | ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  43919 gtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaa-ctctttgtaacactttcatcatagtggattggagagctgctctctccc 44017  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    | | | ||| |||||||| | |||||||||| | ||   ||||||||||||||||    
T  44018 ccagaatagatcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt 44072  T

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Target: scaffold0087; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 36790 - 36943
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    |||||||| | ||||||||||| ||| |||||  ||| || ||| ||||||| | |||||| ||||||||||  ||||| |||| |||||||||||| ||    
T  36790 gtagaaatcatgtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtgggttggcgagctgctctcttcc 36888  T
Q  118 ctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    ||| | |||||||||||| | |||||||||| | ||   ||||||||||||||||    
T  36889 ctagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt 36943  T

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Target: scaffold0036 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 85822 - 85693
Alignment:
Q  19 gtagaaattaggtcttgttctt-tgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctccc 117  Q
    ||||||||||||||||| |||| ||| |||||| ||| |||||| ||||||| | |||||| ||||||||||   |||||||||||||| ||||||||||    
T  85822 gtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagccgctctctccc 85724  T
Q  118 ctatagtaggtcatattgaatcgaactgggt 148  Q
    | | | |||||||||||| |  |||||||||    
T  85723 ccagattaggtcatattggactgaactgggt 85693  T

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Target: scaffold0188 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 24054 - 24179
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca----ttttggtgtgtt 165  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||| | | |||| |||||||  | ||||||||| | ||    ||||||||||||    
T  24054 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatctttttggtgtgtt 24152  T
Q  166 tgttttctttcttgctttcttatcttgtt 194  Q
    ||  ||||| ||| |||||||||||||||    
T  24153 tg--ttcttcctttctttcttatcttgtt 24179  T

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Target: scaffold0188; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 17961 - 18026
Alignment:
Q  70 ccctttgtatcactttcatctgagtggattggagagctgctctctcccctatagtaggtcatattg 135  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||| | | |||| |||||||    
T  17961 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattg 18026  T

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Target: scaffold0098 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 45329 - 45239
Alignment:
Q  82 ctttcatctgagtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggttacca---ttttggtgtgtttgtt 169  Q
    ||||||||  ||||||||||||||||||||||||||| | | |||||||||||||| ||||||| || | ||   ||||||||||||||||    
T  45329 ctttcatcatagtggattggagagctgctctctcccccagattaggtcatattgaaccgaactgagtcaacaatcttttggtgtgtttgtt 45239  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 102452 - 102581
Alignment:
Q  19 gtagaaattaggtcttgttctttgtgagctttaaagttaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgctctctcccc 118  Q
    ||||||||||||  ||||| |||||||||||| ||| |||||| |||||||| |||||||||||| | |||   ||||||  ||||| || ||||||  |    
T  102452 gtagaaattagggtttgttttttgtgagcttttaagataatttcttgtaacctctttgtatcactcttatcattgtggatcagagagttgttctctcttc 102551  T
Q  119 tatagtaggtcatattgaatcgaactgggt 148  Q
     | | ||||| || ||||||||||||||||    
T  102552 cacactaggtaattttgaatcgaactgggt 102581  T

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Target: scaffold0267 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 267 - 323
Alignment:
Q  92 agtggattggagagctgctctctcccctatagtaggtcatattgaatcgaactgggt 148  Q
    |||||||||||| |||||||||||||| | | ||||||| |||| | ||||||||||    
T  267 agtggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 323  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 14805 - 14757
Alignment:
Q  35 gttctttgtgagctttaaagttaattttttgtaacccctttgtatcact 83  Q
    |||||||||||||||| ||| |||||| | |||||| ||||||||||||    
T  14805 gttctttgtgagcttttaagctaatttctcgtaacctctttgtatcact 14757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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