View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14705_low_38 (Length: 214)

Name: NF14705_low_38
Description: NF14705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14705_low_38
NF14705_low_38
[»] chr5 (22 HSPs)
chr5 (1-200)||(7160597-7160796)
chr5 (1-132)||(14520435-14520565)
chr5 (1-108)||(28832462-28832569)
chr5 (1-145)||(11181581-11181724)
chr5 (1-108)||(9353117-9353224)
chr5 (1-108)||(11916757-11916864)
chr5 (1-108)||(24553312-24553419)
chr5 (1-141)||(15464739-15464878)
chr5 (1-108)||(17003744-17003851)
chr5 (1-108)||(31300380-31300487)
chr5 (1-102)||(19588950-19589051)
chr5 (1-118)||(10281957-10282076)
chr5 (1-108)||(42127155-42127262)
chr5 (1-145)||(36932098-36932240)
chr5 (1-108)||(38219605-38219714)
chr5 (1-108)||(35387869-35387978)
chr5 (8-108)||(12083962-12084062)
chr5 (1-104)||(3880505-3880610)
chr5 (7-104)||(33030728-33030824)
chr5 (39-132)||(28750866-28750958)
chr5 (36-132)||(39468757-39468852)
chr5 (1-108)||(24136055-24136165)
[»] chr4 (33 HSPs)
chr4 (1-159)||(5112442-5112600)
chr4 (1-132)||(5268962-5269092)
chr4 (4-131)||(3777757-3777883)
chr4 (1-132)||(10047586-10047716)
chr4 (1-108)||(16623078-16623185)
chr4 (1-132)||(5143465-5143595)
chr4 (1-108)||(8689281-8689388)
chr4 (1-108)||(16628657-16628764)
chr4 (1-140)||(38152191-38152330)
chr4 (3-108)||(5396456-5396561)
chr4 (1-108)||(25861818-25861925)
chr4 (1-118)||(24334016-24334135)
chr4 (1-132)||(6743177-6743307)
chr4 (1-108)||(42599360-42599466)
chr4 (1-108)||(36315015-36315122)
chr4 (1-108)||(36329224-36329331)
chr4 (1-131)||(31985396-31985525)
chr4 (1-108)||(5147883-5147990)
chr4 (27-104)||(6542380-6542457)
chr4 (9-118)||(3793853-3793964)
chr4 (1-108)||(28468319-28468428)
chr4 (4-118)||(39774080-39774194)
chr4 (1-111)||(1983082-1983193)
chr4 (27-118)||(51336942-51337033)
chr4 (1-141)||(54867387-54867523)
chr4 (27-140)||(4587815-4587927)
chr4 (40-129)||(6677335-6677424)
chr4 (27-104)||(48893841-48893920)
chr4 (27-130)||(52082856-52082958)
chr4 (1-82)||(18377564-18377645)
chr4 (3-124)||(37782070-37782192)
chr4 (27-108)||(24742176-24742259)
chr4 (70-130)||(52093905-52093965)
[»] chr7 (36 HSPs)
chr7 (3-134)||(44847885-44848015)
chr7 (1-135)||(3047459-3047593)
chr7 (1-141)||(2479541-2479680)
chr7 (4-108)||(23402798-23402902)
chr7 (1-108)||(20284294-20284401)
chr7 (1-118)||(5817045-5817162)
chr7 (1-108)||(46516090-46516197)
chr7 (1-108)||(21989113-21989220)
chr7 (1-108)||(47263871-47263978)
chr7 (1-107)||(9184960-9185066)
chr7 (1-104)||(2647486-2647589)
chr7 (1-108)||(4796454-4796560)
chr7 (1-108)||(33332235-33332342)
chr7 (1-108)||(9189791-9189899)
chr7 (1-118)||(29160010-29160129)
chr7 (1-108)||(2580595-2580701)
chr7 (1-108)||(18413845-18413954)
chr7 (1-108)||(21640015-21640124)
chr7 (1-107)||(21646213-21646321)
chr7 (8-107)||(18408976-18409077)
chr7 (39-132)||(49091932-49092024)
chr7 (1-77)||(9235398-9235474)
chr7 (42-132)||(79634-79723)
chr7 (18-102)||(19502073-19502156)
chr7 (27-135)||(43864106-43864213)
chr7 (1-108)||(1533222-1533332)
chr7 (1-49)||(21983491-21983539)
chr7 (1-57)||(35961022-35961078)
chr7 (1-57)||(49091868-49091924)
chr7 (36-135)||(18126506-18126604)
chr7 (27-102)||(24526096-24526170)
chr7 (36-102)||(6570489-6570554)
chr7 (70-132)||(30024973-30025035)
chr7 (27-108)||(2058204-2058287)
chr7 (70-142)||(12098113-12098185)
chr7 (70-102)||(40808485-40808517)
[»] chr3 (46 HSPs)
chr3 (4-135)||(24694914-24695044)
chr3 (1-132)||(40592533-40592663)
chr3 (1-135)||(8370237-8370370)
chr3 (1-145)||(16264554-16264697)
chr3 (1-132)||(21711427-21711557)
chr3 (1-132)||(27974703-27974833)
chr3 (1-132)||(36029298-36029428)
chr3 (1-108)||(1736078-1736185)
chr3 (4-107)||(3323466-3323569)
chr3 (1-108)||(27986230-27986337)
chr3 (1-132)||(47923655-47923785)
chr3 (4-108)||(6794489-6794593)
chr3 (1-141)||(33386417-33386556)
chr3 (1-145)||(39032293-39032435)
chr3 (1-131)||(37725880-37726009)
chr3 (1-118)||(3715764-3715883)
chr3 (4-108)||(26299196-26299300)
chr3 (4-108)||(48438424-48438527)
chr3 (13-104)||(4386755-4386846)
chr3 (1-108)||(26928373-26928480)
chr3 (1-127)||(32143528-32143653)
chr3 (1-106)||(1417267-1417372)
chr3 (1-141)||(27453165-27453302)
chr3 (1-118)||(25795985-25796104)
chr3 (15-135)||(27026925-27027044)
chr3 (1-117)||(47649775-47649893)
chr3 (1-107)||(25929171-25929276)
chr3 (1-108)||(35925683-35925792)
chr3 (4-108)||(37466503-37466607)
chr3 (1-108)||(3328131-3328238)
chr3 (1-108)||(8126835-8126942)
chr3 (1-108)||(1306155-1306264)
chr3 (36-118)||(23410537-23410619)
chr3 (27-135)||(27038282-27038389)
chr3 (27-118)||(23392108-23392199)
chr3 (36-107)||(40844895-40844966)
chr3 (1-104)||(21353767-21353875)
chr3 (1-51)||(18552716-18552766)
chr3 (27-132)||(53921702-53921806)
chr3 (36-135)||(29812925-29813023)
chr3 (27-102)||(32890998-32891072)
chr3 (27-108)||(2671364-2671447)
chr3 (27-108)||(9091079-9091162)
chr3 (70-102)||(9666709-9666741)
chr3 (4-56)||(30709615-30709667)
chr3 (27-108)||(40372574-40372657)
[»] scaffold0087 (2 HSPs)
scaffold0087 (1-132)||(36594-36724)
scaffold0087 (1-141)||(43714-43853)
[»] chr8 (31 HSPs)
chr8 (1-108)||(19175539-19175646)
chr8 (1-135)||(4456233-4456366)
chr8 (4-132)||(4696370-4696497)
chr8 (1-132)||(7412545-7412675)
chr8 (4-108)||(5702265-5702369)
chr8 (4-132)||(3051328-3051456)
chr8 (1-132)||(28307767-28307898)
chr8 (1-118)||(9054195-9054312)
chr8 (1-102)||(19752185-19752286)
chr8 (1-130)||(23799340-23799468)
chr8 (1-104)||(26403015-26403121)
chr8 (1-108)||(1261735-1261844)
chr8 (8-142)||(5990314-5990446)
chr8 (1-104)||(6127428-6127533)
chr8 (1-90)||(7492976-7493065)
chr8 (1-83)||(31071035-31071119)
chr8 (27-118)||(9765626-9765718)
chr8 (27-132)||(15212651-15212755)
chr8 (1-108)||(26288097-26288206)
chr8 (1-108)||(26301354-26301463)
chr8 (1-108)||(26313348-26313457)
chr8 (36-132)||(30143207-30143302)
chr8 (40-102)||(3318761-3318823)
chr8 (27-132)||(42498059-42498163)
chr8 (70-102)||(11712244-11712276)
chr8 (46-102)||(41266862-41266918)
chr8 (27-102)||(41365046-41365120)
chr8 (36-102)||(3303878-3303943)
chr8 (36-97)||(4162400-4162460)
chr8 (36-102)||(19491906-19491974)
chr8 (70-102)||(1292704-1292736)
[»] chr2 (35 HSPs)
chr2 (1-132)||(33528386-33528516)
chr2 (1-132)||(40015130-40015260)
chr2 (1-135)||(28258936-28259069)
chr2 (1-106)||(36757549-36757654)
chr2 (4-132)||(15903651-15903779)
chr2 (1-108)||(13569534-13569641)
chr2 (1-108)||(21630150-21630257)
chr2 (1-108)||(34389056-34389163)
chr2 (1-107)||(10445253-10445359)
chr2 (1-108)||(14698794-14698901)
chr2 (1-108)||(33118340-33118447)
chr2 (1-118)||(31056248-31056367)
chr2 (1-104)||(2837816-2837922)
chr2 (1-104)||(35397714-35397817)
chr2 (1-108)||(40739039-40739146)
chr2 (1-118)||(8040269-8040388)
chr2 (12-108)||(17865421-17865517)
chr2 (1-118)||(34682106-34682225)
chr2 (3-108)||(8389934-8390039)
chr2 (8-107)||(20522434-20522533)
chr2 (1-108)||(23078256-23078363)
chr2 (4-93)||(39483141-39483230)
chr2 (4-104)||(1344333-1344435)
chr2 (1-107)||(10707038-10707144)
chr2 (3-104)||(2869481-2869582)
chr2 (36-118)||(42269609-42269693)
chr2 (1-108)||(3491957-3492066)
chr2 (7-108)||(25409842-25409945)
chr2 (27-102)||(11690396-11690470)
chr2 (37-132)||(38312105-38312199)
chr2 (13-102)||(3278217-3278307)
chr2 (27-132)||(36988274-36988378)
chr2 (70-132)||(6595247-6595309)
chr2 (15-99)||(41586344-41586429)
chr2 (27-108)||(11098705-11098788)
[»] chr1 (34 HSPs)
chr1 (1-108)||(3281912-3282019)
chr1 (1-108)||(47098610-47098717)
chr1 (1-108)||(47102624-47102731)
chr1 (1-118)||(19073133-19073252)
chr1 (1-118)||(19121023-19121142)
chr1 (1-132)||(13598605-13598735)
chr1 (1-108)||(29652018-29652125)
chr1 (1-108)||(37069972-37070079)
chr1 (1-141)||(13604375-13604514)
chr1 (1-118)||(40816589-40816708)
chr1 (2-108)||(32889644-32889750)
chr1 (1-118)||(22819636-22819753)
chr1 (4-118)||(47703708-47703824)
chr1 (1-108)||(21536355-21536462)
chr1 (3-108)||(27104187-27104291)
chr1 (1-108)||(9476467-9476574)
chr1 (1-107)||(19361215-19361322)
chr1 (1-108)||(19358625-19358733)
chr1 (1-132)||(9022668-9022798)
chr1 (1-108)||(26644683-26644790)
chr1 (1-108)||(19366089-19366198)
chr1 (1-108)||(24202550-24202659)
chr1 (1-60)||(16124347-16124406)
chr1 (27-132)||(10925088-10925192)
chr1 (40-104)||(17345350-17345414)
chr1 (27-140)||(31659094-31659207)
chr1 (39-131)||(28223632-28223723)
chr1 (27-102)||(13138173-13138247)
chr1 (27-102)||(50169409-50169483)
chr1 (27-97)||(4552836-4552905)
chr1 (1-46)||(19379917-19379962)
chr1 (70-131)||(28220467-28220528)
chr1 (36-102)||(41360807-41360875)
chr1 (70-142)||(28265807-28265879)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-145)||(8166-8309)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-108)||(85888-85995)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-132)||(5890-6020)
scaffold0006 (1-141)||(133032-133171)
scaffold0006 (1-132)||(2699-2828)
[»] chr6 (21 HSPs)
chr6 (1-108)||(22709215-22709322)
chr6 (1-107)||(22963904-22964010)
chr6 (1-107)||(23824383-23824489)
chr6 (1-141)||(5757231-5757370)
chr6 (1-108)||(5017281-5017388)
chr6 (1-108)||(31936780-31936887)
chr6 (1-102)||(31979717-31979818)
chr6 (1-108)||(24435757-24435863)
chr6 (4-108)||(5572028-5572132)
chr6 (1-108)||(31086259-31086366)
chr6 (1-118)||(21801117-21801236)
chr6 (1-104)||(14521878-14521984)
chr6 (36-107)||(21272775-21272846)
chr6 (47-145)||(18234334-18234431)
chr6 (4-117)||(31076712-31076825)
chr6 (65-108)||(10076976-10077019)
chr6 (3-77)||(21356244-21356318)
chr6 (1-108)||(5674548-5674658)
chr6 (1-52)||(18233051-18233102)
chr6 (72-135)||(23896628-23896690)
chr6 (27-132)||(9183230-9183334)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-133)||(45403-45535)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-118)||(10936-11055)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-108)||(17733-17842)
scaffold0188 (1-108)||(23826-23935)
[»] scaffold0176 (1 HSPs)
scaffold0176 (11-108)||(17466-17563)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-150)||(23737-23887)
[»] scaffold0477 (1 HSPs)
scaffold0477 (55-104)||(5745-5794)
[»] scaffold0060 (1 HSPs)
scaffold0060 (40-93)||(33368-33421)


Alignment Details
Target: chr5 (Bit Score: 176; Significance: 5e-95; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 7160796 - 7160597
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7160796 tccttccaatgatgaaatctcactgtccaaggtgattacaatgtttcccaatccaagagaacctcactacaaagacactcaaccctaaagttacctcatt 7160697  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaaactgaattgtgaagcttaaatagtgccctgcaactgactcaattgtgtcagaataatct 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7160696 tgtaatcccaaatttctcattcttcaagctcttctcaaaaagctgaactgtgaagcttaaatagtgccctgcaactgactcaatcgtgtcagaataatct 7160597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 14520435 - 14520565
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  14520435 tccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 14520534  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| | || ||||||  ||||||||||||    
T  14520535 tgtaat-ctaagtttctctctcttcaagctct 14520565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28832462 - 28832569
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||    
T  28832462 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaactctaaagttacctcctt 28832561  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  28832562 tgtaatcc 28832569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 11181724 - 11181581
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||| |||||  |||||||  |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||| ||    
T  11181724 tccttccaatggtgaaatttcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccataaagttacctcctt 11181625  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaaactg 145  Q
    |||||  |||| ||||||  |||||||||||| ||  ||||||||    
T  11181624 tgtaa-accaagtttctctctcttcaagctctacttcaaaaactg 11181581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9353224 - 9353117
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| ||    
T  9353224 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacacttaaccctaaagttacctcctt 9353125  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  9353124 tgtaatcc 9353117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11916864 - 11916757
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||| ||    
T  11916864 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaactcaaccctaaagttacctcctt 11916765  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  11916764 tgtaatcc 11916757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24553419 - 24553312
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||| |||||||||||||||||  |||||||  |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||    
T  24553419 tccttctaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaacccttaagttacctcctt 24553320  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  24553319 tgtaatcc 24553312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 15464739 - 15464878
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||| ||||||||||| |||||||| || |||||||||||||||||||||||||||| |||  ||    
T  15464739 tccttccaatggtgaaatctcactacccaaggtgtttacgatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagtttccttctt 15464838  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaa 141  Q
    |||||| |||| ||||||  |||||||||||| ||| ||||    
T  15464839 tgtaat-ccaagtttctctctcttcaagctctcctccaaaa 15464878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17003851 - 17003744
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||| || ||||||||||| ||||||||||||| ||||||||||||||| ||| ||    
T  17003851 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttccaaacccaagagaacctcactacaaagacattcaaccctaaagttatctcctt 17003752  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  17003751 tgtaatcc 17003744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31300487 - 31300380
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||| ||    
T  31300487 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctcaacccaagagaacctcactacaaagacactcaaccttaaagttacctcctt 31300388  T
Q  101 tgtaatcc 108  Q
    || |||||    
T  31300387 tgcaatcc 31300380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19588950 - 19589051
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||| ||||| |  |||||||||||||||| |||||||| || ||||||||||||||||||||||||| ||||||| ||    
T  19588950 tccttccaatggtgaaatctcactgcccaagatgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaaattacctcctt 19589049  T
Q  101 tg 102  Q
    ||    
T  19589050 tg 19589051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 10281957 - 10282076
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||| ||| ||  ||||||||| |||||||||||||||||||||||||||||||||     
T  10281957 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcacaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctcc 10282056  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| || ||| ||||||    
T  10282057 tttgtattctcaagtttctc 10282076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42127262 - 42127155
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||   ||||||||||| ||| ||||||||||| ||||||||||| |||||||| |||||||||||| ||    
T  42127262 tccttccaatggtgaaatctcactacccaaggtgtatacaatgtttctcaacccaagagaacctcactacaaagatactcaaccttaaagttacctcctt 42127163  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  42127162 tgtaatcc 42127155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 36932240 - 36932098
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||| |||| ||    
T  36932240 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcatcactataaagacactcaaccctaaagttccctcctt 36932141  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaaactg 145  Q
    || ||| |||| ||||||  ||||| |||||| ||| ||||||||    
T  36932140 tgcaat-ccaagtttctctctcttc-agctctcctccaaaaactg 36932098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38219605 - 38219714
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||  ||||| |||||||| || ||||||||||||||||||||||| |||| ||||     
T  38219605 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcc 38219704  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  38219705 tttgtaatcc 38219714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35387869 - 35387978
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatg--tttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  ||||||| |||||||||  ||| |||| |||||||| || | ||||||||||||||||||||| |||| ||||     
T  35387869 tccttccaatggtgaaatctcactacccaaggtgattacaatgttttttccaacccaagagaccctctctacaaagacactcaaccctagagttccctcc 35387968  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  35387969 tttgtaatcc 35387978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 12084062 - 12083962
Alignment:
Q  8 aatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatc 107  Q
    ||||||||| |||||||  |||||||  ||| ||||||| |||| |||||||| || ||||| ||||||||||||||||||||||||||| |||||||||    
T  12084062 aatggtgaattctcactacccaaggtgtttaaaatgtttaccaacccaagagatcctcactataaagacactcaaccctaaagttacctcctttgtaatc 12083963  T
Q  108 c 108  Q
    |    
T  12083962 c 12083962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3880505 - 3880610
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatc--caagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    |||||||||||||||||||||||   |||| ||  |||||||||||| ||| |  |||||||||| |||||||| |||||||||| || ||||||||||     
T  3880505 tccttccaatggtgaaatctcacaacccaatgtgtttacaatgtttctcaaccctcaagagaacctcactacaaggacactcaactctcaagttacctcc 3880604  T
Q  99 tttgta 104  Q
    ||||||    
T  3880605 tttgta 3880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 33030824 - 33030728
Alignment:
Q  7 caatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgta 104  Q
    ||||||||||||||||||  ||||| | |||||||| |||| ||| ||||||||||| |  |||||| | ||||||||||||||||||||| ||||||    
T  33030824 caatggtgaaatctcactacccaagatgattacaatatttctcaacccaagagaacctcgttacaaa-atactcaaccctaaagttacctcttttgta 33030728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 28750866 - 28750958
Alignment:
Q  39 caatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctct 132  Q
    ||||||||||||| ||||||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||||||||    
T  28750866 caatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctct 28750958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 39468757 - 39468852
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||||||||||||| ||||||||||   | |  |||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||||||||    
T  39468757 ttacaatgtttcccaacccaagagaactctaatg-aaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctct 39468852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24136055 - 24136165
Alignment:
Q  1 tccttccaatggtgaaatc-tcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctc 97  Q
    |||||||||||||||| || |||||  ||||||| ||||||||||||  ||||| ||||||||  |   ||||||||||||||||||||   ||| ||||    
T  24136055 tccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactttctacaaagacactcaaccctttggttccctc 24136154  T
Q  98 atttgtaatcc 108  Q
     ||||||||||    
T  24136155 ctttgtaatcc 24136165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 5112442 - 5112600
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||||||||||| ||| |||||||||||||| |||||| ||||||| ||    
T  5112442 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcacaacaaagacactcaaacctaaaattacctcctt 5112541  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaaactgaattgtgaagctta 159  Q
    ||||||| ||| ||||||  |||||||||||| || |||||||||||||||| ||||||    
T  5112542 tgtaatctcaagtttctctctcttcaagctctcctaaaaaaactgaattgtgtagctta 5112600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 5269092 - 5268962
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  5269092 tccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 5268993  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  5268992 tgtaat-ccaagtttctctctcttcaagctct 5268962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 3777757 - 3777883
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  3777757 ttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgt 3777856  T
Q  104 aatcccaaatttctcattcttcaagctc 131  Q
    ||| |||| ||||||  |||||||||||    
T  3777857 aat-ccaagtttctctctcttcaagctc 3777883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10047586 - 10047716
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || || |||||||||||||||||||||||||||||| ||    
T  10047586 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcattacaaagacactcaaccctaaagttacctcctt 10047685  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  10047686 tgtaat-ccaagtttctctctcttcaagctct 10047716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16623185 - 16623078
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  16623185 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 16623086  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  16623085 tgtaatcc 16623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 5143465 - 5143595
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  | |||||  |||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||| |     
T  5143465 tccttccaatggtgaaatctcactacctaaggtgtttacaaagtttcccaatccaagagatcctcactacaaagacactcaaccctaaagttacctcctc 5143564  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| |||||| | |||||||||||    
T  5143565 tgtaat-ccaagtttctcttacttcaagctct 5143595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8689388 - 8689281
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| ||    
T  8689388 tccttccaatggtgaaatctcactatccaaggtgtttaaaatgtttcccaacccaagagatcctcactacaaagacactaaaccctaaagttacctcctt 8689289  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  8689288 tgtaatcc 8689281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16628764 - 16628657
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  16628764 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 16628665  T
Q  101 tgtaatcc 108  Q
    || |||||    
T  16628664 tgcaatcc 16628657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38152330 - 38152191
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||| | |||||  |||||||  ||||||| |||||||  |||||||| || ||||||||||||||||||||||||||||||||||||    
T  38152330 tccttccaatggtgaattgtcactacccaaggtgtttacaatatttcccatcccaagagatcctcactacaaagacactcaaccctaaagttacctcatt 38152231  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaa 140  Q
    |||||||| || ||||||  ||||| ||||||| ||||||    
T  38152230 tgtaatccaaattttctctctcttccagctcttttcaaaa 38152191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 5396561 - 5396456
Alignment:
Q  3 cttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    ||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||| ||||| ||||    
T  5396561 cttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagtaacctcctttg 5396462  T
Q  103 taatcc 108  Q
    ||||||    
T  5396461 taatcc 5396456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25861925 - 25861818
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||   ||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||  ||    
T  25861925 tccttccaatggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttaccttctt 25861826  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  25861825 tgtaatcc 25861818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24334016 - 24334135
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||  ||||||||| |||||||||||| |||||||||||||||||||      
T  24334016 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagactctcaaccctaaagttaccttc 24334115  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| |||||| ||||||    
T  24334116 tttgtattcccaagtttctc 24334135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 6743307 - 6743177
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||| |  |||||||  |||||||||||||||| |||||||| || | |||||||||||||||| ||| |||||||||| ||    
T  6743307 tccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcgctacaaagacactcaaacctcaagttacctcctt 6743208  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  6743207 tgtaat-ccaagtttctctctcttcaagctct 6743177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42599466 - 42599360
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||| |||||||||||| | ||||||||| |||||||||||||||||| |||||||||||||| ||    
T  42599466 tccttccaatggtgaaatctcactacccaaggtgtttagaatgtttcccaaccgaagagaacctcactacaaagacactcaa-cctaaagttacctcctt 42599368  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  42599367 tgtaatcc 42599360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36315122 - 36315015
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||| ||||||||||  |||| ||  |||||||||||||||| |||||||| || | ||||||||||||| ||||||||||||||||| ||    
T  36315122 tccttccaatggttaaatctcactacccaatgtgtttacaatgtttcccaacccaagagatcctctctacaaagacactaaaccctaaagttacctcctt 36315023  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  36315022 tgtaatcc 36315015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36329331 - 36329224
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||| ||||||||||  |||| ||  |||||||||||||||| |||||||| || | ||||||||||||| ||||||||||||||||| ||    
T  36329331 tccttccaatggttaaatctcactacccaatgtgtttacaatgtttcccaacccaagagatcctctctacaaagacactaaaccctaaagttacctcctt 36329232  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  36329231 tgtaatcc 36329224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 31985525 - 31985396
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||| |||||||||| |||||  |||||||  |||||||||||||||| |||||||| || || |||||| |||||||||||||||||| |||| ||    
T  31985525 tccttcccatggtgaaatttcactacccaaggtgtttacaatgtttcccaacccaagagatcctcaatacaaaaacactcaaccctaaagttccctcctt 31985426  T
Q  101 tgtaatcccaaatttctcattcttcaagctc 131  Q
    |||||| |||| ||||||  |||||||||||    
T  31985425 tgtaat-ccaagtttctctctcttcaagctc 31985396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5147883 - 5147990
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||| | ||||| ||  ||||||||||||||||  ||||||| ||  |||||||||||||| ||||||||||||||||| |     
T  5147883 tccttccaatggtgaaatctcattatccaatgtgtttacaatgtttcccaactcaagagatccttactacaaagacactaaaccctaaagttacctcctg 5147982  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  5147983 tgtaatcc 5147990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 6542380 - 6542457
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgta 104  Q
    |||||||  |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  6542380 ccaaggtgtttacaatgtttcccaacccaagagaacctcattacaaagacactcaaccctaaagttacctcctttgta 6542457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 3793964 - 3793853
Alignment:
Q  9 atggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaat 106  Q
    ||||||||||||||||  |||||||  ||||||||||| |||| ||  ||||||||| ||||| ||||||||||||||||||||||||||| ||| || |    
T  3793964 atggtgaaatctcactacccaaggtgtttacaatgttttccaaccctcaagagaacctcactataaagacactcaaccctaaagttacctcctttatatt 3793865  T
Q  107 cccaaatttctc 118  Q
    ||||| ||||||    
T  3793864 cccaagtttctc 3793853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28468428 - 28468319
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  ||||||| |||  ||||| |||||||| || ||||||||||||||| ||||||| |||| ||||     
T  28468428 tccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacacttaaccctagagttccctcc 28468329  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  28468328 tttgtaatcc 28468319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 39774194 - 39774080
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||| ||||||  |||||||  ||||||||||||||||  |||||||||| |  |||||| |  |||||||||||||||||||| |||||    
T  39774194 ttccaatggtgaaaactcactacccaaggtgtttacaatgtttcccaactcaagagaacctcgttacaaataatctcaaccctaaagttacctcctttgt 39774095  T
Q  104 aatcccaaatttctc 118  Q
    || ||||| ||||||    
T  39774094 aaacccaagtttctc 39774080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1983193 - 1983082
Alignment:
Q  1 tccttccaatggtgaaa-tctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcat 99  Q
    ||||||||||||||||| ||| |||  ||| |||  |||||||||| | ||| |||||| |||| ||||||||||||||||||||||||||||||||  |    
T  1983193 tccttccaatggtgaaaatcttactaaccagggtgtttacaatgttacacaacccaagataacctcactacaaagacactcaaccctaaagttaccttct 1983094  T
Q  100 ttgtaatcccaa 111  Q
    |||||| |||||    
T  1983093 ttgtaaacccaa 1983082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 51337033 - 51336942
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctc 118  Q
    |||||||  ||||||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||| || |||||| ||| || ||||||    
T  51337033 ccaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacattcaaccctaaagttacttcctttgtattcctaagtttctc 51336942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 54867387 - 54867523
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||  ||  ||||||  |   |||| ||||||||  | ||||||||||||||||||||||||||||||||| ||    
T  54867387 tccttccaatggtgaaatctcactacccatagtgtttacaactt---ccaacccaagagattctcactacaaagacactcaaccctaaagttacctcctt 54867483  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaa 141  Q
    |||||| |||| ||||||  |||||||||||| ||| ||||    
T  54867484 tgtaat-ccaagtttctctctcttcaagctctcctccaaaa 54867523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 4587927 - 4587815
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactac-aaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttc 125  Q
    |||||||  |||||||||||||||| ||| ||||||| |||||| ||||||||| ||||||||||||| |||||||||| ||| |  ||||||  ||||     
T  4587927 ccaaggtgtttacaatgtttcccaacccatgagaacctcactacaaaagacacttaaccctaaagttatctcatttgtattcctaggtttctc--tcttg 4587830  T
Q  126 aagctcttctcaaaa 140  Q
    ||||||| |||||||    
T  4587829 aagctctcctcaaaa 4587815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 6677424 - 6677335
Alignment:
Q  40 aatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagc 129  Q
    |||||||||||| ||||||||||| |   ||||||||||||||||||||||||||||| ||||  | || ||||||||| ||||| ||||    
T  6677424 aatgtttcccaacccaagagaacccctgaacaaagacactcaaccctaaagttacctcctttgataccctaaatttctctttcttgaagc 6677335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 48893841 - 48893920
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctcatttgta 104  Q
    |||||||  ||||||||||||| || ||  ||||||||| |||||||||||||||||||||| || ||||||| ||||||    
T  48893841 ccaaggtgtttacaatgtttccaaaccctaaagagaacctcactacaaagacactcaaccctcaaattacctcctttgta 48893920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 52082856 - 52082958
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  |||||||||||||||| ||||||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||    
T  52082856 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttca 52082954  T
Q  127 agct 130  Q
    ||||    
T  52082955 agct 52082958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18377564 - 18377645
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaa 82  Q
    ||||||||||||| |||||||| |  ||||||   ||||||||||| |||  ||||||||||| ||||||||| ||||||||    
T  18377564 tccttccaatggtaaaatctcattacccaaggggtttacaatgttttccatcccaagagaacctcactacaaatacactcaa 18377645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 37782070 - 37782192
Alignment:
Q  3 cttccaatggtgaaatctcactgtccaaggtaattacaa-tgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcattt 101  Q
    ||||||||  ||||||||||||  |||||||  |||||| ||||| |||| |||||||| || | |  |||||| | ||||| |||||||||||||||||    
T  37782070 cttccaataatgaaatctcactacccaaggtgtttacaaatgttttccaacccaagagagcctctcaccaaagatattcaactctaaagttacctcattt 37782169  T
Q  102 gtaatcccaaatttctcattctt 124  Q
    |   |||||||||| || |||||    
T  37782170 gatttcccaaatttttctttctt 37782192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 24742176 - 24742259
Alignment:
Q  27 ccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcc 108  Q
    ||||||| ||||||||||||  ||||| ||||||||  | | ||||||||||||||||||||   ||| |||| ||||||||||    
T  24742176 ccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatcc 24742259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 52093905 - 52093965
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagct 130  Q
    ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||||||    
T  52093905 caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagct 52093965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 44848015 - 44847885
Alignment:
Q  3 cttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| |||     
T  44848015 cttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctccttta 44847916  T
Q  103 taatcccaaatttctcattcttcaagctcttc 134  Q
    |||| |||| ||||||  ||||||||||||||    
T  44847915 taat-ccaagtttctctctcttcaagctcttc 44847885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 3047459 - 3047593
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||| ||||||||||||  ||||| | |||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  3047459 tccttccaatgatgaaatctcactacccaagatgattatagtgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctt 3047558  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttct 135  Q
    ||||||||||| ||||||  |||| ||||||||||    
T  3047559 tgtaatcccaagtttctctctcttaaagctcttct 3047593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 2479541 - 2479680
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||| |||||||||||||||||||||| |||| ||    
T  2479541 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagttccctcctt 2479640  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaa 141  Q
    |||||| |||| ||||||  |||||||||||||||| ||||    
T  2479641 tgtaat-ccaagtttctctctcttcaagctcttctccaaaa 2479680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 23402902 - 23402798
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||||||||||  |||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  23402902 ttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgt 23402803  T
Q  104 aatcc 108  Q
    |||||    
T  23402802 aatcc 23402798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20284294 - 20284401
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  20284294 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctt 20284393  T
Q  101 tgtaatcc 108  Q
    | ||||||    
T  20284394 tataatcc 20284401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5817162 - 5817045
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||| | || |||||| |||||||||||||||||||| |||||||||||| ||    
T  5817162 tccttccaatggtgaaatctcactccccaaggtatttacaatgtttcccaaccaaatagaacctcactacaaagacactcaaccataaagttacctcctt 5817063  T
Q  101 tgtaatcccaaatttctc 118  Q
    |||| |||||| ||||||    
T  5817062 tgtattcccaagtttctc 5817045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 46516197 - 46516090
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||| ||    
T  46516197 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagagatcctcactacaaagacactcaaccctaaagttacctcctt 46516098  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  46516097 tgtaatcc 46516090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21989113 - 21989220
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||| ||||||||||  |||||||  |||||||||||||||| |||||||| || |||||||||||||||||| |||||||||||||| ||    
T  21989113 tccttccaatggtaaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaacctaaagttacctcctt 21989212  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  21989213 tgtaatcc 21989220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 47263871 - 47263978
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||| | ||||||  | ||||||||||||||||||||||||||||||||| ||    
T  47263871 tccttccaatggtgaaatctcactacccaaggtatttacaatgtttcccaaccgaagagattctcactacaaagacactcaaccctaaagttacctcctt 47263970  T
Q  101 tgtaatcc 108  Q
    | ||||||    
T  47263971 tataatcc 47263978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9185066 - 9184960
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||||||  |||||||||| ||||||||||||||||||||| ||    
T  9185066 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaaccttactacaaagatactcaaccctaaagttacctcctt 9184967  T
Q  101 tgtaatc 107  Q
    || ||||    
T  9184966 tgcaatc 9184960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2647589 - 2647486
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||| ||    
T  2647589 tccttccaatggtgaaatctcactacccaaggtgcttaccatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcctt 2647490  T
Q  101 tgta 104  Q
    ||||    
T  2647489 tgta 2647486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4796560 - 4796454
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||| |||| |||||||| || |||||||||||||||||| |||||||||||||| ||    
T  4796560 tccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacactcaa-cctaaagttacctcctt 4796462  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  4796461 tgtaatcc 4796454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33332342 - 33332235
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  ||||| |  |||||||||||| ||| |||||||||||  |||||||| ||||||||||||||||||||||| ||    
T  33332342 tccttccaatggtgaaatctcactacccaagatgtttacaatgtttctcaacccaagagaaccttactacaaaaacactcaaccctaaagttacctcctt 33332243  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  33332242 tgtaatcc 33332235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9189899 - 9189791
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaag-acactcaaccctaaagttacctcat 99  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||| ||| |    
T  9189899 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaaccttactacaaagaacactcaaccctaaagttatctcct 9189800  T
Q  100 ttgtaatcc 108  Q
    ||| |||||    
T  9189799 ttgcaatcc 9189791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29160010 - 29160129
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||| ||||||||||||  |||||||  |||||||||||||||| ||  ||||||||| ||||| ||||||||||||||| |||||||||||     
T  29160010 tccttccaatgttgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactataaagacactcaacccaaaagttacctcc 29160109  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| |||||| ||||||    
T  29160110 tttgtattcccaagtttctc 29160129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2580595 - 2580701
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||| ||||||||||||||||||  |||||||  ||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||    
T  2580595 tcctttcaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagaacctcac-acaaagacactcaaccctaaagttacctcctt 2580693  T
Q  101 tgtaatcc 108  Q
    || |||||    
T  2580694 tgcaatcc 2580701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18413845 - 18413954
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  ||||| |||||  ||||| |||||||| || ||||||||||||||||||||||| |||| ||||     
T  18413845 tccttccaatggtgaaatctcactacccaaggtgtttacattgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcc 18413944  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  18413945 tttgtaatcc 18413954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21640015 - 21640124
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||  ||||| |||||||| || | ||||||||||||||||||||| |||| ||||     
T  21640015 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcc 21640114  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  21640115 tttgtaatcc 21640124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21646213 - 21646321
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||  ||||| |||||||| || | ||||||||||||||||||||| |||| ||||     
T  21646213 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtttcctcc 21646312  T
Q  99 tttgtaatc 107  Q
    |||||||||    
T  21646313 tttgtaatc 21646321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 18408976 - 18409077
Alignment:
Q  8 aatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaa 105  Q
    |||||||||||||||||  |||||||  |||||||||||  ||||| |||||||| || ||||||||||||||||||||||| |||| |||| |||||||    
T  18408976 aatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaa 18409075  T
Q  106 tc 107  Q
    ||    
T  18409076 tc 18409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 49091932 - 49092024
Alignment:
Q  39 caatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctct 132  Q
    ||||||||||||| |||||| | || || ||||||||||||||||| |||||||||||| |||||||| |||| ||||||  ||||||||||||    
T  49091932 caatgtttcccaacccaagatatcctcagtacaaagacactcaaccttaaagttacctcctttgtaat-ccaagtttctctctcttcaagctct 49092024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9235474 - 9235398
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagaca 77  Q
    ||||| |||||||||||| ||||| ||||||||  |||||||||||||||| ||||||||| | |||||| ||||||    
T  9235474 tccttgcaatggtgaaatatcactatccaaggtgtttacaatgtttcccaacccaagagaatctcactacgaagaca 9235398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 79634 - 79723
Alignment:
Q  42 tgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctct 132  Q
    ||||| |||| |||| ||| || |||||||||||||||||| | |||||||||||| |||||||| |||| ||||||  ||||||||||||    
T  79634 tgttttccaacccaaaagatcctcactacaaagacactcaatcttaaagttacctcctttgtaat-ccaagtttctctctcttcaagctct 79723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 19502156 - 19502073
Alignment:
Q  18 tctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||  |||||||  |||||||||||||||| ||||||||||   | | ||||||| |||||||||||||||||||||||||    
T  19502156 tctcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcatttg 19502073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 43864213 - 43864106
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  |||||||||||||||| ||||||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||    
T  43864213 ccaaggtgtttacaatgtttcccaacccaagagaactttaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttca 43864115  T
Q  127 agctcttct 135  Q
    |||| ||||    
T  43864114 agctattct 43864106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1533332 - 1533222
Alignment:
Q  1 tccttccaatggtgaaatc-tcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctc 97  Q
    |||||||||||||||| || |||||  ||||||| ||||||||||||  ||||| ||||||||  | | ||||||||||||||||||||   ||| ||||    
T  1533332 tccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctc 1533233  T
Q  98 atttgtaatcc 108  Q
     ||||||||||    
T  1533232 ctttgtaatcc 1533222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21983491 - 21983539
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttccc 49  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  21983491 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttccc 21983539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35961022 - 35961078
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaag 57  Q
    ||||||||||||||||||||||||  | |||||  |||||||||||||||| |||||    
T  35961022 tccttccaatggtgaaatctcactacctaaggtgtttacaatgtttcccaacccaag 35961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49091868 - 49091924
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaag 57  Q
    ||||||||||||||||||||||||  |||||||  || ||||||||||||| |||||    
T  49091868 tccttccaatggtgaaatctcactacccaaggtgttttcaatgtttcccaacccaag 49091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 18126604 - 18126506
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctcttct 135  Q
    |||||||||||||||| ||| ||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  | |||||||||||||    
T  18126604 ttacaatgtttcccaacccatgagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctattcaagctcttct 18126506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 24526096 - 24526170
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||  |||||||||||||||| | |||||||||| | | ||||||| |||||||||||||||| ||| ||||    
T  24526096 ccaaggtgtttacaatgtttcccaacctaagagaaccataat-caaagaccctcaaccctaaagttatctcctttg 24526170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 6570554 - 6570489
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||||||||||  |||||||||||  | | ||||||||||||| |||||||||||||| ||||    
T  6570554 ttacaatgtttcccaccccaagagaaccctagt-caaagacactcaatcctaaagttacctcctttg 6570489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 30024973 - 30025035
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctct 132  Q
    ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||||||||    
T  30024973 caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctct 30025035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 2058204 - 2058287
Alignment:
Q  27 ccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcc 108  Q
    ||||||| ||||||||||||  ||||| ||||||||  | | ||||||||||||||||||||   ||| |||| ||||||||||    
T  2058204 ccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatcc 2058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 12098113 - 12098185
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctcttctcaaaaaa 142  Q
    ||||||| |||||||||||||||||||| ||||   |||||| ||| ||  |||| ||||||||| |||||||    
T  12098113 caaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctcttcccaaaaaa 12098185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 40808517 - 40808485
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||||||||||||||||||||||| ||||    
T  40808517 caaagacactcaaccctaaagttacctcctttg 40808485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 24695044 - 24694914
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    ||||||||||||||||||||   |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  24695044 ttccaatggtgaaatctcaccacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgt 24694945  T
Q  104 aatcccaaatttctcattcttcaagctcttct 135  Q
    ||| |||||||||||  |||||||||||||||    
T  24694944 aat-ccaaatttctctctcttcaagctcttct 24694914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 40592663 - 40592533
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  40592663 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 40592564  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  40592563 tgtaat-ccaagtttctctctcttcaagctct 40592533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8370370 - 8370237
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  ||||| |  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  8370370 tccttccaatggtgaaatctcactacccaagatgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 8370271  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttct 135  Q
    |||||| |||| ||||||  |||||||||||||||    
T  8370270 tgtaat-ccaagtttctctctcttcaagctcttct 8370237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 16264554 - 16264697
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || || |||||||||||||||||||||||||||||| ||    
T  16264554 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcattacaaagacactcaaccctaaagttacctcctt 16264653  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaaactg 145  Q
    |||||| |||| |||||| | ||||||||||| ||  ||||||||    
T  16264654 tgtaat-ccaagtttctcttacttcaagctctccttcaaaaactg 16264697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 21711427 - 21711557
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||   ||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  21711427 tccttccaatggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 21711526  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  21711527 tgtaat-ccaagtttctctctcttcaagctct 21711557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27974833 - 27974703
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  27974833 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccgacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 27974734  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  27974733 tgtaat-ccaagtttctctctcttcaagctct 27974703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 36029298 - 36029428
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||| ||||||| ||    
T  36029298 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaatttacctcctt 36029397  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| |||||| | |||||||||||    
T  36029398 tgtaat-ccaagtttctcttacttcaagctct 36029428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1736185 - 1736078
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||| ||| || ||||||||||||||||||||||||||||||||| ||    
T  1736185 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctt 1736086  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  1736085 tgtaatcc 1736078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 3323569 - 3323466
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||||||||||  |||||||  |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  3323569 ttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactataaagacactcaaccctaaagttacctcctttgt 3323470  T
Q  104 aatc 107  Q
    ||||    
T  3323469 aatc 3323466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27986337 - 27986230
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || |||||||||||||||||||||||||||| |||| ||    
T  27986337 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctt 27986238  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  27986237 tgtaatcc 27986230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 47923785 - 47923655
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||||||||  | |||||||||||||||||| |||||||||||||| ||    
T  47923785 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagattctcactacaaagacactcaatcctaaagttacctcctt 47923686  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  47923685 tgtaat-ccaagtttctctctcttcaagctct 47923655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 6794593 - 6794489
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||||||||||  |||||||  ||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  6794593 ttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagagaacctcactacaatgacactcaaccctaaagttacctcctttgt 6794494  T
Q  104 aatcc 108  Q
    |||||    
T  6794493 aatcc 6794489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 33386556 - 33386417
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||| ||| |||||||| || ||||||||||||||||||||||||||||  ||| ||    
T  33386556 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctcaacccaagagatcctcactacaaagacactcaaccctaaagttctctcctt 33386457  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaa 141  Q
    |||||| |||| ||||||  |||||||||||| ||| ||||    
T  33386456 tgtaat-ccaagtttctctctcttcaagctctactccaaaa 33386417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 39032435 - 39032293
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||| |||| |||||||| |  ||||||||||||||||||||||||||||||||| ||    
T  39032435 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttaccaacccaagagatct-cactacaaagacactcaaccctaaagttacctcctt 39032337  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaaactg 145  Q
    |||||| |||| ||||||  |||||||||||| ||  ||||||||    
T  39032336 tgtaat-ccaagtttctctctcttcaagctctacttcaaaaactg 39032293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37725880 - 37726009
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||| |||||||||||||||||| ||||||||  ||| |||||||||| | |||||||| || |||||||||||||||||||||||||||| |||| ||    
T  37725880 tcctttcaatggtgaaatctcactatccaaggtgtttataatgtttccccacccaagagatcctcactacaaagacactcaaccctaaagtttcctcctt 37725979  T
Q  101 tgtaatcccaaatttctcattcttcaagctc 131  Q
    |||||| |||| ||||||  |||||||||||    
T  37725980 tgtaat-ccaagtttctctctcttcaagctc 37726009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3715883 - 3715764
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||  ||||||||| ||||||||||||| |||||||||||||||||||     
T  3715883 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacattcaaccctaaagttacctcc 3715784  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| || ||| ||||||    
T  3715783 tttgtattctcaagtttctc 3715764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 26299196 - 26299300
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||| ||| |    
T  26299196 ttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacattcaaccctaaagttacctcctttat 26299295  T
Q  104 aatcc 108  Q
    |||||    
T  26299296 aatcc 26299300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 48438424 - 48438527
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| ||  |||||||||||||||||||||||||||||||| |||||    
T  48438424 ttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaa-ccaagagatccttactacaaagacactcaaccctaaagttacctcctttgt 48438522  T
Q  104 aatcc 108  Q
    |||||    
T  48438523 aatcc 48438527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 4386846 - 4386755
Alignment:
Q  13 tgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgta 104  Q
    ||||||||||||   |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  4386846 tgaaatctcactactcaaggtgattacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgta 4386755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26928480 - 26928373
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||| |  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| |||| ||    
T  26928480 tccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcgtt 26928381  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  26928380 tgtaatcc 26928373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 32143528 - 32143653
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||| |||| |||||||| |  ||||||||||||||||||||||| |||| |||| ||    
T  32143528 tccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcatcactacaaagacactcaaccctagagttccctcctt 32143627  T
Q  101 tgtaatcccaaatttctcattcttcaa 127  Q
    |||||| |||||||||||  |||||||    
T  32143628 tgtaat-ccaaatttctctctcttcaa 32143653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 1417372 - 1417267
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||| ||||||||||||||||||  | || ||  |||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| ||    
T  1417372 tcctttcaatggtgaaatctcactacctaaagtgtttacaatgtttcccaacccaagataacctcactacaaagacactcaaccctaaagttacctcctt 1417273  T
Q  101 tgtaat 106  Q
    ||||||    
T  1417272 tgtaat 1417267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 27453165 - 27453302
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||| |||| |||||||| || ||||||  |||||||||||||||||||| |||| ||    
T  27453165 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcactac--agacactcaaccctaaagttccctcctt 27453262  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaa 141  Q
    |||||| |||| ||||||  ||||||||||||  |||||||    
T  27453263 tgtaat-ccaagtttctctctcttcaagctctcttcaaaaa 27453302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 25795985 - 25796104
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  ||||| |||||||||| ||  |||||| || |||||||||||||||||||||| ||||||||||     
T  25795985 tccttccaatggtgaaatctcactacccaaggtgtttacattgtttcccaaccctcaagagagcctcactacaaagacactcaaccctcaagttacctcc 25796084  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| |||||| ||||||    
T  25796085 tttgtattcccaagtttctc 25796104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 27026925 - 27027044
Alignment:
Q  15 aaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatt 114  Q
    ||||||||||  |||||||  |||||||||||||| |||||||||| || || |||||||||||||||||||||||||||||| |||||||| |||| ||    
T  27026925 aaatctcactacccaaggtgtttacaatgtttccctatccaagagatcctcagtacaaagacactcaaccctaaagttacctcctttgtaat-ccaagtt 27027023  T
Q  115 tctcattcttcaagctcttct 135  Q
    | ||  |||||||||||||||    
T  27027024 tttctctcttcaagctcttct 27027044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47649775 - 47649893
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    |||||| ||||||||||||| |||  |||||||  |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||| |||     
T  47649775 tccttcaaatggtgaaatctaactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttatctcc 47649874  T
Q  99 tttgtaatcccaaatttct 117  Q
    |||||| |||||| |||||    
T  47649875 tttgtattcccaagtttct 47649893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25929276 - 25929171
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||| ||||||||||||||||  ||||| |  ||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||| ||    
T  25929276 tccttccgatggtgaaatctcactacccaag-tgtttacaatgttttccaactcaagagaacctcactacaaagacactcaaccctaaagttacctcctt 25929178  T
Q  101 tgtaatc 107  Q
    |||||||    
T  25929177 tgtaatc 25929171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35925683 - 35925792
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttac--ctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||| ||| || ||||||||||||| ||||||||||||||||  |||     
T  35925683 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacattcaaccctaaagttacatctcc 35925782  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  35925783 tttgtaatcc 35925792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 37466503 - 37466607
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    ||||||||||||||||||||   |||| ||  |||||||||||||||| | ||||||||| ||||||||||||||||| | ||||||||||||| |||||    
T  37466503 ttccaatggtgaaatctcacaacccaaagtgtttacaatgtttcccaacctaagagaacctcactacaaagacactcagctctaaagttacctcctttgt 37466602  T
Q  104 aatcc 108  Q
    |||||    
T  37466603 aatcc 37466607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3328238 - 3328131
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||| ||||||||||||  |||||||  ||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||||||| ||| ||    
T  3328238 tccttccaatgctgaaatctcactacccaaggtgtttacaatgttttccaacccaagagaagctcactacaaagacattcaaccctaaagttatctcctt 3328139  T
Q  101 tgtaatcc 108  Q
    | ||||||    
T  3328138 tctaatcc 3328131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8126835 - 8126942
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||| ||||||||||||  |||||||  |||||||||||||||| |||||| |||| |||||||||||||||||||  ||||||||| |  ||    
T  8126835 tccttccaatgatgaaatctcactacccaaggtgtttacaatgtttcccaacccaagaaaacctcactacaaagacactcaactgtaaagttactttctt 8126934  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  8126935 tgtaatcc 8126942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1306155 - 1306264
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||  ||||| |||||||| || ||||||||||||||||||| ||| |||| ||||     
T  1306155 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaactctagagttccctcc 1306254  T
Q  99 tttgtaatcc 108  Q
    ||| ||||||    
T  1306255 tttataatcc 1306264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 23410537 - 23410619
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctc 118  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||  ||| |||| |||||||| ||||||    
T  23410537 ttacaatgttttccaacccaagagaacctcactacaaagacactcaaccctaaagttctctcctttgcaatcccaagtttctc 23410619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 27038282 - 27038389
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  |||||||||||||| | |||||||| || |||||||||| |||||||||||||||||| ||| |||||||| |||| ||| ||  ||||||    
T  27038282 ccaaggtgtttacaatgtttccctacccaagagatcctcactacaaaggcactcaaccctaaagttatctcctttgtaat-ccaagtttttctctcttca 27038380  T
Q  127 agctcttct 135  Q
    |||||||||    
T  27038381 agctcttct 27038389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 23392108 - 23392199
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctc 118  Q
    |||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||  ||| |||| | |||||| ||||||    
T  23392108 ccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaatttctctcctttgcagtcccaagtttctc 23392199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 40844895 - 40844966
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatc 107  Q
    |||||||||||| ||| |||| ||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  40844895 ttacaatgtttctcaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc 40844966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21353767 - 21353875
Alignment:
Q  1 tccttccaatggtgaaat-ctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactc--aaccctaaagttacc 95  Q
    ||||||||||||||| || ||||||  |||| ||  |||| ||||||||||| ||  ||||||||| ||||||||||||||||  |||||||||||||||    
T  21353767 tccttccaatggtgacattctcactacccaaagtgtttacgatgtttcccaaccctcaagagaacctcactacaaagacactcaaaaccctaaagttacc 21353866  T
Q  96 tcatttgta 104  Q
    || ||||||    
T  21353867 tcctttgta 21353875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18552766 - 18552716
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaa 51  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||||||    
T  18552766 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaa 18552716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 53921702 - 53921806
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  ||||||||||| |||| |||||| ||||  | | ||||||| |||||||||||||||||||||||||   |||||| ||| ||  ||||||    
T  53921702 ccaaggtttttacaatgttttccaacccaagaaaaccctaat-caaagactctcaaccctaaagttacctcatttgatttcccaagtttttctctcttca 53921800  T
Q  127 agctct 132  Q
    ||||||    
T  53921801 agctct 53921806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 29813023 - 29812925
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctcttct 135  Q
    |||||||| ||||||| ||||||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||| |||||||    
T  29813023 ttacaatgcttcccaacccaagagaactttaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaacctcttct 29812925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 32891072 - 32890998
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||  |||||||||||||||  |||||||||||  | | ||||||| |||||||||||||||||||| ||||    
T  32891072 ccaaggtgtttacaatgtttcccaccccaagagaaccctaat-caaagaccctcaaccctaaagttacctcctttg 32890998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 2671447 - 2671364
Alignment:
Q  27 ccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcc 108  Q
    ||||||| ||||||||||||  ||||| ||||||||  | | ||||||||||||||||||||   ||| |||| ||||||||||    
T  2671447 ccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatcc 2671364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 9091162 - 9091079
Alignment:
Q  27 ccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcc 108  Q
    ||||||| ||||||||||||  ||||| ||||||||  | | ||||||||||||||||||||   ||| |||| ||||||||||    
T  9091162 ccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaaccctttggttccctcctttgtaatcc 9091079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 9666709 - 9666741
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttg 102  Q
    ||||||| |||||||||||||||||||||||||    
T  9666709 caaagaccctcaaccctaaagttacctcatttg 9666741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 30709667 - 30709615
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaa 56  Q
    |||||||| ||||||||||||  |||||||  |||||||||||||||| ||||    
T  30709667 ttccaatgatgaaatctcactccccaaggtgtttacaatgtttcccaacccaa 30709615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 40372657 - 40372574
Alignment:
Q  27 ccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcc 108  Q
    ||||||| ||||||||||||  ||||| ||||||||  | | ||||||||||||||||||||   ||| |||| ||||||||||    
T  40372657 ccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatcc 40372574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 36724 - 36594
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  36724 tccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 36625  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  36624 tgtaat-ccaagtttctctctcttcaagctct 36594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 43853 - 43714
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||| ||| || ||||||||||||||||||||||||||||||||| ||    
T  43853 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacactcaaccctaaagttacctcctt 43754  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaa 141  Q
    |||||| |||| ||||||  ||||| |||||| ||| ||||    
T  43753 tgtaat-ccaagtttctctctcttccagctctcctccaaaa 43714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19175646 - 19175539
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||| |||||||||||||  |||||||  ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||    
T  19175646 tccttccaatagtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 19175547  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  19175546 tgtaatcc 19175539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4456233 - 4456366
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||| |||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||| ||    
T  4456233 tccttctaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacagagacactcaaccctaaagttacctcctt 4456332  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttct 135  Q
    |||||| |||| ||||||  |||||||||||||||    
T  4456333 tgtaat-ccaagtttctctctcttcaagctcttct 4456366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 4696497 - 4696370
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||| |||||    
T  4696497 ttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcctttgt 4696398  T
Q  104 aatcccaaatttctcattcttcaagctct 132  Q
    ||| |||| ||||||  ||||||||||||    
T  4696397 aat-ccaagtttctctctcttcaagctct 4696370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 7412545 - 7412675
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||| ||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || | ||||||||||||||||||||||||||||||| ||    
T  7412545 tcctttcaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctctctacaaagacactcaaccctaaagttacctcctt 7412644  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  7412645 tgtaat-ccaagtttctctctcttcaagctct 7412675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 5702369 - 5702265
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||||||||||  |||||||  ||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  5702369 ttccaatggtgaaatctcactacccaaggtgtttacaatatttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgt 5702270  T
Q  104 aatcc 108  Q
    |||||    
T  5702269 aatcc 5702265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 3051328 - 3051456
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    |||||||||||||||||||||  ||||| |  ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||  ||| ||| |    
T  3051328 ttccaatggtgaaatctcactacccaagatgtttacaatgtttcccaactcaagagaaccccactacaaagacactcaaccctaaagttctctcctttat 3051427  T
Q  104 aatcccaaatttctcattcttcaagctct 132  Q
    | |||||| ||||||  ||||||||||||    
T  3051428 agtcccaagtttctctctcttcaagctct 3051456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 28307767 - 28307898
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||| |||||||||||||  |||||||  | |||||||||||||| | |||||||||   ||||||||||||||||| ||||||||||||| ||    
T  28307767 tccttccaattgtgaaatctcactacccaaggtgttaacaatgtttcccaacctaagagaaccgtgctacaaagacactcaactctaaagttacctcctt 28307866  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||||| || ||||||  ||||||||||||    
T  28307867 tgtaatcctaagtttctctctcttcaagctct 28307898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9054312 - 9054195
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  ||||||| |||| ||||||| |||| ||||||||| | ||||||||| |||||||| ||||||||||||| |||    
T  9054312 tccttccaatggtgaaatctcactacccaaggtgattataatgttttccaacccaagagaatctcactacaaaaacactcaatcctaaagttaccttatt 9054213  T
Q  101 tgtaatcccaaatttctc 118  Q
    |||| | |||| ||||||    
T  9054212 tgtatttccaagtttctc 9054195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 19752286 - 19752185
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||| ||||||||||||  |||||||  ||||||| |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  19752286 tccttccaatgatgaaatctcactacccaaggtgtttacaatatttcacaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctt 19752187  T
Q  101 tg 102  Q
    ||    
T  19752186 tg 19752185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 23799468 - 23799340
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||| ||   ||||||  |||||||||| ||||| |||||||| || | ||||||||||||||||||||||||||||||| ||    
T  23799468 tccttccaatggtgaaatctccctactcaaggtgtttacaatgttccccaacccaagagatcctctctacaaagacactcaaccctaaagttacctcctt 23799369  T
Q  101 tgtaatcccaaatttctcattcttcaagct 130  Q
    |||||| |||| ||||||  ||||||||||    
T  23799368 tgtaat-ccaagtttctctctcttcaagct 23799340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26403121 - 26403015
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatc--caagagaaccacactacaaagacactcaaccct-aaagttacctc 97  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |  |||||||||| |||||||||||||||||||||| |||||||||||    
T  26403121 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaaagttacctc 26403022  T
Q  98 atttgta 104  Q
     ||||||    
T  26403021 ctttgta 26403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1261844 - 1261735
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||  ||||| |||||||| || | ||||||||||||||||||||| |||| ||||     
T  1261844 tccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcc 1261745  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  1261744 tttgtaatcc 1261735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 5990446 - 5990314
Alignment:
Q  8 aatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatc 107  Q
    ||||||||||||||||   ||||| | ||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||   |||||| |     
T  5990446 aatggtgaaatctcacaaaccaagatgattacaatgtttcccaacccaagagaacctcact--aaagacactcaaccctaaagttaccgtctttgtattt 5990349  T
Q  108 ccaaatttctcattcttcaagctcttctcaaaaaa 142  Q
    |||| ||||||  ||||| |||||| || ||||||    
T  5990348 ccaagtttctctctcttctagctctccttaaaaaa 5990314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6127428 - 6127533
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  ||||  |  |||||||||||||||| ||  ||||||||| |||||||||||||||||||||| |||||| |||     
T  6127428 tccttccaatggtgaaatctcactacccaaaatgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttatctct 6127527  T
Q  99 tttgta 104  Q
    ||||||    
T  6127528 tttgta 6127533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7493065 - 7492976
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaag 90  Q
    |||||| ||| |||||||||||||  |||||||  |||||||||||||||||||||||||||| |||||||||  | |||||||||||||    
T  7493065 tccttctaattgtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagaacctcactacaaatgctctcaaccctaaag 7492976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31071119 - 31071035
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatg--tttcccaatccaagagaaccacactacaaagacactcaac 83  Q
    ||||||||||||||||||||||||  |||||||  ||||||||  |||||||| |||||||| || |||||||||||||||||||    
T  31071119 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 9765718 - 9765626
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctc 118  Q
    |||||||  |||||||||||||||| ||  ||||||||| |||| ||||||||||||||||| |||||||||| |||||| |||||| ||||||    
T  9765718 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcact-caaagacactcaaccctcaagttacctcctttgtattcccaagtttctc 9765626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 15212755 - 15212651
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  |||||||||||||||| ||||||||||   | | ||||||| |||||||||||||||||||||||||   |||||| ||||||  ||||||    
T  15212755 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcatttgatttcccaagtttctctctcttca 15212657  T
Q  127 agctct 132  Q
    ||||||    
T  15212656 agctct 15212651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26288097 - 26288206
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatg--tttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  ||||||||  ||||||||  |||||||  | | ||||||||||| ||||||||| |||| || |     
T  26288097 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccccc 26288196  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  26288197 tttgtaatcc 26288206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26301354 - 26301463
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatg--tttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  ||||||||  ||||||||  |||||||  | | ||||||||||| ||||||||| |||| || |     
T  26301354 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccccc 26301453  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  26301454 tttgtaatcc 26301463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26313348 - 26313457
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatg--tttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  ||||||||  ||||||||  |||||||  | | ||||||||||| ||||||||| |||| || |     
T  26313348 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccccc 26313447  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  26313448 tttgtaatcc 26313457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 30143302 - 30143207
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||||||||||||| ||||||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||||||||    
T  30143302 ttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctct 30143207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 3318761 - 3318823
Alignment:
Q  40 aatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    ||||||||| || ||||||||||| | |  ||||||| |||||||||||||||||||||||||    
T  3318761 aatgtttcctaacccaagagaacctcccaccaaagaccctcaaccctaaagttacctcatttg 3318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 42498163 - 42498059
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  |||||| ||||||||| ||||||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||    
T  42498163 ccaaggtgtttacaacgtttcccaacccaagagaactttaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttca 42498065  T
Q  127 agctct 132  Q
    ||||||    
T  42498064 agctct 42498059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 11712244 - 11712276
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||||||||||||||||||||||||||||    
T  11712244 caaagacactcaaccctaaagttacctcatttg 11712276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 41266918 - 41266862
Alignment:
Q  46 tcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||| ||||||||||| | |  |||||||| ||||||||||||||||||||||||    
T  41266918 tcccaacccaagagaacctctcaccaaagacattcaaccctaaagttacctcatttg 41266862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 41365046 - 41365120
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||  |||||||||||||||| |||| |||||   | | ||||||| |||||||||||||||||||||||||    
T  41365046 ccaaggtgtttacaatgtttcccaacccaaaagaactctaat-caaagaccctcaaccctaaagttacctcatttg 41365120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 3303878 - 3303943
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||||||||||| |||||||||||  | | ||||||| ||||||| |||||||||||| ||||    
T  3303878 ttacaatgtttcccaacccaagagaaccctaat-caaagaccctcaaccgtaaagttacctcctttg 3303943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 4162460 - 4162400
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctc 97  Q
    ||||||||||| |||| |||||||||||  | | ||||||| ||||||||||||||||||||    
T  4162460 ttacaatgttttccaacccaagagaaccctaat-caaagaccctcaaccctaaagttacctc 4162400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 19491906 - 19491974
Alignment:
Q  36 ttacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||| ||||||||||| ||  ||||||||| ||||||| |  |||||||||||||||||||||| ||||    
T  19491906 ttacgatgtttcccaaccctcaagagaacctcactacacatgcactcaaccctaaagttacctcctttg 19491974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 1292704 - 1292736
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttg 102  Q
    ||||||| |||||||||||||||||||||||||    
T  1292704 caaagaccctcaaccctaaagttacctcatttg 1292736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 33528516 - 33528386
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||| ||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  33528516 tccttccaatggtgaaatctcactacccaatgtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 33528417  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  33528416 tgtaat-ccaagtttctctctcttcaagctct 33528386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 40015130 - 40015260
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||||| ||||| ||  |||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||||| ||    
T  40015130 tccttccaatggtgaaatctcactatccaatgtgtttacaatgtttcccaacccaagagaacctcaatacaaa-acactcaaccctaaagttacctcctt 40015228  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    ||||| || |||||||||  ||||||||||||    
T  40015229 tgtaaacctaaatttctctctcttcaagctct 40015260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 28259069 - 28258936
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  ||||| |  |||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| ||    
T  28259069 tccttccaatggtgaaatctcactacccaagatgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagttacctcctt 28258970  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttct 135  Q
    |||||| |||| ||||||  |||||||||||||||    
T  28258969 tgtaat-ccaagtttctctctcttcaagctcttct 28258936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36757654 - 36757549
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  36757654 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 36757555  T
Q  101 tgtaat 106  Q
    ||||||    
T  36757554 tgtaat 36757549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 15903779 - 15903651
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    ||||||||||||||||||| | ||||| ||  ||||||||||||| || ||||||||||| ||||||||||||| ||||||| || ||||||||||||||    
T  15903779 ttccaatggtgaaatctcattatccaatgtgtttacaatgtttcctaacccaagagaacctcactacaaagacattcaacccaaaggttacctcatttgt 15903680  T
Q  104 aatcccaaatttctcattcttcaagctct 132  Q
    || ||||||||||||  ||||||||||||    
T  15903679 aaacccaaatttctctctcttcaagctct 15903651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13569534 - 13569641
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||||| ||||||||  ||| |||||||||||| |||||||| || ||||||||||||||| ||||||||||||| ||||||    
T  13569534 tccttccaatggtgaaatctcactatccaaggtgtttataatgtttcccaacccaagagatcctcactacaaagacacttaaccctaaagttatctcatt 13569633  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  13569634 tgtaatcc 13569641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21630150 - 21630257
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||| ||||||||||||| ||    
T  21630150 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaacactaaagttacctcctt 21630249  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  21630250 tgtaatcc 21630257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34389056 - 34389163
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||| ||    
T  34389056 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacacacaaccctaaagttacctcctt 34389155  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  34389156 tgtaatcc 34389163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10445359 - 10445253
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| || |||||||| ||||||||||||| ||||||||||||||||||| ||    
T  10445359 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccgagagaacctcactacaaagacattcaaccctaaagttacctcctt 10445260  T
Q  101 tgtaatc 107  Q
    |||||||    
T  10445259 tgtaatc 10445253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 14698901 - 14698794
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||| |||||||||||||  |||||||  |||||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||| ||    
T  14698901 tccttccaatagtgaaatctcactacccaaggtgtttacaatgtttcccaacccgagagatcctcactacaaagacactcaaccctaaagttacctcctt 14698802  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  14698801 tgtaatcc 14698794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33118340 - 33118447
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||| |||||||||||  |||||||  |||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  33118340 tccttccaatggcgaaatctcactacccaaggtgtttacaatgttccccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 33118439  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  33118440 tgtaatcc 33118447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31056248 - 31056367
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||| ||||||||||||||||||  |||||||  |||||||||||||||| ||  ||||||||| |||||||||||||||||||||| ||||||||||     
T  31056248 tcctttcaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcc 31056347  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| |||||| ||||||    
T  31056348 tttgtattcccaagtttctc 31056367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2837922 - 2837816
Alignment:
Q  1 tccttccaatggtgaaat-ctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctc 97  Q
    |||||||||||||||||| |||||| ||||||||  |||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||    
T  2837922 tccttccaatggtgaaattctcactatccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctc 2837823  T
Q  98 atttgta 104  Q
     ||||||    
T  2837822 ctttgta 2837816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 35397714 - 35397817
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||| |||  |||||| ||||||||||||| ||||||||||||| ||||| ||    
T  35397714 tccttccaatggtgaaatctcactacccaaggtaattacaatgttttccaacccagaagaacctcactacaaagacaatcaaccctaaagtgacctcctt 35397813  T
Q  101 tgta 104  Q
    ||||    
T  35397814 tgta 35397817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40739039 - 40739146
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||| |  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| |||| ||    
T  40739039 tccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctt 40739138  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  40739139 tgtaatcc 40739146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 8040269 - 8040388
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||  ||||||||  |||||||||||||||||||| ||||||||||||     
T  8040269 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacttcactacaaagacactcaaccataaagttacctcc 8040368  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| | |||| ||||||    
T  8040369 tttgtattaccaagtttctc 8040388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 17865421 - 17865517
Alignment:
Q  12 gtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcc 108  Q
    |||||||||||||  |||||||  |||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||| ||||||||||    
T  17865421 gtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcttcactacaaagacactcaaccctaaagttacctcctttgtaatcc 17865517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 34682225 - 34682106
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaa-tc-caagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    |||||| | |||||||||||||||  |||||||  ||||||||||| |||| || |||||||||| |||||||||||||||||||||||||||||||||     
T  34682225 tccttcaagtggtgaaatctcactacccaaggtgtttacaatgttttccaactctcaagagaacctcactacaaagacactcaaccctaaagttacctcc 34682126  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| |||||| ||||||    
T  34682125 tttgtattcccaagtttctc 34682106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 8390039 - 8389934
Alignment:
Q  3 cttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    ||||||||||| |||||||||| ||||||||  ||||||||||||| || |||||||| |  |||||||||||| |||||||||||||||| ||| ||||    
T  8390039 cttccaatggtaaaatctcactatccaaggtgtttacaatgtttcctaacccaagagatcatcactacaaagaccctcaaccctaaagttatctcctttg 8389940  T
Q  103 taatcc 108  Q
    ||||||    
T  8389939 taatcc 8389934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 20522434 - 20522533
Alignment:
Q  8 aatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatc 107  Q
    |||||||||||||||||  ||||| |  |||||||| ||||||| ||||||||  | ||||||||||||||||||||||||||||||||| |||||||||    
T  20522434 aatggtgaaatctcactacccaagttgtttacaatgcttcccaacccaagagatactcactacaaagacactcaaccctaaagttacctcctttgtaatc 20522533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23078363 - 23078256
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||| ||||||||||||  |||||||  |||||||||||||||| ||||||||  | ||  ||||||||||||||||| ||||||||||| ||    
T  23078363 tccttccaatgatgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagattctcatcacaaagacactcaacccaaaagttacctcctt 23078264  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  23078263 tgtaatcc 23078256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 39483141 - 39483230
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagtta 93  Q
    |||||||||||||||||||||  |||||||  ||||||| |||||||| |||||||| || ||| |||||||||||||||||||||||||    
T  39483141 ttccaatggtgaaatctcactacccaaggtgtttacaatatttcccaacccaagagatcctcacaacaaagacactcaaccctaaagtta 39483230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 1344435 - 1344333
Alignment:
Q  4 ttccaatggtgaaat-ctcactgtccaaggtaattacaatgtttcccaatc-caagagaaccacactacaaagacactcaaccctaaagttacctcattt 101  Q
    ||||||||||||||| ||||||  | ||| |  |||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  1344435 ttccaatggtgaaattctcactaccgaagatgtttacaatgtttcccaacctcaagagaacctcactacaaagacactcaaccctaaaattacctcattt 1344336  T
Q  102 gta 104  Q
    |||    
T  1344335 gta 1344333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10707144 - 10707038
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||| ||||||||||||| |||  |||||||  |||||||||||| ||| |||||||| || ||||||||||| | | ||||||||||||||||| ||    
T  10707144 tccttctaatggtgaaatctaactacccaaggtgtttacaatgtttctcaacccaagagatcctcactacaaagataataaaccctaaagttacctcctt 10707045  T
Q  101 tgtaatc 107  Q
    |||||||    
T  10707044 tgtaatc 10707038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 2869582 - 2869481
Alignment:
Q  3 cttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||||| |||||||||||  |||| ||  ||||||||||| ||||  |||||||||| |||||||||||||||||||| |||||||| ||| ||||    
T  2869582 cttccaatggcgaaatctcactacccaatgtgtttacaatgttttccaactcaagagaacctcactacaaagacactcaaccgtaaagttatctcctttg 2869483  T
Q  103 ta 104  Q
    ||    
T  2869482 ta 2869481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 42269609 - 42269693
Alignment:
Q  36 ttacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctc 118  Q
    |||||||||||||||| ||  ||||||||| |||||||||||||||||||| |||||||||||| |||||| |||||| ||||||    
T  42269609 ttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccttaaagttacctcctttgtattcccaagtttctc 42269693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3491957 - 3492066
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttc--ccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    |||||||||||||| |||||||||  |||||||  |||||||||||   |||| |||||||| || ||||||||||||||||||||||| | || ||||     
T  3491957 tccttccaatggtggaatctcactacccaaggtgtttacaatgttttttccaacccaagagatcctcactacaaagacactcaaccctagatttccctcc 3492056  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  3492057 tttgtaatcc 3492066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 25409842 - 25409945
Alignment:
Q  7 caatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgta 104  Q
    ||||||||||||||||||  |||||||  |||||||||||  ||||| |||||||| || | |||||||||||||||||||||  ||| |||| | ||||    
T  25409842 caatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagtgttccctcctctgta 25409941  T
Q  105 atcc 108  Q
    ||||    
T  25409942 atcc 25409945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 11690470 - 11690396
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||  |||||||||||||||| |||||||||| | | | ||||||| |||||||||||||||||||| ||||    
T  11690470 ccaaggtgtttacaatgtttcccaacccaagagaactataat-caaagaccctcaaccctaaagttacctcctttg 11690396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 38312199 - 38312105
Alignment:
Q  37 tacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctct 132  Q
    ||||||||||||||| ||||||||||   | | ||||||  |||||||||||||||||||| ||||   |||||||||||||  ||||||||||||    
T  38312199 tacaatgtttcccaacccaagagaactctaat-caaagaacctcaaccctaaagttacctcctttgatttcccaaatttctctctcttcaagctct 38312105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 3278217 - 3278307
Alignment:
Q  13 tgaaatctcactgtccaaggtaattacaa-tgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||||||| ||||||||  |||||| ||||| |||| ||||||||| | | |  ||| || ||||||||||||||||||||||||||    
T  3278217 tgaaatctcactatccaaggtgtttacaaatgttttccaacccaagagaatctctcatcaacgatactcaaccctaaagttacctcatttg 3278307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 36988274 - 36988378
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  |||| ||||||||||| ||||||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||    
T  36988274 ccaaggtgtttactatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttca 36988372  T
Q  127 agctct 132  Q
    ||||||    
T  36988373 agctct 36988378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 6595247 - 6595309
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctct 132  Q
    ||||||| |||||||||||||||||||||||||   ||| || ||||||  ||||||||||||    
T  6595247 caaagaccctcaaccctaaagttacctcatttgatttcctaagtttctctctcttcaagctct 6595309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 41586429 - 41586344
Alignment:
Q  15 aaatctcactgtccaaggtaattacaa-tgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcat 99  Q
    ||||||||||  |||||||  |||||| ||||| |||| ||||||||| | | |  ||||||||||||||||||||||||| ||||    
T  41586429 aaatctcactacccaaggtgtttacaactgttttccaacccaagagaagctctcaccaaagacactcaaccctaaagttacatcat 41586344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 11098788 - 11098705
Alignment:
Q  27 ccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcc 108  Q
    ||||||| ||||||||||||  ||||| ||||||||  | | ||||||||||||||||||||   ||| |||| ||||||||||    
T  11098788 ccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatcc 11098705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3281912 - 3282019
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || |||||||||||||||||||| |||||||||||||||    
T  3281912 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccataaagttacctcatt 3282011  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  3282012 tgtaatcc 3282019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 47098717 - 47098610
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||    
T  47098717 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcgctacaaagacactcaaccctaaagttacctcctt 47098618  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  47098617 tgtaatcc 47098610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 47102731 - 47102624
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||| ||||||||||||  |||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  47102731 tccttccaatgatgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctt 47102632  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  47102631 tgtaatcc 47102624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19073133 - 19073252
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| ||  ||||||||| |||||||||||||||||||||| ||||||||||     
T  19073133 tccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcc 19073232  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| |||||| ||||||    
T  19073233 tttgtattcccaagtttctc 19073252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19121023 - 19121142
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| ||  ||||||||| |||||||||||||||||||||| ||||||||||     
T  19121023 tccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcc 19121122  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| |||||| ||||||    
T  19121123 tttgtattcccaagtttctc 19121142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 13598605 - 13598735
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||| |||| |||||||| || |||||||||||||||||||| |||||||||||| ||    
T  13598605 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcactacaaagacactcaaccataaagttacctcctt 13598704  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  13598705 tgtaat-ccaattttctctctcttcaagctct 13598735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29652018 - 29652125
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||| ||| || ||||||||||||||||||||||||||||||||| ||    
T  29652018 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacactcaaccctaaagttacctcctt 29652117  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  29652118 tgtaatcc 29652125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37069972 - 37070079
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||| | ||||||||  |||||||||||||||| |||||||| || |||||||||||||||||||| |||||||||||| ||    
T  37069972 tccttccaatggtgaaatctcattatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccataaagttacctcctt 37070071  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  37070072 tgtaatcc 37070079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 13604514 - 13604375
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||| |||||||||||||||| |||| ||    
T  13604514 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagatactcaaccctaaagttccctcctt 13604415  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaa 141  Q
    |||||| |||| ||||||  |||| ||||||| ||| ||||    
T  13604414 tgtaat-ccaagtttctctctctttaagctctcctccaaaa 13604375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40816708 - 40816589
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||  ||||||||| |||||||||||||||||||||| ||||||||||     
T  40816708 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcc 40816609  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| |||||| ||||||    
T  40816608 tttgtattcccaagtttctc 40816589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 32889644 - 32889750
Alignment:
Q  2 ccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcattt 101  Q
    |||||||||||||||||||||||  |||||||  |||||||||||||||| |||| | |||| ||||||||||||||||||||||||||||||||| |||    
T  32889644 ccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaaaaacctcactacaaagacactcaaccctaaagttacctccttt 32889743  T
Q  102 gtaatcc 108  Q
    | |||||    
T  32889744 gcaatcc 32889750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22819636 - 22819753
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||| | |||  |||||||  |||||||||||||||| ||||||||||| ||||||||||||||| || |||||||||||||| ||    
T  22819636 tccttccaatggtgaaatgtaactacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactaaatcctaaagttacctcctt 22819735  T
Q  101 tgtaatcccaaatttctc 118  Q
    ||||| ||||| ||||||    
T  22819736 tgtaaacccaagtttctc 22819753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 47703824 - 47703708
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctcattt 101  Q
    |||||||||||||||||||||  |||||||  |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||| |||    
T  47703824 ttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctccttt 47703725  T
Q  102 gtaatcccaaatttctc 118  Q
    ||| || ||| ||||||    
T  47703724 gtattctcaagtttctc 47703708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21536462 - 21536355
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||| |||  |||||||  ||||||||||| |||| | |||||| || ||||||||||||||||||||||||||||||||| ||    
T  21536462 tccttccaatggtgaaatcttactacccaaggtgtttacaatgttttccaacctaagagatcctcactacaaagacactcaaccctaaagttacctcctt 21536363  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  21536362 tgtaatcc 21536355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 27104291 - 27104187
Alignment:
Q  3 cttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    ||||||||||||||||||||||  |||||||  ||| |||||||||||| |||||||| || |||||||||||||||||||| |||||||||||| ||||    
T  27104291 cttccaatggtgaaatctcactacccaaggtgcttataatgtttcccaacccaagaga-cctcactacaaagacactcaaccttaaagttacctcctttg 27104193  T
Q  103 taatcc 108  Q
    ||||||    
T  27104192 taatcc 27104187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9476467 - 9476574
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||| |||||||||||||||||  ||||| |  |||||||||||||||| | ||||||||| ||||||||||||| ||||||| ||||||||||| ||    
T  9476467 tccttcaaatggtgaaatctcactacccaagatgtttacaatgtttcccaaccaaagagaacctcactacaaagacattcaacccaaaagttacctcctt 9476566  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  9476567 tgtaatcc 9476574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19361322 - 19361215
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt-cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcat 99  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||| ||||| |||||||| || ||||||||||||||||||||||| |||| |||| |    
T  19361322 tccttccaatggtgaaatctcactacccaaggtgtttacaatgttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcct 19361223  T
Q  100 ttgtaatc 107  Q
    ||||||||    
T  19361222 ttgtaatc 19361215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19358733 - 19358625
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt-cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcat 99  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||| ||||| |||| ||| || ||||||||||||||||||||||| |||| |||| |    
T  19358733 tccttccaatggtgaaatctcactacccaaggtgtttacaatgttttcccaacccaaaagatcctcactacaaagacactcaaccctagagttccctcct 19358634  T
Q  100 ttgtaatcc 108  Q
    |||||||||    
T  19358633 ttgtaatcc 19358625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 9022798 - 9022668
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||    |||||  |||||||||||| ||| ||||||||||| ||||||||||||| |||| || |||| |||||| ||    
T  9022798 tccttccaatggtgaaatctcactacgaaaggtgtttacaatgtttctcaacccaagagaacctcactacaaagacattcaa-ccaaaagatacctcctt 9022700  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    ||||| ||||| ||||||  ||||||||||||    
T  9022699 tgtaaacccaagtttctctctcttcaagctct 9022668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26644790 - 26644683
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||   ||||||  |||||||||||||||| |||| ||| |  ||||||||||||||||||||||||| ||| ||| ||    
T  26644790 tccttccaatggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaaaagatcttcactacaaagacactcaaccctaaaattatctcctt 26644691  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  26644690 tgtaatcc 26644683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19366198 - 19366089
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  ||||||| |||  ||||| |||||||| || ||||||||||||||||||||||| |||| ||||     
T  19366198 tccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcc 19366099  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  19366098 tttgtaatcc 19366089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24202659 - 24202550
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||| ||||||||  ||||||| ||||||||||||  ||||| ||||||||  | | |||||||||||||||||||||||||| ||||     
T  24202659 tccttccaatggtgagatctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttccctcc 24202560  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  24202559 tttgtaatcc 24202550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16124406 - 16124347
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagaga 60  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||||||||    
T  16124406 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagaga 16124347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 10925192 - 10925088
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  |||||||||||||||| |||||||||| | | | ||||||| |||||||||||||||||||| ||||   | |||| ||||||  ||||||    
T  10925192 ccaaggtgtttacaatgtttcccaacccaagagaactataat-caaagaccctcaaccctaaagttacctcctttgattttccaagtttctctctcttca 10925094  T
Q  127 agctct 132  Q
    ||||||    
T  10925093 agctct 10925088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 17345414 - 17345350
Alignment:
Q  40 aatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgta 104  Q
    |||||||| |||  |||||||||| |||||||||||||||||||||||||  |||||| ||||||    
T  17345414 aatgtttctcaactcaagagaacctcactacaaagacactcaaccctaaatgtacctcctttgta 17345350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 31659207 - 31659094
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  ||||||||||||| || ||||||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||    
T  31659207 ccaaggtgtttacaatgtttccgaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttca 31659109  T
Q  127 agctct-tctcaaaa 140  Q
    |||||| ||||||||    
T  31659108 agctctctctcaaaa 31659094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 28223632 - 28223723
Alignment:
Q  39 caatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctc 131  Q
    ||||||||||||| ||||||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  |||||||||||    
T  28223632 caatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctc 28223723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 13138173 - 13138247
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||  |||||||||||||||  |||||||||||  | | ||||||| |||||||||||||||||||| ||||    
T  13138173 ccaaggtgtttacaatgtttcccaccccaagagaaccctaat-caaagaccctcaaccctaaagttacctcctttg 13138247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 50169409 - 50169483
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||||||| |||||||||||||||| |||||| ||||  | || ||| || |||||||||||||||||||| ||||    
T  50169409 ccaaggtatttacaatgtttcccaacccaagataaccctaata-aaaaaccctcaaccctaaagttacctcctttg 50169483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 4552836 - 4552905
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctc 97  Q
    |||||||  |||||||||||| ||| ||||||||||| || |  |||||| ||||||||||||||||||||    
T  4552836 ccaaggtgtttacaatgtttctcaacccaagagaacctcaatt-aaagaccctcaaccctaaagttacctc 4552905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19379962 - 19379917
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt 46  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||    
T  19379962 tccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 19379917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 28220467 - 28220528
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctc 131  Q
    ||||||| |||||||||||||||||||| ||||   |||||| ||||||  |||||||||||    
T  28220467 caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctc 28220528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 41360875 - 41360807
Alignment:
Q  36 ttacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctcatttg 102  Q
    |||| ||||||||||| ||  ||||||||| ||||||| |  |||||||||||||||||||||| ||||    
T  41360875 ttacgatgtttcccaaccctcaagagaacctcactacacatgcactcaaccctaaagttacctcctttg 41360807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 28265807 - 28265879
Alignment:
Q  70 caaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctcttctcaaaaaa 142  Q
    ||||||| |||||||||||||||||||| ||||   |||| | ||||||  |||| ||||||||| |||||||    
T  28265807 caaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctcttcccaaaaaa 28265879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 8309 - 8166
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || |||||||||||||||||||||||||||| |||| ||    
T  8309 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctt 8210  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaaactg 145  Q
    |||||| |||| ||||||  ||||| |||||| |||  |||||||    
T  8209 tgtaat-ccaagtttctctctcttccagctctcctccgaaaactg 8166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 85888 - 85995
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||| ||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| ||    
T  85888 tccttccaatggtgaaatctcactacccaaagtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 85987  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  85988 tgtaatcc 85995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 72; Significance: 6e-33; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 5890 - 6020
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||| |||| |||||||| || |||||||||||||||||||| |||||||||||| ||    
T  5890 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcactacaaagacactcaaccataaagttacctcctt 5989  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    |||||| |||| ||||||  ||||||||||||    
T  5990 tgtaat-ccaattttctctctcttcaagctct 6020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 133171 - 133032
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| || ||||||||||| |||||||||||||||| |||| ||    
T  133171 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaactcaaccctaaagttccctcctt 133072  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaa 141  Q
    |||||| |||| ||||||  |||| ||||||| ||| ||||    
T  133071 tgtaat-ccaagtttctctctctttaagctctcctccaaaa 133032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 2699 - 2828
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||   ||||||  |||||||||||||||| |||||||| || ||||||||||| ||| ||||||||||||||||  ||    
T  2699 tccttccaatggtgaaatctcactacgcaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaacttaaccctaaagttaccttttt 2798  T
Q  101 tgtaatcccaaatttctcattcttcaagctct 132  Q
    ||||||||  ||||||||  ||||||||||||    
T  2799 tgtaatcc--aatttctctctcttcaagctct 2828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 6e-33; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22709215 - 22709322
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| |||| ||    
T  22709215 tccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctt 22709314  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  22709315 tgtaatcc 22709322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22963904 - 22964010
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||    
T  22963904 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagctcttt 22964003  T
Q  101 tgtaatc 107  Q
    |||||||    
T  22964004 tgtaatc 22964010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23824489 - 23824383
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||    
T  23824489 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagctcttt 23824390  T
Q  101 tgtaatc 107  Q
    |||||||    
T  23824389 tgtaatc 23824383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 5757370 - 5757231
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||||||| ||  | |||||||||||||||||||||||||||||| ||    
T  5757370 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctaaatacaaagacactcaaccctaaagttacctcctt 5757271  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttctcaaaaa 141  Q
    |||||| |||| ||||||  ||||| |||||| ||| ||||    
T  5757270 tgtaat-ccaagtttctctctcttccagctctcctccaaaa 5757231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5017388 - 5017281
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||| |  |||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||| ||    
T  5017388 tccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcgtt 5017289  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  5017288 tgtaatcc 5017281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31936780 - 31936887
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| |||| ||| || ||||||||||||||||||||||||||||||||| ||    
T  31936780 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctt 31936879  T
Q  101 tgtaatcc 108  Q
    || |||||    
T  31936880 tgcaatcc 31936887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31979717 - 31979818
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||||||| ||    
T  31979717 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctcaacccaaaagaacctcactacaaagacactcaaccctaaagttacctcctt 31979816  T
Q  101 tg 102  Q
    ||    
T  31979817 tg 31979818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24435863 - 24435757
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||| ||| ||    
T  24435863 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagagaacctcac-acaaagacactcaaccctaaagttatctcctt 24435765  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  24435764 tgtaatcc 24435757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 5572132 - 5572028
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    ||||||| |||||||||||||  |||||||  |||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||  ||||    
T  5572132 ttccaatagtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatccccactacaaagacacccaaccctaaagttacctccattgt 5572033  T
Q  104 aatcc 108  Q
    |||||    
T  5572032 aatcc 5572028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31086366 - 31086259
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||||||||||||||||||||   |||||||  |||||||||||| ||| | |||||| || ||||||||||||||||||||||||||||||| | ||    
T  31086366 tccttccaatggtgaaatctcacaacccaaggtgtttacaatgtttctcaacctaagagatcctcactacaaagacactcaaccctaaagttaccccctt 31086267  T
Q  101 tgtaatcc 108  Q
    ||||||||    
T  31086266 tgtaatcc 31086259  T

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Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21801236 - 21801117
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||| ||||||||||||  |||||||  |||||||||||||||| ||  ||||||||| |||||||||||||||||||||| |||||||||      
T  21801236 tccttccaatgttgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctgc 21801137  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| || ||| ||||||    
T  21801136 tttgtattctcaagtttctc 21801117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 14521878 - 14521984
Alignment:
Q  1 tccttccaatggtgaaat-ctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctc 97  Q
    |||||||||||||||||| ||||||  |||||||  |||||||||||||||| ||  |||||||||  |||||||||||| | |||||||||||||||||    
T  14521878 tccttccaatggtgaaattctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctaactacaaagacattaaaccctaaagttacctc 14521977  T
Q  98 atttgta 104  Q
    |||||||    
T  14521978 atttgta 14521984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 21272846 - 21272775
Alignment:
Q  36 ttacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatc 107  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  21272846 ttacaatgtttcgcaacccaagagaacctcactacaaagacactcaaccctaaagttaccccctttgtaatc 21272775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 18234334 - 18234431
Alignment:
Q  47 cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctcttctcaaaaaactg 145  Q
    ||||| |||||||| || |||||||||||||||||||||||||| |||||| |||||||| |||| |||||   |||||||||||| ||  ||||||||    
T  18234334 cccaacccaagagatcctcactacaaagacactcaaccctaaagctacctcctttgtaat-ccaagtttctttctcttcaagctctccttcaaaaactg 18234431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 31076825 - 31076712
Alignment:
Q  4 ttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgt 103  Q
    ||||||||||||||||||| |  | |||||  |||||| ||||| ||| |||||  |||  ||||||||||||||||||||||| ||||| ||| |||||    
T  31076825 ttccaatggtgaaatctcaatacctaaggtgtttacaaagtttctcaacccaaggcaacgtcactacaaagacactcaaccctatagttatctcctttgt 31076726  T
Q  104 aatcccaaatttct 117  Q
    | |||||| |||||    
T  31076725 attcccaagtttct 31076712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 10077019 - 10076976
Alignment:
Q  65 cactacaaagacactcaaccctaaagttacctcatttgtaatcc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  10077019 cactacaaagacactcaaccctaaagttacctcctttgtaatcc 10076976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 21356244 - 21356318
Alignment:
Q  3 cttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagaca 77  Q
    ||||||||| ||||||||||||  |||||||  ||||||||||||| || |||||||| || |||||||||||||    
T  21356244 cttccaatgatgaaatctcactacccaaggtgtttacaatgtttcctaacccaagagatcctcactacaaagaca 21356318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5674658 - 5674548
Alignment:
Q  1 tccttccaatggtgaaatc-tcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctc 97  Q
    |||||||||||||||| || |||||  ||||||| ||||||||||||  ||||| ||||||||  | | ||||||||||||||||||||   ||| ||||    
T  5674658 tccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctc 5674559  T
Q  98 atttgtaatcc 108  Q
     ||||||||||    
T  5674558 ctttgtaatcc 5674548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18233051 - 18233102
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaat 52  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||||    
T  18233051 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaat 18233102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 23896628 - 23896690
Alignment:
Q  72 aagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctcttct 135  Q
    |||||||||||| ||||||||||||| |||||||| |||| ||||||  |||||||||||||||    
T  23896628 aagacactcaactctaaagttacctcctttgtaat-ccaagtttctctctcttcaagctcttct 23896690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 9183230 - 9183334
Alignment:
Q  27 ccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttca 126  Q
    |||||||  |||||||||||||||| ||| ||||||   | | ||||||| |||||||||||||||||||| ||||   |||||| ||||||  ||||||    
T  9183230 ccaaggtgtttacaatgtttcccaacccaggagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttca 9183328  T
Q  127 agctct 132  Q
    ||||||    
T  9183329 agctct 9183334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 45403 - 45535
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactac-aaagacactcaaccctaaagttacctcat 99  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||| ||| |||||||| || |||||| ||||||| ||||||||||||||||||| |    
T  45403 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcacaacccaagagatcctcactacaaaagacattcaaccctaaagttacctcct 45502  T
Q  100 ttgtaatcccaaatttctcattcttcaagctctt 133  Q
    ||||||| |||| ||||||  |||||||||||||    
T  45503 ttgtaat-ccaagtttctctctcttcaagctctt 45535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 10936 - 11055
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatcc--aagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  |||||||  |||||||||||||||| ||  ||||||||| |||||||||||||||||||| ||||||||||||     
T  10936 tccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccataaagttacctcc 11035  T
Q  99 tttgtaatcccaaatttctc 118  Q
    |||||| ||| || ||||||    
T  11036 tttgtattccaaagtttctc 11055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17842 - 17733
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||  ||||| |||||||| || | ||||||||||||||||||||| |||| ||||     
T  17842 tccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcc 17743  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  17742 tttgtaatcc 17733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23935 - 23826
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgttt--cccaatccaagagaaccacactacaaagacactcaaccctaaagttacctca 98  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||  ||||| |||||||| || | ||||||||||||||||||||| |||| ||||     
T  23935 tccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcc 23836  T
Q  99 tttgtaatcc 108  Q
    ||||||||||    
T  23835 tttgtaatcc 23826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 17466 - 17563
Alignment:
Q  11 ggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatttgtaatcc 108  Q
    ||||||||||||||  |||||||  ||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||||| | ||||||||    
T  17466 ggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatctccactacaaagacactcaaccgtaaagttacctcctatgtaatcc 17563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 23737 - 23887
Alignment:
Q  1 tccttccaatggtgaaatctcactgtccaaggtaattacaatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagttacctcatt 100  Q
    |||||| |||||||| ||||||||  ||||||| |||||||| ||| |||| |||| |||||| ||||| |||||| ||||||| ||||||||||||  |    
T  23737 tccttctaatggtgacatctcactacccaaggtgattacaattttttccaacccaatagaacctcactataaagacgctcaaccttaaagttacctccat 23836  T
Q  101 tgtaatcccaaatttctcattcttcaagctcttc-tcaaaaaactgaattg 150  Q
    ||||||| ||| ||||||  |||| ||| ||||| |||||||| |||||||    
T  23837 tgtaatctcaagtttctctctcttaaagatcttcttcaaaaaaatgaattg 23887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 5794 - 5745
Alignment:
Q  55 aagagaaccacactacaaagacactcaaccctaaagttacctcatttgta 104  Q
    ||||||||| |||||||||||||||||||||| |||||||||| ||||||    
T  5794 aagagaacctcactacaaagacactcaaccctcaagttacctcctttgta 5745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 33421 - 33368
Alignment:
Q  40 aatgtttcccaatccaagagaaccacactacaaagacactcaaccctaaagtta 93  Q
    ||||||| |||| |||||||| |  ||||||||||||| |||||||||||||||    
T  33421 aatgttttccaacccaagagatcgtcactacaaagacattcaaccctaaagtta 33368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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