View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14706_high_35 (Length: 226)
Name: NF14706_high_35
Description: NF14706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14706_high_35 |
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Alignment Details
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 37241262 - 37241122
Alignment:
| Q |
6 |
attaatatgggtcaagactcaagaggcaagatactagtgatcagcttaatgtatgaggaggtatacagtgtggtgaagcctcaatattatcgttattgca |
105 |
Q |
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| T |
37241262 |
attaatatgggtcaagacttaagaggcaagatactagtgattagcttaatgtatgaggaggtatacggtgtggtgaagcctcaatattatcgttattgca |
37241163 |
T |
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| Q |
106 |
gctcaaaatacaaatgtacataagcttgtctatttataaat |
146 |
Q |
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|||||||||||||||||||||||| |||||||||||||||| |
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| T |
37241162 |
gctcaaaatacaaatgtacataagtttgtctatttataaat |
37241122 |
T |
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